Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0010401

Physical Location & Seq

Genomic Coordinates Reverse (-)

43934630 .. 43939051

Gene Structure 4422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1308100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGCGTCCATTCAATCCATCTTTCTCCACGCTCCACTCTTTGCCCTGAGGCCCCGCCACCTCTCACCTATAACCCTCGAACCCCCTCGAAATGTCCATTTTACCCTTGCCCGCTCTTCCAATCGGAAAGCCGTCCCAGTCACAGAGCAGGAGGTCCTCCAAGCCGTGTCCGAGTCCGACGAGAAAGTCCTCCCCGGCGTGAGAACGTACGAGAACGACGCCGCTCGGCTCGCTTTAGTCGGCGCTGTCGAATTCGAGCAGGCTCTCACGGCGGCTGCGGCCGACGGAGGACAAGCTGCCGACGAGCACATCAGCTCGGGGATGCCCGCTATGGTTGTGGAGACCTTATTCCCGGGTCATCCGGGCCCCCGCAGCACAGTCTCGACCCGACTGTTTCTGCCTGCTAGGAAAGTTAAAGAGAAAGCCGGCAAACTGAGAAGGTCCATCACCGATGATATGCTGTCAACCACTACGTCGAGAAACATTCTTTCGATGACATTTAGGCAAGTAGTGCTACACCTGCTGTGGAACTTTGAGCTGGTTGTCTTTAAATCGGGAACGGAAAGGGATATGGAGGATCTCGAGAACCCAAGAGAGGTCCCTGCATCTTTCGCCCTTAGTTCATCGGATGAACGGATTATCTCTGTGCTTGCCGAAGTTGTGTGCAGCTCTGCTCTTCAAAGCACTGAAAAACAATTTCTTGAAGATTACGTAGGCAAAACTTCGAGTAATCTTCTCCGCTGGTTCCGAAAGCCTAGAAGGACCGTGTCAGAAGATTCCTCAGTTGTCATATACAAATTATTTGAAGATGAGATAGTTGAAAATGCTAAGAGTTTGCTGGACCTTTTTAATTCAACAAAGGGAAGTTTTAAGCCCGTAAAAACAAAATCAAAGAACTATTGGTGGACACCAACTGCACTCTCTAAATTGGAAAAGATTGGTGGTCCTGAGTTTAGTTCATGGACTAGCGAGTATGTTCCTGCTTATAGGCTAGAAATTGATGCTAGTCAACATGAGAATGTGAAATTTGAAGGCTGGAGAAAATCTGAGGAGAATAAATGTGAAGTTCTCATGACACACTCCCAAATGGTTGGATTGGCGGACCTAATAGATATGTATTACGAAGATCCTTACACAATGCCGGATAAACAGCTATCATGTGGTGTTGTTGCCAATTCTGCTAATTTGTCTAATAAGAAGACGGGCTCTTTCTTGTTAAGAATGCTACCTATCACCATTGGGAGTGGAATTTTTCTTATAACAATTAGTGCTCTTTGTCAACGTGGTTTTCCTTACGCAAATAAAGGTGGAAAGTACTCTAGAGAACACATTTCAATTCCATCATCTGAAGTTGGTAGTGCACAATACCAGTCGGTGGATGCTGTGAAGTTGGAAGCATTTTGCATATCGGTTGTCAGAAAGATAAAGGATGCCCTGGGTTGGCCGGGTGAGATCATGATGGAAACAGATGTGGGTGCTTGGACTGGTAAAGTACCAAATTATTTGAGGATGGTAGGTGATGATTGTTCCAACAACGAAGCAATGTCAACTATTTCTTCTTCTGAGAAAATTGATGAAGACTTGAAAGCATCAGCACAAGATATTGCAAGTTATCAGGTGGTTCTGTCAACTGATGGTGAGATAGTCGGGTTCCAACCTTTAAGCAGTGTGGCTGTTAACCATTGGGCTGCCAATCCCTTGGCAAAAGAGTTATACAGGGGGCGAAAGCTTTCACCTGGTTTAACTGAACCCGGTCTTAAGGTCCAGCGTCCGAACGAGGTCGCCCTCATAGAGTTGTTAATGTCAGTAAAACCAGATGGCTGCTTTGCTTTGGCCAGGCCAGTTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

617

Amino Acids

68.16

Weight (kDa)

6.15

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28530 AT1G28530
fragaria_vesca	FvH4_3g08370
malus_domestica	MD05G1308100.v1.1
prunus_persica	Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1 Prupe.4G054700_v2.0.a1
pyrus_communis	pycom05g28480
rosa_chinensis	RchiOBHm_Chr5g0009531
rosa_laevigata	RLG00000031669
rosa_multiflora	Rmu_sc0002711.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066600 Rroxscaffold_1G00067300
rosa_rugosa	Rorug04G0444100 Rorug04G0444200
rosa_samantha	Rh5AG075600 Rh5BG070800 Rh5CG083500 Rh5DG071200
rosa_wichuraiana	Rw5G006970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1259
AarI	CACCTGC	1 cut(s)	528
AasI	GACNNNNNNGTC	1 cut(s)	185
Acc36I	ACCTGC	1 cut(s)	528
AccB7I	CCANNNNNTGG	1 cut(s)	1375
AccBSI	CCGCTC	2 cut(s)	114, 224
AciI	CCGC	9 cut(s)	55, 112, 222, 272, 278, 327, 370, 739, 1100
AclWI	GGATC	2 cut(s)	585, 1121
AcoI	YGGCCR	3 cut(s)	279, 1442, 1833
AcsI	RAATTY	3 cut(s)	251, 1025, 1248
AcuI	CTGAAG	1 cut(s)	1368
AcyI	GRCGYC	2 cut(s)	5, 219
AfaI	GTAC	3 cut(s)	209, 1316, 1494
AfiI	CCNNNNNNNGG	3 cut(s)	595, 1375, 1440
AflII	CTTAAG	1 cut(s)	1757
AgsI	TTSAA	9 cut(s)	14, 680, 704, 806, 821, 855, 1031, 1335, 1585
AjnI	CCWGG	3 cut(s)	1434, 1735, 1835
AluBI	AGCT	6 cut(s)	296, 315, 538, 669, 1153, 1729
AluI	AGCT	6 cut(s)	296, 315, 538, 669, 1153, 1729
Alw21I	GWGCWC	3 cut(s)	309, 1273, 1363
Alw26I	GTCTC	2 cut(s)	335, 385
Alw44I	GTGCAC	1 cut(s)	1359
AlwI	GGATC	2 cut(s)	585, 1121
Ama87I	CYCGRG	3 cut(s)	316, 352, 581
AoxI	GGCC	6 cut(s)	50, 279, 364, 1442, 1833, 1838
ApaI	GGGCCC	1 cut(s)	368
ApaLI	GTGCAC	1 cut(s)	1359
ApeKI	GCWGC	6 cut(s)	275, 296, 372, 666, 1688, 1821
ApoI	RAATTY	3 cut(s)	251, 1025, 1248
Asp700I	GAANNNNTTC	1 cut(s)	1729
AspLEI	GCGC	1 cut(s)	245
AsuC2I	CCSGG	6 cut(s)	195, 353, 354, 363, 1446, 1752
AsuHPI	GGTGA	7 cut(s)	57, 439, 1225, 1460, 1529, 1649, 1725
AvaI	CYCGRG	3 cut(s)	316, 352, 581
AvaII	GGWCC	8 cut(s)	154, 441, 598, 762, 841, 944, 1102, 1762
AxyI	CCTNAGG	1 cut(s)	47
BaeGI	GKGCMC	2 cut(s)	368, 1363
BalI	TGGCCA	1 cut(s)	1835
BanII	GRGCYC	2 cut(s)	368, 1208
BbsI	GAAGAC	2 cut(s)	1205, 1584
Bbv12I	GWGCWC	3 cut(s)	309, 1273, 1363
BbvI	GCAGC	6 cut(s)	262, 283, 384, 678, 1675, 1808
BccI	CCATC	7 cut(s)	26, 452, 1348, 1453, 1504, 1628, 1811
BceAI	ACGGC	3 cut(s)	116, 149, 285
BciT130I	CCWGG	3 cut(s)	1436, 1737, 1837
BcnI	CCSGG	6 cut(s)	195, 353, 354, 363, 1446, 1752
BcoDI	GTCTC	2 cut(s)	335, 385
BfaI	CTAG	6 cut(s)	405, 756, 966, 992, 1005, 1320
BfoI	RGCGCY	1 cut(s)	246
BfrI	CTTAAG	1 cut(s)	1757
BfuAI	ACCTGC	1 cut(s)	528
BisI	GCNGC	9 cut(s)	222, 273, 276, 279, 297, 373, 667, 1689, 1822
BlsI	GCNGC	9 cut(s)	223, 274, 277, 280, 298, 374, 668, 1690, 1823
BmcAI	AGTACT	1 cut(s)	1316
Bme1390I	CCNGG	9 cut(s)	195, 353, 354, 363, 1436, 1446, 1737, 1752, 1837
Bme18I	GGWCC	8 cut(s)	154, 441, 598, 762, 841, 944, 1102, 1762
BmeT110I	CYCGRG	3 cut(s)	316, 352, 581
BmiI	GGNNCC	6 cut(s)	53, 366, 367, 600, 746, 1652
BmrFI	CCNGG	9 cut(s)	195, 353, 354, 363, 1436, 1446, 1737, 1752, 1837
BmrI	ACTGGG	1 cut(s)	131
BmsI	GCATC	6 cut(s)	312, 614, 991, 1369, 1420, 1598
BmuI	ACTGGG	1 cut(s)	131
BpiI	GAAGAC	2 cut(s)	1205, 1584
BpmI	CTGGAG	1 cut(s)	1057
BpuMI	CCSGG	6 cut(s)	195, 353, 354, 363, 1446, 1752
BsaAI	YACGTR	1 cut(s)	712
BsaHI	GRCGYC	2 cut(s)	5, 219
BsaI	GGTCTC	1 cut(s)	335
BsaJI	CCNNGG	5 cut(s)	193, 352, 1434, 1435, 1698
Bsc4I	CCNNNNNNNGG	3 cut(s)	595, 1375, 1440
Bse118I	RCCGGY	1 cut(s)	425
Bse1I	ACTGG	4 cut(s)	137, 1369, 1489, 1841
Bse21I	CCTNAGG	1 cut(s)	47
Bse3DI	GCAATG	1 cut(s)	1548
BseBI	CCWGG	3 cut(s)	1436, 1737, 1837
BseDI	CCNNGG	5 cut(s)	193, 352, 1434, 1435, 1698
BseGI	GGATG	6 cut(s)	327, 358, 634, 1384, 1435, 1515
BseLI	CCNNNNNNNGG	3 cut(s)	595, 1375, 1440
BseMI	GCAATG	1 cut(s)	1548
BseMII	CTCAG	6 cut(s)	38, 425, 795, 939, 1038, 1554
BseNI	ACTGG	4 cut(s)	137, 1369, 1489, 1841
BseRI	GAGGAG	1 cut(s)	1064
BseSI	GKGCMC	2 cut(s)	368, 1363
BseX3I	CGGCCG	1 cut(s)	279
BseXI	GCAGC	6 cut(s)	262, 283, 384, 678, 1675, 1808
BsgI	GTGCAG	2 cut(s)	685, 900
Bsh1285I	CGRYCG	1 cut(s)	282
BshFI	GGCC	6 cut(s)	52, 281, 366, 1444, 1835, 1840
BsiEI	CGRYCG	1 cut(s)	282
BsiHKAI	GWGCWC	3 cut(s)	309, 1273, 1363
BsiHKCI	CYCGRG	3 cut(s)	316, 352, 581
BsiSI	CCGG	7 cut(s)	195, 353, 362, 426, 1142, 1445, 1752
BsiWI	CGTACG	1 cut(s)	207
BslFI	GGGAC	2 cut(s)	119, 584
BslI	CCNNNNNNNGG	3 cut(s)	595, 1375, 1440
BsmAI	GTCTC	2 cut(s)	335, 385
BsmFI	GGGAC	2 cut(s)	119, 584
BsmI	GAATGC	1 cut(s)	1227
BsnI	GGCC	6 cut(s)	52, 281, 366, 1444, 1835, 1840
Bso31I	GGTCTC	1 cut(s)	335
BsoBI	CYCGRG	3 cut(s)	316, 352, 581
Bsp120I	GGGCCC	1 cut(s)	364
Bsp1286I	GDGCHC	5 cut(s)	309, 368, 1208, 1273, 1363
Bsp143I	GATC	3 cut(s)	577, 1126, 1452
BspACI	CCGC	9 cut(s)	55, 112, 222, 272, 278, 327, 370, 739, 1100
BspANI	GGCC	6 cut(s)	52, 281, 366, 1444, 1835, 1840
BspCNI	CTCAG	6 cut(s)	39, 426, 794, 940, 1039, 1555
BspHI	TCATGA	2 cut(s)	1071, 1455
BspLI	GGNNCC	6 cut(s)	53, 366, 367, 600, 746, 1652
BspMI	ACCTGC	1 cut(s)	528
BspPI	GGATC	2 cut(s)	585, 1121
BspQI	GCTCTTC	2 cut(s)	121, 681
BspTI	CTTAAG	1 cut(s)	1757
BspTNI	GGTCTC	1 cut(s)	335
BsrBI	CCGCTC	2 cut(s)	114, 224
BsrDI	GCAATG	1 cut(s)	1548
BsrFI	RCCGGY	1 cut(s)	425
BsrI	ACTGG	4 cut(s)	137, 1369, 1489, 1841
BssAI	RCCGGY	1 cut(s)	425
BssECI	CCNNGG	5 cut(s)	193, 352, 1434, 1435, 1698
BssMI	GATC	3 cut(s)	577, 1126, 1452
BssNI	GRCGYC	2 cut(s)	5, 219
BssT1I	CCWWGG	1 cut(s)	1698
Bst2UI	CCWGG	3 cut(s)	1436, 1737, 1837
Bst4CI	ACNGT	3 cut(s)	379, 393, 766
Bst6I	CTCTTC	2 cut(s)	121, 681
BstACI	GRCGYC	2 cut(s)	5, 219
BstAFI	CTTAAG	1 cut(s)	1757
BstAPI	GCANNNNNTGC	1 cut(s)	511
BstBAI	YACGTR	1 cut(s)	712
BstC8I	GCNNGC	7 cut(s)	112, 231, 261, 327, 402, 427, 651
BstDEI	CTNAG	8 cut(s)	47, 434, 617, 781, 828, 948, 1047, 1563
BstF5I	GGATG	6 cut(s)	327, 358, 634, 1384, 1435, 1515
BstH2I	RGCGCY	1 cut(s)	246
BstHHI	GCGC	1 cut(s)	245
BstKTI	GATC	3 cut(s)	580, 1129, 1455
BstMAI	GTCTC	2 cut(s)	335, 385
BstMBI	GATC	3 cut(s)	577, 1126, 1452
BstMCI	CGRYCG	1 cut(s)	282
BstMWI	GCNNNNNNNGC	8 cut(s)	230, 269, 278, 372, 511, 520, 611, 1178
BstNI	CCWGG	3 cut(s)	1436, 1737, 1837
BstSCI	CCNGG	9 cut(s)	193, 351, 352, 361, 1434, 1444, 1735, 1750, 1835
BstSLI	GKGCMC	2 cut(s)	368, 1363
BstSNI	TACGTA	1 cut(s)	712
BstV1I	GCAGC	6 cut(s)	262, 283, 384, 678, 1675, 1808
BstV2I	GAAGAC	2 cut(s)	1205, 1584
BstX2I	RGATCY	2 cut(s)	577, 1126
BstXI	CCANNNNNNTGG	2 cut(s)	1091, 1699
BstYI	RGATCY	2 cut(s)	577, 1126
BstZI	CGGCCG	1 cut(s)	279
Bsu36I	CCTNAGG	1 cut(s)	47
BsuRI	GGCC	6 cut(s)	52, 281, 366, 1444, 1835, 1840
BtsCI	GGATG	6 cut(s)	327, 358, 634, 1384, 1435, 1515
BtsI	GCAGTG	1 cut(s)	1672
BtsIMutI	CAGTG	2 cut(s)	684, 1672
BveI	ACCTGC	1 cut(s)	528
Cac8I	GCNNGC	7 cut(s)	112, 231, 261, 327, 402, 427, 651
CciI	TCATGA	2 cut(s)	1071, 1455
CfoI	GCGC	1 cut(s)	245
Cfr10I	RCCGGY	1 cut(s)	425
Cfr9I	CCCGGG	1 cut(s)	352
CseI	GACGC	2 cut(s)	227, 1757
CsiI	ACCWGGT	1 cut(s)	1735
Csp6I	GTAC	3 cut(s)	208, 1315, 1493
CviAII	CATG	5 cut(s)	960, 1013, 1072, 1158, 1456
CviQI	GTAC	3 cut(s)	208, 1315, 1493
DdeI	CTNAG	8 cut(s)	47, 434, 617, 781, 828, 948, 1047, 1563
DpnI	GATC	3 cut(s)	579, 1128, 1454
DpnII	GATC	3 cut(s)	577, 1126, 1452
DraI	TTTAAA	1 cut(s)	550
DrdI	GACNNNNNNGTC	1 cut(s)	185
DseDI	GACNNNNNNGTC	1 cut(s)	185
EaeI	YGGCCR	3 cut(s)	279, 1442, 1833
EagI	CGGCCG	1 cut(s)	279
Eam1104I	CTCTTC	2 cut(s)	121, 681
EarI	CTCTTC	2 cut(s)	121, 681
EciI	GGCGGA	1 cut(s)	1115
EclXI	CGGCCG	1 cut(s)	279
Eco105I	TACGTA	1 cut(s)	712
Eco130I	CCWWGG	1 cut(s)	1698
Eco24I	GRGCYC	2 cut(s)	368, 1208
Eco31I	GGTCTC	1 cut(s)	335
Eco47I	GGWCC	8 cut(s)	154, 441, 598, 762, 841, 944, 1102, 1762
Eco52I	CGGCCG	1 cut(s)	279
Eco57I	CTGAAG	1 cut(s)	1368
Eco81I	CCTNAGG	1 cut(s)	47
Eco88I	CYCGRG	3 cut(s)	316, 352, 581
EcoO109I	RGGNCCY	4 cut(s)	51, 154, 365, 598
EcoRI	GAATTC	1 cut(s)	251
EcoRII	CCWGG	3 cut(s)	1434, 1735, 1835
EcoT14I	CCWWGG	1 cut(s)	1698
EcoT38I	GRGCYC	2 cut(s)	368, 1208
ErhI	CCWWGG	1 cut(s)	1698
FaeI	CATG	5 cut(s)	963, 1016, 1075, 1161, 1459
FaqI	GGGAC	2 cut(s)	119, 584
FatI	CATG	5 cut(s)	959, 1012, 1071, 1157, 1455
FauI	CCCGC	4 cut(s)	62, 119, 334, 377
Fnu4HI	GCNGC	9 cut(s)	222, 273, 276, 279, 297, 373, 667, 1689, 1822
FokI	GGATG	6 cut(s)	334, 345, 641, 1391, 1442, 1522
FriOI	GRGCYC	2 cut(s)	368, 1208
Fsp4HI	GCNGC	9 cut(s)	222, 273, 276, 279, 297, 373, 667, 1689, 1822
FspBI	CTAG	6 cut(s)	405, 756, 966, 992, 1005, 1320
GlaI	GCGC	1 cut(s)	244
GluI	GCNGC	9 cut(s)	222, 273, 276, 279, 297, 373, 667, 1689, 1822
GsuI	CTGGAG	1 cut(s)	1057
HaeII	RGCGCY	1 cut(s)	246
HaeIII	GGCC	6 cut(s)	52, 281, 366, 1444, 1835, 1840
HapII	CCGG	7 cut(s)	195, 353, 362, 426, 1142, 1445, 1752
HgaI	GACGC	2 cut(s)	227, 1757
HhaI	GCGC	1 cut(s)	245
Hin1I	GRCGYC	2 cut(s)	5, 219
Hin1II	CATG	5 cut(s)	963, 1016, 1075, 1161, 1459
Hin6I	GCGC	1 cut(s)	243
HinP1I	GCGC	1 cut(s)	243
HincII	GTYRAC	6 cut(s)	465, 1010, 1280, 1548, 1629, 1678
HindII	GTYRAC	6 cut(s)	465, 1010, 1280, 1548, 1629, 1678
HindIII	AAGCTT	1 cut(s)	1727
HinfI	GANTC	2 cut(s)	173, 776
HpaI	GTTAAC	1 cut(s)	1678
HpaII	CCGG	7 cut(s)	195, 353, 362, 426, 1142, 1445, 1752
HphI	GGTGA	7 cut(s)	57, 439, 1225, 1460, 1529, 1649, 1725
Hpy166II	GTNNAC	8 cut(s)	465, 906, 1010, 1280, 1361, 1548, 1629, 1678
Hpy8I	GTNNAC	8 cut(s)	465, 906, 1010, 1280, 1361, 1548, 1629, 1678
Hpy99I	CGWCG	5 cut(s)	182, 221, 287, 305, 478
HpyAV	CCTTC	3 cut(s)	432, 753, 1025
HpyCH4III	ACNGT	3 cut(s)	379, 393, 766
HpyCH4IV	ACGT	4 cut(s)	206, 473, 711, 1282
HpyCH4V	TGCA	6 cut(s)	605, 666, 917, 1361, 1404, 1607
HpyF10VI	GCNNNNNNNGC	8 cut(s)	230, 269, 278, 372, 511, 520, 611, 1178
HpyF3I	CTNAG	8 cut(s)	47, 434, 617, 781, 828, 948, 1047, 1563
HpySE526I	ACGT	4 cut(s)	206, 473, 711, 1282
Hsp92I	GRCGYC	2 cut(s)	5, 219
Hsp92II	CATG	5 cut(s)	963, 1016, 1075, 1161, 1459
HspAI	GCGC	1 cut(s)	243
KroI	GCCGGC	1 cut(s)	425
KroNI	GCCGGC	1 cut(s)	427
KspAI	GTTAAC	1 cut(s)	1678
Kzo9I	GATC	3 cut(s)	577, 1126, 1452
LguI	GCTCTTC	2 cut(s)	121, 681
LmnI	GCTCC	1 cut(s)	37
Lsp1109I	GCAGC	6 cut(s)	262, 283, 384, 678, 1675, 1808
LweI	GCATC	6 cut(s)	312, 614, 991, 1369, 1420, 1598
MabI	ACCWGGT	1 cut(s)	1735
MaeI	CTAG	6 cut(s)	405, 756, 966, 992, 1005, 1320
MaeII	ACGT	4 cut(s)	206, 473, 711, 1282
MaeIII	GTNAC	1 cut(s)	139
MalI	GATC	3 cut(s)	579, 1128, 1454
MbiI	CCGCTC	2 cut(s)	114, 224
MboI	GATC	3 cut(s)	577, 1126, 1452
MflI	RGATCY	2 cut(s)	577, 1126
MhlI	GDGCHC	5 cut(s)	309, 368, 1208, 1273, 1363
MlsI	TGGCCA	1 cut(s)	1835
MluNI	TGGCCA	1 cut(s)	1835
MlyI	GAGTC	1 cut(s)	182
MmeI	TCCRAC	5 cut(s)	201, 1072, 1371, 1554, 1678
Mox20I	TGGCCA	1 cut(s)	1835
MroNI	GCCGGC	1 cut(s)	425
MroXI	GAANNNNTTC	1 cut(s)	1729
MscI	TGGCCA	1 cut(s)	1835
MslI	CAYNNNNRTG	1 cut(s)	1017
Msp20I	TGGCCA	1 cut(s)	1835
MspA1I	CMGCKG	1 cut(s)	741
MspCI	CTTAAG	1 cut(s)	1757
MspI	CCGG	7 cut(s)	195, 353, 362, 426, 1142, 1445, 1752
MspR9I	CCNGG	9 cut(s)	195, 353, 354, 363, 1436, 1446, 1737, 1752, 1837
Mva1269I	GAATGC	1 cut(s)	1227
MvaI	CCWGG	3 cut(s)	1436, 1737, 1837
MwoI	GCNNNNNNNGC	8 cut(s)	230, 269, 278, 372, 511, 520, 611, 1178
NaeI	GCCGGC	1 cut(s)	427
NciI	CCSGG	6 cut(s)	195, 353, 354, 363, 1446, 1752
NdeII	GATC	3 cut(s)	577, 1126, 1452
NgoMIV	GCCGGC	1 cut(s)	425
NlaIII	CATG	5 cut(s)	963, 1016, 1075, 1161, 1459
NlaIV	GGNNCC	6 cut(s)	53, 366, 367, 600, 746, 1652
NmeAIII	GCCGAG	1 cut(s)	205
NmuCI	GTSAC	1 cut(s)	139
PaeR7I	CTCGAG	1 cut(s)	581
PagI	TCATGA	2 cut(s)	1071, 1455
PaqCI	CACCTGC	1 cut(s)	528
PasI	CCCWGGG	1 cut(s)	1435
PciSI	GCTCTTC	2 cut(s)	121, 681
PcsI	WCGNNNNNNNCGW	1 cut(s)	246
PctI	GAATGC	1 cut(s)	1227
PdiI	GCCGGC	1 cut(s)	427
PdmI	GAANNNNTTC	1 cut(s)	1729
PfeI	GAWTC	1 cut(s)	776
Pfl23II	CGTACG	1 cut(s)	207
PflFI	GACNNNGTC	1 cut(s)	766
PflMI	CCANNNNNTGG	1 cut(s)	1375
PkrI	GCNGC	9 cut(s)	223, 274, 277, 280, 298, 374, 668, 1690, 1823
PleI	GAGTC	1 cut(s)	181
PpsI	GAGTC	1 cut(s)	181
Ppu21I	YACGTR	1 cut(s)	712
PpuMI	RGGWCCY	2 cut(s)	154, 598
PsiI	TTATAA	1 cut(s)	1259
Psp5II	RGGWCCY	2 cut(s)	154, 598
Psp6I	CCWGG	3 cut(s)	1434, 1735, 1835
PspGI	CCWGG	3 cut(s)	1434, 1735, 1835
PspLI	CGTACG	1 cut(s)	207
PspN4I	GGNNCC	6 cut(s)	53, 366, 367, 600, 746, 1652
PspOMI	GGGCCC	1 cut(s)	364
PspPPI	RGGWCCY	2 cut(s)	154, 598
PsuI	RGATCY	2 cut(s)	577, 1126
PsyI	GACNNNGTC	1 cut(s)	766
RsaI	GTAC	3 cut(s)	209, 1316, 1494
RsaNI	GTAC	3 cut(s)	208, 1315, 1493
RseI	CAYNNNNRTG	1 cut(s)	1017
SapI	GCTCTTC	2 cut(s)	121, 681
SatI	GCNGC	9 cut(s)	222, 273, 276, 279, 297, 373, 667, 1689, 1822
Sau3AI	GATC	3 cut(s)	577, 1126, 1452
ScaI	AGTACT	1 cut(s)	1316
SchI	GAGTC	1 cut(s)	182
ScrFI	CCNGG	9 cut(s)	195, 353, 354, 363, 1436, 1446, 1737, 1752, 1837
SduI	GDGCHC	5 cut(s)	309, 368, 1208, 1273, 1363
SexAI	ACCWGGT	1 cut(s)	1735
SfaNI	GCATC	6 cut(s)	312, 614, 991, 1369, 1420, 1598
Sfr274I	CTCGAG	1 cut(s)	581
SinI	GGWCC	8 cut(s)	154, 441, 598, 762, 841, 944, 1102, 1762
SlaI	CTCGAG	1 cut(s)	581
SmaI	CCCGGG	1 cut(s)	354
SmiMI	CAYNNNNRTG	1 cut(s)	1017
SmlI	CTYRAG	2 cut(s)	581, 1757
SmoI	CTYRAG	2 cut(s)	581, 1757
SnaBI	TACGTA	1 cut(s)	712
SsiI	CCGC	9 cut(s)	55, 112, 222, 272, 278, 327, 370, 739, 1100
SspMI	CTAG	6 cut(s)	405, 756, 966, 992, 1005, 1320
StyD4I	CCNGG	9 cut(s)	193, 351, 352, 361, 1434, 1444, 1735, 1750, 1835
StyI	CCWWGG	1 cut(s)	1698
TaaI	ACNGT	3 cut(s)	379, 393, 766
TaiI	ACGT	4 cut(s)	209, 476, 714, 1285
TatI	WGTACW	1 cut(s)	1314
TauI	GCSGC	3 cut(s)	224, 275, 281
TfiI	GAWTC	1 cut(s)	776
TscAI	CASTG	2 cut(s)	691, 1672
TseFI	GTSAC	1 cut(s)	139
TseI	GCWGC	6 cut(s)	275, 296, 372, 666, 1688, 1821
Tsp45I	GTSAC	1 cut(s)	139
TspDTI	ATGAA	4 cut(s)	612, 645, 948, 1590
TspGWI	ACGGA	3 cut(s)	300, 575, 649
TspMI	CCCGGG	1 cut(s)	352
TspRI	CASTG	2 cut(s)	691, 1672
Tth111I	GACNNNGTC	1 cut(s)	766
Van91I	CCANNNNNTGG	1 cut(s)	1375
Vha464I	CTTAAG	1 cut(s)	1757
VneI	GTGCAC	1 cut(s)	1359
VpaK11BI	GGWCC	8 cut(s)	154, 441, 598, 762, 841, 944, 1102, 1762
XapI	RAATTY	3 cut(s)	251, 1025, 1248
XbaI	TCTAGA	1 cut(s)	1319
XhoI	CTCGAG	1 cut(s)	581
XmaI	CCCGGG	1 cut(s)	352
XmnI	GAANNNNTTC	1 cut(s)	1729
XspI	CTAG	6 cut(s)	405, 756, 966, 992, 1005, 1320
ZrmI	AGTACT	1 cut(s)	1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.