Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0010401

Physical Location & Seq

Genomic Coordinates Forward (+)

6404638 .. 6408836

Gene Structure 4199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG075600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGCGTCCGTCCACTCTCTCTTCCTCCATCCTCCTCTCGTCTCCTTCCGACGACCTAGTTGCAGCTCTCTCTTCTCCAAACCCCGAAATCCCCGTTTTACCCTCGCCTGCTCCTCTTCTTCTTCTCGGAAATCGGCTCCGGCCACCGAGCAGGAGGTCCTCGAGGCGATTTCCGAGTCCTCCGAGAAGAGCCTGCCGTGCGTGAGAACGTACGAGAACGAATTGGCGCGGCTGGGACTAGTCGGAGCCGTGGATTTTCAGCAGGCTCTGACGGCGGCCGCCGCCGACGGAGGAGAGGCCGCCGACGAGCACATTAGGGAGGGCGTGCCCGCTATGGTTGTGGAGACTTTGTTCCCGGGTAACTCCGACCCGTACAGTACAATCTCGACCCGGCTGTTTCTTCCTGCTAGAAAAGTTAAAGAAAAAGCTGGTAAATTGAGAAGCTCCATCACTGAAGATATGCTGTCAACCACTACTTCTAGAAACATACTTTCTATGACATTTAGACAAGTAGTGTTAGAACTACTCTGGAGCTTTCAACTAGTTGTTTTCAGACCTGGAACTCAAAGGAATATGAAGGATCTTGAGAACCCCAGAGAGGTCCCTGCATGTGTCACCCTTAGTTCATCAGACGAACGGATTTTATCTGTGCTCGCAGAAGTTGTCTGCATCTCTGCTCTTCAAAATACAGAAAAACAATTTCTTGAAGATTACACGGGCAAAACACCGAGTAAATTCCTTCATTGGTTTCGAAAGCCAGGAAGGACTGTATCAAAAGATTCCTCAGTTGTCATATACAAATTATTTGAAGATGAGATAGTTGAAAATGCCAAGAGTCTGCTCGAACATTTTCATTCCACGAAGAACAGTTTTAAGTCTGTAAAAGCAAAATCAAAGTGGTGGACACCATCTGCACTCTCTAAACTGGAAAAGATTGGTGGTCCAGAATTTAGTTCTTGGACTAGTGAGTATGTTCCAGCTTACAAGCTACAAATTGATGCTAATCGGCTTAAGGATGTGAAATTTGAAGGCTGGAGAAAATGTGGAGAAAATAGTTGGGAAGTTCTTTTGACACACTCCCAGATGGTTGGATTGGCTGATATAATAGATATGTACTATGAAGATCTTTACACCCTGCCTGATAAAGAACTATCTTGTGGTGTTATTGCAAGTTCCACCAACTTATCTAATAAAAAGACGGGCTCGTTCTTATTAAAATTGCTATCTGTCTCCCTTGCAAGTGGAATTCTTCTCGTTGCAATCAGTGCTCTTGGTCAATTTGGTTTACCTTATCTACACAAAGGTGGCAAGTACTTGAGAGAACACAGGTCTATTCCATCGTCTGAAGTTGATAGTGCACTAAATCAGTGTTCAGATGCCATGAAGTTGGAAGCATTTTGCGAATCAGTTGTTAAAAAGATAAAAGATTCTCTGGGTTGGCCAGGTGAGATAACGTTGGAAACAAATGTGGGTGCTTGGACTGGCAAAGTACCAGATTATTTGAGGATGGCTGTTGGCGAAGACGTGCCAATCTCTCCCCCTTTAGATAAAATTGATGAAGACTTGAAAGCGTCGGCACAAGATATTGCTAGTTATCAGGTGGTTCTGTCAGCAGATGGAAAGATAGTGGGATTCCAACCTCTAAGCAGGGCTGCTGTTAACCATTGGGCTGCCAATCCCTTGTCGAAGGAGTTATATGGAGGAAGAAAGCTTTCTCCTGGGTTGACGGAACCTGGTCTCAAGGTCCAGTGCCCAGATGAGGTCGCTGTCATAGAGTTGTTGATGTCAGTAAAACCAGATGCATCATTTGCGTTGGCCCGGCCAGTTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

610

Amino Acids

67.09

Weight (kDa)

6.82

Isoelectric Point (pI)

35.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28530 AT1G28530
fragaria_vesca	FvH4_3g08370
malus_domestica	MD05G1308100.v1.1
prunus_persica	Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1
pyrus_communis	pycom05g28480
rosa_chinensis	RchiOBHm_Chr5g0009531
rosa_laevigata	RLG00000031669
rosa_multiflora	Rmu_sc0002711.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066600 Rroxscaffold_1G00067300
rosa_rugosa	Rorug04G0444100 Rorug04G0444200
rosa_samantha	Rh5AG075600 Rh5BG070800 Rh5CG083500 Rh5DG071200
rosa_wichuraiana	Rw5G006970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	161
AccII	CGCG	1 cut(s)	229
AciI	CCGC	6 cut(s)	229, 275, 279, 282, 300, 330
AclI	AACGTT	1 cut(s)	1454
AclWI	GGATC	1 cut(s)	588
AcoI	YGGCCR	4 cut(s)	141, 276, 1439, 1820
AcsI	RAATTY	4 cut(s)	734, 947, 1022, 1245
AcuI	CTGAAG	2 cut(s)	474, 1365
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	6 cut(s)	212, 374, 379, 1115, 1313, 1491
AfiI	CCNNNNNNNGG	2 cut(s)	598, 1759
AflII	CTTAAG	1 cut(s)	1010
AgsI	TTSAA	7 cut(s)	539, 683, 707, 809, 824, 1028, 1567
AhlI	ACTAGT	3 cut(s)	238, 541, 962
AjiI	CACGTC	1 cut(s)	1525
AjnI	CCWGG	5 cut(s)	556, 757, 1441, 1717, 1732
AleI	CACNNNNGTG	1 cut(s)	1302
AloI	GAACNNNNNNTCC	2 cut(s)	335, 367
AluBI	AGCT	7 cut(s)	66, 428, 444, 534, 980, 988, 1711
AluI	AGCT	7 cut(s)	66, 428, 444, 534, 980, 988, 1711
Alw21I	GWGCWC	4 cut(s)	312, 654, 1270, 1360
Alw26I	GTCTC	4 cut(s)	46, 338, 1234, 1742
Alw44I	GTGCAC	1 cut(s)	1356
AlwI	GGATC	1 cut(s)	588
AlwNI	CAGNNNCTG	1 cut(s)	268
Ama87I	CYCGRG	2 cut(s)	161, 355
AoxI	GGCC	6 cut(s)	141, 276, 297, 1439, 1815, 1820
ApaLI	GTGCAC	1 cut(s)	1356
ApeKI	GCWGC	3 cut(s)	63, 1652, 1670
ApoI	RAATTY	4 cut(s)	734, 947, 1022, 1245
Asp700I	GAANNNNTTC	2 cut(s)	849, 1711
AspLEI	GCGC	1 cut(s)	229
AspS9I	GGNCC	5 cut(s)	157, 601, 941, 1744, 1816
AsuC2I	CCSGG	4 cut(s)	356, 357, 391, 1819
AsuHPI	GGTGA	2 cut(s)	607, 1457
AsuII	TTCGAA	1 cut(s)	751
AvaI	CYCGRG	2 cut(s)	161, 355
AvaII	GGWCC	4 cut(s)	157, 601, 941, 1744
BaeGI	GKGCMC	3 cut(s)	330, 1360, 1754
BalI	TGGCCA	1 cut(s)	1441
BanII	GRGCYC	1 cut(s)	1205
BbsI	GAAGAC	2 cut(s)	1527, 1566
Bbv12I	GWGCWC	4 cut(s)	312, 654, 1270, 1360
BbvI	GCAGC	3 cut(s)	75, 1639, 1657
BccI	CCATC	7 cut(s)	36, 455, 916, 1078, 1345, 1501, 1610
BceAI	ACGGC	3 cut(s)	181, 233, 288
BcgI	CGANNNNNNTGC	2 cut(s)	42, 76
BciT130I	CCWGG	5 cut(s)	558, 759, 1443, 1719, 1734
BcnI	CCSGG	4 cut(s)	356, 357, 391, 1819
BcoDI	GTCTC	4 cut(s)	46, 338, 1234, 1742
BcuI	ACTAGT	3 cut(s)	238, 541, 962
BfaI	CTAG	7 cut(s)	57, 239, 408, 480, 542, 963, 1590
BfrI	CTTAAG	1 cut(s)	1010
BglII	AGATCT	1 cut(s)	1123
BisI	GCNGC	8 cut(s)	64, 230, 276, 279, 282, 300, 1653, 1671
BlsI	GCNGC	8 cut(s)	65, 231, 277, 280, 283, 301, 1654, 1672
BmcAI	AGTACT	1 cut(s)	1313
Bme1390I	CCNGG	9 cut(s)	356, 357, 391, 558, 759, 1443, 1719, 1734, 1819
Bme18I	GGWCC	4 cut(s)	157, 601, 941, 1744
BmeT110I	CYCGRG	2 cut(s)	161, 355
BmgBI	CACGTC	1 cut(s)	1525
BmgT120I	GGNCC	5 cut(s)	157, 601, 941, 1744, 1816
BmiI	GGNNCC	4 cut(s)	138, 247, 603, 1731
BmrFI	CCNGG	9 cut(s)	356, 357, 391, 558, 759, 1443, 1719, 1734, 1819
BmsI	GCATC	5 cut(s)	678, 988, 1366, 1789, 1811
BpiI	GAAGAC	2 cut(s)	1527, 1566
BpmI	CTGGAG	2 cut(s)	550, 1054
Bpu14I	TTCGAA	1 cut(s)	751
BpuEI	CTTGAG	3 cut(s)	605, 1336, 1724
BpuMI	CCSGG	4 cut(s)	356, 357, 391, 1819
BsaBI	GATNNNNATC	1 cut(s)	1002
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1742
BsaJI	CCNNGG	3 cut(s)	249, 355, 1718
BsaXI	ACNNNNNCTCC	4 cut(s)	335, 365, 1027, 1057
Bsc4I	CCNNNNNNNGG	2 cut(s)	598, 1759
Bse1I	ACTGG	4 cut(s)	930, 1486, 1747, 1823
Bse8I	GATNNNNATC	1 cut(s)	1002
BseBI	CCWGG	5 cut(s)	558, 759, 1443, 1719, 1734
BseDI	CCNNGG	3 cut(s)	249, 355, 1718
BseGI	GGATG	3 cut(s)	28, 1021, 1512
BseJI	GATNNNNATC	1 cut(s)	1002
BseLI	CCNNNNNNNGG	2 cut(s)	598, 1759
BseMII	CTCAG	1 cut(s)	798
BseNI	ACTGG	4 cut(s)	930, 1486, 1747, 1823
BseRI	GAGGAG	3 cut(s)	24, 103, 306
BseSI	GKGCMC	3 cut(s)	330, 1360, 1754
BseX3I	CGGCCG	1 cut(s)	276
BseXI	GCAGC	3 cut(s)	75, 1639, 1657
BseYI	CCCAGC	1 cut(s)	232
BsgI	GTGCAG	1 cut(s)	897
Bsh1236I	CGCG	1 cut(s)	229
Bsh1285I	CGRYCG	1 cut(s)	279
BshFI	GGCC	6 cut(s)	143, 278, 299, 1441, 1817, 1822
BsiEI	CGRYCG	1 cut(s)	279
BsiHKAI	GWGCWC	4 cut(s)	312, 654, 1270, 1360
BsiHKCI	CYCGRG	2 cut(s)	161, 355
BsiSI	CCGG	4 cut(s)	140, 356, 391, 1819
BsiWI	CGTACG	1 cut(s)	210
BslFI	GGGAC	2 cut(s)	249, 587
BslI	CCNNNNNNNGG	2 cut(s)	598, 1759
BsmAI	GTCTC	4 cut(s)	46, 338, 1234, 1742
BsmBI	CGTCTC	1 cut(s)	46
BsmFI	GGGAC	2 cut(s)	249, 587
BsnI	GGCC	6 cut(s)	143, 278, 299, 1441, 1817, 1822
Bso31I	GGTCTC	1 cut(s)	1742
BsoBI	CYCGRG	2 cut(s)	161, 355
Bsp119I	TTCGAA	1 cut(s)	751
Bsp1286I	GDGCHC	7 cut(s)	312, 330, 654, 1205, 1270, 1360, 1754
Bsp143I	GATC	2 cut(s)	580, 1123
BspACI	CCGC	6 cut(s)	229, 275, 279, 282, 300, 330
BspANI	GGCC	6 cut(s)	143, 278, 299, 1441, 1817, 1822
BspCNI	CTCAG	1 cut(s)	797
BspFNI	CGCG	1 cut(s)	229
BspLI	GGNNCC	4 cut(s)	138, 247, 603, 1731
BspPI	GGATC	1 cut(s)	588
BspQI	GCTCTTC	2 cut(s)	182, 684
BspT104I	TTCGAA	1 cut(s)	751
BspTI	CTTAAG	1 cut(s)	1010
BspTNI	GGTCTC	1 cut(s)	1742
BsrI	ACTGG	4 cut(s)	930, 1486, 1747, 1823
BssECI	CCNNGG	3 cut(s)	249, 355, 1718
BssMI	GATC	2 cut(s)	580, 1123
BssNI	GRCGYC	1 cut(s)	5
Bst2UI	CCWGG	5 cut(s)	558, 759, 1443, 1719, 1734
Bst4CI	ACNGT	3 cut(s)	377, 769, 869
Bst6I	CTCTTC	5 cut(s)	26, 77, 121, 182, 684
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	1 cut(s)	1010
BstAPI	GCANNNNNTGC	2 cut(s)	1265, 1808
BstBI	TTCGAA	1 cut(s)	751
BstC8I	GCNNGC	6 cut(s)	109, 194, 264, 326, 330, 654
BstDEI	CTNAG	3 cut(s)	620, 784, 1643
BstDSI	CCRYGG	1 cut(s)	249
BstF5I	GGATG	3 cut(s)	28, 1021, 1512
BstFNI	CGCG	1 cut(s)	229
BstHHI	GCGC	1 cut(s)	229
BstKTI	GATC	2 cut(s)	583, 1126
BstMAI	GTCTC	4 cut(s)	46, 338, 1234, 1742
BstMBI	GATC	2 cut(s)	580, 1123
BstMCI	CGRYCG	1 cut(s)	279
BstMWI	GCNNNNNNNGC	5 cut(s)	198, 272, 281, 1265, 1808
BstNI	CCWGG	5 cut(s)	558, 759, 1443, 1719, 1734
BstNSI	RCATGY	1 cut(s)	612
BstSCI	CCNGG	9 cut(s)	354, 355, 389, 556, 757, 1441, 1717, 1732, 1817
BstSLI	GKGCMC	3 cut(s)	330, 1360, 1754
BstUI	CGCG	1 cut(s)	229
BstV1I	GCAGC	3 cut(s)	75, 1639, 1657
BstV2I	GAAGAC	2 cut(s)	1527, 1566
BstX2I	RGATCY	2 cut(s)	580, 1123
BstXI	CCANNNNNNTGG	2 cut(s)	1088, 1387
BstYI	RGATCY	2 cut(s)	580, 1123
BstZI	CGGCCG	1 cut(s)	276
BsuRI	GGCC	6 cut(s)	143, 278, 299, 1441, 1817, 1822
BtgI	CCRYGG	1 cut(s)	249
BtrI	CACGTC	1 cut(s)	1525
BtsCI	GGATG	3 cut(s)	28, 1021, 1512
BtsIMutI	CAGTG	4 cut(s)	450, 1270, 1373, 1754
Cac8I	GCNNGC	6 cut(s)	109, 194, 264, 326, 330, 654
CaiI	CAGNNNCTG	1 cut(s)	268
CciNI	GCGGCCGC	1 cut(s)	276
CfoI	GCGC	1 cut(s)	229
Cfr13I	GGNCC	5 cut(s)	157, 601, 941, 1744, 1816
Cfr9I	CCCGGG	1 cut(s)	355
CseI	GACGC	1 cut(s)	1560
CsiI	ACCWGGT	1 cut(s)	1732
Csp6I	GTAC	6 cut(s)	211, 373, 378, 1114, 1312, 1490
CviAII	CATG	2 cut(s)	609, 1381
CviQI	GTAC	6 cut(s)	211, 373, 378, 1114, 1312, 1490
DdeI	CTNAG	3 cut(s)	620, 784, 1643
DpnI	GATC	2 cut(s)	582, 1125
DpnII	GATC	2 cut(s)	580, 1123
EaeI	YGGCCR	4 cut(s)	141, 276, 1439, 1820
EagI	CGGCCG	1 cut(s)	276
Eam1104I	CTCTTC	5 cut(s)	26, 77, 121, 182, 684
EarI	CTCTTC	5 cut(s)	26, 77, 121, 182, 684
EclXI	CGGCCG	1 cut(s)	276
Eco24I	GRGCYC	1 cut(s)	1205
Eco31I	GGTCTC	1 cut(s)	1742
Eco47I	GGWCC	4 cut(s)	157, 601, 941, 1744
Eco52I	CGGCCG	1 cut(s)	276
Eco57I	CTGAAG	2 cut(s)	474, 1365
Eco88I	CYCGRG	2 cut(s)	161, 355
EcoO109I	RGGNCCY	2 cut(s)	157, 601
EcoRI	GAATTC	1 cut(s)	1245
EcoRII	CCWGG	5 cut(s)	556, 757, 1441, 1717, 1732
EcoT22I	ATGCAT	1 cut(s)	1804
EcoT38I	GRGCYC	1 cut(s)	1205
Esp3I	CGTCTC	1 cut(s)	46
FaeI	CATG	2 cut(s)	612, 1384
FaqI	GGGAC	2 cut(s)	249, 587
FatI	CATG	2 cut(s)	608, 1380
FauI	CCCGC	1 cut(s)	337
Fnu4HI	GCNGC	8 cut(s)	64, 230, 276, 279, 282, 300, 1653, 1671
FokI	GGATG	3 cut(s)	15, 1028, 1519
FriOI	GRGCYC	1 cut(s)	1205
Fsp4HI	GCNGC	8 cut(s)	64, 230, 276, 279, 282, 300, 1653, 1671
FspBI	CTAG	7 cut(s)	57, 239, 408, 480, 542, 963, 1590
GlaI	GCGC	1 cut(s)	228
GluI	GCNGC	8 cut(s)	64, 230, 276, 279, 282, 300, 1653, 1671
GsaI	CCCAGC	1 cut(s)	236
GsuI	CTGGAG	2 cut(s)	550, 1054
HaeIII	GGCC	6 cut(s)	143, 278, 299, 1441, 1817, 1822
HapII	CCGG	4 cut(s)	140, 356, 391, 1819
HgaI	GACGC	1 cut(s)	1560
HhaI	GCGC	1 cut(s)	229
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	2 cut(s)	612, 1384
Hin6I	GCGC	1 cut(s)	227
HinP1I	GCGC	1 cut(s)	227
HincII	GTYRAC	3 cut(s)	468, 1660, 1725
HindII	GTYRAC	3 cut(s)	468, 1660, 1725
HindIII	AAGCTT	1 cut(s)	1709
HinfI	GANTC	6 cut(s)	176, 779, 835, 1403, 1427, 1632
HpaI	GTTAAC	1 cut(s)	1660
HpaII	CCGG	4 cut(s)	140, 356, 391, 1819
HphI	GGTGA	2 cut(s)	607, 1457
Hpy166II	GTNNAC	7 cut(s)	13, 468, 903, 1286, 1358, 1660, 1725
Hpy188III	TCNNGA	6 cut(s)	385, 480, 529, 584, 704, 944
Hpy8I	GTNNAC	7 cut(s)	13, 468, 903, 1286, 1358, 1660, 1725
Hpy99I	CGWCG	4 cut(s)	54, 290, 308, 1576
HpyAV	CCTTC	6 cut(s)	55, 571, 749, 756, 1022, 1681
HpyCH4III	ACNGT	3 cut(s)	377, 769, 869
HpyCH4IV	ACGT	3 cut(s)	209, 1454, 1524
HpyCH4V	TGCA	9 cut(s)	63, 608, 669, 914, 1169, 1238, 1259, 1358, 1802
HpyF10VI	GCNNNNNNNGC	5 cut(s)	198, 272, 281, 1265, 1808
HpyF3I	CTNAG	3 cut(s)	620, 784, 1643
HpySE526I	ACGT	3 cut(s)	209, 1454, 1524
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	2 cut(s)	612, 1384
HspAI	GCGC	1 cut(s)	227
KspAI	GTTAAC	1 cut(s)	1660
Kzo9I	GATC	2 cut(s)	580, 1123
LguI	GCTCTTC	2 cut(s)	182, 684
LmnI	GCTCC	5 cut(s)	116, 142, 245, 449, 531
Lsp1109I	GCAGC	3 cut(s)	75, 1639, 1657
LweI	GCATC	5 cut(s)	678, 988, 1366, 1789, 1811
MabI	ACCWGGT	1 cut(s)	1732
MaeI	CTAG	7 cut(s)	57, 239, 408, 480, 542, 963, 1590
MaeII	ACGT	3 cut(s)	209, 1454, 1524
MaeIII	GTNAC	2 cut(s)	359, 613
MalI	GATC	2 cut(s)	582, 1125
MboI	GATC	2 cut(s)	580, 1123
MboII	GAAGA	6 cut(s)	13, 64, 108, 111, 114, 199
MflI	RGATCY	2 cut(s)	580, 1123
MhlI	GDGCHC	7 cut(s)	312, 330, 654, 1205, 1270, 1360, 1754
MlsI	TGGCCA	1 cut(s)	1441
MluNI	TGGCCA	1 cut(s)	1441
MlyI	GAGTC	2 cut(s)	185, 844
MmeI	TCCRAC	8 cut(s)	73, 223, 390, 1069, 1368, 1437, 1660, 1807
Mox20I	TGGCCA	1 cut(s)	1441
Mph1103I	ATGCAT	1 cut(s)	1804
MroXI	GAANNNNTTC	2 cut(s)	849, 1711
MscI	TGGCCA	1 cut(s)	1441
MseI	TTAA	6 cut(s)	417, 873, 1011, 1214, 1413, 1659
MslI	CAYNNNNRTG	1 cut(s)	1302
Msp20I	TGGCCA	1 cut(s)	1441
MspCI	CTTAAG	1 cut(s)	1010
MspI	CCGG	4 cut(s)	140, 356, 391, 1819
MspR9I	CCNGG	9 cut(s)	356, 357, 391, 558, 759, 1443, 1719, 1734, 1819
MvaI	CCWGG	5 cut(s)	558, 759, 1443, 1719, 1734
MvnI	CGCG	1 cut(s)	229
MwoI	GCNNNNNNNGC	5 cut(s)	198, 272, 281, 1265, 1808
NciI	CCSGG	4 cut(s)	356, 357, 391, 1819
NdeII	GATC	2 cut(s)	580, 1123
NlaIII	CATG	2 cut(s)	612, 1384
NlaIV	GGNNCC	4 cut(s)	138, 247, 603, 1731
NmuCI	GTSAC	1 cut(s)	613
NotI	GCGGCCGC	1 cut(s)	276
NsiI	ATGCAT	1 cut(s)	1804
NspI	RCATGY	1 cut(s)	612
NspV	TTCGAA	1 cut(s)	751
OliI	CACNNNNGTG	1 cut(s)	1302
PaeR7I	CTCGAG	1 cut(s)	161
PciSI	GCTCTTC	2 cut(s)	182, 684
PdmI	GAANNNNTTC	2 cut(s)	849, 1711
PfeI	GAWTC	4 cut(s)	779, 1403, 1427, 1632
Pfl23II	CGTACG	1 cut(s)	210
PkrI	GCNGC	8 cut(s)	65, 231, 277, 280, 283, 301, 1654, 1672
PleI	GAGTC	2 cut(s)	184, 843
PpsI	GAGTC	2 cut(s)	184, 843
PpuMI	RGGWCCY	2 cut(s)	157, 601
Psp1406I	AACGTT	1 cut(s)	1454
Psp5II	RGGWCCY	2 cut(s)	157, 601
Psp6I	CCWGG	5 cut(s)	556, 757, 1441, 1717, 1732
PspFI	CCCAGC	1 cut(s)	232
PspGI	CCWGG	5 cut(s)	556, 757, 1441, 1717, 1732
PspLI	CGTACG	1 cut(s)	210
PspN4I	GGNNCC	4 cut(s)	138, 247, 603, 1731
PspPI	GGNCC	5 cut(s)	157, 601, 941, 1744, 1816
PspPPI	RGGWCCY	2 cut(s)	157, 601
PspXI	VCTCGAGB	1 cut(s)	161
PstNI	CAGNNNCTG	1 cut(s)	268
PsuI	RGATCY	2 cut(s)	580, 1123
RsaI	GTAC	6 cut(s)	212, 374, 379, 1115, 1313, 1491
RsaNI	GTAC	6 cut(s)	211, 373, 378, 1114, 1312, 1490
RseI	CAYNNNNRTG	1 cut(s)	1302
SapI	GCTCTTC	2 cut(s)	182, 684
SaqAI	TTAA	6 cut(s)	417, 873, 1011, 1214, 1413, 1659
SatI	GCNGC	8 cut(s)	64, 230, 276, 279, 282, 300, 1653, 1671
Sau3AI	GATC	2 cut(s)	580, 1123
Sau96I	GGNCC	5 cut(s)	157, 601, 941, 1744, 1816
ScaI	AGTACT	1 cut(s)	1313
SchI	GAGTC	2 cut(s)	185, 844
ScrFI	CCNGG	9 cut(s)	356, 357, 391, 558, 759, 1443, 1719, 1734, 1819
SduI	GDGCHC	7 cut(s)	312, 330, 654, 1205, 1270, 1360, 1754
SexAI	ACCWGGT	1 cut(s)	1732
SfaNI	GCATC	5 cut(s)	678, 988, 1366, 1789, 1811
Sfr274I	CTCGAG	1 cut(s)	161
SfuI	TTCGAA	1 cut(s)	751
SinI	GGWCC	4 cut(s)	157, 601, 941, 1744
SlaI	CTCGAG	1 cut(s)	161
SmaI	CCCGGG	1 cut(s)	357
SmiMI	CAYNNNNRTG	1 cut(s)	1302
SmlI	CTYRAG	5 cut(s)	161, 584, 1010, 1315, 1739
SmoI	CTYRAG	5 cut(s)	161, 584, 1010, 1315, 1739
SpeI	ACTAGT	3 cut(s)	238, 541, 962
SsiI	CCGC	6 cut(s)	229, 275, 279, 282, 300, 330
SspMI	CTAG	7 cut(s)	57, 239, 408, 480, 542, 963, 1590
StyD4I	CCNGG	9 cut(s)	354, 355, 389, 556, 757, 1441, 1717, 1732, 1817
TaaI	ACNGT	3 cut(s)	377, 769, 869
TaiI	ACGT	3 cut(s)	212, 1457, 1527
TaqI	TCGA	5 cut(s)	162, 386, 751, 843, 1685
TatI	WGTACW	3 cut(s)	377, 1113, 1311
TauI	GCSGC	5 cut(s)	232, 278, 281, 284, 302
TfiI	GAWTC	4 cut(s)	779, 1403, 1427, 1632
Tru1I	TTAA	6 cut(s)	417, 873, 1011, 1214, 1413, 1659
Tru9I	TTAA	6 cut(s)	417, 873, 1011, 1214, 1413, 1659
TscAI	CASTG	4 cut(s)	457, 1270, 1373, 1754
TseFI	GTSAC	1 cut(s)	613
TseI	GCWGC	3 cut(s)	63, 1652, 1670
Tsp45I	GTSAC	1 cut(s)	613
TspDTI	ATGAA	7 cut(s)	590, 615, 731, 842, 1134, 1397, 1572
TspGWI	ACGGA	3 cut(s)	303, 652, 1742
TspMI	CCCGGG	1 cut(s)	355
TspRI	CASTG	4 cut(s)	457, 1270, 1373, 1754
Vha464I	CTTAAG	1 cut(s)	1010
VneI	GTGCAC	1 cut(s)	1356
VpaK11BI	GGWCC	4 cut(s)	157, 601, 941, 1744
XapI	RAATTY	4 cut(s)	734, 947, 1022, 1245
XbaI	TCTAGA	1 cut(s)	479
XceI	RCATGY	1 cut(s)	612
XhoI	CTCGAG	1 cut(s)	161
XmaI	CCCGGG	1 cut(s)	355
XmnI	GAANNNNTTC	2 cut(s)	849, 1711
XspI	CTAG	7 cut(s)	57, 239, 408, 480, 542, 963, 1590
ZrmI	AGTACT	1 cut(s)	1313
Zsp2I	ATGCAT	1 cut(s)	1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.