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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28530 AT1G28530 |
| fragaria_vesca | FvH4_3g08370 |
| malus_domestica | MD05G1308100.v1.1 |
| prunus_persica | Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 |
| pyrus_communis | pycom05g28480 |
| rosa_chinensis | RchiOBHm_Chr5g0009531 |
| rosa_laevigata | RLG00000031669 |
| rosa_multiflora | Rmu_sc0002711.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00066600 Rroxscaffold_1G00067300 |
| rosa_rugosa | Rorug04G0444100 Rorug04G0444200 |
| rosa_samantha | Rh5AG075600 Rh5BG070800 Rh5CG083500 Rh5DG071200 |
| rosa_wichuraiana | Rw5G006970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1584 |
| Acc36I | ACCTGC | 1 cut(s) | 580 |
| AccB1I | GGYRCC | 1 cut(s) | 1460 |
| AccBSI | CCGCTC | 1 cut(s) | 668 |
| AciI | CCGC | 9 cut(s) | 193, 261, 288, 427, 430, 508, 666, 969, 1389 |
| AclWI | GGATC | 3 cut(s) | 350, 358, 453 |
| AcoI | YGGCCR | 2 cut(s) | 159, 1227 |
| AcsI | RAATTY | 6 cut(s) | 55, 124, 853, 1208, 1236, 1798 |
| AcuI | CTGAAG | 2 cut(s) | 1110, 1344 |
| AfaI | GTAC | 4 cut(s) | 200, 235, 994, 1479 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 157, 892, 1425, 1470 |
| AflII | CTTAAG | 1 cut(s) | 1745 |
| AgsI | TTSAA | 9 cut(s) | 61, 132, 674, 765, 859, 1112, 1207, 1492, 1520 |
| AjnI | CCWGG | 8 cut(s) | 544, 934, 1130, 1156, 1463, 1602, 1723, 1738 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1260, 1292 |
| Alw26I | GTCTC | 6 cut(s) | 230, 326, 438, 453, 762, 1548 |
| AlwI | GGATC | 3 cut(s) | 350, 358, 453 |
| Ama87I | CYCGRG | 1 cut(s) | 582 |
| AoxI | GGCC | 3 cut(s) | 159, 931, 1227 |
| ApeKI | GCWGC | 8 cut(s) | 263, 266, 269, 511, 1259, 1262, 1452, 1676 |
| ApoI | RAATTY | 6 cut(s) | 55, 124, 853, 1208, 1236, 1798 |
| AseI | ATTAAT | 1 cut(s) | 1787 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 689, 1056 |
| AspLEI | GCGC | 1 cut(s) | 1585 |
| AspS9I | GGNCC | 1 cut(s) | 932 |
| AsuC2I | CCSGG | 3 cut(s) | 345, 1305, 1655 |
| AsuHPI | GGTGA | 3 cut(s) | 293, 1213, 1745 |
| AsuII | TTCGAA | 1 cut(s) | 573 |
| AvaI | CYCGRG | 1 cut(s) | 582 |
| AxyI | CCTNAGG | 1 cut(s) | 360 |
| BalI | TGGCCA | 1 cut(s) | 1229 |
| BanI | GGYRCC | 1 cut(s) | 1460 |
| BbsI | GAAGAC | 3 cut(s) | 1119, 1268, 1572 |
| BbvI | GCAGC | 8 cut(s) | 250, 253, 256, 523, 1246, 1274, 1464, 1663 |
| BccI | CCATC | 2 cut(s) | 164, 306 |
| BciT130I | CCWGG | 8 cut(s) | 546, 936, 1132, 1158, 1465, 1604, 1725, 1740 |
| BciVI | GTATCC | 1 cut(s) | 1311 |
| BclI | TGATCA | 1 cut(s) | 247 |
| BcnI | CCSGG | 3 cut(s) | 345, 1305, 1655 |
| BcoDI | GTCTC | 6 cut(s) | 230, 326, 438, 453, 762, 1548 |
| BfaI | CTAG | 4 cut(s) | 453, 530, 1445, 1692 |
| BfmI | CTRYAG | 2 cut(s) | 1260, 1420 |
| BfrI | CTTAAG | 1 cut(s) | 1745 |
| BfuAI | ACCTGC | 1 cut(s) | 580 |
| BfuI | GTATCC | 1 cut(s) | 1311 |
| BmeT110I | CYCGRG | 1 cut(s) | 582 |
| BmgT120I | GGNCC | 1 cut(s) | 932 |
| BmiI | GGNNCC | 2 cut(s) | 1462, 1640 |
| BmrI | ACTGGG | 1 cut(s) | 1681 |
| BmsI | GCATC | 3 cut(s) | 669, 1405, 1586 |
| BmuI | ACTGGG | 1 cut(s) | 1681 |
| BpiI | GAAGAC | 3 cut(s) | 1119, 1268, 1572 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1741, 1773 |
| BpmI | CTGGAG | 2 cut(s) | 567, 1045 |
| Bpu14I | TTCGAA | 1 cut(s) | 573 |
| BpuEI | CTTGAG | 4 cut(s) | 848, 1037, 1394, 1703 |
| BpuMI | CCSGG | 3 cut(s) | 345, 1305, 1655 |
| Bsa29I | ATCGAT | 1 cut(s) | 65 |
| BsaBI | GATNNNNATC | 2 cut(s) | 297, 702 |
| BsaI | GGTCTC | 1 cut(s) | 438 |
| BsaJI | CCNNGG | 5 cut(s) | 343, 934, 1130, 1224, 1724 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 157, 892, 1425, 1470 |
| Bse118I | RCCGGY | 1 cut(s) | 885 |
| Bse1I | ACTGG | 5 cut(s) | 838, 984, 1035, 1230, 1676 |
| Bse21I | CCTNAGG | 1 cut(s) | 360 |
| Bse8I | GATNNNNATC | 2 cut(s) | 297, 702 |
| BseBI | CCWGG | 8 cut(s) | 546, 936, 1132, 1158, 1465, 1604, 1725, 1740 |
| BseCI | ATCGAT | 1 cut(s) | 65 |
| BseDI | CCNNGG | 5 cut(s) | 343, 934, 1130, 1224, 1724 |
| BseGI | GGATG | 3 cut(s) | 599, 1420, 1616 |
| BseJI | GATNNNNATC | 2 cut(s) | 297, 702 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 157, 892, 1425, 1470 |
| BseMII | CTCAG | 4 cut(s) | 235, 432, 1295, 1362 |
| BseNI | ACTGG | 5 cut(s) | 838, 984, 1035, 1230, 1676 |
| BseRI | GAGGAG | 1 cut(s) | 152 |
| BseXI | GCAGC | 8 cut(s) | 250, 253, 256, 523, 1246, 1274, 1464, 1663 |
| BseYI | CCCAGC | 1 cut(s) | 1425 |
| BshFI | GGCC | 3 cut(s) | 161, 933, 1229 |
| BshNI | GGYRCC | 1 cut(s) | 1460 |
| BshVI | ATCGAT | 1 cut(s) | 65 |
| BsiHKCI | CYCGRG | 1 cut(s) | 582 |
| BsiSI | CCGG | 4 cut(s) | 345, 886, 1305, 1654 |
| BsiWI | CGTACG | 1 cut(s) | 198 |
| BslFI | GGGAC | 1 cut(s) | 908 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 157, 892, 1425, 1470 |
| BsmAI | GTCTC | 6 cut(s) | 230, 326, 438, 453, 762, 1548 |
| BsmBI | CGTCTC | 1 cut(s) | 1548 |
| BsmFI | GGGAC | 1 cut(s) | 908 |
| BsnI | GGCC | 3 cut(s) | 161, 933, 1229 |
| Bso31I | GGTCTC | 1 cut(s) | 438 |
| BsoBI | CYCGRG | 1 cut(s) | 582 |
| Bsp119I | TTCGAA | 1 cut(s) | 573 |
| Bsp143I | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| Bsp19I | CCATGG | 1 cut(s) | 1224 |
| BspACI | CCGC | 9 cut(s) | 193, 261, 288, 427, 430, 508, 666, 969, 1389 |
| BspANI | GGCC | 3 cut(s) | 161, 933, 1229 |
| BspCNI | CTCAG | 4 cut(s) | 234, 433, 1294, 1363 |
| BspDI | ATCGAT | 1 cut(s) | 65 |
| BspLI | GGNNCC | 2 cut(s) | 1462, 1640 |
| BspMAI | CTGCAG | 1 cut(s) | 1264 |
| BspMI | ACCTGC | 1 cut(s) | 580 |
| BspPI | GGATC | 3 cut(s) | 350, 358, 453 |
| BspQI | GCTCTTC | 1 cut(s) | 675 |
| BspT104I | TTCGAA | 1 cut(s) | 573 |
| BspT107I | GGYRCC | 1 cut(s) | 1460 |
| BspTI | CTTAAG | 1 cut(s) | 1745 |
| BspTNI | GGTCTC | 1 cut(s) | 438 |
| BsrBI | CCGCTC | 1 cut(s) | 668 |
| BsrFI | RCCGGY | 1 cut(s) | 885 |
| BsrI | ACTGG | 5 cut(s) | 838, 984, 1035, 1230, 1676 |
| BssAI | RCCGGY | 1 cut(s) | 885 |
| BssECI | CCNNGG | 5 cut(s) | 343, 934, 1130, 1224, 1724 |
| BssMI | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| BssT1I | CCWWGG | 1 cut(s) | 1224 |
| Bst2UI | CCWGG | 8 cut(s) | 546, 936, 1132, 1158, 1465, 1604, 1725, 1740 |
| Bst4CI | ACNGT | 4 cut(s) | 238, 278, 337, 370 |
| Bst6I | CTCTTC | 3 cut(s) | 47, 675, 1551 |
| BstAFI | CTTAAG | 1 cut(s) | 1745 |
| BstBI | TTCGAA | 1 cut(s) | 573 |
| BstC8I | GCNNGC | 1 cut(s) | 414 |
| BstDSI | CCRYGG | 1 cut(s) | 1224 |
| BstF5I | GGATG | 3 cut(s) | 599, 1420, 1616 |
| BstHHI | GCGC | 1 cut(s) | 1585 |
| BstKTI | GATC | 7 cut(s) | 250, 353, 358, 448, 1440, 1525, 1807 |
| BstMAI | GTCTC | 6 cut(s) | 230, 326, 438, 453, 762, 1548 |
| BstMBI | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 260, 269, 548, 1256, 1735 |
| BstNI | CCWGG | 8 cut(s) | 546, 936, 1132, 1158, 1465, 1604, 1725, 1740 |
| BstSFI | CTRYAG | 2 cut(s) | 1260, 1420 |
| BstV1I | GCAGC | 8 cut(s) | 250, 253, 256, 523, 1246, 1274, 1464, 1663 |
| BstV2I | GAAGAC | 3 cut(s) | 1119, 1268, 1572 |
| BstX2I | RGATCY | 2 cut(s) | 350, 445 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1079 |
| BstYI | RGATCY | 2 cut(s) | 350, 445 |
| Bsu15I | ATCGAT | 1 cut(s) | 65 |
| Bsu36I | CCTNAGG | 1 cut(s) | 360 |
| BsuI | GTATCC | 1 cut(s) | 1311 |
| BsuRI | GGCC | 3 cut(s) | 161, 933, 1229 |
| BsuTUI | ATCGAT | 1 cut(s) | 65 |
| BtgI | CCRYGG | 1 cut(s) | 1224 |
| BtgZI | GCGATG | 1 cut(s) | 497 |
| BtsCI | GGATG | 3 cut(s) | 599, 1420, 1616 |
| BtsIMutI | CAGTG | 3 cut(s) | 1042, 1237, 1669 |
| BveI | ACCTGC | 1 cut(s) | 580 |
| Cac8I | GCNNGC | 1 cut(s) | 414 |
| CfoI | GCGC | 1 cut(s) | 1585 |
| Cfr10I | RCCGGY | 1 cut(s) | 885 |
| Cfr13I | GGNCC | 1 cut(s) | 932 |
| ClaI | ATCGAT | 1 cut(s) | 65 |
| CseI | GACGC | 1 cut(s) | 1577 |
| CsiI | ACCWGGT | 1 cut(s) | 1602 |
| Csp6I | GTAC | 4 cut(s) | 199, 234, 993, 1478 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1638, 1673 |
| CviAII | CATG | 3 cut(s) | 186, 1146, 1225 |
| CviQI | GTAC | 4 cut(s) | 199, 234, 993, 1478 |
| DpnI | GATC | 7 cut(s) | 249, 352, 357, 447, 1439, 1524, 1806 |
| DpnII | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| EaeI | YGGCCR | 2 cut(s) | 159, 1227 |
| Eam1104I | CTCTTC | 3 cut(s) | 47, 675, 1551 |
| EarI | CTCTTC | 3 cut(s) | 47, 675, 1551 |
| Eco130I | CCWWGG | 1 cut(s) | 1224 |
| Eco31I | GGTCTC | 1 cut(s) | 438 |
| Eco32I | GATATC | 1 cut(s) | 1591 |
| Eco57I | CTGAAG | 2 cut(s) | 1110, 1344 |
| Eco81I | CCTNAGG | 1 cut(s) | 360 |
| Eco88I | CYCGRG | 1 cut(s) | 582 |
| EcoRI | GAATTC | 2 cut(s) | 124, 1798 |
| EcoRII | CCWGG | 8 cut(s) | 544, 934, 1130, 1156, 1463, 1602, 1723, 1738 |
| EcoRV | GATATC | 1 cut(s) | 1591 |
| EcoT14I | CCWWGG | 1 cut(s) | 1224 |
| EcoT22I | ATGCAT | 1 cut(s) | 662 |
| ErhI | CCWWGG | 1 cut(s) | 1224 |
| Esp3I | CGTCTC | 1 cut(s) | 1548 |
| FaeI | CATG | 3 cut(s) | 189, 1149, 1228 |
| FaqI | GGGAC | 1 cut(s) | 908 |
| FatI | CATG | 3 cut(s) | 185, 1145, 1224 |
| FauI | CCCGC | 1 cut(s) | 976 |
| FbaI | TGATCA | 1 cut(s) | 247 |
| FokI | GGATG | 3 cut(s) | 586, 1427, 1603 |
| FspBI | CTAG | 4 cut(s) | 453, 530, 1445, 1692 |
| FspI | TGCGCA | 1 cut(s) | 1584 |
| GlaI | GCGC | 1 cut(s) | 1584 |
| GsaI | CCCAGC | 1 cut(s) | 1429 |
| GsuI | CTGGAG | 2 cut(s) | 567, 1045 |
| HaeIII | GGCC | 3 cut(s) | 161, 933, 1229 |
| HapII | CCGG | 4 cut(s) | 345, 886, 1305, 1654 |
| HgaI | GACGC | 1 cut(s) | 1577 |
| HhaI | GCGC | 1 cut(s) | 1585 |
| Hin1II | CATG | 3 cut(s) | 189, 1149, 1228 |
| Hin6I | GCGC | 1 cut(s) | 1583 |
| HinP1I | GCGC | 1 cut(s) | 1583 |
| HincII | GTYRAC | 2 cut(s) | 375, 1402 |
| HindII | GTYRAC | 2 cut(s) | 375, 1402 |
| HindIII | AAGCTT | 1 cut(s) | 1013 |
| HinfI | GANTC | 6 cut(s) | 67, 164, 1364, 1379, 1666, 1750 |
| HpaII | CCGG | 4 cut(s) | 345, 886, 1305, 1654 |
| HphI | GGTGA | 3 cut(s) | 293, 1213, 1745 |
| Hpy166II | GTNNAC | 2 cut(s) | 375, 1402 |
| Hpy188III | TCNNGA | 6 cut(s) | 51, 305, 331, 584, 765, 1550 |
| Hpy8I | GTNNAC | 2 cut(s) | 375, 1402 |
| HpyAV | CCTTC | 5 cut(s) | 57, 169, 613, 841, 1616 |
| HpyCH4III | ACNGT | 4 cut(s) | 238, 278, 337, 370 |
| HpyCH4IV | ACGT | 1 cut(s) | 197 |
| HpyCH4V | TGCA | 9 cut(s) | 542, 647, 660, 787, 866, 1004, 1169, 1262, 1817 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 260, 269, 548, 1256, 1735 |
| HpySE526I | ACGT | 1 cut(s) | 197 |
| Hsp92II | CATG | 3 cut(s) | 189, 1149, 1228 |
| HspAI | GCGC | 1 cut(s) | 1583 |
| Ksp22I | TGATCA | 1 cut(s) | 247 |
| Kzo9I | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| LguI | GCTCTTC | 1 cut(s) | 675 |
| LmnI | GCTCC | 1 cut(s) | 548 |
| Lsp1109I | GCAGC | 8 cut(s) | 250, 253, 256, 523, 1246, 1274, 1464, 1663 |
| LweI | GCATC | 3 cut(s) | 669, 1405, 1586 |
| MabI | ACCWGGT | 1 cut(s) | 1602 |
| MaeI | CTAG | 4 cut(s) | 453, 530, 1445, 1692 |
| MaeII | ACGT | 1 cut(s) | 197 |
| MaeIII | GTNAC | 3 cut(s) | 1219, 1531, 1751 |
| MalI | GATC | 7 cut(s) | 249, 352, 357, 447, 1439, 1524, 1806 |
| MbiI | CCGCTC | 1 cut(s) | 668 |
| MboI | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| MflI | RGATCY | 2 cut(s) | 350, 445 |
| MlsI | TGGCCA | 1 cut(s) | 1229 |
| MluNI | TGGCCA | 1 cut(s) | 1229 |
| MlyI | GAGTC | 1 cut(s) | 1759 |
| MmeI | TCCRAC | 5 cut(s) | 897, 1060, 1356, 1666, 1758 |
| Mox20I | TGGCCA | 1 cut(s) | 1229 |
| Mph1103I | ATGCAT | 1 cut(s) | 662 |
| MroXI | GAANNNNTTC | 2 cut(s) | 689, 1056 |
| MscI | TGGCCA | 1 cut(s) | 1229 |
| MseI | TTAA | 5 cut(s) | 257, 405, 1010, 1746, 1787 |
| MslI | CAYNNNNRTG | 2 cut(s) | 184, 303 |
| Msp20I | TGGCCA | 1 cut(s) | 1229 |
| MspA1I | CMGCKG | 3 cut(s) | 263, 514, 1425 |
| MspCI | CTTAAG | 1 cut(s) | 1745 |
| MspI | CCGG | 4 cut(s) | 345, 886, 1305, 1654 |
| MvaI | CCWGG | 8 cut(s) | 546, 936, 1132, 1158, 1465, 1604, 1725, 1740 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 260, 269, 548, 1256, 1735 |
| NciI | CCSGG | 3 cut(s) | 345, 1305, 1655 |
| NcoI | CCATGG | 1 cut(s) | 1224 |
| NdeII | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| NlaIII | CATG | 3 cut(s) | 189, 1149, 1228 |
| NlaIV | GGNNCC | 2 cut(s) | 1462, 1640 |
| NmeAIII | GCCGAG | 1 cut(s) | 196 |
| NmuCI | GTSAC | 2 cut(s) | 1219, 1751 |
| NsbI | TGCGCA | 1 cut(s) | 1584 |
| NsiI | ATGCAT | 1 cut(s) | 662 |
| NspV | TTCGAA | 1 cut(s) | 573 |
| PaeR7I | CTCGAG | 1 cut(s) | 582 |
| PciSI | GCTCTTC | 1 cut(s) | 675 |
| PdmI | GAANNNNTTC | 2 cut(s) | 689, 1056 |
| PfeI | GAWTC | 5 cut(s) | 67, 164, 1364, 1379, 1666 |
| Pfl23II | CGTACG | 1 cut(s) | 198 |
| PfoI | TCCNGGA | 2 cut(s) | 1156, 1303 |
| PleI | GAGTC | 1 cut(s) | 1758 |
| PpsI | GAGTC | 1 cut(s) | 1758 |
| PshBI | ATTAAT | 1 cut(s) | 1787 |
| Psp6I | CCWGG | 8 cut(s) | 544, 934, 1130, 1156, 1463, 1602, 1723, 1738 |
| PspFI | CCCAGC | 1 cut(s) | 1425 |
| PspGI | CCWGG | 8 cut(s) | 544, 934, 1130, 1156, 1463, 1602, 1723, 1738 |
| PspLI | CGTACG | 1 cut(s) | 198 |
| PspN4I | GGNNCC | 2 cut(s) | 1462, 1640 |
| PspPI | GGNCC | 1 cut(s) | 932 |
| PstI | CTGCAG | 1 cut(s) | 1264 |
| PsuI | RGATCY | 2 cut(s) | 350, 445 |
| PvuII | CAGCTG | 2 cut(s) | 514, 1425 |
| RsaI | GTAC | 4 cut(s) | 200, 235, 994, 1479 |
| RsaNI | GTAC | 4 cut(s) | 199, 234, 993, 1478 |
| RseI | CAYNNNNRTG | 2 cut(s) | 184, 303 |
| SapI | GCTCTTC | 1 cut(s) | 675 |
| SaqAI | TTAA | 5 cut(s) | 257, 405, 1010, 1746, 1787 |
| Sau3AI | GATC | 7 cut(s) | 247, 350, 355, 445, 1437, 1522, 1804 |
| Sau96I | GGNCC | 1 cut(s) | 932 |
| SchI | GAGTC | 1 cut(s) | 1759 |
| SexAI | ACCWGGT | 1 cut(s) | 1602 |
| SfaNI | GCATC | 3 cut(s) | 669, 1405, 1586 |
| SfcI | CTRYAG | 2 cut(s) | 1260, 1420 |
| Sfr274I | CTCGAG | 1 cut(s) | 582 |
| SfuI | TTCGAA | 1 cut(s) | 573 |
| SlaI | CTCGAG | 1 cut(s) | 582 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 184, 303 |
| SmlI | CTYRAG | 6 cut(s) | 582, 827, 1016, 1409, 1718, 1745 |
| SmoI | CTYRAG | 6 cut(s) | 582, 827, 1016, 1409, 1718, 1745 |
| SsiI | CCGC | 9 cut(s) | 193, 261, 288, 427, 430, 508, 666, 969, 1389 |
| SspI | AATATT | 1 cut(s) | 962 |
| SspMI | CTAG | 4 cut(s) | 453, 530, 1445, 1692 |
| StyI | CCWWGG | 1 cut(s) | 1224 |
| TaaI | ACNGT | 4 cut(s) | 238, 278, 337, 370 |
| TaiI | ACGT | 1 cut(s) | 200 |
| TaqI | TCGA | 7 cut(s) | 52, 65, 330, 573, 583, 696, 976 |
| TatI | WGTACW | 1 cut(s) | 992 |
| TauI | GCSGC | 3 cut(s) | 290, 430, 511 |
| TfiI | GAWTC | 5 cut(s) | 67, 164, 1364, 1379, 1666 |
| Tru1I | TTAA | 5 cut(s) | 257, 405, 1010, 1746, 1787 |
| Tru9I | TTAA | 5 cut(s) | 257, 405, 1010, 1746, 1787 |
| TscAI | CASTG | 3 cut(s) | 1042, 1237, 1676 |
| TseFI | GTSAC | 2 cut(s) | 1219, 1751 |
| TseI | GCWGC | 8 cut(s) | 263, 266, 269, 511, 1259, 1262, 1452, 1676 |
| Tsp45I | GTSAC | 2 cut(s) | 1219, 1751 |
| TspDTI | ATGAA | 6 cut(s) | 639, 746, 1197, 1201, 1371, 1578 |
| TspGWI | ACGGA | 2 cut(s) | 140, 714 |
| TspRI | CASTG | 3 cut(s) | 1042, 1237, 1676 |
| Vha464I | CTTAAG | 1 cut(s) | 1745 |
| VspI | ATTAAT | 1 cut(s) | 1787 |
| XapI | RAATTY | 6 cut(s) | 55, 124, 853, 1208, 1236, 1798 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 913 |
| XhoI | CTCGAG | 1 cut(s) | 582 |
| XmnI | GAANNNNTTC | 2 cut(s) | 689, 1056 |
| XspI | CTAG | 4 cut(s) | 453, 530, 1445, 1692 |
| Zsp2I | ATGCAT | 1 cut(s) | 662 |