Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0010401

Physical Location & Seq

Genomic Coordinates Forward (+)

5742938 .. 5748132

Gene Structure 5195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG070800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGCGTCCGTCCACTCTCTCTTCCTCCATCCACCTCTCGTCTCCTTCACACGACCCAGTCTCTGCTCTCTCTACTCCAAACCCCGAAATCCCCGTTTTACCCTCGCCTGCTCTTCTTCTTCTCGGAAATCGGCTCCGGCCACCGAGCAGGAGGTCCTCCAGGCGATTTCCGAGTCCTCCGAGAAGAGCCTGCCGTGCGTGAGGACGTACGAGAACGAATTGGCGCGGCTGGGACTAGTCGGAGCCGTGGATTTTCAGCAGGCTCTGACGGCGGCCGCCGCCGACGGAGGAGAGGCCGCCGACGAGCACATTAGGGAGGGCGTGCCCGCTATGGTTGTGGAGACTTTGTTCCCGGGTAACTCCGACCCGTACAGTACAATCTCGACCCGGCTGTTTCTTCCTGCTAGAAAAGTTAAAGAAAAAGCTGGTAAATTGAGAAGCTCCATCACTGAAGATATGCTGTCAACCACTACTTCTAGAAACATACTTTCTATGACATTTAGACAAGTAGTGTTAGAACTGCTCTGGAGCTTTCAACTAGTTGTTTTCAGACCTGGAACTCAAAGGAATATGAAGGATCTTGAGAACCCCAGAGAGGTCCCTGCATGTGTCACCCTTAGTTCATCAGACGAATGGATTTTATCTGTGCTCGCAGAAGTTGTCTGCATCTCTGCTCTTCAAAATACAGAAAAACAATTTCTTGAAGATTACACGGGCAAAACACCGAGTAATTTCCTTCATTGGTTTCGAAAGCCTAGAAGGACTGTATCAAAAGATTCCTCAGTTGTCATATACAAATTATTTGAAGATGAGATAGTTGAAAATGCCAAGAGTCTGCTCGAACATTTTCATTCCACGAAGAACAGTTTTAAGTCTGTAAAAGCAAAATCAAAGTGGTGGACACCATCTGCACTCTCTAAACTGGAAAAGATTGGTGGTCCGGAATTTAGTTCTTGGACTAGTGAGTATGTTCCAGCTTACAAGCTACAAATTGATGCTAATCGGCTTAAGGATGTGAAATTTGAAGGCTGGAGAAAATGTGGAGAAAATAGTTGGGAAGTTCTTTTGACACACTCCCAGATGGTTGGATTGGCTGATATAATAGATATGTACTATGAAGATCTTTACACCCTGCCTGATAAAGAACTATCTTGTGGTGTTATTGCAAGTTCCACCAACTTATCTACTAAAAAGACGGGCTCGTTCTTATTAAAATTGCTATCTGTCTCCCTTGCAAGTGGAATTCTTCTCGTTGCAATCAGTGCTCTTGGTCAATTTGGTTTACCTTATCTACATAAAGGTGGCAAGTACTTGAGAGAACACAGGTCTATTCCATCGTCTGAAGTTGATAGTGCACTAAATCAGTGTTCAGATGCCGTGAAGTTGGAAGCATTTTGCGAATCAGTTGTTAAAAAGATAAAAGATTCTCTGGGTTGGCCAGGTGAGATAACGTTGGAAACAAATGTGGGTGCTTGGACTGGCAAAGTACCAGATTATTTGAGGATGACTGTTGACGAAGACGTGCCAATCTCTCCCCCTTTAGATAAAATTGATGAAGACTTGAAAGCGTCGGCACAAGATATTGCTAGTTATCAGGTGGTTCTGTCAGCAGATGGCAAGATAGTGGGATTCCAACCTCTAAGCAGGGCTGCTGTTAACCATTGGGCTGCCAATCCCTTATCGAAGGAATTATATGGAGGAAGAAAGCTTTCTCCTGGGTTGACGGAACCTGGTCTCAAGGTCCAGTGCCCAGATGAGGTCGCTGTCATAGAGTTGTTGATGTCAGTAAAACCAGATGCATCATTTGCCTTGGCCCGGCCAGTTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

609

Amino Acids

67.25

Weight (kDa)

6.59

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28530 AT1G28530
fragaria_vesca	FvH4_3g08370
malus_domestica	MD05G1308100.v1.1
prunus_persica	Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1
pyrus_communis	pycom05g28480
rosa_chinensis	RchiOBHm_Chr5g0009531
rosa_laevigata	RLG00000031669
rosa_multiflora	Rmu_sc0002711.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066600 Rroxscaffold_1G00067300
rosa_rugosa	Rorug04G0444100 Rorug04G0444200
rosa_samantha	Rh5AG075600 Rh5BG070800 Rh5CG083500 Rh5DG071200
rosa_wichuraiana	Rw5G006970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	226
AccIII	TCCGGA	1 cut(s)	940
AciI	CCGC	6 cut(s)	226, 272, 276, 279, 297, 327
AclI	AACGTT	1 cut(s)	1451
AclWI	GGATC	1 cut(s)	585
AcoI	YGGCCR	4 cut(s)	138, 273, 1436, 1817
AcsI	RAATTY	3 cut(s)	944, 1019, 1242
AcuI	CTGAAG	2 cut(s)	471, 1362
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	6 cut(s)	209, 371, 376, 1112, 1310, 1488
AfiI	CCNNNNNNNGG	3 cut(s)	595, 1756, 1815
AflII	CTTAAG	1 cut(s)	1007
AgsI	TTSAA	7 cut(s)	536, 680, 704, 806, 821, 1025, 1564
AhlI	ACTAGT	3 cut(s)	235, 538, 959
AjiI	CACGTC	1 cut(s)	1522
AjnI	CCWGG	5 cut(s)	159, 553, 1438, 1714, 1729
AloI	GAACNNNNNNTCC	2 cut(s)	332, 364
AluBI	AGCT	6 cut(s)	425, 441, 531, 977, 985, 1708
AluI	AGCT	6 cut(s)	425, 441, 531, 977, 985, 1708
Alw21I	GWGCWC	4 cut(s)	309, 651, 1267, 1357
Alw26I	GTCTC	5 cut(s)	46, 65, 335, 1231, 1739
Alw44I	GTGCAC	1 cut(s)	1353
AlwI	GGATC	1 cut(s)	585
AlwNI	CAGNNNCTG	2 cut(s)	63, 265
Ama87I	CYCGRG	1 cut(s)	352
Aor13HI	TCCGGA	1 cut(s)	940
AoxI	GGCC	6 cut(s)	138, 273, 294, 1436, 1812, 1817
ApaLI	GTGCAC	1 cut(s)	1353
ApeKI	GCWGC	2 cut(s)	1649, 1667
ApoI	RAATTY	3 cut(s)	944, 1019, 1242
Asp700I	GAANNNNTTC	2 cut(s)	846, 1708
AspLEI	GCGC	1 cut(s)	226
AspS9I	GGNCC	5 cut(s)	154, 598, 938, 1741, 1813
AsuC2I	CCSGG	4 cut(s)	353, 354, 388, 1816
AsuHPI	GGTGA	2 cut(s)	604, 1454
AsuII	TTCGAA	1 cut(s)	748
AvaI	CYCGRG	1 cut(s)	352
AvaII	GGWCC	4 cut(s)	154, 598, 938, 1741
BaeGI	GKGCMC	3 cut(s)	327, 1357, 1751
BalI	TGGCCA	1 cut(s)	1438
BanII	GRGCYC	1 cut(s)	1202
BbsI	GAAGAC	2 cut(s)	1524, 1563
Bbv12I	GWGCWC	4 cut(s)	309, 651, 1267, 1357
BbvI	GCAGC	2 cut(s)	1636, 1654
BccI	CCATC	6 cut(s)	36, 452, 913, 1075, 1342, 1607
BceAI	ACGGC	4 cut(s)	178, 230, 285, 1361
BciT130I	CCWGG	5 cut(s)	161, 555, 1440, 1716, 1731
BcnI	CCSGG	4 cut(s)	353, 354, 388, 1816
BcoDI	GTCTC	5 cut(s)	46, 65, 335, 1231, 1739
BcuI	ACTAGT	3 cut(s)	235, 538, 959
BfaI	CTAG	7 cut(s)	236, 405, 477, 539, 756, 960, 1587
BfrI	CTTAAG	1 cut(s)	1007
BglII	AGATCT	1 cut(s)	1120
BisI	GCNGC	7 cut(s)	227, 273, 276, 279, 297, 1650, 1668
BlsI	GCNGC	7 cut(s)	228, 274, 277, 280, 298, 1651, 1669
BmcAI	AGTACT	1 cut(s)	1310
Bme1390I	CCNGG	9 cut(s)	161, 353, 354, 388, 555, 1440, 1716, 1731, 1816
Bme18I	GGWCC	4 cut(s)	154, 598, 938, 1741
BmeT110I	CYCGRG	1 cut(s)	352
BmgBI	CACGTC	1 cut(s)	1522
BmgT120I	GGNCC	5 cut(s)	154, 598, 938, 1741, 1813
BmiI	GGNNCC	4 cut(s)	135, 244, 600, 1728
BmrFI	CCNGG	9 cut(s)	161, 353, 354, 388, 555, 1440, 1716, 1731, 1816
BmrI	ACTGGG	1 cut(s)	51
BmsI	GCATC	5 cut(s)	675, 985, 1363, 1786, 1808
BmuI	ACTGGG	1 cut(s)	51
BpiI	GAAGAC	2 cut(s)	1524, 1563
BpmI	CTGGAG	3 cut(s)	143, 547, 1051
Bpu14I	TTCGAA	1 cut(s)	748
BpuEI	CTTGAG	3 cut(s)	602, 1333, 1721
BpuMI	CCSGG	4 cut(s)	353, 354, 388, 1816
BsaBI	GATNNNNATC	1 cut(s)	999
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1739
BsaJI	CCNNGG	4 cut(s)	246, 352, 1715, 1809
BsaWI	WCCGGW	1 cut(s)	940
BsaXI	ACNNNNNCTCC	4 cut(s)	332, 362, 1024, 1054
Bsc4I	CCNNNNNNNGG	3 cut(s)	595, 1756, 1815
Bse1I	ACTGG	5 cut(s)	57, 927, 1483, 1744, 1820
Bse8I	GATNNNNATC	1 cut(s)	999
BseAI	TCCGGA	1 cut(s)	940
BseBI	CCWGG	5 cut(s)	161, 555, 1440, 1716, 1731
BseDI	CCNNGG	4 cut(s)	246, 352, 1715, 1809
BseGI	GGATG	3 cut(s)	28, 1018, 1509
BseJI	GATNNNNATC	1 cut(s)	999
BseLI	CCNNNNNNNGG	3 cut(s)	595, 1756, 1815
BseMII	CTCAG	1 cut(s)	795
BseNI	ACTGG	5 cut(s)	57, 927, 1483, 1744, 1820
BseRI	GAGGAG	1 cut(s)	303
BseSI	GKGCMC	3 cut(s)	327, 1357, 1751
BseX3I	CGGCCG	1 cut(s)	273
BseXI	GCAGC	2 cut(s)	1636, 1654
BseYI	CCCAGC	1 cut(s)	229
BsgI	GTGCAG	1 cut(s)	894
Bsh1236I	CGCG	1 cut(s)	226
Bsh1285I	CGRYCG	1 cut(s)	276
BshFI	GGCC	6 cut(s)	140, 275, 296, 1438, 1814, 1819
BsiEI	CGRYCG	1 cut(s)	276
BsiHKAI	GWGCWC	4 cut(s)	309, 651, 1267, 1357
BsiHKCI	CYCGRG	1 cut(s)	352
BsiSI	CCGG	5 cut(s)	137, 353, 388, 941, 1816
BsiWI	CGTACG	1 cut(s)	207
BslFI	GGGAC	2 cut(s)	246, 584
BslI	CCNNNNNNNGG	3 cut(s)	595, 1756, 1815
BsmAI	GTCTC	5 cut(s)	46, 65, 335, 1231, 1739
BsmBI	CGTCTC	1 cut(s)	46
BsmFI	GGGAC	2 cut(s)	246, 584
BsnI	GGCC	6 cut(s)	140, 275, 296, 1438, 1814, 1819
Bso31I	GGTCTC	1 cut(s)	1739
BsoBI	CYCGRG	1 cut(s)	352
Bsp119I	TTCGAA	1 cut(s)	748
Bsp1286I	GDGCHC	7 cut(s)	309, 327, 651, 1202, 1267, 1357, 1751
Bsp13I	TCCGGA	1 cut(s)	940
Bsp143I	GATC	2 cut(s)	577, 1120
BspACI	CCGC	6 cut(s)	226, 272, 276, 279, 297, 327
BspANI	GGCC	6 cut(s)	140, 275, 296, 1438, 1814, 1819
BspCNI	CTCAG	1 cut(s)	794
BspEI	TCCGGA	1 cut(s)	940
BspFNI	CGCG	1 cut(s)	226
BspLI	GGNNCC	4 cut(s)	135, 244, 600, 1728
BspPI	GGATC	1 cut(s)	585
BspQI	GCTCTTC	3 cut(s)	118, 179, 681
BspT104I	TTCGAA	1 cut(s)	748
BspTI	CTTAAG	1 cut(s)	1007
BspTNI	GGTCTC	1 cut(s)	1739
BsrI	ACTGG	5 cut(s)	57, 927, 1483, 1744, 1820
BssECI	CCNNGG	4 cut(s)	246, 352, 1715, 1809
BssMI	GATC	2 cut(s)	577, 1120
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	1809
Bst2UI	CCWGG	5 cut(s)	161, 555, 1440, 1716, 1731
Bst4CI	ACNGT	4 cut(s)	374, 766, 866, 1510
Bst6I	CTCTTC	4 cut(s)	26, 118, 179, 681
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	1 cut(s)	1007
BstAPI	GCANNNNNTGC	2 cut(s)	1262, 1805
BstBI	TTCGAA	1 cut(s)	748
BstC8I	GCNNGC	6 cut(s)	109, 191, 261, 323, 327, 651
BstDEI	CTNAG	3 cut(s)	617, 781, 1640
BstDSI	CCRYGG	1 cut(s)	246
BstF5I	GGATG	3 cut(s)	28, 1018, 1509
BstFNI	CGCG	1 cut(s)	226
BstHHI	GCGC	1 cut(s)	226
BstKTI	GATC	2 cut(s)	580, 1123
BstMAI	GTCTC	5 cut(s)	46, 65, 335, 1231, 1739
BstMBI	GATC	2 cut(s)	577, 1120
BstMCI	CGRYCG	1 cut(s)	276
BstMWI	GCNNNNNNNGC	5 cut(s)	195, 269, 278, 1262, 1805
BstNI	CCWGG	5 cut(s)	161, 555, 1440, 1716, 1731
BstNSI	RCATGY	1 cut(s)	609
BstSCI	CCNGG	9 cut(s)	159, 351, 352, 386, 553, 1438, 1714, 1729, 1814
BstSLI	GKGCMC	3 cut(s)	327, 1357, 1751
BstUI	CGCG	1 cut(s)	226
BstV1I	GCAGC	2 cut(s)	1636, 1654
BstV2I	GAAGAC	2 cut(s)	1524, 1563
BstX2I	RGATCY	2 cut(s)	577, 1120
BstXI	CCANNNNNNTGG	1 cut(s)	1085
BstYI	RGATCY	2 cut(s)	577, 1120
BstZI	CGGCCG	1 cut(s)	273
BsuRI	GGCC	6 cut(s)	140, 275, 296, 1438, 1814, 1819
BtgI	CCRYGG	1 cut(s)	246
BtrI	CACGTC	1 cut(s)	1522
BtsCI	GGATG	3 cut(s)	28, 1018, 1509
BtsIMutI	CAGTG	4 cut(s)	447, 1267, 1370, 1751
Cac8I	GCNNGC	6 cut(s)	109, 191, 261, 323, 327, 651
CaiI	CAGNNNCTG	2 cut(s)	63, 265
CciNI	GCGGCCGC	1 cut(s)	273
CfoI	GCGC	1 cut(s)	226
Cfr13I	GGNCC	5 cut(s)	154, 598, 938, 1741, 1813
Cfr9I	CCCGGG	1 cut(s)	352
CseI	GACGC	1 cut(s)	1557
CsiI	ACCWGGT	1 cut(s)	1729
Csp6I	GTAC	6 cut(s)	208, 370, 375, 1111, 1309, 1487
CviAII	CATG	1 cut(s)	606
CviQI	GTAC	6 cut(s)	208, 370, 375, 1111, 1309, 1487
DdeI	CTNAG	3 cut(s)	617, 781, 1640
DpnI	GATC	2 cut(s)	579, 1122
DpnII	GATC	2 cut(s)	577, 1120
EaeI	YGGCCR	4 cut(s)	138, 273, 1436, 1817
EagI	CGGCCG	1 cut(s)	273
Eam1104I	CTCTTC	4 cut(s)	26, 118, 179, 681
EarI	CTCTTC	4 cut(s)	26, 118, 179, 681
EclXI	CGGCCG	1 cut(s)	273
Eco130I	CCWWGG	1 cut(s)	1809
Eco24I	GRGCYC	1 cut(s)	1202
Eco31I	GGTCTC	1 cut(s)	1739
Eco47I	GGWCC	4 cut(s)	154, 598, 938, 1741
Eco52I	CGGCCG	1 cut(s)	273
Eco57I	CTGAAG	2 cut(s)	471, 1362
Eco88I	CYCGRG	1 cut(s)	352
EcoO109I	RGGNCCY	2 cut(s)	154, 598
EcoRI	GAATTC	1 cut(s)	1242
EcoRII	CCWGG	5 cut(s)	159, 553, 1438, 1714, 1729
EcoT14I	CCWWGG	1 cut(s)	1809
EcoT22I	ATGCAT	1 cut(s)	1801
EcoT38I	GRGCYC	1 cut(s)	1202
ErhI	CCWWGG	1 cut(s)	1809
Esp3I	CGTCTC	1 cut(s)	46
FaeI	CATG	1 cut(s)	609
FaqI	GGGAC	2 cut(s)	246, 584
FatI	CATG	1 cut(s)	605
FauI	CCCGC	1 cut(s)	334
Fnu4HI	GCNGC	7 cut(s)	227, 273, 276, 279, 297, 1650, 1668
FokI	GGATG	3 cut(s)	15, 1025, 1516
FriOI	GRGCYC	1 cut(s)	1202
Fsp4HI	GCNGC	7 cut(s)	227, 273, 276, 279, 297, 1650, 1668
FspBI	CTAG	7 cut(s)	236, 405, 477, 539, 756, 960, 1587
GlaI	GCGC	1 cut(s)	225
GluI	GCNGC	7 cut(s)	227, 273, 276, 279, 297, 1650, 1668
GsaI	CCCAGC	1 cut(s)	233
GsuI	CTGGAG	3 cut(s)	143, 547, 1051
HaeIII	GGCC	6 cut(s)	140, 275, 296, 1438, 1814, 1819
HapII	CCGG	5 cut(s)	137, 353, 388, 941, 1816
HgaI	GACGC	1 cut(s)	1557
HhaI	GCGC	1 cut(s)	226
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	1 cut(s)	609
Hin6I	GCGC	1 cut(s)	224
HinP1I	GCGC	1 cut(s)	224
HincII	GTYRAC	4 cut(s)	465, 1513, 1657, 1722
HindII	GTYRAC	4 cut(s)	465, 1513, 1657, 1722
HindIII	AAGCTT	1 cut(s)	1706
HinfI	GANTC	6 cut(s)	173, 776, 832, 1400, 1424, 1629
HpaI	GTTAAC	1 cut(s)	1657
HpaII	CCGG	5 cut(s)	137, 353, 388, 941, 1816
HphI	GGTGA	2 cut(s)	604, 1454
Hpy166II	GTNNAC	8 cut(s)	13, 465, 900, 1283, 1355, 1513, 1657, 1722
Hpy188III	TCNNGA	6 cut(s)	382, 477, 526, 581, 701, 941
Hpy8I	GTNNAC	8 cut(s)	13, 465, 900, 1283, 1355, 1513, 1657, 1722
Hpy99I	CGWCG	3 cut(s)	287, 305, 1573
HpyAV	CCTTC	6 cut(s)	55, 568, 746, 753, 1019, 1678
HpyCH4III	ACNGT	4 cut(s)	374, 766, 866, 1510
HpyCH4IV	ACGT	3 cut(s)	206, 1451, 1521
HpyCH4V	TGCA	8 cut(s)	605, 666, 911, 1166, 1235, 1256, 1355, 1799
HpyF10VI	GCNNNNNNNGC	5 cut(s)	195, 269, 278, 1262, 1805
HpyF3I	CTNAG	3 cut(s)	617, 781, 1640
HpySE526I	ACGT	3 cut(s)	206, 1451, 1521
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	1 cut(s)	609
HspAI	GCGC	1 cut(s)	224
Kpn2I	TCCGGA	1 cut(s)	940
KspAI	GTTAAC	1 cut(s)	1657
Kzo9I	GATC	2 cut(s)	577, 1120
LguI	GCTCTTC	3 cut(s)	118, 179, 681
LmnI	GCTCC	4 cut(s)	139, 242, 446, 528
Lsp1109I	GCAGC	2 cut(s)	1636, 1654
LweI	GCATC	5 cut(s)	675, 985, 1363, 1786, 1808
MabI	ACCWGGT	1 cut(s)	1729
MaeI	CTAG	7 cut(s)	236, 405, 477, 539, 756, 960, 1587
MaeII	ACGT	3 cut(s)	206, 1451, 1521
MaeIII	GTNAC	2 cut(s)	356, 610
MalI	GATC	2 cut(s)	579, 1122
MboI	GATC	2 cut(s)	577, 1120
MflI	RGATCY	2 cut(s)	577, 1120
MhlI	GDGCHC	7 cut(s)	309, 327, 651, 1202, 1267, 1357, 1751
MlsI	TGGCCA	1 cut(s)	1438
MluNI	TGGCCA	1 cut(s)	1438
MlyI	GAGTC	2 cut(s)	182, 841
MmeI	TCCRAC	6 cut(s)	220, 387, 1066, 1365, 1434, 1657
Mox20I	TGGCCA	1 cut(s)	1438
Mph1103I	ATGCAT	1 cut(s)	1801
MroI	TCCGGA	1 cut(s)	940
MroXI	GAANNNNTTC	2 cut(s)	846, 1708
MscI	TGGCCA	1 cut(s)	1438
MseI	TTAA	6 cut(s)	414, 870, 1008, 1211, 1410, 1656
MslI	CAYNNNNRTG	1 cut(s)	1299
Msp20I	TGGCCA	1 cut(s)	1438
MspCI	CTTAAG	1 cut(s)	1007
MspI	CCGG	5 cut(s)	137, 353, 388, 941, 1816
MspR9I	CCNGG	9 cut(s)	161, 353, 354, 388, 555, 1440, 1716, 1731, 1816
MvaI	CCWGG	5 cut(s)	161, 555, 1440, 1716, 1731
MvnI	CGCG	1 cut(s)	226
MwoI	GCNNNNNNNGC	5 cut(s)	195, 269, 278, 1262, 1805
NciI	CCSGG	4 cut(s)	353, 354, 388, 1816
NdeII	GATC	2 cut(s)	577, 1120
NlaIII	CATG	1 cut(s)	609
NlaIV	GGNNCC	4 cut(s)	135, 244, 600, 1728
NmuCI	GTSAC	1 cut(s)	610
NotI	GCGGCCGC	1 cut(s)	273
NsiI	ATGCAT	1 cut(s)	1801
NspI	RCATGY	1 cut(s)	609
NspV	TTCGAA	1 cut(s)	748
PciSI	GCTCTTC	3 cut(s)	118, 179, 681
PdmI	GAANNNNTTC	2 cut(s)	846, 1708
PfeI	GAWTC	4 cut(s)	776, 1400, 1424, 1629
Pfl23II	CGTACG	1 cut(s)	207
PflFI	GACNNNGTC	1 cut(s)	57
PkrI	GCNGC	7 cut(s)	228, 274, 277, 280, 298, 1651, 1669
PleI	GAGTC	2 cut(s)	181, 840
PpsI	GAGTC	2 cut(s)	181, 840
PpuMI	RGGWCCY	2 cut(s)	154, 598
Psp1406I	AACGTT	1 cut(s)	1451
Psp5II	RGGWCCY	2 cut(s)	154, 598
Psp6I	CCWGG	5 cut(s)	159, 553, 1438, 1714, 1729
PspFI	CCCAGC	1 cut(s)	229
PspGI	CCWGG	5 cut(s)	159, 553, 1438, 1714, 1729
PspLI	CGTACG	1 cut(s)	207
PspN4I	GGNNCC	4 cut(s)	135, 244, 600, 1728
PspPI	GGNCC	5 cut(s)	154, 598, 938, 1741, 1813
PspPPI	RGGWCCY	2 cut(s)	154, 598
PstNI	CAGNNNCTG	2 cut(s)	63, 265
PsuI	RGATCY	2 cut(s)	577, 1120
PsyI	GACNNNGTC	1 cut(s)	57
RsaI	GTAC	6 cut(s)	209, 371, 376, 1112, 1310, 1488
RsaNI	GTAC	6 cut(s)	208, 370, 375, 1111, 1309, 1487
RseI	CAYNNNNRTG	1 cut(s)	1299
SapI	GCTCTTC	3 cut(s)	118, 179, 681
SaqAI	TTAA	6 cut(s)	414, 870, 1008, 1211, 1410, 1656
SatI	GCNGC	7 cut(s)	227, 273, 276, 279, 297, 1650, 1668
Sau3AI	GATC	2 cut(s)	577, 1120
Sau96I	GGNCC	5 cut(s)	154, 598, 938, 1741, 1813
ScaI	AGTACT	1 cut(s)	1310
SchI	GAGTC	2 cut(s)	182, 841
ScrFI	CCNGG	9 cut(s)	161, 353, 354, 388, 555, 1440, 1716, 1731, 1816
SduI	GDGCHC	7 cut(s)	309, 327, 651, 1202, 1267, 1357, 1751
SexAI	ACCWGGT	1 cut(s)	1729
SfaNI	GCATC	5 cut(s)	675, 985, 1363, 1786, 1808
SfuI	TTCGAA	1 cut(s)	748
SinI	GGWCC	4 cut(s)	154, 598, 938, 1741
SmaI	CCCGGG	1 cut(s)	354
SmiMI	CAYNNNNRTG	1 cut(s)	1299
SmlI	CTYRAG	4 cut(s)	581, 1007, 1312, 1736
SmoI	CTYRAG	4 cut(s)	581, 1007, 1312, 1736
SpeI	ACTAGT	3 cut(s)	235, 538, 959
SsiI	CCGC	6 cut(s)	226, 272, 276, 279, 297, 327
SspMI	CTAG	7 cut(s)	236, 405, 477, 539, 756, 960, 1587
StyD4I	CCNGG	9 cut(s)	159, 351, 352, 386, 553, 1438, 1714, 1729, 1814
StyI	CCWWGG	1 cut(s)	1809
TaaI	ACNGT	4 cut(s)	374, 766, 866, 1510
TaiI	ACGT	3 cut(s)	209, 1454, 1524
TaqI	TCGA	5 cut(s)	383, 748, 840, 1682, 1825
TatI	WGTACW	3 cut(s)	374, 1110, 1308
TauI	GCSGC	5 cut(s)	229, 275, 278, 281, 299
TfiI	GAWTC	4 cut(s)	776, 1400, 1424, 1629
Tru1I	TTAA	6 cut(s)	414, 870, 1008, 1211, 1410, 1656
Tru9I	TTAA	6 cut(s)	414, 870, 1008, 1211, 1410, 1656
TscAI	CASTG	4 cut(s)	454, 1267, 1370, 1751
TseFI	GTSAC	1 cut(s)	610
TseI	GCWGC	2 cut(s)	1649, 1667
Tsp45I	GTSAC	1 cut(s)	610
TspDTI	ATGAA	6 cut(s)	587, 612, 728, 839, 1131, 1569
TspGWI	ACGGA	2 cut(s)	300, 1739
TspMI	CCCGGG	1 cut(s)	352
TspRI	CASTG	4 cut(s)	454, 1267, 1370, 1751
Tth111I	GACNNNGTC	1 cut(s)	57
Vha464I	CTTAAG	1 cut(s)	1007
VneI	GTGCAC	1 cut(s)	1353
VpaK11BI	GGWCC	4 cut(s)	154, 598, 938, 1741
XapI	RAATTY	3 cut(s)	944, 1019, 1242
XbaI	TCTAGA	1 cut(s)	476
XceI	RCATGY	1 cut(s)	609
XmaI	CCCGGG	1 cut(s)	352
XmnI	GAANNNNTTC	2 cut(s)	846, 1708
XspI	CTAG	7 cut(s)	236, 405, 477, 539, 756, 960, 1587
ZrmI	AGTACT	1 cut(s)	1310
Zsp2I	ATGCAT	1 cut(s)	1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.