Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008310

Physical Location & Seq

Genomic Coordinates Forward (+)

12091780 .. 12096486

Gene Structure 4707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G33360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGTCTGGACTTTGGAGATTGAGGAATCTAAAGTCTCTAGCTTTACATGCTCGTTCGATTTCACCTGTTTCCAATCTTTATTCTCTGGAATTAGGATCATGCCCTCGTCGTCGTATTCAAGAACGATTCAAATCGGAACAAGGCGGCGGAGGAGGAGGAGGAGATGATTTTCCGGTTCCGGTGACTCGTCGGAAGTTAAGAGCAGAGCCGAATTGTCCTCGTTGCTCAAAGCAAATGGATCTTCTCTTCTCAAATCGTCAATTTCCATCTTCTAATCTTCTTCAACGTCCTGATGATTCTGATTCCTCCGGTGCCGGAGATAAAACGAACTTCCAGTCTGTTAATTTCTGTCCGACTTGTAAAACTGCTTATGGATTCAACCCTCGTGGTGTCTCTCCTCTTCAAGGGACATTCATTGAGATCGGTCGTGTTCAATCTCCAACCACTACTACCACCAATGCTACTACTTCCAAATCCACCAGGAAACAACAACAACATTCAAAGGATCCAAATCAAGGATTCAATTACAGGAACAAGCTTAGATCTTCCTTTTGGGATACACTTAGATCTTACGGTGCTGAGCCACCTGAGGATTGGTCTCCTCCTCCTCCTCATTCTCCTTTGAACTCTTCTCCTCCTAATACCATTCCTGTGAACGCTTCTCCTAGTGCCGTGGATACTTCTCCTTTACCTGATGCAGTTAATGACGTTAGTCGATGGGGTGGTGCTGGCCTTGGCAGAGACTTTCCTACTCCAAAGGAGATTTGTAAATGGCTTGACAAGTTCGTCATTGGCCAAAGCCGGGCTAAAAAGGTGCTCTCTGTCGCTGTGTATAATCATTACAAGAGAATTTATCATACCTCTATGAAGAAAGGGTCAGCAGCACAACCAATTGATGATGACGATAATGTAGAATTAGATAAGAGCAATGTTCTCTTGATGGGGCCTACTGGCTCTGGGAAGACATTACTCGCAAAGACTTTGGCGAGGCTTGTAAATGTTCCTTTTGTCATTGCTGATGCAACTACACTGACTCAGGCTGGTTATGTGGGTGACGATGTTGAATCAATCCTTCATAAGCTACTAACGGTCGCTGAGTTCAACGTGCAAGCAGCACAACAGGGAATAGTCTATATTGATGAAGTTGATAAGATAACTAAGAAGGCTGAGAGTTTAAACATTAGCCGGGATGTTTCTGGGGAAGGTGTTCAACAGGCACTTTTGAAATTACTGGAAGGCACTATTGTAAATGTTCCAGGGAAAGGTGCAAGAAAGCATCCGCGGGGTGACCATATACAGATAGACACAAAAGATATCCTATTTATCTGTGGAGGAGCATTTGTTGACCTTGAGAAGACCATTGTGGATAGACGACAAGACTCATCAATTGGTTTTGGAGCTCCTGTTCGTGCCAACATGGCTACCAGTGGAGTGACCAGTGGTGCAATAACTTCATCTTTGCTAGAATCGGTTGAGAGTGCCGATCTGACAGCATATGGCCTTATACCGGAGTTTGTAGGACGCTTTCCCATATTAGTTAGTTTGTCAGCTCTGACAGAGGACCAGCTCATTCGGGTGCTTGTAGAACCCAAAAATGCTCTTGGGAAACAGTACAAGAAACTATTTAGCATGAACAACGTAAAGCTGCATTTTACTGAGAAAGCGCTGGAGATAATATCCAAGCAAGCAATGGTGAAAAATACAGGTGCGAGGGGACTAAGAGCCTTACTTGAAAGCATTCTTACCGAAGCCATGTTTGAGATTCCAGATGATAAAAAGGGAGATGAAAGAATCGATGCGGTTATAGTAGATGAGGAATCAACAAGCTCAGAAGCGTCTCGTGGATGCACAGCAAAAATACTTAGAGGAGACGGTGCTTTCGAGCGTTACCTCAGCGAGAACAAGTCGAAAGATGCTACAGAACCAATGGTTGACGAAAGAGTAGGCTCGGCGAAAGCAATGAGATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004176 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006508 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0030163 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04112 map04112

Pfam Domains

Protein Families

AAA_2 ClpB_D2-small

Protein Analysis

656

Amino Acids

71.54

Weight (kDa)

8.85

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_2	PF07724	308 - 511	2.8e-29	AAA domain (Cdc48 subfamily)
AAA	PF00004	311 - 417	7.3e-15	ATPase family associated with various cellular activities (AAA)
ClpB_D2-small	PF10431	518 - 588	1.6e-08	C-terminal, D2-small domain, of ClpB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33360
fragaria_vesca	FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040
malus_domestica	MD00G1089200.v1.1
prunus_persica	Prupe.8G000600_v2.0.a1
pyrus_communis	pycom215g00140
rosa_chinensis	RchiOBHm_Chr6g0249331
rosa_laevigata	RLG00000015591
rosa_roxburghii	Rroxscaffold_7G00217860
rosa_rugosa	Rorug05G0490400 Rorug05G0490500.1
rosa_samantha	Rh6AG001200 Rh6BG009100 Rh6CG000300 Rh6DG000200
rosa_wichuraiana	Rw6G000180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	785
AccB1I	GGYRCC	1 cut(s)	311
AccII	CGCG	1 cut(s)	1282
AciI	CCGC	5 cut(s)	144, 147, 1280, 1282, 1799
AclWI	GGATC	4 cut(s)	103, 246, 500, 513
AcoI	YGGCCR	1 cut(s)	793
AcsI	RAATTY	1 cut(s)	849
AfaI	GTAC	1 cut(s)	1613
AfeI	AGCGCT	1 cut(s)	1665
AfiI	CCNNNNNNNGG	5 cut(s)	404, 515, 802, 1262, 1507
AjnI	CCWGG	2 cut(s)	479, 1255
AloI	GAACNNNNNNTCC	2 cut(s)	1389, 1421
AluBI	AGCT	8 cut(s)	41, 538, 1081, 1400, 1550, 1567, 1645, 1827
AluI	AGCT	8 cut(s)	41, 538, 1081, 1400, 1550, 1567, 1645, 1827
Alw21I	GWGCWC	2 cut(s)	819, 1402
Alw26I	GTCTC	6 cut(s)	39, 397, 603, 735, 1842, 1863
AlwI	GGATC	4 cut(s)	103, 246, 500, 513
Aor51HI	AGCGCT	1 cut(s)	1665
AoxI	GGCC	4 cut(s)	730, 793, 944, 1498
ApeKI	GCWGC	3 cut(s)	881, 1112, 1645
ApoI	RAATTY	1 cut(s)	849
ArsI	GACNNNNNNTTYG	4 cut(s)	320, 352, 1862, 1894
Asp700I	GAANNNNTTC	2 cut(s)	1206, 1737
AspLEI	GCGC	1 cut(s)	1666
AspS9I	GGNCC	2 cut(s)	944, 1561
AsuC2I	CCSGG	2 cut(s)	803, 1187
AsuHPI	GGTGA	5 cut(s)	54, 193, 1064, 1298, 1705
AvaII	GGWCC	1 cut(s)	1561
AxyI	CCTNAGG	1 cut(s)	588
BalI	TGGCCA	1 cut(s)	795
BamHI	GGATCC	1 cut(s)	505
BanI	GGYRCC	1 cut(s)	311
BanII	GRGCYC	1 cut(s)	1402
BauI	CACGAG	2 cut(s)	384, 1839
BbsI	GAAGAC	2 cut(s)	968, 1361
Bbv12I	GWGCWC	2 cut(s)	819, 1402
BbvCI	CCTCAGC	1 cut(s)	1892
BbvI	GCAGC	3 cut(s)	893, 1124, 1632
BccI	CCATC	3 cut(s)	274, 711, 934
BceAI	ACGGC	1 cut(s)	656
BciT130I	CCWGG	2 cut(s)	481, 1257
BciVI	GTATCC	2 cut(s)	550, 670
BcnI	CCSGG	2 cut(s)	803, 1187
BcoDI	GTCTC	6 cut(s)	39, 397, 603, 735, 1842, 1863
BfaI	CTAG	3 cut(s)	38, 666, 1463
BfmI	CTRYAG	1 cut(s)	1917
BfoI	RGCGCY	1 cut(s)	1667
BfuI	GTATCC	2 cut(s)	550, 670
BglI	GCCNNNNNGGC	1 cut(s)	1418
BglII	AGATCT	2 cut(s)	542, 566
BisI	GCNGC	4 cut(s)	145, 882, 1113, 1646
BlpI	GCTNAGC	1 cut(s)	579
BlsI	GCNGC	4 cut(s)	146, 883, 1114, 1647
Bme1390I	CCNGG	4 cut(s)	481, 803, 1187, 1257
Bme18I	GGWCC	1 cut(s)	1561
BmgT120I	GGNCC	2 cut(s)	944, 1561
BmiI	GGNNCC	4 cut(s)	177, 313, 507, 945
BmrFI	CCNGG	4 cut(s)	481, 803, 1187, 1257
BmsI	GCATC	6 cut(s)	685, 1009, 1285, 1786, 1835, 1903
BoxI	GACNNNNGTC	1 cut(s)	711
BpiI	GAAGAC	2 cut(s)	968, 1361
BpmI	CTGGAG	1 cut(s)	1688
Bpu10I	CCTNAGC	1 cut(s)	1892
Bpu1102I	GCTNAGC	1 cut(s)	579
BpuEI	CTTGAG	1 cut(s)	1370
BpuMI	CCSGG	2 cut(s)	803, 1187
Bsa29I	ATCGAT	1 cut(s)	1794
BsaBI	GATNNNNATC	2 cut(s)	130, 510
BsaI	GGTCTC	1 cut(s)	603
BsaJI	CCNNGG	4 cut(s)	672, 733, 1256, 1280
BsaWI	WCCGGW	4 cut(s)	172, 178, 308, 1507
BsaXI	ACNNNNNCTCC	4 cut(s)	1326, 1356, 1389, 1419
Bsc4I	CCNNNNNNNGG	5 cut(s)	404, 515, 802, 1262, 1507
Bse1I	ACTGG	5 cut(s)	334, 955, 1236, 1425, 1437
Bse21I	CCTNAGG	1 cut(s)	588
Bse3DI	GCAATG	4 cut(s)	934, 1011, 1695, 1965
Bse8I	GATNNNNATC	2 cut(s)	130, 510
BseBI	CCWGG	2 cut(s)	481, 1257
BseCI	ATCGAT	1 cut(s)	1794
BseDI	CCNNGG	4 cut(s)	672, 733, 1256, 1280
BseGI	GGATG	3 cut(s)	1195, 1276, 1850
BseJI	GATNNNNATC	2 cut(s)	130, 510
BseLI	CCNNNNNNNGG	5 cut(s)	404, 515, 802, 1262, 1507
BseMI	GCAATG	4 cut(s)	934, 1011, 1695, 1965
BseMII	CTCAG	8 cut(s)	570, 579, 1049, 1086, 1158, 1647, 1842, 1906
BseNI	ACTGG	5 cut(s)	334, 955, 1236, 1425, 1437
BseXI	GCAGC	3 cut(s)	893, 1124, 1632
Bsh1236I	CGCG	1 cut(s)	1282
Bsh1285I	CGRYCG	2 cut(s)	427, 1092
BshFI	GGCC	4 cut(s)	732, 795, 946, 1500
BshNI	GGYRCC	1 cut(s)	311
BshVI	ATCGAT	1 cut(s)	1794
BsiEI	CGRYCG	2 cut(s)	427, 1092
BsiHKAI	GWGCWC	2 cut(s)	819, 1402
BsiSI	CCGG	7 cut(s)	173, 179, 309, 315, 802, 1186, 1508
BslFI	GGGAC	2 cut(s)	421, 1728
BslI	CCNNNNNNNGG	5 cut(s)	404, 515, 802, 1262, 1507
BsmAI	GTCTC	6 cut(s)	39, 397, 603, 735, 1842, 1863
BsmBI	CGTCTC	2 cut(s)	1842, 1863
BsmFI	GGGAC	2 cut(s)	421, 1728
BsmI	GAATGC	1 cut(s)	1737
BsnI	GGCC	4 cut(s)	732, 795, 946, 1500
Bso31I	GGTCTC	1 cut(s)	603
Bsp1286I	GDGCHC	2 cut(s)	819, 1402
Bsp143I	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
Bsp1720I	GCTNAGC	1 cut(s)	579
BspACI	CCGC	5 cut(s)	144, 147, 1280, 1282, 1799
BspANI	GGCC	4 cut(s)	732, 795, 946, 1500
BspCNI	CTCAG	8 cut(s)	571, 580, 1048, 1087, 1159, 1648, 1841, 1905
BspDI	ATCGAT	1 cut(s)	1794
BspFNI	CGCG	1 cut(s)	1282
BspLI	GGNNCC	4 cut(s)	177, 313, 507, 945
BspPI	GGATC	4 cut(s)	103, 246, 500, 513
BspT107I	GGYRCC	1 cut(s)	311
BspTNI	GGTCTC	1 cut(s)	603
BsrDI	GCAATG	4 cut(s)	934, 1011, 1695, 1965
BsrI	ACTGG	5 cut(s)	334, 955, 1236, 1425, 1437
BssECI	CCNNGG	4 cut(s)	672, 733, 1256, 1280
BssMI	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
BssSI	CACGAG	2 cut(s)	384, 1839
BssT1I	CCWWGG	1 cut(s)	733
Bst2BI	CACGAG	2 cut(s)	384, 1839
Bst2UI	CCWGG	2 cut(s)	481, 1257
Bst4CI	ACNGT	4 cut(s)	575, 1090, 1611, 1874
Bst6I	CTCTTC	3 cut(s)	251, 405, 634
BstC8I	GCNNGC	3 cut(s)	730, 1110, 1686
BstDSI	CCRYGG	2 cut(s)	672, 1280
BstEII	GGTNACC	1 cut(s)	1286
BstENI	CCTNNNNNAGG	1 cut(s)	402
BstF5I	GGATG	3 cut(s)	1195, 1276, 1850
BstFNI	CGCG	1 cut(s)	1282
BstH2I	RGCGCY	1 cut(s)	1667
BstHHI	GCGC	1 cut(s)	1666
BstKTI	GATC	7 cut(s)	98, 241, 423, 508, 545, 569, 1486
BstMAI	GTCTC	6 cut(s)	39, 397, 603, 735, 1842, 1863
BstMBI	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
BstMCI	CGRYCG	2 cut(s)	427, 1092
BstMWI	GCNNNNNNNGC	2 cut(s)	47, 1418
BstNI	CCWGG	2 cut(s)	481, 1257
BstNSI	RCATGY	1 cut(s)	50
BstPAI	GACNNNNGTC	1 cut(s)	711
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	4 cut(s)	479, 801, 1185, 1255
BstSFI	CTRYAG	1 cut(s)	1917
BstUI	CGCG	1 cut(s)	1282
BstV1I	GCAGC	3 cut(s)	893, 1124, 1632
BstV2I	GAAGAC	2 cut(s)	968, 1361
BstX2I	RGATCY	4 cut(s)	238, 505, 542, 566
BstYI	RGATCY	4 cut(s)	238, 505, 542, 566
Bsu15I	ATCGAT	1 cut(s)	1794
Bsu36I	CCTNAGG	1 cut(s)	588
BsuI	GTATCC	2 cut(s)	550, 670
BsuRI	GGCC	4 cut(s)	732, 795, 946, 1500
BsuTUI	ATCGAT	1 cut(s)	1794
BtgI	CCRYGG	2 cut(s)	672, 1280
BtsCI	GGATG	3 cut(s)	1195, 1276, 1850
BtsIMutI	CAGTG	3 cut(s)	1028, 1432, 1444
Cac8I	GCNNGC	3 cut(s)	730, 1110, 1686
CfoI	GCGC	1 cut(s)	1666
Cfr13I	GGNCC	2 cut(s)	944, 1561
Cfr42I	CCGCGG	1 cut(s)	1283
ClaI	ATCGAT	1 cut(s)	1794
CseI	GACGC	2 cut(s)	1530, 1824
Csp6I	GTAC	1 cut(s)	1612
CspCI	CAANNNNNGTGG	2 cut(s)	367, 402
CviAII	CATG	5 cut(s)	47, 99, 1417, 1630, 1753
CviQI	GTAC	1 cut(s)	1612
DpnI	GATC	7 cut(s)	97, 240, 422, 507, 544, 568, 1485
DpnII	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
DraI	TTTAAA	1 cut(s)	1176
DrdI	GACNNNNNNGTC	1 cut(s)	785
DseDI	GACNNNNNNGTC	1 cut(s)	785
EaeI	YGGCCR	1 cut(s)	793
Eam1104I	CTCTTC	3 cut(s)	251, 405, 634
EarI	CTCTTC	3 cut(s)	251, 405, 634
EciI	GGCGGA	1 cut(s)	162
Ecl136II	GAGCTC	1 cut(s)	1400
Eco130I	CCWWGG	1 cut(s)	733
Eco24I	GRGCYC	1 cut(s)	1402
Eco31I	GGTCTC	1 cut(s)	603
Eco32I	GATATC	1 cut(s)	1315
Eco47I	GGWCC	1 cut(s)	1561
Eco47III	AGCGCT	1 cut(s)	1665
Eco53kI	GAGCTC	1 cut(s)	1400
Eco81I	CCTNAGG	1 cut(s)	588
Eco91I	GGTNACC	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	1400
EcoNI	CCTNNNNNAGG	1 cut(s)	402
EcoO109I	RGGNCCY	1 cut(s)	944
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRII	CCWGG	2 cut(s)	479, 1255
EcoRV	GATATC	1 cut(s)	1315
EcoT14I	CCWWGG	1 cut(s)	733
EcoT38I	GRGCYC	1 cut(s)	1402
ErhI	CCWWGG	1 cut(s)	733
Esp3I	CGTCTC	2 cut(s)	1842, 1863
FaeI	CATG	5 cut(s)	50, 102, 1420, 1633, 1756
FaqI	GGGAC	2 cut(s)	421, 1728
FatI	CATG	5 cut(s)	46, 98, 1416, 1629, 1752
FauI	CCCGC	1 cut(s)	1275
FauNDI	CATATG	1 cut(s)	1495
Fnu4HI	GCNGC	4 cut(s)	145, 882, 1113, 1646
FokI	GGATG	3 cut(s)	1202, 1263, 1857
FriOI	GRGCYC	1 cut(s)	1402
Fsp4HI	GCNGC	4 cut(s)	145, 882, 1113, 1646
FspBI	CTAG	3 cut(s)	38, 666, 1463
GlaI	GCGC	1 cut(s)	1665
GluI	GCNGC	4 cut(s)	145, 882, 1113, 1646
GsuI	CTGGAG	1 cut(s)	1688
HaeII	RGCGCY	1 cut(s)	1667
HaeIII	GGCC	4 cut(s)	732, 795, 946, 1500
HapII	CCGG	7 cut(s)	173, 179, 309, 315, 802, 1186, 1508
HgaI	GACGC	2 cut(s)	1530, 1824
HhaI	GCGC	1 cut(s)	1666
Hin1II	CATG	5 cut(s)	50, 102, 1420, 1633, 1756
Hin6I	GCGC	1 cut(s)	1664
HinP1I	GCGC	1 cut(s)	1664
HincII	GTYRAC	2 cut(s)	1345, 1933
HindII	GTYRAC	2 cut(s)	1345, 1933
HindIII	AAGCTT	1 cut(s)	536
HpaII	CCGG	7 cut(s)	173, 179, 309, 315, 802, 1186, 1508
HphI	GGTGA	5 cut(s)	54, 193, 1064, 1298, 1705
Hpy166II	GTNNAC	3 cut(s)	655, 1345, 1933
Hpy188I	TCNGA	7 cut(s)	136, 192, 301, 354, 1488, 1554, 1831
Hpy188III	TCNNGA	6 cut(s)	6, 86, 119, 290, 937, 1766
Hpy8I	GTNNAC	3 cut(s)	655, 1345, 1933
Hpy99I	CGWCG	3 cut(s)	111, 114, 192
HpyAV	CCTTC	4 cut(s)	1082, 1156, 1196, 1229
HpyCH4III	ACNGT	4 cut(s)	575, 1090, 1611, 1874
HpyCH4IV	ACGT	4 cut(s)	286, 708, 1104, 1638
HpyCH4V	TGCA	7 cut(s)	698, 1022, 1108, 1268, 1445, 1648, 1848
HpyF10VI	GCNNNNNNNGC	2 cut(s)	47, 1418
HpySE526I	ACGT	4 cut(s)	286, 708, 1104, 1638
Hsp92II	CATG	5 cut(s)	50, 102, 1420, 1633, 1756
HspAI	GCGC	1 cut(s)	1664
KspI	CCGCGG	1 cut(s)	1283
Kzo9I	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
LmnI	GCTCC	3 cut(s)	1334, 1397, 1405
Lsp1109I	GCAGC	3 cut(s)	893, 1124, 1632
LweI	GCATC	6 cut(s)	685, 1009, 1285, 1786, 1835, 1903
MaeI	CTAG	3 cut(s)	38, 666, 1463
MaeII	ACGT	4 cut(s)	286, 708, 1104, 1638
MaeIII	GTNAC	5 cut(s)	181, 1052, 1286, 1432, 1886
MalI	GATC	7 cut(s)	97, 240, 422, 507, 544, 568, 1485
MboI	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
MfeI	CAATTG	2 cut(s)	891, 1386
MflI	RGATCY	4 cut(s)	238, 505, 542, 566
MhlI	GDGCHC	2 cut(s)	819, 1402
MlsI	TGGCCA	1 cut(s)	795
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	3 cut(s)	178, 1027, 1373
MmeI	TCCRAC	3 cut(s)	170, 377, 464
Mox20I	TGGCCA	1 cut(s)	795
MroXI	GAANNNNTTC	2 cut(s)	1206, 1737
MscI	TGGCCA	1 cut(s)	795
MseI	TTAA	4 cut(s)	197, 342, 702, 1175
MslI	CAYNNNNRTG	2 cut(s)	650, 1574
Msp20I	TGGCCA	1 cut(s)	795
MspA1I	CMGCKG	1 cut(s)	1282
MspI	CCGG	7 cut(s)	173, 179, 309, 315, 802, 1186, 1508
MspR9I	CCNGG	4 cut(s)	481, 803, 1187, 1257
MssI	GTTTAAAC	1 cut(s)	1176
MunI	CAATTG	2 cut(s)	891, 1386
Mva1269I	GAATGC	1 cut(s)	1737
MvaI	CCWGG	2 cut(s)	481, 1257
MvnI	CGCG	1 cut(s)	1282
MwoI	GCNNNNNNNGC	2 cut(s)	47, 1418
NciI	CCSGG	2 cut(s)	803, 1187
NdeI	CATATG	1 cut(s)	1495
NdeII	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
NlaIII	CATG	5 cut(s)	50, 102, 1420, 1633, 1756
NlaIV	GGNNCC	4 cut(s)	177, 313, 507, 945
NmeAIII	GCCGAG	1 cut(s)	1928
NmuCI	GTSAC	4 cut(s)	181, 1052, 1286, 1432
NspI	RCATGY	1 cut(s)	50
PcsI	WCGNNNNNNNCGW	1 cut(s)	1878
PctI	GAATGC	1 cut(s)	1737
PdmI	GAANNNNTTC	2 cut(s)	1206, 1737
PkrI	GCNGC	4 cut(s)	146, 883, 1114, 1647
PleI	GAGTC	3 cut(s)	178, 1027, 1373
PmeI	GTTTAAAC	1 cut(s)	1176
PpsI	GAGTC	3 cut(s)	178, 1027, 1373
PshAI	GACNNNNGTC	1 cut(s)	711
Psp124BI	GAGCTC	1 cut(s)	1402
Psp6I	CCWGG	2 cut(s)	479, 1255
PspEI	GGTNACC	1 cut(s)	1286
PspGI	CCWGG	2 cut(s)	479, 1255
PspN4I	GGNNCC	4 cut(s)	177, 313, 507, 945
PspPI	GGNCC	2 cut(s)	944, 1561
PsuI	RGATCY	4 cut(s)	238, 505, 542, 566
RsaI	GTAC	1 cut(s)	1613
RsaNI	GTAC	1 cut(s)	1612
RseI	CAYNNNNRTG	2 cut(s)	650, 1574
SacI	GAGCTC	1 cut(s)	1402
SacII	CCGCGG	1 cut(s)	1283
SaqAI	TTAA	4 cut(s)	197, 342, 702, 1175
SatI	GCNGC	4 cut(s)	145, 882, 1113, 1646
Sau3AI	GATC	7 cut(s)	95, 238, 420, 505, 542, 566, 1483
Sau96I	GGNCC	2 cut(s)	944, 1561
SchI	GAGTC	3 cut(s)	178, 1027, 1373
ScrFI	CCNGG	4 cut(s)	481, 803, 1187, 1257
SduI	GDGCHC	2 cut(s)	819, 1402
SfaNI	GCATC	6 cut(s)	685, 1009, 1285, 1786, 1835, 1903
SfcI	CTRYAG	1 cut(s)	1917
Sfr303I	CCGCGG	1 cut(s)	1283
SgrBI	CCGCGG	1 cut(s)	1283
SinI	GGWCC	1 cut(s)	1561
SmiMI	CAYNNNNRTG	2 cut(s)	650, 1574
SmlI	CTYRAG	1 cut(s)	1349
SmoI	CTYRAG	1 cut(s)	1349
SsiI	CCGC	5 cut(s)	144, 147, 1280, 1282, 1799
SspMI	CTAG	3 cut(s)	38, 666, 1463
SstI	GAGCTC	1 cut(s)	1402
StyD4I	CCNGG	4 cut(s)	479, 801, 1185, 1255
StyI	CCWWGG	1 cut(s)	733
TaaI	ACNGT	4 cut(s)	575, 1090, 1611, 1874
TaiI	ACGT	4 cut(s)	289, 711, 1107, 1641
TaqI	TCGA	5 cut(s)	56, 715, 1794, 1881, 1907
TaqII	GACCGA	1 cut(s)	413
TatI	WGTACW	1 cut(s)	1611
TauI	GCSGC	1 cut(s)	147
Tru1I	TTAA	4 cut(s)	197, 342, 702, 1175
Tru9I	TTAA	4 cut(s)	197, 342, 702, 1175
TscAI	CASTG	3 cut(s)	1035, 1432, 1444
TseFI	GTSAC	4 cut(s)	181, 1052, 1286, 1432
TseI	GCWGC	3 cut(s)	881, 1112, 1645
Tsp45I	GTSAC	4 cut(s)	181, 1052, 1286, 1432
TspDTI	ATGAA	7 cut(s)	403, 881, 1064, 1155, 1443, 1646, 1800
TspRI	CASTG	3 cut(s)	1035, 1432, 1444
VpaK11BI	GGWCC	1 cut(s)	1561
XagI	CCTNNNNNAGG	1 cut(s)	402
XapI	RAATTY	1 cut(s)	849
XceI	RCATGY	1 cut(s)	50
XcmI	CCANNNNNNNNNTGG	2 cut(s)	591, 1687
XmnI	GAANNNNTTC	2 cut(s)	1206, 1737
XspI	CTAG	3 cut(s)	38, 666, 1463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.