AT1G32190

Alpha beta hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011765
Physical Location & Seq
Reverse (-)
11592927 .. 11596056
3130 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G32190.1

Sequence Viewer

Length: 1269 bp
ATGGGGTGCATGTTCTCTCACCTCGCCGCCAAATTCGCCTTCTTCCCACCCTCTCCTCCCACTTACCACCTCACCAAAACCCCCGACGGCAAACTCTCCGCCGTATCCTCCGCTTCCTCCTCCTCCTCCACTTTTCCCTCCGCCGGAGACCCATCTCTCGACGTCAAAGTAGTAAAGACAAGACGCGGCAACAAAGTCACAGCTTTTTACCTTAGAAACCCTAACGCAAGACTCACACTTCTCTACTCTCATGGAAATGCTGCAGATTTGGGACAACTCTTCGATCTCTTTGTTCAACTCAAAGTCAATCTCCGAGTCAATCTCATGGGGTATGATTATTCAGGCTATGGAGCTTCTACTGGTAAGCCGAGTGAGTACGATACATATGCAGATATAGAGGCGGCGTATGAGTGTTTGCAGACGGATTATGGGGTAGGGCAAGAAGATTTGATCTTGTATGGTCAATCTGTTGGCAGCGGTCCAACGCTGCACCTTGCCTCTAAGCTTCCACGGCTTAGAGGTGTCGTTCTTCATAGCGGCATTCTCTCTGGTCTTCGTGTTCTATGTCATGTCAAGTTCAAGTTTTGTTGTGACATTTATTCGAACGTAAACAAGATCAAGAAGGTGAAATGCCCGGTTCTTGTCATACACGGAACAGAGGATGATGTGGTGAATTGGTTACACGGAAACAGGCTTTGGAAAATGGCAAAGGAACCGTATGAACCGCTCTGGATTAAAGGCGGTGGACATTGCAACCTTGAGATATATCCGGACTACATTAGACACCTATACCGGTTTATACAAGACATGGAAAATACAACCACTAAGTCTCGTCTCAAAACGATTTGGCAAGAAATCCGTCGGCGAGATGAATCCACAGGATGTTGTTGTTCCGGACTGTGCAGACCTAGCTGCAGTTGTCCCAAACCTCGGTGTCCCAAACCTAGTTGCAGTTGCGGCTGCGGTTGTGGCGACTGCGGTTGTTTCAAGTGTTCGTGTCCGACTTTGAAGGGATGTTTCTCTTGCTGCAAGAAACCGAGCTGTGTTAGTAGTTGTTGCTGTCCCACGTTCAAATGCAGCAGCTGCTTTGGGAAGCCAAAATGTCCGAAATGCTCTTGTTGGAAATGTCTAAAATGCCCCGACACCGAGTGTTGCCGGAGTAGTTGTTGTTGTTCCGGTTGTTTTAGCTGGTTGTGTTGCTGCGGTGGAGGGAGGAGGAAAGAGGGGGAGAGGAGAGGATCTACTACGTTGGAGAAGAGTGAAGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DLH Hydrolase_4

Protein Analysis

422

Amino Acids

46.39

Weight (kDa)

8.82

Isoelectric Point (pI)

54.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 76 - 182 5.4e-06 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011765)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32190 AT1G32190
fragaria_vesca FvH4_5g23110 FvH4_5g23110
malus_domestica MD06G1038600.v1.1 MD16G1270400.v1.1
prunus_persica Prupe.5G027400_v2.0.a1 Prupe.5G027400_v2.0.a1
pyrus_communis pycom06g03240
rosa_chinensis RchiOBHm_Chr7g0211991
rosa_laevigata RLG00000002947
rosa_multiflora Rmu_sc0004869.1_g000006
rosa_roxburghii Rroxscaffold_3G00247220
rosa_rugosa Rorug07G0129900
rosa_samantha Rh7AG262700 Rh7BG256800 Rh7CG279300 Rh7DG269500
rosa_wichuraiana Rw7G022420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 165
AccBSI CCGCTC 1 cut(s) 727
AccII CGCG 1 cut(s) 186
AccIII TCCGGA 2 cut(s) 769, 893
AclWI GGATC 1 cut(s) 1246
AcsI RAATTY 1 cut(s) 32
AcyI GRCGYC 1 cut(s) 162
AdeI CACNNNGTG 1 cut(s) 1149
AfaI GTAC 1 cut(s) 377
AfiI CCNNNNNNNGG 2 cut(s) 143, 930
AgeI ACCGGT 1 cut(s) 792
AgsI TTSAA 5 cut(s) 296, 580, 988, 1009, 1072
AjuI GAANNNNNNNTTGG 4 cut(s) 23, 55, 679, 711
AluBI AGCT 7 cut(s) 203, 353, 505, 912, 1041, 1083, 1188
AluI AGCT 7 cut(s) 203, 353, 505, 912, 1041, 1083, 1188
Alw26I GTCTC 3 cut(s) 141, 834, 839
AlwI GGATC 1 cut(s) 1246
AlwNI CAGNNNCTG 1 cut(s) 1083
Aor13HI TCCGGA 2 cut(s) 769, 893
ApoI RAATTY 1 cut(s) 32
AsiGI ACCGGT 1 cut(s) 792
AspS9I GGNCC 1 cut(s) 479
AsuC2I CCSGG 1 cut(s) 635
AsuHPI GGTGA 4 cut(s) 11, 64, 637, 682
AsuII TTCGAA 1 cut(s) 602
AvaII GGWCC 1 cut(s) 479
BbsI GAAGAC 1 cut(s) 545
BccI CCATC 1 cut(s) 160
BceAI ACGGC 3 cut(s) 86, 103, 527
BcgI CGANNNNNNTGC 2 cut(s) 368, 402
BciVI GTATCC 1 cut(s) 115
BcnI CCSGG 1 cut(s) 635
BcoDI GTCTC 3 cut(s) 141, 834, 839
BfaI CTAG 2 cut(s) 909, 945
BfmI CTRYAG 2 cut(s) 261, 913
BfuI GTATCC 1 cut(s) 115
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 1 cut(s) 479
BmgT120I GGNCC 1 cut(s) 479
BmiI GGNNCC 1 cut(s) 714
BmrFI CCNGG 1 cut(s) 635
BpiI GAAGAC 1 cut(s) 545
BplI GAGNNNNNCTC 2 cut(s) 306, 338
Bpu14I TTCGAA 1 cut(s) 602
BpuEI CTTGAG 1 cut(s) 779
BpuMI CCSGG 1 cut(s) 635
BsaHI GRCGYC 1 cut(s) 162
BsaI GGTCTC 1 cut(s) 141
BsaJI CCNNGG 2 cut(s) 509, 929
BsaWI WCCGGW 4 cut(s) 769, 792, 893, 1175
BsaXI ACNNNNNCTCC 2 cut(s) 1150, 1180
Bsc4I CCNNNNNNNGG 2 cut(s) 143, 930
Bse118I RCCGGY 1 cut(s) 792
Bse1I ACTGG 1 cut(s) 364
Bse3DI GCAATG 1 cut(s) 748
BseAI TCCGGA 2 cut(s) 769, 893
BseDI CCNNGG 2 cut(s) 509, 929
BseGI GGATG 3 cut(s) 667, 887, 1019
BseLI CCNNNNNNNGG 2 cut(s) 143, 930
BseMI GCAATG 1 cut(s) 748
BseNI ACTGG 1 cut(s) 364
BseRI GAGGAG 6 cut(s) 45, 109, 112, 115, 1228, 1246
BsgI GTGCAG 2 cut(s) 473, 922
Bsh1236I CGCG 1 cut(s) 186
BshTI ACCGGT 1 cut(s) 792
BsiSI CCGG 7 cut(s) 144, 635, 770, 793, 894, 1156, 1176
BslFI GGGAC 4 cut(s) 285, 906, 921, 1047
BslI CCNNNNNNNGG 2 cut(s) 143, 930
BsmAI GTCTC 3 cut(s) 141, 834, 839
BsmBI CGTCTC 1 cut(s) 839
BsmFI GGGAC 4 cut(s) 285, 906, 921, 1047
BsmI GAATGC 1 cut(s) 540
Bso31I GGTCTC 1 cut(s) 141
Bsp119I TTCGAA 1 cut(s) 602
Bsp13I TCCGGA 2 cut(s) 769, 893
Bsp143I GATC 4 cut(s) 283, 450, 615, 1238
BspEI TCCGGA 2 cut(s) 769, 893
BspFNI CGCG 1 cut(s) 186
BspLI GGNNCC 1 cut(s) 714
BspMAI CTGCAG 2 cut(s) 265, 917
BspPI GGATC 1 cut(s) 1246
BspT104I TTCGAA 1 cut(s) 602
BspTNI GGTCTC 1 cut(s) 141
BsrBI CCGCTC 1 cut(s) 727
BsrDI GCAATG 1 cut(s) 748
BsrFI RCCGGY 1 cut(s) 792
BsrI ACTGG 1 cut(s) 364
BssAI RCCGGY 1 cut(s) 792
BssECI CCNNGG 2 cut(s) 509, 929
BssMI GATC 4 cut(s) 283, 450, 615, 1238
BssNI GRCGYC 1 cut(s) 162
Bst4CI ACNGT 2 cut(s) 717, 900
Bst6I CTCTTC 2 cut(s) 284, 1250
BstACI GRCGYC 1 cut(s) 162
BstAPI GCANNNNNTGC 1 cut(s) 1083
BstBI TTCGAA 1 cut(s) 602
BstDEI CTNAG 4 cut(s) 212, 501, 515, 825
BstDSI CCRYGG 1 cut(s) 509
BstF5I GGATG 3 cut(s) 667, 887, 1019
BstFNI CGCG 1 cut(s) 186
BstKTI GATC 4 cut(s) 286, 453, 618, 1241
BstMAI GTCTC 3 cut(s) 141, 834, 839
BstMBI GATC 4 cut(s) 283, 450, 615, 1238
BstMWI GCNNNNNNNGC 6 cut(s) 35, 511, 909, 957, 969, 1083
BstNSI RCATGY 1 cut(s) 13
BstSCI CCNGG 1 cut(s) 633
BstSFI CTRYAG 2 cut(s) 261, 913
BstUI CGCG 1 cut(s) 186
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 1 cut(s) 1238
BstYI RGATCY 1 cut(s) 1238
BsuI GTATCC 1 cut(s) 115
BtgI CCRYGG 1 cut(s) 509
BtsCI GGATG 3 cut(s) 667, 887, 1019
CaiI CAGNNNCTG 1 cut(s) 1083
Cfr10I RCCGGY 1 cut(s) 792
Cfr13I GGNCC 1 cut(s) 479
CseI GACGC 1 cut(s) 192
Csp6I GTAC 1 cut(s) 376
CspAI ACCGGT 1 cut(s) 792
CviAII CATG 5 cut(s) 10, 251, 325, 569, 808
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 4 cut(s) 212, 501, 515, 825
DpnI GATC 4 cut(s) 285, 452, 617, 1240
DpnII GATC 4 cut(s) 283, 450, 615, 1238
DraIII CACNNNGTG 1 cut(s) 1149
Eam1104I CTCTTC 2 cut(s) 284, 1250
EarI CTCTTC 2 cut(s) 284, 1250
EciI GGCGGA 2 cut(s) 88, 130
Eco31I GGTCTC 1 cut(s) 141
Eco47I GGWCC 1 cut(s) 479
Esp3I CGTCTC 1 cut(s) 839
FaeI CATG 5 cut(s) 13, 254, 328, 572, 811
FaqI GGGAC 4 cut(s) 285, 906, 921, 1047
FatI CATG 5 cut(s) 9, 250, 324, 568, 807
FauNDI CATATG 1 cut(s) 385
FokI GGATG 3 cut(s) 674, 894, 1026
FspBI CTAG 2 cut(s) 909, 945
HapII CCGG 7 cut(s) 144, 635, 770, 793, 894, 1156, 1176
HgaI GACGC 1 cut(s) 192
Hin1I GRCGYC 1 cut(s) 162
Hin1II CATG 5 cut(s) 13, 254, 328, 572, 811
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 3 cut(s) 231, 315, 872
HpaII CCGG 7 cut(s) 144, 635, 770, 793, 894, 1156, 1176
HphI GGTGA 4 cut(s) 11, 64, 637, 682
Hpy166II GTNNAC 2 cut(s) 610, 746
Hpy188I TCNGA 3 cut(s) 314, 1002, 1107
Hpy188III TCNNGA 5 cut(s) 158, 619, 730, 770, 894
Hpy8I GTNNAC 2 cut(s) 610, 746
Hpy99I CGWCG 3 cut(s) 89, 164, 864
HpyAV CCTTC 4 cut(s) 49, 616, 1003, 1256
HpyCH4III ACNGT 2 cut(s) 717, 900
HpyCH4IV ACGT 4 cut(s) 162, 606, 1067, 1247
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 511, 909, 957, 969, 1083
HpyF3I CTNAG 4 cut(s) 212, 501, 515, 825
HpySE526I ACGT 4 cut(s) 162, 606, 1067, 1247
Hsp92I GRCGYC 1 cut(s) 162
Hsp92II CATG 5 cut(s) 13, 254, 328, 572, 811
Kpn2I TCCGGA 2 cut(s) 769, 893
Kzo9I GATC 4 cut(s) 283, 450, 615, 1238
LmnI GCTCC 1 cut(s) 350
MaeI CTAG 2 cut(s) 909, 945
MaeII ACGT 4 cut(s) 162, 606, 1067, 1247
MaeIII GTNAC 3 cut(s) 196, 590, 678
MalI GATC 4 cut(s) 285, 452, 617, 1240
MbiI CCGCTC 1 cut(s) 727
MboI GATC 4 cut(s) 283, 450, 615, 1238
MboII GAAGA 6 cut(s) 34, 271, 455, 521, 545, 1267
MflI RGATCY 1 cut(s) 1238
MluCI AATT 2 cut(s) 32, 673
MlyI GAGTC 2 cut(s) 225, 324
MmeI TCCRAC 4 cut(s) 506, 1025, 1100, 1230
MroI TCCGGA 2 cut(s) 769, 893
MseI TTAA 1 cut(s) 735
MslI CAYNNNNRTG 1 cut(s) 255
MspA1I CMGCKG 2 cut(s) 477, 1083
MspI CCGG 7 cut(s) 144, 635, 770, 793, 894, 1156, 1176
MspR9I CCNGG 1 cut(s) 635
Mva1269I GAATGC 1 cut(s) 540
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 6 cut(s) 35, 511, 909, 957, 969, 1083
NciI CCSGG 1 cut(s) 635
NdeI CATATG 1 cut(s) 385
NdeII GATC 4 cut(s) 283, 450, 615, 1238
NlaIII CATG 5 cut(s) 13, 254, 328, 572, 811
NlaIV GGNNCC 1 cut(s) 714
NmeAIII GCCGAG 1 cut(s) 393
NmuCI GTSAC 2 cut(s) 196, 590
NspI RCATGY 1 cut(s) 13
NspV TTCGAA 1 cut(s) 602
PctI GAATGC 1 cut(s) 540
PfeI GAWTC 1 cut(s) 872
PinAI ACCGGT 1 cut(s) 792
PleI GAGTC 2 cut(s) 225, 323
PpsI GAGTC 2 cut(s) 225, 323
PspN4I GGNNCC 1 cut(s) 714
PspPI GGNCC 1 cut(s) 479
PstI CTGCAG 2 cut(s) 265, 917
PstNI CAGNNNCTG 1 cut(s) 1083
PsuI RGATCY 1 cut(s) 1238
PvuII CAGCTG 1 cut(s) 1083
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
RseI CAYNNNNRTG 1 cut(s) 255
SaqAI TTAA 1 cut(s) 735
Sau3AI GATC 4 cut(s) 283, 450, 615, 1238
Sau96I GGNCC 1 cut(s) 479
SchI GAGTC 2 cut(s) 225, 324
ScrFI CCNGG 1 cut(s) 635
SfcI CTRYAG 2 cut(s) 261, 913
SfuI TTCGAA 1 cut(s) 602
SinI GGWCC 1 cut(s) 479
SmiMI CAYNNNNRTG 1 cut(s) 255
SmlI CTYRAG 1 cut(s) 758
SmoI CTYRAG 1 cut(s) 758
Sse9I AATT 2 cut(s) 32, 673
SspMI CTAG 2 cut(s) 909, 945
StyD4I CCNGG 1 cut(s) 633
TaaI ACNGT 2 cut(s) 717, 900
TaiI ACGT 4 cut(s) 165, 609, 1070, 1250
TaqI TCGA 3 cut(s) 159, 282, 602
TasI AATT 2 cut(s) 32, 673
TauI GCSGC 5 cut(s) 29, 189, 404, 540, 960
TfiI GAWTC 1 cut(s) 872
Tru1I TTAA 1 cut(s) 735
Tru9I TTAA 1 cut(s) 735
TseFI GTSAC 2 cut(s) 196, 590
Tsp45I GTSAC 2 cut(s) 196, 590
TspDTI ATGAA 3 cut(s) 521, 735, 885
TspGWI ACGGA 4 cut(s) 437, 666, 699, 848
VpaK11BI GGWCC 1 cut(s) 479
XapI RAATTY 1 cut(s) 32
XceI RCATGY 1 cut(s) 13
XspI CTAG 2 cut(s) 909, 945
ZraI GACGTC 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.