Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003293

Physical Location & Seq

Genomic Coordinates Reverse (-)

9671632 .. 9676307

Gene Structure 4676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G27770.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3063 bp

ATGGAGAGCTACTTGAACGAAAACTTCGGCGATGTGAAGCCGAAGAACTCGTCCGATGAGGCGTTGCAGCGTTGGAGGAAGCTCTGCTGGATCGTCAAGAATCCTAAAAGGAGATTTAGATTCACTGCTAATCTGTCTAAGCGTTCCGAGGCCGAGGCGATTCGGCGTTCCAATCAGGAAAAATTTCGAGTGGCGGTCTTAGTTTCACAAGCTGCACTTCAGTTCATTAATAGTTTAAAGTTGTCCAGTGAGTATACACTACCTGAAGAAGTAAGAAAAGCAGGGTTTGAGATTTGTCCTGATGAGTTGGGATCAATTGTAGAAGGTCATGATTTGAAAAAGTTGAAAATTCATGGTGGAACTGAGGGCCTCACTGAAAAACTTTCCACGTCTATTGCTAGTGGAATTAGTACATCTGAAGACCTGCTGAGTGTAAGAAAAGAAATTTATGGAATCAACCAATTCACAGAAAGCCCCAGCCGTGGCTTTTGGTTATTTGTTTGGGAAGCCCTTCAGGATACAACACTTATGATTCTAGCTGCATGTGCGTTTGTTTCACTTATAGTTGGAATACTGATGGAAGGGTGGCCTATTGGTGCCCATGACGGACTTGGTATAGTGGCGAGTATTCTGCTTGTTGTGTTTGTCACTGCCACTAGTGATTATAGGCAATCCCTGCAATTCAAGGACCTGGATGCAGAGAAGAAAAAGATTGTGGTTCAGGTTACGAGAGACAAACTGAGGCAAAAAATCTCAATATATGATCTACTCCCTGGAGATGTTGTTCATCTTGGCATTGGAGACCAGATTCCAGCAGATGGGCTTTTTATCTCAGGGTTTTCTGTTCTGATAAATGAATCGAGCTTGACTGGAGAAAGTGAACCGGTTAGTGTCAGTGTGGAACACCCGTTTCTTCTCTCTGGTACCAAGGTTCAGGATGGATCTTGCAAAATGTTGGTGACTACAGTTGGAATGAGGACTCAATGGGGTAAACTGATGGCTACACTAAGTGAAGGCGGTGATGATGAGACACCGTTGCAAGTAAAACTTAATGGTGTGGCAACCATCATTGGTAAAATAGGTCTATTTTTTGCTGTCATTACGTTTGCTGTTTTGGTTCAAGGATTGGCTAATCAGAAGCGCCTAGATAATTCTCACTGGATCTGGACTGCTGATGAATTGATGGCGATGCTAGAATATTTTGCTGTTGCTGTAACAATTGTTGTGGTTGCAGTTCCGGAGGGTCTGCCGTTGGCTGTGACATTAAGTCTTGCTTTTGCCATGAAAAAGATGATGAATGACAAAGCGCTAGTGCGCAATCTTGCTGCTTGTGAGACAATGGGATCTGCAACAACTATTTGTAGTGACAAAACTGGAACTCTTACAACAAATCACATGACAGTTGTAAAAGCCTGCATCTGTGAACAAGCCAAAGAGGTTAATGGTCCTGATGCTGCTATGAAATTTGCCTCTGGTATCCCTGAGTCTGCTGTTAAACTTCTACTGCAATCTATATTTACTAACACTGGTGGTGAGATTGTTGTGGGCAAAGGAAACAAAACCGAGATACTGGGAACTCCTACAGAAACTGCTCTGTTAGAATTTGGGTTGTCACTCGGAGGGGACTTCCAAGAAGTAAGGCAAGCCTCAAATGTTGTGAAAGTTGAGCCCTTTAACTCTACAAAGAAAAGAATGGGAGTTGTCATTGAGCTGCCTGAAAGACATTTCCGGGCACATTGTAAGGGTGCTTCAGAGATAGTTTTAGATTCTTGTGATAAGTACATCAACAAAGATGGTGAAGTTGTTCCTCTCGATGAAAAATCGACCAGTCACCTGAAGAACATAATTGAGGAATTTGCTAGCGAAGCACTTCGAACTCTTTGCCTAGCGTATTTCGAAATTGGTGATGAATTCTCATTAGAGGCTCCTATTCCAAGTGGTGGATACACTTGTATAGGTATTGTGGGCATCAAAGACCCTGTACGCCCTGGTGTCAAGGAGTCTGTTGCGATTTGTAAATCTGCTGGCATCACTGTCAGAATGGTGACTGGAGATAACCTTACTACTGCGAAGGCCATAGCCAGGGAGTGTGGCATATTGACTGATGATGGCATAGCTATCGAAGGTCCTGAATTCCGGGAGAAAAGTGATGAGGAACTGCTCAAGCTAATCCCAAAATTGCAGGTGATGGCACGATCCTCGCCCATGGATAAGCATACTTTGGTGAGACTCCTCCGCACAATGTTTCAGGAAGTCGTTGCAGTGACAGGTGATGGAACAAATGATGCTCCAGCACTTCATGAAGCTGATATTGGACTCGCAATGGGCATTTCCGGAACTGAGGTGGCAAAAGAAAGTGCGGATGTGATTATCCTAGATGATAACTTCTCTACGATTGTCACAGTAGCCAAATGGGGCCGTTCTGTGTACATAAATATTCAGAAATTTGTCCAGTTCCAGCTGACAGTAAATGTTGTGGCTCTTATTGTCAACTTCTTATCAGCCTGCCTCACTGGAAACGCGCCTCTGACTGCTGTCCAACTACTGTGGGTTAACATGATAATGGACACACTTGGAGCACTCGCGCTAGCGACTGAACCACCACAGGACGACCTGATGAAGAGATCTCCAGTGGGAAGGAAAGGAAACTTCATAAGTAATGTAATGTGGAGGAACATCCTTGGTCAGTCACTCTACCAGCTTGTCATCATATGGTGTCTTCAAACAAAGGGAAAGACAATGTTTGGTCTCGATGGCCCCGACTCTGATCTAACACTCAATACCCTTATTTTCAACATTTTTGTCTTCTGCCAGGTATTCAATGAGATAAGCTCGAGGGAAATGGAAAAAATTGATGTGTTCAAGGGGATACTAAAGAACTACGTATTCGTAGCGGTTCTAACATGTACAGTGGTGTTCCAAGTAATCATAATCGAGCTGCTGGGTACATTTGCGGATACAACACCATTAAATTTGGGACAATGGTTGGTTAGCATCATACTCGGGTTCCTTGGCATGCCTGTTGCTGCTGCCTTGAAGATGATCCCTGTTGGTTCACACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009706 GO:0009941 GO:0012505 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0019866 GO:0022803 GO:0022804 GO:0022838 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031226 GO:0031967 GO:0031969 GO:0031975 GO:0034220 GO:0042170 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

1020

Amino Acids

111.26

Weight (kDa)

5.49

Isoelectric Point (pI)

36.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	5 - 50	7.9e-22	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	118 - 186	3.6e-10	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	238 - 335	1e-20	P-type ATPase actuator domain
Hydrolase	PF00702	452 - 770	2.8e-12	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	515 - 663	3.1e-35	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	841 - 1015	1.8e-43	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27770 AT1G27770 AT1G27770 AT1G27770
fragaria_vesca	FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180 FvH4_2g33180
malus_domestica	MD08G1085200.v1.1 MD08G1085600.v1.1 MD12G1068300.v1.1 MD15G1070800.v1.1
prunus_persica	Prupe.1G423500_v2.0.a1 Prupe.1G423500_v2.0.a1 Prupe.1G423500_v2.0.a1 Prupe.1G423500_v2.0.a1 Prupe.1G423500_v2.0.a1
pyrus_communis	pycom08g07020 pycom15g06650 pycom15g06660
rosa_chinensis	RchiOBHm_Chr6g0309491
rosa_laevigata	RLG00000010561
rosa_multiflora	Rmu_sc0007283.1_g000007
rosa_roxburghii	Rroxscaffold_7G00159360
rosa_rugosa	Rorug06G0372300 Rorug06G0372400
rosa_samantha	Rh6AG485700 Rh6BG495000
rosa_wichuraiana	Rw6G042300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2173
Acc16I	TGCGCA	1 cut(s)	1316
Acc36I	ACCTGC	2 cut(s)	432, 2173
Acc65I	GGTACC	1 cut(s)	923
AccB1I	GGYRCC	2 cut(s)	596, 923
AccB7I	CCANNNNNTGG	2 cut(s)	818, 1940
AccI	GTMKAC	1 cut(s)	254
AccII	CGCG	2 cut(s)	2522, 2585
AccIII	TCCGGA	2 cut(s)	1237, 2333
AciI	CCGC	6 cut(s)	194, 1017, 2236, 2360, 2894, 2954
AclWI	GGATC	7 cut(s)	98, 319, 949, 1169, 1351, 2190, 3037
AcuI	CTGAAG	6 cut(s)	203, 285, 438, 497, 1734, 1856
AdeI	CACNNNGTG	1 cut(s)	1010
AfaI	GTAC	7 cut(s)	412, 925, 1781, 1983, 2429, 2908, 2947
AfeI	AGCGCT	1 cut(s)	1308
AfiI	CCNNNNNNNGG	4 cut(s)	482, 818, 1940, 2082
AflIII	ACRYGT	1 cut(s)	2903
AgeI	ACCGGT	1 cut(s)	883
AhdI	GACNNNNNGTC	1 cut(s)	1266
AhlI	ACTAGT	1 cut(s)	656
AjiI	CACGTC	1 cut(s)	390
AjnI	CCWGG	5 cut(s)	690, 772, 1987, 2081, 2811
AjuI	GAANNNNNNNTTGG	2 cut(s)	2295, 2327
AloI	GAACNNNNNNTCC	2 cut(s)	768, 800
Alw21I	GWGCWC	1 cut(s)	2581
Alw26I	GTCTC	6 cut(s)	726, 795, 1022, 1328, 2221, 2753
AlwI	GGATC	7 cut(s)	98, 319, 949, 1169, 1351, 2190, 3037
AlwNI	CAGNNNCTG	1 cut(s)	1589
Ama87I	CYCGRG	2 cut(s)	2833, 3002
Aor13HI	TCCGGA	2 cut(s)	1237, 2333
Aor51HI	AGCGCT	1 cut(s)	1308
AoxI	GGCC	6 cut(s)	150, 367, 587, 2073, 2416, 2755
ApeKI	GCWGC	9 cut(s)	67, 212, 539, 1325, 1454, 1711, 2938, 3026, 3029
ArsI	GACNNNNNNTTYG	2 cut(s)	35, 67
AseI	ATTAAT	1 cut(s)	228
AsiGI	ACCGGT	1 cut(s)	883
Asp700I	GAANNNNTTC	4 cut(s)	183, 510, 1803, 1869
Asp718I	GGTACC	1 cut(s)	923
AspLEI	GCGC	5 cut(s)	1143, 1309, 1317, 2524, 2587
AspS9I	GGNCC	6 cut(s)	367, 688, 1445, 2126, 2416, 2756
AsuC2I	CCSGG	2 cut(s)	1730, 2138
AsuII	TTCGAA	2 cut(s)	1873, 1896
AsuNHI	GCTAGC	2 cut(s)	1859, 2587
AvaI	CYCGRG	2 cut(s)	2833, 3002
AvaII	GGWCC	3 cut(s)	688, 1445, 2126
BaeGI	GKGCMC	2 cut(s)	601, 1735
BaeI	ACNNNNGTAYC	4 cut(s)	915, 948, 1936, 1969
BanI	GGYRCC	2 cut(s)	596, 923
BanII	GRGCYC	1 cut(s)	1671
BarI	GAAGNNNNNNTAC	2 cut(s)	1732, 1764
BbsI	GAAGAC	3 cut(s)	426, 2711, 2797
Bbv12I	GWGCWC	1 cut(s)	2581
BbvI	GCAGC	9 cut(s)	79, 199, 526, 1312, 1441, 1698, 2925, 3013, 3016
BceAI	ACGGC	3 cut(s)	465, 1234, 2403
BciT130I	CCWGG	5 cut(s)	692, 774, 1989, 2083, 2813
BciVI	GTATCC	5 cut(s)	511, 1487, 1937, 2862, 2950
BcnI	CCSGG	2 cut(s)	1730, 2138
BcoDI	GTCTC	6 cut(s)	726, 795, 1022, 1328, 2221, 2753
BcuI	ACTAGT	1 cut(s)	656
BfmI	CTRYAG	2 cut(s)	963, 1581
BfoI	RGCGCY	2 cut(s)	1144, 1310
BfuAI	ACCTGC	2 cut(s)	432, 2173
BfuI	GTATCC	5 cut(s)	511, 1487, 1937, 2862, 2950
BglII	AGATCT	1 cut(s)	2624
BisI	GCNGC	9 cut(s)	68, 213, 540, 1326, 1455, 1712, 2939, 3027, 3030
BlsI	GCNGC	9 cut(s)	69, 214, 541, 1327, 1456, 1713, 2940, 3028, 3031
Bme1390I	CCNGG	7 cut(s)	692, 774, 1730, 1989, 2083, 2138, 2813
Bme18I	GGWCC	3 cut(s)	688, 1445, 2126
BmeRI	GACNNNNNGTC	1 cut(s)	1266
BmeT110I	CYCGRG	2 cut(s)	2833, 3002
BmgBI	CACGTC	1 cut(s)	390
BmgT120I	GGNCC	6 cut(s)	367, 688, 1445, 2126, 2416, 2756
BmiI	GGNNCC	6 cut(s)	598, 925, 1926, 2417, 2758, 3008
BmrFI	CCNGG	7 cut(s)	692, 774, 1730, 1989, 2083, 2138, 2813
BmrI	ACTGGG	1 cut(s)	1580
BmsI	GCATC	8 cut(s)	685, 1179, 1425, 1441, 1977, 2037, 2275, 3003
BmtI	GCTAGC	2 cut(s)	1863, 2591
BmuI	ACTGGG	1 cut(s)	1580
BoxI	GACNNNNGTC	1 cut(s)	2534
BpiI	GAAGAC	3 cut(s)	426, 2711, 2797
BplI	GAGNNNNNCTC	2 cut(s)	2816, 2848
BpmI	CTGGAG	5 cut(s)	795, 891, 2070, 2274, 2613
Bpu14I	TTCGAA	2 cut(s)	1873, 1896
BpuEI	CTTGAG	1 cut(s)	2147
BpuMI	CCSGG	2 cut(s)	1730, 2138
BsaAI	YACGTR	1 cut(s)	2884
BsaI	GGTCTC	2 cut(s)	795, 2753
BsaWI	WCCGGW	3 cut(s)	883, 1237, 2333
BsaXI	ACNNNNNCTCC	2 cut(s)	768, 798
Bsc4I	CCNNNNNNNGG	4 cut(s)	482, 818, 1940, 2082
Bse118I	RCCGGY	1 cut(s)	883
Bse3DI	GCAATG	1 cut(s)	2328
BseAI	TCCGGA	2 cut(s)	1237, 2333
BseBI	CCWGG	5 cut(s)	692, 774, 1989, 2083, 2813
BseGI	GGATG	4 cut(s)	700, 943, 2368, 2676
BseLI	CCNNNNNNNGG	4 cut(s)	482, 818, 1940, 2082
BseMI	GCAATG	1 cut(s)	2328
BseMII	CTCAG	6 cut(s)	354, 419, 731, 846, 1473, 2331
BseRI	GAGGAG	1 cut(s)	2222
BseSI	GKGCMC	2 cut(s)	601, 1735
BseXI	GCAGC	9 cut(s)	79, 199, 526, 1312, 1441, 1698, 2925, 3013, 3016
BseYI	CCCAGC	2 cut(s)	476, 2941
BsgI	GTGCAG	1 cut(s)	198
Bsh1236I	CGCG	2 cut(s)	2522, 2585
BshFI	GGCC	6 cut(s)	152, 369, 589, 2075, 2418, 2757
BshNI	GGYRCC	2 cut(s)	596, 923
BshTI	ACCGGT	1 cut(s)	883
BsiHKAI	GWGCWC	1 cut(s)	2581
BsiHKCI	CYCGRG	2 cut(s)	2833, 3002
BsiSI	CCGG	5 cut(s)	884, 1238, 1729, 2137, 2334
BslFI	GGGAC	2 cut(s)	1637, 2991
BslI	CCNNNNNNNGG	4 cut(s)	482, 818, 1940, 2082
BsmAI	GTCTC	6 cut(s)	726, 795, 1022, 1328, 2221, 2753
BsmFI	GGGAC	2 cut(s)	1637, 2991
BsnI	GGCC	6 cut(s)	152, 369, 589, 2075, 2418, 2757
Bso31I	GGTCTC	2 cut(s)	795, 2753
BsoBI	CYCGRG	2 cut(s)	2833, 3002
Bsp119I	TTCGAA	2 cut(s)	1873, 1896
Bsp1286I	GDGCHC	4 cut(s)	601, 1671, 1735, 2581
Bsp13I	TCCGGA	2 cut(s)	1237, 2333
Bsp1407I	TGTACA	2 cut(s)	2427, 2906
Bsp19I	CCATGG	1 cut(s)	2205
BspACI	CCGC	6 cut(s)	194, 1017, 2236, 2360, 2894, 2954
BspANI	GGCC	6 cut(s)	152, 369, 589, 2075, 2418, 2757
BspCNI	CTCAG	6 cut(s)	355, 420, 732, 845, 1474, 2332
BspEI	TCCGGA	2 cut(s)	1237, 2333
BspFNI	CGCG	2 cut(s)	2522, 2585
BspHI	TCATGA	2 cut(s)	328, 2299
BspLI	GGNNCC	6 cut(s)	598, 925, 1926, 2417, 2758, 3008
BspMI	ACCTGC	2 cut(s)	432, 2173
BspOI	GCTAGC	2 cut(s)	1863, 2591
BspPI	GGATC	7 cut(s)	98, 319, 949, 1169, 1351, 2190, 3037
BspT104I	TTCGAA	2 cut(s)	1873, 1896
BspT107I	GGYRCC	2 cut(s)	596, 923
BspTNI	GGTCTC	2 cut(s)	795, 2753
BsrDI	GCAATG	1 cut(s)	2328
BsrFI	RCCGGY	1 cut(s)	883
BsrGI	TGTACA	2 cut(s)	2427, 2906
BssAI	RCCGGY	1 cut(s)	883
BssNAI	GTATAC	1 cut(s)	255
BssT1I	CCWWGG	4 cut(s)	927, 2205, 2680, 3010
Bst1107I	GTATAC	1 cut(s)	255
Bst2UI	CCWGG	5 cut(s)	692, 774, 1989, 2083, 2813
Bst4CI	ACNGT	8 cut(s)	967, 1035, 1402, 2035, 2404, 2467, 2547, 2911
Bst6I	CTCTTC	1 cut(s)	2615
BstAPI	GCANNNNNTGC	1 cut(s)	676
BstAUI	TGTACA	2 cut(s)	2427, 2906
BstBAI	YACGTR	1 cut(s)	2884
BstBI	TTCGAA	2 cut(s)	1873, 1896
BstC8I	GCNNGC	7 cut(s)	1414, 1644, 1861, 2026, 2506, 2589, 3017
BstDEI	CTNAG	9 cut(s)	138, 199, 363, 428, 740, 832, 1007, 1482, 2340
BstDSI	CCRYGG	2 cut(s)	481, 2205
BstF5I	GGATG	4 cut(s)	700, 943, 2368, 2676
BstFNI	CGCG	2 cut(s)	2522, 2585
BstH2I	RGCGCY	2 cut(s)	1144, 1310
BstHHI	GCGC	5 cut(s)	1143, 1309, 1317, 2524, 2587
BstMAI	GTCTC	6 cut(s)	726, 795, 1022, 1328, 2221, 2753
BstMWI	GCNNNNNNNGC	3 cut(s)	545, 676, 1865
BstNI	CCWGG	5 cut(s)	692, 774, 1989, 2083, 2813
BstNSI	RCATGY	3 cut(s)	546, 2907, 3019
BstPAI	GACNNNNGTC	1 cut(s)	2534
BstSCI	CCNGG	7 cut(s)	690, 772, 1728, 1987, 2081, 2136, 2811
BstSFI	CTRYAG	2 cut(s)	963, 1581
BstSLI	GKGCMC	2 cut(s)	601, 1735
BstSNI	TACGTA	1 cut(s)	2884
BstUI	CGCG	2 cut(s)	2522, 2585
BstV1I	GCAGC	9 cut(s)	79, 199, 526, 1312, 1441, 1698, 2925, 3013, 3016
BstV2I	GAAGAC	3 cut(s)	426, 2711, 2797
BstX2I	RGATCY	4 cut(s)	941, 1161, 1343, 2624
BstYI	RGATCY	4 cut(s)	941, 1161, 1343, 2624
BstZ17I	GTATAC	1 cut(s)	255
BsuI	GTATCC	5 cut(s)	511, 1487, 1937, 2862, 2950
BsuRI	GGCC	6 cut(s)	152, 369, 589, 2075, 2418, 2757
BtgI	CCRYGG	2 cut(s)	481, 2205
BtgZI	GCGATG	2 cut(s)	45, 1202
BtrI	CACGTC	1 cut(s)	390
BtsCI	GGATG	4 cut(s)	700, 943, 2368, 2676
BtsI	GCAGTG	3 cut(s)	123, 648, 2268
BveI	ACCTGC	2 cut(s)	432, 2173
Cac8I	GCNNGC	7 cut(s)	1414, 1644, 1861, 2026, 2506, 2589, 3017
CaiI	CAGNNNCTG	1 cut(s)	1589
CciI	TCATGA	2 cut(s)	328, 2299
CfoI	GCGC	5 cut(s)	1143, 1309, 1317, 2524, 2587
Cfr10I	RCCGGY	1 cut(s)	883
Cfr13I	GGNCC	6 cut(s)	367, 688, 1445, 2126, 2416, 2756
Csp6I	GTAC	7 cut(s)	411, 924, 1780, 1982, 2428, 2907, 2946
CspAI	ACCGGT	1 cut(s)	883
CspCI	CAANNNNNGTGG	6 cut(s)	376, 411, 1206, 1241, 2528, 2563
CviQI	GTAC	7 cut(s)	411, 924, 1780, 1982, 2428, 2907, 2946
DdeI	CTNAG	9 cut(s)	138, 199, 363, 428, 740, 832, 1007, 1482, 2340
DraI	TTTAAA	1 cut(s)	237
DraIII	CACNNNGTG	1 cut(s)	1010
DriI	GACNNNNNGTC	1 cut(s)	1266
Eam1104I	CTCTTC	1 cut(s)	2615
Eam1105I	GACNNNNNGTC	1 cut(s)	1266
EarI	CTCTTC	1 cut(s)	2615
Eco105I	TACGTA	1 cut(s)	2884
Eco130I	CCWWGG	4 cut(s)	927, 2205, 2680, 3010
Eco24I	GRGCYC	1 cut(s)	1671
Eco31I	GGTCTC	2 cut(s)	795, 2753
Eco47I	GGWCC	3 cut(s)	688, 1445, 2126
Eco47III	AGCGCT	1 cut(s)	1308
Eco57I	CTGAAG	6 cut(s)	203, 285, 438, 497, 1734, 1856
Eco88I	CYCGRG	2 cut(s)	2833, 3002
EcoO109I	RGGNCCY	3 cut(s)	367, 688, 2126
EcoRI	GAATTC	2 cut(s)	1910, 2132
EcoRII	CCWGG	5 cut(s)	690, 772, 1987, 2081, 2811
EcoT14I	CCWWGG	4 cut(s)	927, 2205, 2680, 3010
EcoT38I	GRGCYC	1 cut(s)	1671
ErhI	CCWWGG	4 cut(s)	927, 2205, 2680, 3010
FalI	AAGNNNNNCTT	6 cut(s)	201, 233, 1032, 1064, 1258, 1290
FaqI	GGGAC	2 cut(s)	1637, 2991
FauNDI	CATATG	1 cut(s)	2711
FblI	GTMKAC	1 cut(s)	254
Fnu4HI	GCNGC	9 cut(s)	68, 213, 540, 1326, 1455, 1712, 2939, 3027, 3030
FokI	GGATG	4 cut(s)	707, 950, 2375, 2663
FriOI	GRGCYC	1 cut(s)	1671
Fsp4HI	GCNGC	9 cut(s)	68, 213, 540, 1326, 1455, 1712, 2939, 3027, 3030
FspI	TGCGCA	1 cut(s)	1316
GlaI	GCGC	5 cut(s)	1142, 1308, 1316, 2523, 2586
GluI	GCNGC	9 cut(s)	68, 213, 540, 1326, 1455, 1712, 2939, 3027, 3030
GsaI	CCCAGC	2 cut(s)	480, 2945
GsuI	CTGGAG	5 cut(s)	795, 891, 2070, 2274, 2613
HaeII	RGCGCY	2 cut(s)	1144, 1310
HaeIII	GGCC	6 cut(s)	152, 369, 589, 2075, 2418, 2757
HapII	CCGG	5 cut(s)	884, 1238, 1729, 2137, 2334
HhaI	GCGC	5 cut(s)	1143, 1309, 1317, 2524, 2587
Hin6I	GCGC	5 cut(s)	1141, 1307, 1315, 2522, 2585
HinP1I	GCGC	5 cut(s)	1141, 1307, 1315, 2522, 2585
HincII	GTYRAC	2 cut(s)	2491, 2554
HindII	GTYRAC	2 cut(s)	2491, 2554
HpaI	GTTAAC	1 cut(s)	2554
HpaII	CCGG	5 cut(s)	884, 1238, 1729, 2137, 2334
Hpy166II	GTNNAC	8 cut(s)	255, 881, 992, 1424, 2428, 2491, 2554, 3056
Hpy8I	GTNNAC	8 cut(s)	255, 881, 992, 1424, 2428, 2491, 2554, 3056
HpyAV	CCTTC	7 cut(s)	317, 521, 575, 1007, 2065, 2117, 2631
HpyCH4III	ACNGT	8 cut(s)	967, 1035, 1402, 2035, 2404, 2467, 2547, 2911
HpyCH4IV	ACGT	3 cut(s)	389, 1103, 2883
HpyF10VI	GCNNNNNNNGC	3 cut(s)	545, 676, 1865
HpyF3I	CTNAG	9 cut(s)	138, 199, 363, 428, 740, 832, 1007, 1482, 2340
HpySE526I	ACGT	3 cut(s)	389, 1103, 2883
HspAI	GCGC	5 cut(s)	1141, 1307, 1315, 2522, 2585
Kpn2I	TCCGGA	2 cut(s)	1237, 2333
KpnI	GGTACC	1 cut(s)	927
KspAI	GTTAAC	1 cut(s)	2554
LmnI	GCTCC	3 cut(s)	1930, 2293, 2576
Lsp1109I	GCAGC	9 cut(s)	79, 199, 526, 1312, 1441, 1698, 2925, 3013, 3016
LweI	GCATC	8 cut(s)	685, 1179, 1425, 1441, 1977, 2037, 2275, 3003
MaeII	ACGT	3 cut(s)	389, 1103, 2883
MfeI	CAATTG	2 cut(s)	315, 1218
MflI	RGATCY	4 cut(s)	941, 1161, 1343, 2624
MhlI	GDGCHC	4 cut(s)	601, 1671, 1735, 2581
MlyI	GAGTC	6 cut(s)	973, 1493, 2009, 2223, 2310, 2756
MmeI	TCCRAC	4 cut(s)	53, 547, 949, 2563
MroI	TCCGGA	2 cut(s)	1237, 2333
MroXI	GAANNNNTTC	4 cut(s)	183, 510, 1803, 1869
MseI	TTAA	9 cut(s)	228, 236, 1050, 1265, 1440, 1494, 1674, 2553, 2969
MslI	CAYNNNNRTG	1 cut(s)	2561
MspA1I	CMGCKG	1 cut(s)	2461
MspI	CCGG	5 cut(s)	884, 1238, 1729, 2137, 2334
MspR9I	CCNGG	7 cut(s)	692, 774, 1730, 1989, 2083, 2138, 2813
MunI	CAATTG	2 cut(s)	315, 1218
MvaI	CCWGG	5 cut(s)	692, 774, 1989, 2083, 2813
MvnI	CGCG	2 cut(s)	2522, 2585
MwoI	GCNNNNNNNGC	3 cut(s)	545, 676, 1865
NciI	CCSGG	2 cut(s)	1730, 2138
NcoI	CCATGG	1 cut(s)	2205
NdeI	CATATG	1 cut(s)	2711
NheI	GCTAGC	2 cut(s)	1859, 2587
NlaIV	GGNNCC	6 cut(s)	598, 925, 1926, 2417, 2758, 3008
NmeAIII	GCCGAG	1 cut(s)	178
NsbI	TGCGCA	1 cut(s)	1316
NspI	RCATGY	3 cut(s)	546, 2907, 3019
NspV	TTCGAA	2 cut(s)	1873, 1896
PaeI	GCATGC	1 cut(s)	3019
PaeR7I	CTCGAG	1 cut(s)	2833
PagI	TCATGA	2 cut(s)	328, 2299
PaqCI	CACCTGC	1 cut(s)	2173
PciI	ACATGT	1 cut(s)	2903
PcsI	WCGNNNNNNNCGW	1 cut(s)	2757
PdmI	GAANNNNTTC	4 cut(s)	183, 510, 1803, 1869
PfeI	GAWTC	8 cut(s)	100, 120, 160, 453, 532, 808, 857, 1766
PflMI	CCANNNNNTGG	2 cut(s)	818, 1940
PfoI	TCCNGGA	1 cut(s)	2136
PinAI	ACCGGT	1 cut(s)	883
PkrI	GCNGC	9 cut(s)	69, 214, 541, 1327, 1456, 1713, 2940, 3028, 3031
PleI	GAGTC	6 cut(s)	973, 1492, 2008, 2223, 2310, 2756
PpsI	GAGTC	6 cut(s)	973, 1492, 2008, 2223, 2310, 2756
Ppu21I	YACGTR	1 cut(s)	2884
PpuMI	RGGWCCY	2 cut(s)	688, 2126
PscI	ACATGT	1 cut(s)	2903
PshAI	GACNNNNGTC	1 cut(s)	2534
PshBI	ATTAAT	1 cut(s)	228
Psp5II	RGGWCCY	2 cut(s)	688, 2126
Psp6I	CCWGG	5 cut(s)	690, 772, 1987, 2081, 2811
PspFI	CCCAGC	2 cut(s)	476, 2941
PspGI	CCWGG	5 cut(s)	690, 772, 1987, 2081, 2811
PspN4I	GGNNCC	6 cut(s)	598, 925, 1926, 2417, 2758, 3008
PspPI	GGNCC	6 cut(s)	367, 688, 1445, 2126, 2416, 2756
PspPPI	RGGWCCY	2 cut(s)	688, 2126
PspXI	VCTCGAGB	1 cut(s)	2833
PstNI	CAGNNNCTG	1 cut(s)	1589
PsuI	RGATCY	4 cut(s)	941, 1161, 1343, 2624
PvuII	CAGCTG	1 cut(s)	2461
RsaI	GTAC	7 cut(s)	412, 925, 1781, 1983, 2429, 2908, 2947
RsaNI	GTAC	7 cut(s)	411, 924, 1780, 1982, 2428, 2907, 2946
RseI	CAYNNNNRTG	1 cut(s)	2561
SaqAI	TTAA	9 cut(s)	228, 236, 1050, 1265, 1440, 1494, 1674, 2553, 2969
SatI	GCNGC	9 cut(s)	68, 213, 540, 1326, 1455, 1712, 2939, 3027, 3030
Sau96I	GGNCC	6 cut(s)	367, 688, 1445, 2126, 2416, 2756
SchI	GAGTC	6 cut(s)	973, 1493, 2009, 2223, 2310, 2756
ScrFI	CCNGG	7 cut(s)	692, 774, 1730, 1989, 2083, 2138, 2813
SduI	GDGCHC	4 cut(s)	601, 1671, 1735, 2581
SfaNI	GCATC	8 cut(s)	685, 1179, 1425, 1441, 1977, 2037, 2275, 3003
SfcI	CTRYAG	2 cut(s)	963, 1581
Sfr274I	CTCGAG	1 cut(s)	2833
SfuI	TTCGAA	2 cut(s)	1873, 1896
SinI	GGWCC	3 cut(s)	688, 1445, 2126
SlaI	CTCGAG	1 cut(s)	2833
SmiMI	CAYNNNNRTG	1 cut(s)	2561
SmlI	CTYRAG	2 cut(s)	2162, 2833
SmoI	CTYRAG	2 cut(s)	2162, 2833
SnaBI	TACGTA	1 cut(s)	2884
SpeI	ACTAGT	1 cut(s)	656
SphI	GCATGC	1 cut(s)	3019
SsiI	CCGC	6 cut(s)	194, 1017, 2236, 2360, 2894, 2954
SspI	AATATT	2 cut(s)	1199, 2437
StyD4I	CCNGG	7 cut(s)	690, 772, 1728, 1987, 2081, 2136, 2811
StyI	CCWWGG	4 cut(s)	927, 2205, 2680, 3010
TaaI	ACNGT	8 cut(s)	967, 1035, 1402, 2035, 2404, 2467, 2547, 2911
TaiI	ACGT	3 cut(s)	392, 1106, 2886
TatI	WGTACW	4 cut(s)	410, 1779, 2427, 2906
TfiI	GAWTC	8 cut(s)	100, 120, 160, 453, 532, 808, 857, 1766
Tru1I	TTAA	9 cut(s)	228, 236, 1050, 1265, 1440, 1494, 1674, 2553, 2969
Tru9I	TTAA	9 cut(s)	228, 236, 1050, 1265, 1440, 1494, 1674, 2553, 2969
TseI	GCWGC	9 cut(s)	67, 212, 539, 1325, 1454, 1711, 2938, 3026, 3029
TspGWI	ACGGA	1 cut(s)	621
Van91I	CCANNNNNTGG	2 cut(s)	818, 1940
VpaK11BI	GGWCC	3 cut(s)	688, 1445, 2126
VspI	ATTAAT	1 cut(s)	228
XceI	RCATGY	3 cut(s)	546, 2907, 3019
XcmI	CCANNNNNNNNNTGG	1 cut(s)	608
XhoI	CTCGAG	1 cut(s)	2833
XmiI	GTMKAC	1 cut(s)	254
XmnI	GAANNNNTTC	4 cut(s)	183, 510, 1803, 1869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.