BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28070 AT2G33510 AT2G33510 |
| fragaria_vesca | FvH4_4g23070 |
| malus_domestica | MD13G1126400.v1.1 MD16G1126900.v1.1 |
| prunus_persica | Prupe.1G219000_v2.0.a1 |
| pyrus_communis | pycom13g10990 pycom16g10770 |
| rosa_chinensis | RchiOBHm_Chr4g0429341 |
| rosa_laevigata | RLG00000007079 |
| rosa_multiflora | Rmu_co8435519.1_g000001 Rmu_sc0000054.1_g000001 Rmu_sc0003904.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00370950 |
| rosa_rugosa | Rorug04G0235200 |
| rosa_samantha | Rh4AG290800 Rh4BG296700 Rh4CG312300 Rh4DG293700 |
| rosa_wichuraiana | Rw4G025190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 451 |
| AccB1I | GGYRCC | 1 cut(s) | 451 |
| AciI | CCGC | 1 cut(s) | 5 |
| AclWI | GGATC | 1 cut(s) | 230 |
| AfaI | GTAC | 1 cut(s) | 453 |
| AflII | CTTAAG | 1 cut(s) | 179 |
| AluBI | AGCT | 6 cut(s) | 130, 207, 324, 419, 431, 493 |
| AluI | AGCT | 6 cut(s) | 130, 207, 324, 419, 431, 493 |
| Alw21I | GWGCWC | 1 cut(s) | 132 |
| Alw26I | GTCTC | 1 cut(s) | 366 |
| AlwI | GGATC | 1 cut(s) | 230 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 207 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 405 |
| Asp718I | GGTACC | 1 cut(s) | 451 |
| AsuHPI | GGTGA | 1 cut(s) | 296 |
| BanI | GGYRCC | 1 cut(s) | 451 |
| BanII | GRGCYC | 1 cut(s) | 132 |
| BbsI | GAAGAC | 1 cut(s) | 339 |
| Bbv12I | GWGCWC | 1 cut(s) | 132 |
| BccI | CCATC | 1 cut(s) | 71 |
| BclI | TGATCA | 1 cut(s) | 505 |
| BcoDI | GTCTC | 1 cut(s) | 366 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BfmI | CTRYAG | 1 cut(s) | 199 |
| BfrI | CTTAAG | 1 cut(s) | 179 |
| BmiI | GGNNCC | 1 cut(s) | 453 |
| BmsI | GCATC | 1 cut(s) | 24 |
| BpiI | GAAGAC | 1 cut(s) | 339 |
| Bsa29I | ATCGAT | 2 cut(s) | 32, 248 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 52, 82 |
| Bse1I | ACTGG | 1 cut(s) | 279 |
| BseCI | ATCGAT | 2 cut(s) | 32, 248 |
| BseMII | CTCAG | 3 cut(s) | 126, 145, 503 |
| BseNI | ACTGG | 1 cut(s) | 279 |
| BshNI | GGYRCC | 1 cut(s) | 451 |
| BshVI | ATCGAT | 2 cut(s) | 32, 248 |
| BsiHKAI | GWGCWC | 1 cut(s) | 132 |
| BsmAI | GTCTC | 1 cut(s) | 366 |
| BsmBI | CGTCTC | 1 cut(s) | 366 |
| Bsp1286I | GDGCHC | 1 cut(s) | 132 |
| Bsp143I | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 3 cut(s) | 125, 144, 502 |
| BspDI | ATCGAT | 2 cut(s) | 32, 248 |
| BspLI | GGNNCC | 1 cut(s) | 453 |
| BspPI | GGATC | 1 cut(s) | 230 |
| BspT107I | GGYRCC | 1 cut(s) | 451 |
| BspTI | CTTAAG | 1 cut(s) | 179 |
| BsrI | ACTGG | 1 cut(s) | 279 |
| BssMI | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| Bst4CI | ACNGT | 2 cut(s) | 168, 301 |
| Bst6I | CTCTTC | 1 cut(s) | 336 |
| BstAFI | CTTAAG | 1 cut(s) | 179 |
| BstDEI | CTNAG | 3 cut(s) | 112, 131, 489 |
| BstKTI | GATC | 6 cut(s) | 32, 58, 111, 178, 238, 508 |
| BstMAI | GTCTC | 1 cut(s) | 366 |
| BstMBI | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| BstSFI | CTRYAG | 1 cut(s) | 199 |
| BstV2I | GAAGAC | 1 cut(s) | 339 |
| BstX2I | RGATCY | 1 cut(s) | 235 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 281 |
| BstYI | RGATCY | 1 cut(s) | 235 |
| Bsu15I | ATCGAT | 2 cut(s) | 32, 248 |
| BsuTUI | ATCGAT | 2 cut(s) | 32, 248 |
| BtgZI | GCGATG | 1 cut(s) | 108 |
| BtsIMutI | CAGTG | 2 cut(s) | 173, 286 |
| CaiI | CAGNNNCTG | 1 cut(s) | 207 |
| ClaI | ATCGAT | 2 cut(s) | 32, 248 |
| Csp6I | GTAC | 1 cut(s) | 452 |
| CviAII | CATG | 1 cut(s) | 448 |
| CviJI | RGCY | 6 cut(s) | 130, 207, 324, 419, 431, 493 |
| CviKI_1 | RGCY | 6 cut(s) | 130, 207, 324, 419, 431, 493 |
| CviQI | GTAC | 1 cut(s) | 452 |
| DdeI | CTNAG | 3 cut(s) | 112, 131, 489 |
| DpnI | GATC | 6 cut(s) | 31, 57, 110, 177, 237, 507 |
| DpnII | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| Eam1104I | CTCTTC | 1 cut(s) | 336 |
| EarI | CTCTTC | 1 cut(s) | 336 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Ecl136II | GAGCTC | 1 cut(s) | 130 |
| Eco24I | GRGCYC | 1 cut(s) | 132 |
| Eco53kI | GAGCTC | 1 cut(s) | 130 |
| EcoICRI | GAGCTC | 1 cut(s) | 130 |
| EcoT38I | GRGCYC | 1 cut(s) | 132 |
| Esp3I | CGTCTC | 1 cut(s) | 366 |
| FaeI | CATG | 1 cut(s) | 451 |
| FaiI | YATR | 7 cut(s) | 11, 71, 89, 102, 267, 333, 449 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 393, 425 |
| FatI | CATG | 1 cut(s) | 447 |
| FbaI | TGATCA | 1 cut(s) | 505 |
| FriOI | GRGCYC | 1 cut(s) | 132 |
| FspBI | CTAG | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 451 |
| HindIII | AAGCTT | 1 cut(s) | 429 |
| HinfI | GANTC | 5 cut(s) | 120, 253, 287, 344, 356 |
| HphI | GGTGA | 1 cut(s) | 296 |
| Hpy166II | GTNNAC | 1 cut(s) | 47 |
| Hpy188I | TCNGA | 5 cut(s) | 60, 115, 240, 313, 355 |
| Hpy188III | TCNNGA | 5 cut(s) | 23, 106, 173, 294, 372 |
| Hpy8I | GTNNAC | 1 cut(s) | 47 |
| HpyAV | CCTTC | 2 cut(s) | 162, 375 |
| HpyCH4III | ACNGT | 2 cut(s) | 168, 301 |
| HpyCH4V | TGCA | 4 cut(s) | 37, 269, 426, 485 |
| HpyF3I | CTNAG | 3 cut(s) | 112, 131, 489 |
| Hsp92II | CATG | 1 cut(s) | 451 |
| KpnI | GGTACC | 1 cut(s) | 455 |
| Ksp22I | TGATCA | 1 cut(s) | 505 |
| Kzo9I | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| LmnI | GCTCC | 1 cut(s) | 127 |
| LpnPI | CCDG | 5 cut(s) | 171, 193, 279, 292, 405 |
| LweI | GCATC | 1 cut(s) | 24 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MaeIII | GTNAC | 1 cut(s) | 260 |
| MalI | GATC | 6 cut(s) | 31, 57, 110, 177, 237, 507 |
| MboI | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| MboII | GAAGA | 5 cut(s) | 245, 326, 339, 353, 413 |
| MflI | RGATCY | 1 cut(s) | 235 |
| MhlI | GDGCHC | 1 cut(s) | 132 |
| MluCI | AATT | 1 cut(s) | 40 |
| MlyI | GAGTC | 3 cut(s) | 262, 353, 365 |
| MnlI | CCTC | 1 cut(s) | 382 |
| MroXI | GAANNNNTTC | 1 cut(s) | 405 |
| MseI | TTAA | 3 cut(s) | 180, 437, 465 |
| MspCI | CTTAAG | 1 cut(s) | 179 |
| NdeII | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| NlaIII | CATG | 1 cut(s) | 451 |
| NlaIV | GGNNCC | 1 cut(s) | 453 |
| PdmI | GAANNNNTTC | 1 cut(s) | 405 |
| PfeI | GAWTC | 2 cut(s) | 120, 287 |
| PleI | GAGTC | 3 cut(s) | 261, 352, 364 |
| PpsI | GAGTC | 3 cut(s) | 261, 352, 364 |
| Psp124BI | GAGCTC | 1 cut(s) | 132 |
| PspN4I | GGNNCC | 1 cut(s) | 453 |
| PstNI | CAGNNNCTG | 1 cut(s) | 207 |
| PsuI | RGATCY | 1 cut(s) | 235 |
| RsaI | GTAC | 1 cut(s) | 453 |
| RsaNI | GTAC | 1 cut(s) | 452 |
| SacI | GAGCTC | 1 cut(s) | 132 |
| SaqAI | TTAA | 3 cut(s) | 180, 437, 465 |
| Sau3AI | GATC | 6 cut(s) | 29, 55, 108, 175, 235, 505 |
| SchI | GAGTC | 3 cut(s) | 262, 353, 365 |
| SduI | GDGCHC | 1 cut(s) | 132 |
| SetI | ASST | 7 cut(s) | 132, 209, 326, 421, 433, 457, 495 |
| SfaNI | GCATC | 1 cut(s) | 24 |
| SfcI | CTRYAG | 1 cut(s) | 199 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| Sse9I | AATT | 1 cut(s) | 40 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SspMI | CTAG | 1 cut(s) | 23 |
| SstI | GAGCTC | 1 cut(s) | 132 |
| TaaI | ACNGT | 2 cut(s) | 168, 301 |
| TaqI | TCGA | 2 cut(s) | 32, 248 |
| TasI | AATT | 1 cut(s) | 40 |
| TfiI | GAWTC | 2 cut(s) | 120, 287 |
| Tru1I | TTAA | 3 cut(s) | 180, 437, 465 |
| Tru9I | TTAA | 3 cut(s) | 180, 437, 465 |
| TscAI | CASTG | 2 cut(s) | 173, 286 |
| TspDTI | ATGAA | 6 cut(s) | 111, 297, 339, 348, 357, 436 |
| TspRI | CASTG | 2 cut(s) | 173, 286 |
| Vha464I | CTTAAG | 1 cut(s) | 179 |
| XbaI | TCTAGA | 1 cut(s) | 22 |
| XmnI | GAANNNNTTC | 1 cut(s) | 405 |
| XspI | CTAG | 1 cut(s) | 23 |