Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010401

Physical Location & Seq

Genomic Coordinates Reverse (-)

4897812 .. 4901920

Gene Structure 4109 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g08370.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGACGTCAGCCCACTCTCTCCTCCTCCATCCTCCTCTCGTCTCCTTCACACGGCCTTCTCGCTGCTCTCTCTTCTCTACGCCCCGGAATTCCCGTTTTACCCTCGCCTGCTGTTCTTCTCGGAAAACGGCGCCGGTGACGGAGCAAGAGGTCCTGCAGGCGATTTCTGAGTCGGCCGAGAAGAGCCTGCCGTGCGTGAGGACGTACGAGAATGAGTTGGCGCGGCTGGGAGTGGTCGGCGCCGTGGATTTTCAGCAGGCGCTAACGGCGGCCGCCGCGGACGGAGGAGAGGCCGCCGACGAGCACATTAGGGAGGGCGTGCCTGCTATGGTTGTGGAGACTTTGTTGCCGGGTAATTCCGACCCGTACAGCACAATCTCGACCCGGCTGTTTCTTCCTGCTAGAAAAGTTAAAGAAAAAGCTGGTAAACTGAGAAGCTCCATCACTCAAGATATGCTGTCAACCACAACTTCTAGAAACATACTTGCTATGACATTTAGACAAGTAGTGTTAGAACTGCTCTGGAACTTTCAACTAGTTGTTTTTAGACCTGGAACTCAAAGGAATATGAAGGATCTTGAAAACGCGAGAGAGGTCCCTGCATGTGTCACCCTTAGTTCATCAGATGAACGGATTTTATCTGTGCTCGCAGAAGTTGTATGCATCTCTGCTCTTCAAAACACAGAGAAACAATTTCTTGAAGATTACACAGGCAAAACACCGAGTGATTTACTTCATTCGTTTCGAAAGCCTAGACGGATTGTGTCAAAAGATTCCTCAGTTGTCATATACAAATTATTTGAAGATGAGATAGTTGAAAATGCCAAGAGCCTGCTCGAACATTTTAATTCCGCCAAGAACAGTTTTAAGTCTGTAAAAACAAAATCAAAGTGGTGGACACCATCTGCACTCTCTAAACTGGAAAAGATTGGCGGTCCAGAATTTAGTTGTTGGACTAGTGAGTATGTTCCAGCTTACAAGCTACAAATTGATGCTAATCGGCATAAGGATGTGAAATTTGAAGGCTGGAGAAAATGTGGAGAAACTAGCTGGGAAGTTCTTTTGACACACTCCCAGATGGTTGGATTGGCTGATATAATAGATATGTACTATGAGGATCTTTATACCCTGCCTGATAAGGAACTATCTTGTGGTGATATAGCAAGTTTCACCAACATATCTAATAAAAAGACGGGATCTTTCTTATTAAAACTGTTATCTGTCTCCCTTGCAAGTGGAATTCTTCTCGTTGCAATCAGTGCTCTTGGTCAATTTGGTTTACCTTATCTACATAAAGGTGGGAAGTACTTGGGAGAACGCAGATCTATTCCATCATCTGAAGTTGATAGTGCACTAAATCAGTGTTCAGATACTGTGAAGTTGGAAGCATTTTGCGAATCTGTTGTTAAAAAGGTAAAAGATTCTCTGGGTTGGCCAGGTGAGATAACATTGGAAAGAAATGTGGGTGCTTGGACCGGCAAAGTACCAGATTATTTGAGGATGGCTGTTGAAGATCATTTAAACAACGAAGACCTGTCAACTATTTCTGTTCCTTTAGATAAAATTGATGAAGACTTGAAAGCATCGGCACAAGATATTGCTAGTTATCAGGTGGTTTTGTCAGCAGATGGCAAGATAGTGGGATTCCAACCTCTAAGCAGGGCGGCTGTTAACCATTGGGCTGCAAATCCCTTATCGAAGGAGTTATATGGAGGAAAAAAGCTTTCTCCTGGGCTGATGGAACCTGGTCTCAAGGTCCAGTGTCCAGATGAGATTGCTGTCATAGAGTTGTTGATGTCAGTAAAACCAGATGCATCTTTTGCCTTCGCCCGGCCAGTTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

615

Amino Acids

67.77

Weight (kDa)

6.59

Isoelectric Point (pI)

35.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28530 AT1G28530
fragaria_vesca	FvH4_3g08370
malus_domestica	MD05G1308100.v1.1
prunus_persica	Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1
pyrus_communis	pycom05g28480
rosa_chinensis	RchiOBHm_Chr5g0009531
rosa_laevigata	RLG00000031669
rosa_multiflora	Rmu_sc0002711.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066600 Rroxscaffold_1G00067300
rosa_rugosa	Rorug04G0444100 Rorug04G0444200
rosa_samantha	Rh5AG075600 Rh5BG070800 Rh5CG083500 Rh5DG071200
rosa_wichuraiana	Rw5G006970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	8
AccB1I	GGYRCC	2 cut(s)	130, 239
AccII	CGCG	3 cut(s)	223, 278, 587
AciI	CCGC	9 cut(s)	223, 269, 273, 276, 278, 294, 852, 933, 1664
AclWI	GGATC	3 cut(s)	582, 1125, 1204
AcoI	YGGCCR	4 cut(s)	174, 270, 1433, 1832
AcsI	RAATTY	4 cut(s)	88, 941, 1016, 1239
AcuI	CTGAAG	1 cut(s)	1359
AcyI	GRCGYC	3 cut(s)	5, 131, 240
AdeI	CACNNNGTG	1 cut(s)	725
AfaI	GTAC	5 cut(s)	206, 368, 1109, 1307, 1485
AfiI	CCNNNNNNNGG	2 cut(s)	51, 1830
AgsI	TTSAA	9 cut(s)	533, 581, 677, 701, 803, 818, 1022, 1511, 1579
AhlI	ACTAGT	2 cut(s)	535, 956
AjnI	CCWGG	4 cut(s)	550, 1435, 1729, 1744
AluBI	AGCT	6 cut(s)	422, 438, 974, 982, 1050, 1723
AluI	AGCT	6 cut(s)	422, 438, 974, 982, 1050, 1723
Alw21I	GWGCWC	4 cut(s)	306, 648, 1264, 1354
Alw26I	GTCTC	4 cut(s)	46, 332, 1228, 1754
Alw44I	GTGCAC	1 cut(s)	1350
AlwI	GGATC	3 cut(s)	582, 1125, 1204
AlwNI	CAGNNNCTG	1 cut(s)	1373
AoxI	GGCC	6 cut(s)	53, 174, 270, 291, 1433, 1832
ApaLI	GTGCAC	1 cut(s)	1350
ApeKI	GCWGC	2 cut(s)	63, 1682
ApoI	RAATTY	4 cut(s)	88, 941, 1016, 1239
AspLEI	GCGC	4 cut(s)	133, 223, 242, 262
AspS9I	GGNCC	5 cut(s)	151, 595, 935, 1473, 1756
AsuC2I	CCSGG	4 cut(s)	85, 351, 385, 1831
AsuHPI	GGTGA	5 cut(s)	148, 601, 1162, 1166, 1451
AsuII	TTCGAA	1 cut(s)	745
AvaII	GGWCC	5 cut(s)	151, 595, 935, 1473, 1756
BaeGI	GKGCMC	1 cut(s)	1354
BalI	TGGCCA	1 cut(s)	1435
BanI	GGYRCC	2 cut(s)	130, 239
BbsI	GAAGAC	2 cut(s)	1536, 1578
Bbv12I	GWGCWC	4 cut(s)	306, 648, 1264, 1354
BbvI	GCAGC	2 cut(s)	50, 1669
BccI	CCATC	8 cut(s)	36, 449, 910, 1072, 1339, 1495, 1622, 1732
BceAI	ACGGC	5 cut(s)	68, 144, 175, 227, 282
BciT130I	CCWGG	4 cut(s)	552, 1437, 1731, 1746
BcnI	CCSGG	4 cut(s)	85, 351, 385, 1831
BcoDI	GTCTC	4 cut(s)	46, 332, 1228, 1754
BcuI	ACTAGT	2 cut(s)	535, 956
BfaI	CTAG	7 cut(s)	402, 474, 536, 753, 957, 1047, 1602
BfmI	CTRYAG	1 cut(s)	155
BfoI	RGCGCY	3 cut(s)	134, 243, 263
BglII	AGATCT	1 cut(s)	1322
BisI	GCNGC	8 cut(s)	64, 224, 270, 273, 276, 294, 1665, 1683
BlsI	GCNGC	8 cut(s)	65, 225, 271, 274, 277, 295, 1666, 1684
BmcAI	AGTACT	1 cut(s)	1307
Bme1390I	CCNGG	8 cut(s)	85, 351, 385, 552, 1437, 1731, 1746, 1831
Bme18I	GGWCC	5 cut(s)	151, 595, 935, 1473, 1756
BmgT120I	GGNCC	5 cut(s)	151, 595, 935, 1473, 1756
BmiI	GGNNCC	4 cut(s)	132, 241, 597, 1743
BmrFI	CCNGG	8 cut(s)	85, 351, 385, 552, 1437, 1731, 1746, 1831
BmsI	GCATC	5 cut(s)	672, 982, 1592, 1801, 1823
BpiI	GAAGAC	2 cut(s)	1536, 1578
BpmI	CTGGAG	1 cut(s)	1048
Bpu14I	TTCGAA	1 cut(s)	745
BpuEI	CTTGAG	2 cut(s)	432, 1736
BpuMI	CCSGG	4 cut(s)	85, 351, 385, 1831
BsaBI	GATNNNNATC	1 cut(s)	996
BsaHI	GRCGYC	3 cut(s)	5, 131, 240
BsaI	GGTCTC	1 cut(s)	1754
BsaJI	CCNNGG	4 cut(s)	83, 243, 276, 1730
BsaXI	ACNNNNNCTCC	4 cut(s)	329, 359, 1021, 1051
Bsc4I	CCNNNNNNNGG	2 cut(s)	51, 1830
Bse118I	RCCGGY	2 cut(s)	133, 1475
Bse1I	ACTGG	3 cut(s)	924, 1759, 1835
Bse8I	GATNNNNATC	1 cut(s)	996
BseBI	CCWGG	4 cut(s)	552, 1437, 1731, 1746
BseDI	CCNNGG	4 cut(s)	83, 243, 276, 1730
BseGI	GGATG	3 cut(s)	28, 1015, 1506
BseJI	GATNNNNATC	1 cut(s)	996
BseLI	CCNNNNNNNGG	2 cut(s)	51, 1830
BseMII	CTCAG	3 cut(s)	159, 422, 792
BseNI	ACTGG	3 cut(s)	924, 1759, 1835
BseRI	GAGGAG	4 cut(s)	11, 14, 24, 300
BseSI	GKGCMC	1 cut(s)	1354
BseX3I	CGGCCG	2 cut(s)	174, 270
BseXI	GCAGC	2 cut(s)	50, 1669
BseYI	CCCAGC	2 cut(s)	226, 1050
BsgI	GTGCAG	1 cut(s)	891
Bsh1236I	CGCG	3 cut(s)	223, 278, 587
Bsh1285I	CGRYCG	2 cut(s)	177, 273
BshFI	GGCC	6 cut(s)	55, 176, 272, 293, 1435, 1834
BshNI	GGYRCC	2 cut(s)	130, 239
BsiEI	CGRYCG	2 cut(s)	177, 273
BsiHKAI	GWGCWC	4 cut(s)	306, 648, 1264, 1354
BsiSI	CCGG	6 cut(s)	85, 134, 350, 385, 1476, 1831
BsiWI	CGTACG	1 cut(s)	204
BslFI	GGGAC	1 cut(s)	581
BslI	CCNNNNNNNGG	2 cut(s)	51, 1830
BsmAI	GTCTC	4 cut(s)	46, 332, 1228, 1754
BsmBI	CGTCTC	1 cut(s)	46
BsmFI	GGGAC	1 cut(s)	581
BsnI	GGCC	6 cut(s)	55, 176, 272, 293, 1435, 1834
Bso31I	GGTCTC	1 cut(s)	1754
Bsp119I	TTCGAA	1 cut(s)	745
Bsp1286I	GDGCHC	4 cut(s)	306, 648, 1264, 1354
Bsp143I	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
BspACI	CCGC	9 cut(s)	223, 269, 273, 276, 278, 294, 852, 933, 1664
BspANI	GGCC	6 cut(s)	55, 176, 272, 293, 1435, 1834
BspCNI	CTCAG	3 cut(s)	160, 423, 791
BspFNI	CGCG	3 cut(s)	223, 278, 587
BspLI	GGNNCC	4 cut(s)	132, 241, 597, 1743
BspMAI	CTGCAG	1 cut(s)	159
BspPI	GGATC	3 cut(s)	582, 1125, 1204
BspQI	GCTCTTC	2 cut(s)	176, 678
BspT104I	TTCGAA	1 cut(s)	745
BspT107I	GGYRCC	2 cut(s)	130, 239
BspTNI	GGTCTC	1 cut(s)	1754
BsrFI	RCCGGY	2 cut(s)	133, 1475
BsrI	ACTGG	3 cut(s)	924, 1759, 1835
BssAI	RCCGGY	2 cut(s)	133, 1475
BssECI	CCNNGG	4 cut(s)	83, 243, 276, 1730
BssMI	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
BssNI	GRCGYC	3 cut(s)	5, 131, 240
Bst2UI	CCWGG	4 cut(s)	552, 1437, 1731, 1746
Bst4CI	ACNGT	3 cut(s)	863, 1215, 1375
Bst6I	CTCTTC	3 cut(s)	77, 176, 678
BstACI	GRCGYC	3 cut(s)	5, 131, 240
BstAPI	GCANNNNNTGC	2 cut(s)	1259, 1820
BstBI	TTCGAA	1 cut(s)	745
BstC8I	GCNNGC	8 cut(s)	109, 159, 188, 258, 320, 324, 648, 833
BstDEI	CTNAG	5 cut(s)	168, 431, 614, 778, 1655
BstDSI	CCRYGG	2 cut(s)	243, 276
BstF5I	GGATG	3 cut(s)	28, 1015, 1506
BstFNI	CGCG	3 cut(s)	223, 278, 587
BstH2I	RGCGCY	3 cut(s)	134, 243, 263
BstHHI	GCGC	4 cut(s)	133, 223, 242, 262
BstKTI	GATC	5 cut(s)	577, 1120, 1199, 1325, 1516
BstMAI	GTCTC	4 cut(s)	46, 332, 1228, 1754
BstMBI	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
BstMCI	CGRYCG	2 cut(s)	177, 273
BstMWI	GCNNNNNNNGC	5 cut(s)	192, 266, 275, 1259, 1820
BstNI	CCWGG	4 cut(s)	552, 1437, 1731, 1746
BstNSI	RCATGY	1 cut(s)	606
BstSCI	CCNGG	8 cut(s)	83, 349, 383, 550, 1435, 1729, 1744, 1829
BstSFI	CTRYAG	1 cut(s)	155
BstSLI	GKGCMC	1 cut(s)	1354
BstUI	CGCG	3 cut(s)	223, 278, 587
BstV1I	GCAGC	2 cut(s)	50, 1669
BstV2I	GAAGAC	2 cut(s)	1536, 1578
BstX2I	RGATCY	4 cut(s)	574, 1117, 1196, 1322
BstXI	CCANNNNNNTGG	1 cut(s)	1082
BstYI	RGATCY	4 cut(s)	574, 1117, 1196, 1322
BstZI	CGGCCG	2 cut(s)	174, 270
BsuRI	GGCC	6 cut(s)	55, 176, 272, 293, 1435, 1834
BtgI	CCRYGG	2 cut(s)	243, 276
BtsCI	GGATG	3 cut(s)	28, 1015, 1506
BtsIMutI	CAGTG	3 cut(s)	1264, 1367, 1766
Cac8I	GCNNGC	8 cut(s)	109, 159, 188, 258, 320, 324, 648, 833
CaiI	CAGNNNCTG	1 cut(s)	1373
CciNI	GCGGCCGC	1 cut(s)	270
CfoI	GCGC	4 cut(s)	133, 223, 242, 262
Cfr10I	RCCGGY	2 cut(s)	133, 1475
Cfr13I	GGNCC	5 cut(s)	151, 595, 935, 1473, 1756
Cfr42I	CCGCGG	1 cut(s)	279
CsiI	ACCWGGT	1 cut(s)	1744
Csp6I	GTAC	5 cut(s)	205, 367, 1108, 1306, 1484
CviAII	CATG	1 cut(s)	603
CviQI	GTAC	5 cut(s)	205, 367, 1108, 1306, 1484
DdeI	CTNAG	5 cut(s)	168, 431, 614, 778, 1655
DinI	GGCGCC	2 cut(s)	132, 241
DpnI	GATC	5 cut(s)	576, 1119, 1198, 1324, 1515
DpnII	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
DraI	TTTAAA	1 cut(s)	1521
DraIII	CACNNNGTG	1 cut(s)	725
EaeI	YGGCCR	4 cut(s)	174, 270, 1433, 1832
EagI	CGGCCG	2 cut(s)	174, 270
Eam1104I	CTCTTC	3 cut(s)	77, 176, 678
EarI	CTCTTC	3 cut(s)	77, 176, 678
EciI	GGCGGA	1 cut(s)	841
EclXI	CGGCCG	2 cut(s)	174, 270
Eco31I	GGTCTC	1 cut(s)	1754
Eco47I	GGWCC	5 cut(s)	151, 595, 935, 1473, 1756
Eco52I	CGGCCG	2 cut(s)	174, 270
Eco57I	CTGAAG	1 cut(s)	1359
EcoO109I	RGGNCCY	2 cut(s)	151, 595
EcoRI	GAATTC	2 cut(s)	88, 1239
EcoRII	CCWGG	4 cut(s)	550, 1435, 1729, 1744
EcoT22I	ATGCAT	2 cut(s)	665, 1816
EgeI	GGCGCC	2 cut(s)	132, 241
EheI	GGCGCC	2 cut(s)	132, 241
Esp3I	CGTCTC	1 cut(s)	46
FaeI	CATG	1 cut(s)	606
FaqI	GGGAC	1 cut(s)	581
FatI	CATG	1 cut(s)	602
Fnu4HI	GCNGC	8 cut(s)	64, 224, 270, 273, 276, 294, 1665, 1683
FokI	GGATG	3 cut(s)	15, 1022, 1513
Fsp4HI	GCNGC	8 cut(s)	64, 224, 270, 273, 276, 294, 1665, 1683
FspBI	CTAG	7 cut(s)	402, 474, 536, 753, 957, 1047, 1602
GlaI	GCGC	4 cut(s)	132, 222, 241, 261
GluI	GCNGC	8 cut(s)	64, 224, 270, 273, 276, 294, 1665, 1683
GsaI	CCCAGC	2 cut(s)	230, 1054
GsuI	CTGGAG	1 cut(s)	1048
HaeII	RGCGCY	3 cut(s)	134, 243, 263
HaeIII	GGCC	6 cut(s)	55, 176, 272, 293, 1435, 1834
HapII	CCGG	6 cut(s)	85, 134, 350, 385, 1476, 1831
HhaI	GCGC	4 cut(s)	133, 223, 242, 262
Hin1I	GRCGYC	3 cut(s)	5, 131, 240
Hin1II	CATG	1 cut(s)	606
Hin6I	GCGC	4 cut(s)	131, 221, 240, 260
HinP1I	GCGC	4 cut(s)	131, 221, 240, 260
HincII	GTYRAC	3 cut(s)	462, 1539, 1672
HindII	GTYRAC	3 cut(s)	462, 1539, 1672
HindIII	AAGCTT	1 cut(s)	1721
HinfI	GANTC	5 cut(s)	170, 773, 1397, 1421, 1644
HpaI	GTTAAC	1 cut(s)	1672
HpaII	CCGG	6 cut(s)	85, 134, 350, 385, 1476, 1831
HphI	GGTGA	5 cut(s)	148, 601, 1162, 1166, 1451
Hpy166II	GTNNAC	7 cut(s)	428, 462, 897, 1280, 1352, 1539, 1672
Hpy188I	TCNGA	6 cut(s)	123, 169, 361, 625, 1339, 1369
Hpy188III	TCNNGA	8 cut(s)	379, 449, 474, 523, 578, 698, 938, 1766
Hpy8I	GTNNAC	7 cut(s)	428, 462, 897, 1280, 1352, 1539, 1672
Hpy99I	CGWCG	1 cut(s)	302
HpyAV	CCTTC	6 cut(s)	55, 66, 565, 1016, 1693, 1834
HpyCH4III	ACNGT	3 cut(s)	863, 1215, 1375
HpyCH4IV	ACGT	2 cut(s)	5, 203
HpyCH4V	TGCA	9 cut(s)	157, 602, 663, 908, 1232, 1253, 1352, 1685, 1814
HpyF10VI	GCNNNNNNNGC	5 cut(s)	192, 266, 275, 1259, 1820
HpyF3I	CTNAG	5 cut(s)	168, 431, 614, 778, 1655
HpySE526I	ACGT	2 cut(s)	5, 203
Hsp92I	GRCGYC	3 cut(s)	5, 131, 240
Hsp92II	CATG	1 cut(s)	606
HspAI	GCGC	4 cut(s)	131, 221, 240, 260
KasI	GGCGCC	2 cut(s)	130, 239
KspAI	GTTAAC	1 cut(s)	1672
KspI	CCGCGG	1 cut(s)	279
Kzo9I	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
LguI	GCTCTTC	2 cut(s)	176, 678
LmnI	GCTCC	2 cut(s)	142, 443
Lsp1109I	GCAGC	2 cut(s)	50, 1669
LweI	GCATC	5 cut(s)	672, 982, 1592, 1801, 1823
MabI	ACCWGGT	1 cut(s)	1744
MaeI	CTAG	7 cut(s)	402, 474, 536, 753, 957, 1047, 1602
MaeII	ACGT	2 cut(s)	5, 203
MaeIII	GTNAC	2 cut(s)	136, 607
MalI	GATC	5 cut(s)	576, 1119, 1198, 1324, 1515
MboI	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
MflI	RGATCY	4 cut(s)	574, 1117, 1196, 1322
MhlI	GDGCHC	4 cut(s)	306, 648, 1264, 1354
MlsI	TGGCCA	1 cut(s)	1435
MluNI	TGGCCA	1 cut(s)	1435
Mly113I	GGCGCC	2 cut(s)	131, 240
MlyI	GAGTC	1 cut(s)	179
MmeI	TCCRAC	5 cut(s)	384, 932, 1063, 1362, 1672
Mox20I	TGGCCA	1 cut(s)	1435
Mph1103I	ATGCAT	2 cut(s)	665, 1816
MscI	TGGCCA	1 cut(s)	1435
MseI	TTAA	7 cut(s)	411, 846, 867, 1208, 1407, 1520, 1671
MslI	CAYNNNNRTG	2 cut(s)	1008, 1296
Msp20I	TGGCCA	1 cut(s)	1435
MspA1I	CMGCKG	1 cut(s)	278
MspI	CCGG	6 cut(s)	85, 134, 350, 385, 1476, 1831
MspR9I	CCNGG	8 cut(s)	85, 351, 385, 552, 1437, 1731, 1746, 1831
MvaI	CCWGG	4 cut(s)	552, 1437, 1731, 1746
MvnI	CGCG	3 cut(s)	223, 278, 587
MwoI	GCNNNNNNNGC	5 cut(s)	192, 266, 275, 1259, 1820
NarI	GGCGCC	2 cut(s)	131, 240
NciI	CCSGG	4 cut(s)	85, 351, 385, 1831
NdeII	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
NlaIII	CATG	1 cut(s)	606
NlaIV	GGNNCC	4 cut(s)	132, 241, 597, 1743
NmeAIII	GCCGAG	1 cut(s)	202
NmuCI	GTSAC	2 cut(s)	136, 607
NotI	GCGGCCGC	1 cut(s)	270
NsiI	ATGCAT	2 cut(s)	665, 1816
NspI	RCATGY	1 cut(s)	606
NspV	TTCGAA	1 cut(s)	745
PciSI	GCTCTTC	2 cut(s)	176, 678
PfeI	GAWTC	4 cut(s)	773, 1397, 1421, 1644
Pfl23II	CGTACG	1 cut(s)	204
PkrI	GCNGC	8 cut(s)	65, 225, 271, 274, 277, 295, 1666, 1684
PleI	GAGTC	1 cut(s)	178
PluTI	GGCGCC	2 cut(s)	134, 243
PpsI	GAGTC	1 cut(s)	178
PpuMI	RGGWCCY	2 cut(s)	151, 595
Psp5II	RGGWCCY	2 cut(s)	151, 595
Psp6I	CCWGG	4 cut(s)	550, 1435, 1729, 1744
PspFI	CCCAGC	2 cut(s)	226, 1050
PspGI	CCWGG	4 cut(s)	550, 1435, 1729, 1744
PspLI	CGTACG	1 cut(s)	204
PspN4I	GGNNCC	4 cut(s)	132, 241, 597, 1743
PspPI	GGNCC	5 cut(s)	151, 595, 935, 1473, 1756
PspPPI	RGGWCCY	2 cut(s)	151, 595
PstI	CTGCAG	1 cut(s)	159
PstNI	CAGNNNCTG	1 cut(s)	1373
PsuI	RGATCY	4 cut(s)	574, 1117, 1196, 1322
RsaI	GTAC	5 cut(s)	206, 368, 1109, 1307, 1485
RsaNI	GTAC	5 cut(s)	205, 367, 1108, 1306, 1484
RseI	CAYNNNNRTG	2 cut(s)	1008, 1296
SacII	CCGCGG	1 cut(s)	279
SapI	GCTCTTC	2 cut(s)	176, 678
SaqAI	TTAA	7 cut(s)	411, 846, 867, 1208, 1407, 1520, 1671
SatI	GCNGC	8 cut(s)	64, 224, 270, 273, 276, 294, 1665, 1683
Sau3AI	GATC	5 cut(s)	574, 1117, 1196, 1322, 1513
Sau96I	GGNCC	5 cut(s)	151, 595, 935, 1473, 1756
SbfI	CCTGCAGG	1 cut(s)	159
ScaI	AGTACT	1 cut(s)	1307
SchI	GAGTC	1 cut(s)	179
ScrFI	CCNGG	8 cut(s)	85, 351, 385, 552, 1437, 1731, 1746, 1831
SdaI	CCTGCAGG	1 cut(s)	159
SduI	GDGCHC	4 cut(s)	306, 648, 1264, 1354
SexAI	ACCWGGT	1 cut(s)	1744
SfaNI	GCATC	5 cut(s)	672, 982, 1592, 1801, 1823
SfcI	CTRYAG	1 cut(s)	155
SfoI	GGCGCC	2 cut(s)	132, 241
Sfr303I	CCGCGG	1 cut(s)	279
SfuI	TTCGAA	1 cut(s)	745
SgrAI	CRCCGGYG	1 cut(s)	133
SgrBI	CCGCGG	1 cut(s)	279
SinI	GGWCC	5 cut(s)	151, 595, 935, 1473, 1756
SmiMI	CAYNNNNRTG	2 cut(s)	1008, 1296
SmlI	CTYRAG	2 cut(s)	447, 1751
SmoI	CTYRAG	2 cut(s)	447, 1751
SpeI	ACTAGT	2 cut(s)	535, 956
Sse8387I	CCTGCAGG	1 cut(s)	159
SsiI	CCGC	9 cut(s)	223, 269, 273, 276, 278, 294, 852, 933, 1664
SspDI	GGCGCC	2 cut(s)	130, 239
SspMI	CTAG	7 cut(s)	402, 474, 536, 753, 957, 1047, 1602
StyD4I	CCNGG	8 cut(s)	83, 349, 383, 550, 1435, 1729, 1744, 1829
TaaI	ACNGT	3 cut(s)	863, 1215, 1375
TaiI	ACGT	2 cut(s)	8, 206
TaqI	TCGA	5 cut(s)	380, 745, 837, 1697, 1840
TatI	WGTACW	2 cut(s)	1107, 1305
TauI	GCSGC	6 cut(s)	226, 272, 275, 278, 296, 1667
TfiI	GAWTC	4 cut(s)	773, 1397, 1421, 1644
Tru1I	TTAA	7 cut(s)	411, 846, 867, 1208, 1407, 1520, 1671
Tru9I	TTAA	7 cut(s)	411, 846, 867, 1208, 1407, 1520, 1671
TscAI	CASTG	3 cut(s)	1264, 1367, 1766
TseFI	GTSAC	2 cut(s)	136, 607
TseI	GCWGC	2 cut(s)	63, 1682
Tsp45I	GTSAC	2 cut(s)	136, 607
TspDTI	ATGAA	5 cut(s)	584, 609, 642, 725, 1584
TspGWI	ACGGA	4 cut(s)	155, 297, 646, 772
TspRI	CASTG	3 cut(s)	1264, 1367, 1766
VneI	GTGCAC	1 cut(s)	1350
VpaK11BI	GGWCC	5 cut(s)	151, 595, 935, 1473, 1756
XapI	RAATTY	4 cut(s)	88, 941, 1016, 1239
XbaI	TCTAGA	1 cut(s)	473
XceI	RCATGY	1 cut(s)	606
XspI	CTAG	7 cut(s)	402, 474, 536, 753, 957, 1047, 1602
ZraI	GACGTC	1 cut(s)	6
ZrmI	AGTACT	1 cut(s)	1307
Zsp2I	ATGCAT	2 cut(s)	665, 1816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.