Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007062

Physical Location & Seq

Genomic Coordinates Forward (+)

9531809 .. 9534141

Gene Structure 2333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G27450.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 732 bp

ATGCAAACAATAATAATTTCTCCACTTGTTTCTCATCGTCTCTGTCTTGCTCGTGCTGTTCCTTGCAACCGTCTTCTCAACAACCACCACCGTGCTCCTCCTTCGATCCGCCTCTCAAACCACCGTTCAACCACCTCACTCCGCCTCTTCTCCTCCGCCGCAGCCAGTCGGGACAGTGAAATGGCGACTGAAGATGTGCAAGATCCCAGAATCGCTAAGATTGCCTCTTCCATTAGAGTCATCCCCGACTTCCCTAAACCAGGAATCATGTTTCAGGACATAACGACGCTTCTTCTCGACACTGAGGCCTTTAAGGATACTATTGCTTTGTTTGTTGATAGATACAAAGATAAAGGCATATCTGTTGTTGCAGGTGTTGAAGCTAGAGGTTTCATTTTTGGCCCTCCTATTGCGTTGGCTATTGGTGCCAAATTTGTTCCCATGAGGAAGCCCAAGAAGCTACCTGGGAAGGTTATTTCGGAGGAGTATTCGTTGGAGTATGGAACAGATACGATTGAGATGCACGTAGGTGCAGTAGAGCCTGGTGAGCGTGCTATTATTATTGATGACCTCATTGCCACGGGTGGGACTCTCGCTGCTGCAATCCGACTACTTGAACGAGTAGGAGTGAAGATTGTTGAATGTGCTTGCGTAATTGAGTTACCAGAGCTTAAGGGAAAGGAGAAACTAGGAGAGACGTCGCTATTTGTTCTTGTAAAGTCGGCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003999 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006163 GO:0006164 GO:0006167 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009308 GO:0009507 GO:0009536 GO:0009690 GO:0009987 GO:0010817 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032261 GO:0034641 GO:0034654 GO:0034754 GO:0042445 GO:0043094 GO:0043101 GO:0043173 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044209 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046390 GO:0046483 GO:0055086 GO:0065007 GO:0065008 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 map00230 map01100

Pfam Domains

Protein Families

Pribosyltran

Protein Analysis

243

Amino Acids

26.4

Weight (kDa)

8.66

Isoelectric Point (pI)

28.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pribosyltran	PF00156	47 - 169	7.2e-18	Phosphoribosyl transferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007062)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27450 AT1G27450 AT1G27450 AT1G27450
fragaria_vesca	FvH4_2g33240 FvH4_2g33240 FvH4_2g33240
malus_domestica	MD08G1086300.v1.1 MD08G1086400.v1.1 MD15G1071300.v1.1
prunus_persica	Prupe.1G424200_v2.0.a1 Prupe.1G424200_v2.0.a1 Prupe.1G424200_v2.0.a1
pyrus_communis	pycom08g07090 pycom15g06710
rosa_chinensis	RchiOBHm_Chr6g0309401
rosa_laevigata	RLG00000010569
rosa_multiflora	Rmu_sc0012466.1_g000005 Rmu_sc0017306.1_g000002
rosa_roxburghii	Rroxscaffold_7G00159430
rosa_rugosa	Rorug06G0371900
rosa_samantha	Rh6BG494200 Rh6CG499200 Rh6DG485400
rosa_wichuraiana	Rw6G042240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	362
AatII	GACGTC	1 cut(s)	701
Acc36I	ACCTGC	1 cut(s)	362
AccB1I	GGYRCC	1 cut(s)	425
AciI	CCGC	4 cut(s)	109, 142, 156, 159
AclWI	GGATC	2 cut(s)	100, 197
AcsI	RAATTY	1 cut(s)	431
AcuI	CTGAAG	1 cut(s)	210
AcyI	GRCGYC	1 cut(s)	698
AfiI	CCNNNNNNNGG	2 cut(s)	260, 585
AflII	CTTAAG	1 cut(s)	671
AgsI	TTSAA	4 cut(s)	129, 380, 617, 641
AjnI	CCWGG	3 cut(s)	259, 463, 541
AleI	CACNNNNGTG	2 cut(s)	90, 528
AluBI	AGCT	3 cut(s)	383, 460, 670
AluI	AGCT	3 cut(s)	383, 460, 670
Alw21I	GWGCWC	1 cut(s)	97
Alw26I	GTCTC	2 cut(s)	44, 689
AlwI	GGATC	2 cut(s)	100, 197
AoxI	GGCC	2 cut(s)	306, 400
ApeKI	GCWGC	4 cut(s)	161, 596, 599, 725
ApoI	RAATTY	1 cut(s)	431
AspS9I	GGNCC	1 cut(s)	401
AsuHPI	GGTGA	1 cut(s)	557
BanI	GGYRCC	1 cut(s)	425
BauI	CACGAG	1 cut(s)	51
BbsI	GAAGAC	1 cut(s)	65
Bbv12I	GWGCWC	1 cut(s)	97
BbvI	GCAGC	4 cut(s)	173, 583, 586, 712
BcgI	CGANNNNNNTGC	2 cut(s)	502, 536
BciT130I	CCWGG	3 cut(s)	261, 465, 543
BciVI	GTATCC	1 cut(s)	310
BcoDI	GTCTC	2 cut(s)	44, 689
BfaI	CTAG	2 cut(s)	384, 689
BfrI	CTTAAG	1 cut(s)	671
BfuAI	ACCTGC	1 cut(s)	362
BfuI	GTATCC	1 cut(s)	310
BisI	GCNGC	5 cut(s)	159, 162, 597, 600, 726
BlsI	GCNGC	5 cut(s)	160, 163, 598, 601, 727
Bme1390I	CCNGG	3 cut(s)	261, 465, 543
BmgT120I	GGNCC	1 cut(s)	401
BmiI	GGNNCC	1 cut(s)	427
BmrFI	CCNGG	3 cut(s)	261, 465, 543
BmsI	GCATC	1 cut(s)	510
BpiI	GAAGAC	1 cut(s)	65
BsaAI	YACGTR	1 cut(s)	526
BsaHI	GRCGYC	1 cut(s)	698
BsaJI	CCNNGG	2 cut(s)	464, 579
BsaXI	ACNNNNNCTCC	2 cut(s)	476, 506
Bsc4I	CCNNNNNNNGG	2 cut(s)	260, 585
Bse1I	ACTGG	1 cut(s)	165
Bse3DI	GCAATG	1 cut(s)	573
BseBI	CCWGG	3 cut(s)	261, 465, 543
BseDI	CCNNGG	2 cut(s)	464, 579
BseGI	GGATG	1 cut(s)	240
BseLI	CCNNNNNNNGG	2 cut(s)	260, 585
BseMI	GCAATG	1 cut(s)	573
BseMII	CTCAG	1 cut(s)	294
BseNI	ACTGG	1 cut(s)	165
BseRI	GAGGAG	3 cut(s)	87, 142, 497
BseXI	GCAGC	4 cut(s)	173, 583, 586, 712
BsgI	GTGCAG	1 cut(s)	552
BshFI	GGCC	2 cut(s)	308, 402
BshNI	GGYRCC	1 cut(s)	425
BsiHKAI	GWGCWC	1 cut(s)	97
BslFI	GGGAC	2 cut(s)	185, 601
BslI	CCNNNNNNNGG	2 cut(s)	260, 585
BsmAI	GTCTC	2 cut(s)	44, 689
BsmBI	CGTCTC	2 cut(s)	44, 689
BsmFI	GGGAC	2 cut(s)	185, 601
BsnI	GGCC	2 cut(s)	308, 402
Bsp1286I	GDGCHC	1 cut(s)	97
Bsp143I	GATC	2 cut(s)	105, 202
BspACI	CCGC	4 cut(s)	109, 142, 156, 159
BspANI	GGCC	2 cut(s)	308, 402
BspCNI	CTCAG	1 cut(s)	295
BspLI	GGNNCC	1 cut(s)	427
BspMI	ACCTGC	1 cut(s)	362
BspPI	GGATC	2 cut(s)	100, 197
BspT107I	GGYRCC	1 cut(s)	425
BspTI	CTTAAG	1 cut(s)	671
BsrDI	GCAATG	1 cut(s)	573
BsrI	ACTGG	1 cut(s)	165
BssECI	CCNNGG	2 cut(s)	464, 579
BssMI	GATC	2 cut(s)	105, 202
BssNI	GRCGYC	1 cut(s)	698
BssSI	CACGAG	1 cut(s)	51
Bst2BI	CACGAG	1 cut(s)	51
Bst2UI	CCWGG	3 cut(s)	261, 465, 543
Bst4CI	ACNGT	4 cut(s)	71, 92, 125, 176
Bst6I	CTCTTC	2 cut(s)	152, 232
BstACI	GRCGYC	1 cut(s)	698
BstAFI	CTTAAG	1 cut(s)	671
BstBAI	YACGTR	1 cut(s)	526
BstC8I	GCNNGC	2 cut(s)	552, 649
BstDEI	CTNAG	2 cut(s)	216, 303
BstDSI	CCRYGG	1 cut(s)	579
BstENI	CCTNNNNNAGG	1 cut(s)	258
BstF5I	GGATG	1 cut(s)	240
BstKTI	GATC	2 cut(s)	108, 205
BstMAI	GTCTC	2 cut(s)	44, 689
BstMBI	GATC	2 cut(s)	105, 202
BstMWI	GCNNNNNNNGC	4 cut(s)	221, 425, 457, 547
BstNI	CCWGG	3 cut(s)	261, 465, 543
BstSCI	CCNGG	3 cut(s)	259, 463, 541
BstV1I	GCAGC	4 cut(s)	173, 583, 586, 712
BstV2I	GAAGAC	1 cut(s)	65
BstX2I	RGATCY	1 cut(s)	202
BstYI	RGATCY	1 cut(s)	202
BsuI	GTATCC	1 cut(s)	310
BsuRI	GGCC	2 cut(s)	308, 402
BtgI	CCRYGG	1 cut(s)	579
BtsCI	GGATG	1 cut(s)	240
BtsIMutI	CAGTG	2 cut(s)	181, 300
BveI	ACCTGC	1 cut(s)	362
Cac8I	GCNNGC	2 cut(s)	552, 649
Cfr13I	GGNCC	1 cut(s)	401
CseI	GACGC	1 cut(s)	295
CviAII	CATG	2 cut(s)	268, 442
DdeI	CTNAG	2 cut(s)	216, 303
DpnI	GATC	2 cut(s)	107, 204
DpnII	GATC	2 cut(s)	105, 202
Eam1104I	CTCTTC	2 cut(s)	152, 232
EarI	CTCTTC	2 cut(s)	152, 232
EciI	GGCGGA	3 cut(s)	98, 131, 145
Eco147I	AGGCCT	1 cut(s)	308
Eco57I	CTGAAG	1 cut(s)	210
EcoNI	CCTNNNNNAGG	1 cut(s)	258
EcoRII	CCWGG	3 cut(s)	259, 463, 541
Esp3I	CGTCTC	2 cut(s)	44, 689
FaeI	CATG	2 cut(s)	271, 445
FaiI	YATR	5 cut(s)	269, 281, 359, 443, 501
FaqI	GGGAC	2 cut(s)	185, 601
FatI	CATG	2 cut(s)	267, 441
Fnu4HI	GCNGC	5 cut(s)	159, 162, 597, 600, 726
FokI	GGATG	1 cut(s)	227
Fsp4HI	GCNGC	5 cut(s)	159, 162, 597, 600, 726
FspBI	CTAG	2 cut(s)	384, 689
GluI	GCNGC	5 cut(s)	159, 162, 597, 600, 726
HaeIII	GGCC	2 cut(s)	308, 402
HgaI	GACGC	1 cut(s)	295
Hin1I	GRCGYC	1 cut(s)	698
Hin1II	CATG	2 cut(s)	271, 445
HinfI	GANTC	4 cut(s)	210, 237, 264, 589
HphI	GGTGA	1 cut(s)	557
Hpy188I	TCNGA	2 cut(s)	481, 608
Hpy188III	TCNNGA	3 cut(s)	170, 275, 296
Hpy99I	CGWCG	2 cut(s)	289, 703
HpyAV	CCTTC	2 cut(s)	111, 463
HpyCH4III	ACNGT	4 cut(s)	71, 92, 125, 176
HpyCH4IV	ACGT	2 cut(s)	525, 698
HpyCH4V	TGCA	7 cut(s)	4, 66, 199, 371, 523, 533, 602
HpyF10VI	GCNNNNNNNGC	4 cut(s)	221, 425, 457, 547
HpyF3I	CTNAG	2 cut(s)	216, 303
HpySE526I	ACGT	2 cut(s)	525, 698
Hsp92I	GRCGYC	1 cut(s)	698
Hsp92II	CATG	2 cut(s)	271, 445
Kzo9I	GATC	2 cut(s)	105, 202
LmnI	GCTCC	1 cut(s)	100
Lsp1109I	GCAGC	4 cut(s)	173, 583, 586, 712
LweI	GCATC	1 cut(s)	510
MaeI	CTAG	2 cut(s)	384, 689
MaeII	ACGT	2 cut(s)	525, 698
MaeIII	GTNAC	1 cut(s)	660
MalI	GATC	2 cut(s)	107, 204
MboI	GATC	2 cut(s)	105, 202
MboII	GAAGA	6 cut(s)	65, 139, 203, 219, 284, 643
MflI	RGATCY	1 cut(s)	202
MhlI	GDGCHC	1 cut(s)	97
MluCI	AATT	3 cut(s)	15, 431, 654
MlyI	GAGTC	2 cut(s)	246, 583
MmeI	TCCRAC	2 cut(s)	474, 631
MseI	TTAA	3 cut(s)	312, 672, 730
MslI	CAYNNNNRTG	2 cut(s)	90, 528
MspCI	CTTAAG	1 cut(s)	671
MspR9I	CCNGG	3 cut(s)	261, 465, 543
MvaI	CCWGG	3 cut(s)	261, 465, 543
MwoI	GCNNNNNNNGC	4 cut(s)	221, 425, 457, 547
NdeII	GATC	2 cut(s)	105, 202
NlaIII	CATG	2 cut(s)	271, 445
NlaIV	GGNNCC	1 cut(s)	427
OliI	CACNNNNGTG	2 cut(s)	90, 528
PaqCI	CACCTGC	1 cut(s)	362
PceI	AGGCCT	1 cut(s)	308
PfeI	GAWTC	2 cut(s)	210, 264
PkrI	GCNGC	5 cut(s)	160, 163, 598, 601, 727
PleI	GAGTC	2 cut(s)	245, 583
PpsI	GAGTC	2 cut(s)	245, 583
Ppu21I	YACGTR	1 cut(s)	526
Psp6I	CCWGG	3 cut(s)	259, 463, 541
PspGI	CCWGG	3 cut(s)	259, 463, 541
PspN4I	GGNNCC	1 cut(s)	427
PspPI	GGNCC	1 cut(s)	401
PsuI	RGATCY	1 cut(s)	202
RseI	CAYNNNNRTG	2 cut(s)	90, 528
SaqAI	TTAA	3 cut(s)	312, 672, 730
SatI	GCNGC	5 cut(s)	159, 162, 597, 600, 726
Sau3AI	GATC	2 cut(s)	105, 202
Sau96I	GGNCC	1 cut(s)	401
SchI	GAGTC	2 cut(s)	246, 583
ScrFI	CCNGG	3 cut(s)	261, 465, 543
SduI	GDGCHC	1 cut(s)	97
SfaNI	GCATC	1 cut(s)	510
SmiMI	CAYNNNNRTG	2 cut(s)	90, 528
SmlI	CTYRAG	1 cut(s)	671
SmoI	CTYRAG	1 cut(s)	671
Sse9I	AATT	3 cut(s)	15, 431, 654
SseBI	AGGCCT	1 cut(s)	308
SsiI	CCGC	4 cut(s)	109, 142, 156, 159
SspMI	CTAG	2 cut(s)	384, 689
StuI	AGGCCT	1 cut(s)	308
StyD4I	CCNGG	3 cut(s)	259, 463, 541
TaaI	ACNGT	4 cut(s)	71, 92, 125, 176
TaiI	ACGT	2 cut(s)	528, 701
TaqI	TCGA	2 cut(s)	104, 297
TasI	AATT	3 cut(s)	15, 431, 654
TauI	GCSGC	1 cut(s)	161
TfiI	GAWTC	2 cut(s)	210, 264
Tru1I	TTAA	3 cut(s)	312, 672, 730
Tru9I	TTAA	3 cut(s)	312, 672, 730
TscAI	CASTG	2 cut(s)	181, 307
TseI	GCWGC	4 cut(s)	161, 596, 599, 725
TspDTI	ATGAA	1 cut(s)	382
TspRI	CASTG	2 cut(s)	181, 307
Vha464I	CTTAAG	1 cut(s)	671
XagI	CCTNNNNNAGG	1 cut(s)	258
XapI	RAATTY	1 cut(s)	431
XspI	CTAG	2 cut(s)	384, 689
ZraI	GACGTC	1 cut(s)	699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.