domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32190 AT1G32190 |
| fragaria_vesca | FvH4_5g23110 FvH4_5g23110 |
| malus_domestica | MD06G1038600.v1.1 MD16G1270400.v1.1 |
| prunus_persica | Prupe.5G027400_v2.0.a1 Prupe.5G027400_v2.0.a1 |
| pyrus_communis | pycom06g03240 |
| rosa_chinensis | RchiOBHm_Chr7g0211991 |
| rosa_laevigata | RLG00000002947 |
| rosa_multiflora | Rmu_sc0004869.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00247220 |
| rosa_rugosa | Rorug07G0129900 |
| rosa_samantha | Rh7AG262700 Rh7BG256800 Rh7CG279300 Rh7DG269500 |
| rosa_wichuraiana | Rw7G022420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 606 |
| AccII | CGCG | 1 cut(s) | 192 |
| AciI | CCGC | 3 cut(s) | 114, 192, 787 |
| AclWI | GGATC | 4 cut(s) | 64, 713, 722, 726 |
| AcsI | RAATTY | 2 cut(s) | 581, 621 |
| AfaI | GTAC | 1 cut(s) | 661 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 79, 307, 818, 842 |
| AflII | CTTAAG | 1 cut(s) | 305 |
| AjiI | CACGTC | 1 cut(s) | 129 |
| AjnI | CCWGG | 1 cut(s) | 444 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 23, 55 |
| AluBI | AGCT | 7 cut(s) | 97, 304, 769, 986, 1010, 1034, 1406 |
| AluI | AGCT | 7 cut(s) | 97, 304, 769, 986, 1010, 1034, 1406 |
| Alw21I | GWGCWC | 1 cut(s) | 17 |
| Alw26I | GTCTC | 2 cut(s) | 242, 419 |
| AlwI | GGATC | 4 cut(s) | 64, 713, 722, 726 |
| AoxI | GGCC | 1 cut(s) | 556 |
| ApoI | RAATTY | 2 cut(s) | 581, 621 |
| AspS9I | GGNCC | 1 cut(s) | 485 |
| AsuC2I | CCSGG | 1 cut(s) | 80 |
| AvaII | GGWCC | 1 cut(s) | 485 |
| BaeGI | GKGCMC | 2 cut(s) | 641, 756 |
| BamHI | GGATCC | 1 cut(s) | 718 |
| Bbv12I | GWGCWC | 1 cut(s) | 17 |
| BccI | CCATC | 2 cut(s) | 58, 798 |
| BceAI | ACGGC | 1 cut(s) | 106 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 187, 221 |
| BciT130I | CCWGG | 1 cut(s) | 446 |
| BciVI | GTATCC | 1 cut(s) | 329 |
| BcnI | CCSGG | 1 cut(s) | 80 |
| BcoDI | GTCTC | 2 cut(s) | 242, 419 |
| BfaI | CTAG | 4 cut(s) | 647, 983, 1007, 1031 |
| BfrI | CTTAAG | 1 cut(s) | 305 |
| BfuI | GTATCC | 1 cut(s) | 329 |
| BlpI | GCTNAGC | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 2 cut(s) | 80, 446 |
| Bme18I | GGWCC | 1 cut(s) | 485 |
| BmgBI | CACGTC | 1 cut(s) | 129 |
| BmgT120I | GGNCC | 1 cut(s) | 485 |
| BmiI | GGNNCC | 2 cut(s) | 358, 720 |
| BmrFI | CCNGG | 2 cut(s) | 80, 446 |
| BmsI | GCATC | 1 cut(s) | 512 |
| BoxI | GACNNNNGTC | 1 cut(s) | 276 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 98 |
| BpuEI | CTTGAG | 1 cut(s) | 443 |
| BpuMI | CCSGG | 1 cut(s) | 80 |
| BsaI | GGTCTC | 1 cut(s) | 419 |
| BsaJI | CCNNGG | 2 cut(s) | 21, 274 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 143, 173, 477, 507 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 79, 307, 818, 842 |
| Bse1I | ACTGG | 1 cut(s) | 370 |
| Bse3DI | GCAATG | 2 cut(s) | 268, 700 |
| BseBI | CCWGG | 1 cut(s) | 446 |
| BseDI | CCNNGG | 2 cut(s) | 21, 274 |
| BseGI | GGATG | 1 cut(s) | 783 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 79, 307, 818, 842 |
| BseMI | GCAATG | 2 cut(s) | 268, 700 |
| BseMII | CTCAG | 3 cut(s) | 112, 232, 331 |
| BseNI | ACTGG | 1 cut(s) | 370 |
| BseSI | GKGCMC | 2 cut(s) | 641, 756 |
| BsgI | GTGCAG | 4 cut(s) | 521, 876, 1116, 1164 |
| Bsh1236I | CGCG | 1 cut(s) | 192 |
| BshFI | GGCC | 1 cut(s) | 558 |
| BsiHKAI | GWGCWC | 1 cut(s) | 17 |
| BsiSI | CCGG | 2 cut(s) | 79, 555 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 79, 307, 818, 842 |
| BsmAI | GTCTC | 2 cut(s) | 242, 419 |
| BsmBI | CGTCTC | 1 cut(s) | 242 |
| BsnI | GGCC | 1 cut(s) | 558 |
| Bso31I | GGTCTC | 1 cut(s) | 419 |
| Bsp1286I | GDGCHC | 3 cut(s) | 17, 641, 756 |
| Bsp143I | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 98 |
| BspACI | CCGC | 3 cut(s) | 114, 192, 787 |
| BspANI | GGCC | 1 cut(s) | 558 |
| BspCNI | CTCAG | 3 cut(s) | 111, 231, 330 |
| BspFNI | CGCG | 1 cut(s) | 192 |
| BspLI | GGNNCC | 2 cut(s) | 358, 720 |
| BspPI | GGATC | 4 cut(s) | 64, 713, 722, 726 |
| BspTI | CTTAAG | 1 cut(s) | 305 |
| BspTNI | GGTCTC | 1 cut(s) | 419 |
| BsrDI | GCAATG | 2 cut(s) | 268, 700 |
| BsrI | ACTGG | 1 cut(s) | 370 |
| BssECI | CCNNGG | 2 cut(s) | 21, 274 |
| BssMI | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| BssT1I | CCWWGG | 2 cut(s) | 21, 274 |
| Bst2UI | CCWGG | 1 cut(s) | 446 |
| Bst4CI | ACNGT | 1 cut(s) | 542 |
| BstAFI | CTTAAG | 1 cut(s) | 305 |
| BstDEI | CTNAG | 4 cut(s) | 98, 218, 317, 521 |
| BstF5I | GGATG | 1 cut(s) | 783 |
| BstFNI | CGCG | 1 cut(s) | 192 |
| BstKTI | GATC | 5 cut(s) | 72, 292, 459, 721, 730 |
| BstMAI | GTCTC | 2 cut(s) | 242, 419 |
| BstMBI | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| BstNI | CCWGG | 1 cut(s) | 446 |
| BstNSI | RCATGY | 3 cut(s) | 13, 1361, 1385 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 276 |
| BstSCI | CCNGG | 2 cut(s) | 78, 444 |
| BstSLI | GKGCMC | 2 cut(s) | 641, 756 |
| BstUI | CGCG | 1 cut(s) | 192 |
| BstX2I | RGATCY | 2 cut(s) | 69, 718 |
| BstYI | RGATCY | 2 cut(s) | 69, 718 |
| BsuI | GTATCC | 1 cut(s) | 329 |
| BsuRI | GGCC | 1 cut(s) | 558 |
| BtrI | CACGTC | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 783 |
| BtsI | GCAGTG | 1 cut(s) | 754 |
| BtsIMutI | CAGTG | 2 cut(s) | 547, 754 |
| Cfr13I | GGNCC | 1 cut(s) | 485 |
| CseI | GACGC | 1 cut(s) | 91 |
| Csp6I | GTAC | 1 cut(s) | 660 |
| CviAII | CATG | 9 cut(s) | 10, 257, 575, 656, 689, 815, 839, 1358, 1382 |
| CviQI | GTAC | 1 cut(s) | 660 |
| DdeI | CTNAG | 4 cut(s) | 98, 218, 317, 521 |
| DpnI | GATC | 5 cut(s) | 71, 291, 458, 720, 729 |
| DpnII | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| EciI | GGCGGA | 2 cut(s) | 103, 776 |
| Eco130I | CCWWGG | 2 cut(s) | 21, 274 |
| Eco31I | GGTCTC | 1 cut(s) | 419 |
| Eco47I | GGWCC | 1 cut(s) | 485 |
| EcoRII | CCWGG | 1 cut(s) | 444 |
| EcoT14I | CCWWGG | 2 cut(s) | 21, 274 |
| ErhI | CCWWGG | 2 cut(s) | 21, 274 |
| Esp3I | CGTCTC | 1 cut(s) | 242 |
| FaeI | CATG | 9 cut(s) | 13, 260, 578, 659, 692, 818, 842, 1361, 1385 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 23, 55 |
| FatI | CATG | 9 cut(s) | 9, 256, 574, 655, 688, 814, 838, 1357, 1381 |
| FauNDI | CATATG | 2 cut(s) | 229, 391 |
| FokI | GGATG | 1 cut(s) | 770 |
| FspBI | CTAG | 4 cut(s) | 647, 983, 1007, 1031 |
| HaeIII | GGCC | 1 cut(s) | 558 |
| HapII | CCGG | 2 cut(s) | 79, 555 |
| HgaI | GACGC | 1 cut(s) | 91 |
| Hin1II | CATG | 9 cut(s) | 13, 260, 578, 659, 692, 818, 842, 1361, 1385 |
| HincII | GTYRAC | 1 cut(s) | 281 |
| HindII | GTYRAC | 1 cut(s) | 281 |
| HpaII | CCGG | 2 cut(s) | 79, 555 |
| Hpy166II | GTNNAC | 2 cut(s) | 281, 485 |
| Hpy188I | TCNGA | 2 cut(s) | 221, 627 |
| Hpy8I | GTNNAC | 2 cut(s) | 281, 485 |
| Hpy99I | CGWCG | 5 cut(s) | 92, 107, 133, 155, 170 |
| HpyAV | CCTTC | 2 cut(s) | 49, 569 |
| HpyCH4III | ACNGT | 1 cut(s) | 542 |
| HpyCH4IV | ACGT | 2 cut(s) | 128, 168 |
| HpyF3I | CTNAG | 4 cut(s) | 98, 218, 317, 521 |
| HpySE526I | ACGT | 2 cut(s) | 128, 168 |
| Hsp92II | CATG | 9 cut(s) | 13, 260, 578, 659, 692, 818, 842, 1361, 1385 |
| Kzo9I | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| LweI | GCATC | 1 cut(s) | 512 |
| MaeI | CTAG | 4 cut(s) | 647, 983, 1007, 1031 |
| MaeII | ACGT | 2 cut(s) | 128, 168 |
| MaeIII | GTNAC | 1 cut(s) | 684 |
| MalI | GATC | 5 cut(s) | 71, 291, 458, 720, 729 |
| MboI | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| MboII | GAAGA | 3 cut(s) | 34, 461, 677 |
| MflI | RGATCY | 2 cut(s) | 69, 718 |
| MhlI | GDGCHC | 3 cut(s) | 17, 641, 756 |
| MluCI | AATT | 4 cut(s) | 546, 581, 621, 679 |
| MmeI | TCCRAC | 1 cut(s) | 457 |
| MseI | TTAA | 2 cut(s) | 306, 741 |
| MslI | CAYNNNNRTG | 2 cut(s) | 261, 693 |
| MspCI | CTTAAG | 1 cut(s) | 305 |
| MspI | CCGG | 2 cut(s) | 79, 555 |
| MspR9I | CCNGG | 2 cut(s) | 80, 446 |
| MvaI | CCWGG | 1 cut(s) | 446 |
| MvnI | CGCG | 1 cut(s) | 192 |
| NciI | CCSGG | 1 cut(s) | 80 |
| NdeI | CATATG | 2 cut(s) | 229, 391 |
| NdeII | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| NlaIII | CATG | 9 cut(s) | 13, 260, 578, 659, 692, 818, 842, 1361, 1385 |
| NlaIV | GGNNCC | 2 cut(s) | 358, 720 |
| NspI | RCATGY | 3 cut(s) | 13, 1361, 1385 |
| PshAI | GACNNNNGTC | 1 cut(s) | 276 |
| PsiI | TTATAA | 1 cut(s) | 606 |
| Psp6I | CCWGG | 1 cut(s) | 444 |
| PspGI | CCWGG | 1 cut(s) | 444 |
| PspN4I | GGNNCC | 2 cut(s) | 358, 720 |
| PspPI | GGNCC | 1 cut(s) | 485 |
| PsuI | RGATCY | 2 cut(s) | 69, 718 |
| RsaI | GTAC | 1 cut(s) | 661 |
| RsaNI | GTAC | 1 cut(s) | 660 |
| RseI | CAYNNNNRTG | 2 cut(s) | 261, 693 |
| SaqAI | TTAA | 2 cut(s) | 306, 741 |
| Sau3AI | GATC | 5 cut(s) | 69, 289, 456, 718, 727 |
| Sau96I | GGNCC | 1 cut(s) | 485 |
| ScrFI | CCNGG | 2 cut(s) | 80, 446 |
| SduI | GDGCHC | 3 cut(s) | 17, 641, 756 |
| SfaNI | GCATC | 1 cut(s) | 512 |
| SinI | GGWCC | 1 cut(s) | 485 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 261, 693 |
| SmlI | CTYRAG | 2 cut(s) | 305, 422 |
| SmoI | CTYRAG | 2 cut(s) | 305, 422 |
| Sse9I | AATT | 4 cut(s) | 546, 581, 621, 679 |
| SsiI | CCGC | 3 cut(s) | 114, 192, 787 |
| SspMI | CTAG | 4 cut(s) | 647, 983, 1007, 1031 |
| StyD4I | CCNGG | 2 cut(s) | 78, 444 |
| StyI | CCWWGG | 2 cut(s) | 21, 274 |
| TaaI | ACNGT | 1 cut(s) | 542 |
| TaiI | ACGT | 2 cut(s) | 131, 171 |
| TaqI | TCGA | 1 cut(s) | 165 |
| TaqII | GACCGA | 1 cut(s) | 443 |
| TasI | AATT | 4 cut(s) | 546, 581, 621, 679 |
| TauI | GCSGC | 1 cut(s) | 195 |
| Tru1I | TTAA | 2 cut(s) | 306, 741 |
| Tru9I | TTAA | 2 cut(s) | 306, 741 |
| TscAI | CASTG | 2 cut(s) | 547, 761 |
| TspGWI | ACGGA | 1 cut(s) | 711 |
| TspRI | CASTG | 2 cut(s) | 547, 761 |
| Vha464I | CTTAAG | 1 cut(s) | 305 |
| VpaK11BI | GGWCC | 1 cut(s) | 485 |
| XapI | RAATTY | 2 cut(s) | 581, 621 |
| XceI | RCATGY | 3 cut(s) | 13, 1361, 1385 |
| XspI | CTAG | 4 cut(s) | 647, 983, 1007, 1031 |