Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008310

Physical Location & Seq

Genomic Coordinates Forward (+)

85475 .. 94126

Gene Structure 8652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G000600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGTCTGGAATGCTCAGATGGAAGAAGGTGAAGCATATAGCAGAGCTCCAGCAGCGGTTCACTCAGGTATCCCCAATCTCGACGCACTTGAACCACCTTCATGTCACGAGCCATCGCCGAAGAGAGTCTCTGATCGGAGTGCAGGAGCGCTACAAGTGGGACCACGGCGGCTCTGGCTCCGGCGGCGATGTTCGCACCCGCAAAATCAGGGCGGAGGCGAATTGCCCCCGCTGCTCCTTCAACCGCATGGATCTCCTCTTCTCCGATCGGCGCTTACCCAACTTATCTCCTCCAGATGATTCCATCACCAGCACCAAGACGACCACCAAGACCACCAAGACCAAGGCTGACGACTCTGAATTTCATCAGTATCAGGCCCTCAATCTCTGCCCCAATTGCAAAACCGCCTACTACTTCCGACCCCACCAGATTGCTCCCCTCCAGGGCACCTTCGTAGAGATTGGGAGACTCACCAACACCACCACCACCTCTTCCAATCGTAACGCCACCAGAACCAACTCCGACAACAAGTCCCATTCCAGAAATACCCAAAATACTAATAATAGTAATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTGGTGGAGATTCGATGCCTAATATTTACAGTAATGGGCTGAGGGTGTCTTTCTGGGACACTTTGAGGTCATATGCGAATGGGGTGGACCCACCAGACAACTGGCCTCCGCCTTCTCCTCCTCCTCCTCCAGGCAATGGGCTGGCCGTGCATACTCCTCCGGGCCCTCCTTTTGCCCCTGGAGTCAATGTCATTCGTGCTTCTGGGCCCCCTGGAGATGCTGGGGGAGACAACAACAATGCCTGGGGCGGTTCCAATTTGGGAAAAGATTTGCCCACGCCCAAGGAAATCTGCAAGGGTCTTGACAAGTTCGTTATTGGCCAACAAAGAGCCAAAAAGGTGCTTTCTGTGGCTGTTTATAACCATTACAAAAGAATATATCATGCCTCCTTGCAGAAAGGGTCAGGAGGAGAATCAGGAATTCCAAACACAATAGATGATGACGATAAAGTGGAGCTAGAAAAGAGCAATGTGCTCTTGATGGGCCCAACTGGCTCCGGGAAGACGTTGCTTGCAAAAACACTAGCTCGTTTTGTGAATGTGCCATTTGTGATTGCCGATGCAACAACTTTAACACAAGCTGGTTATGTTGGAGAGGATGTTGAATCAATATTGTACAAACTACTGATGGCAGCTGAATTCAATGTACAAGCAGCTCAACAAGGGATTGTTTACATTGATGAAGTTGACAAGATAACCAAGAAGGCTGAGAGTTTAAACATTAGCAGAGATGTTTCTGGAGAGGGTGTTCAGCAGGCTTTATTGAAAATGCTCGAAGGAACTATAGTGAATGTTCCTGAGAAAGGTGCAAGGAAGCACCCTCGGGGTGATAACATACAGATAGATACAAAAGATATTCTTTTTATTTGTGGTGGAGCCTTTATTGATCTTGAAAAAACCATTTCAGAAAGACGGCAAGATTCTTCTATCGGTTTCGGTGCTCCTGTTCGTGCCAACATGAGAGCTGGTGGTGTGACTGATGCAGTGGTGACATCATCTTTACTTGAATCGGTTGAAAGTTCCGATCTCATTGCATATGGACTCATACCAGAGTTTATTGGACGTTTTCCAATATTAGTTAGTTTAACGGCCTTAACTGAGGACCAACTTGTTCAGGTCCTCACGAAACCAAAAAATGCTCTTGGCAAGCAGTACAAGAAATTATTTACAATGAATAACGTGAAGCTACATTTTGAGGATAAGGCACTGAGACTTATTGCAAAGAAGGCGATGGCTAAGAATACCGGTGCCAGGGGTTTAAGAGCACTTTTGGAAAGCATTCTAACTGAAGCCATGTATGAGATTCCAGATGTTAAGACAGGAATTGATAGAATAGATGCTGTAGTGGTTGATGAAGAGTCAGTGGGTTCGGTAAATACCCCTGGATGTGGAGGCAAGCTTGTTCGAGGGGATGGTGCATTGGAAAGATACTTGAGTGAAATCAAGTTGAAGCACTCAGTGGAAAATGTAGAGGCGGCTGAAGGAGAAGCAGAGGGTGAATCAGAACAATCGTCCAGAGCTATGAGCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004176 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006508 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0030163 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04112 map04112

Pfam Domains

Protein Families

AAA_2 ClpB_D2-small

Protein Analysis

717

Amino Acids

77.1

Weight (kDa)

8.67

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33360
fragaria_vesca	FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040
malus_domestica	MD00G1089200.v1.1
prunus_persica	Prupe.8G000600_v2.0.a1
pyrus_communis	pycom215g00140
rosa_chinensis	RchiOBHm_Chr6g0249331
rosa_laevigata	RLG00000015591
rosa_roxburghii	Rroxscaffold_7G00217860
rosa_rugosa	Rorug05G0490400 Rorug05G0490500.1
rosa_samantha	Rh6AG001200 Rh6BG009100 Rh6CG000300 Rh6DG000200
rosa_wichuraiana	Rw6G000180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	978
AccB1I	GGYRCC	2 cut(s)	446, 1865
AccB7I	CCANNNNNTGG	1 cut(s)	755
AclWI	GGATC	1 cut(s)	258
AcoI	YGGCCR	2 cut(s)	762, 937
AcsI	RAATTY	3 cut(s)	359, 1038, 1256
AcuI	CTGAAG	2 cut(s)	1926, 2118
AdeI	CACNNNGTG	1 cut(s)	2077
AfaI	GTAC	3 cut(s)	1235, 1266, 1772
AfeI	AGCGCT	1 cut(s)	149
AfiI	CCNNNNNNNGG	6 cut(s)	443, 749, 755, 1421, 1869, 2006
AgeI	ACCGGT	1 cut(s)	1862
AgsI	TTSAA	9 cut(s)	91, 241, 1223, 1261, 1384, 1511, 1625, 1634, 2068
AhdI	GACNNNNNGTC	1 cut(s)	529
AjnI	CCWGG	7 cut(s)	441, 748, 796, 829, 860, 1868, 1999
AloI	GAACNNNNNNTCC	2 cut(s)	1350, 1382
Alw21I	GWGCWC	4 cut(s)	48, 1095, 1561, 1885
Alw26I	GTCTC	4 cut(s)	132, 460, 840, 1822
AlwI	GGATC	1 cut(s)	258
Ama87I	CYCGRG	1 cut(s)	1440
Aor51HI	AGCGCT	1 cut(s)	149
AoxI	GGCC	8 cut(s)	375, 722, 762, 781, 824, 937, 1102, 1707
ApaI	GGGCCC	3 cut(s)	785, 828, 1106
ApeKI	GCWGC	4 cut(s)	52, 231, 1250, 1271
ApoI	RAATTY	3 cut(s)	359, 1038, 1256
AsiGI	ACCGGT	1 cut(s)	1862
Asp700I	GAANNNNTTC	1 cut(s)	1896
AspLEI	GCGC	2 cut(s)	150, 273
AsuC2I	CCSGG	2 cut(s)	780, 1117
AsuHPI	GGTGA	6 cut(s)	40, 298, 463, 1457, 1618, 2126
AvaI	CYCGRG	1 cut(s)	1440
AvaII	GGWCC	4 cut(s)	160, 706, 1720, 1735
BaeGI	GKGCMC	4 cut(s)	449, 785, 828, 1106
BaeI	ACNNNNGTAYC	4 cut(s)	51, 84, 2038, 2071
BalI	TGGCCA	1 cut(s)	939
BanI	GGYRCC	2 cut(s)	446, 1865
BanII	GRGCYC	4 cut(s)	48, 785, 828, 1106
BauI	CACGAG	1 cut(s)	106
BbsI	GAAGAC	1 cut(s)	1127
Bbv12I	GWGCWC	4 cut(s)	48, 1095, 1561, 1885
BbvCI	CCTCAGC	1 cut(s)	659
BbvI	GCAGC	4 cut(s)	64, 218, 1262, 1283
BccI	CCATC	7 cut(s)	12, 120, 311, 1093, 1240, 1843, 2024
BceAI	ACGGC	4 cut(s)	181, 749, 1547, 1722
BcgI	CGANNNNNNTGC	2 cut(s)	1631, 1665
BciT130I	CCWGG	7 cut(s)	443, 750, 798, 831, 862, 1870, 2001
BciVI	GTATCC	1 cut(s)	79
BcnI	CCSGG	2 cut(s)	780, 1117
BcoDI	GTCTC	4 cut(s)	132, 460, 840, 1822
BfaI	CTAG	2 cut(s)	1076, 1142
BfmI	CTRYAG	2 cut(s)	1401, 1959
BfoI	RGCGCY	2 cut(s)	151, 274
BfuI	GTATCC	1 cut(s)	79
BglI	GCCNNNNNGGC	1 cut(s)	1110
BisI	GCNGC	7 cut(s)	53, 169, 184, 232, 1251, 1272, 2094
BlsI	GCNGC	7 cut(s)	54, 170, 185, 233, 1252, 1273, 2095
Bme1390I	CCNGG	9 cut(s)	443, 750, 780, 798, 831, 862, 1117, 1870, 2001
Bme18I	GGWCC	4 cut(s)	160, 706, 1720, 1735
BmeRI	GACNNNNNGTC	1 cut(s)	529
BmeT110I	CYCGRG	1 cut(s)	1440
BmrFI	CCNGG	9 cut(s)	443, 750, 780, 798, 831, 862, 1117, 1870, 2001
BmsI	GCATC	5 cut(s)	624, 826, 1168, 1588, 1945
BpiI	GAAGAC	1 cut(s)	1127
BpmI	CTGGAG	7 cut(s)	32, 276, 425, 732, 819, 852, 1377
Bpu10I	CCTNAGC	1 cut(s)	659
BpuEI	CTTGAG	1 cut(s)	2071
BpuMI	CCSGG	2 cut(s)	780, 1117
BsaWI	WCCGGW	1 cut(s)	1862
BsaXI	ACNNNNNCTCC	6 cut(s)	792, 822, 1203, 1233, 1350, 1380
Bsc4I	CCNNNNNNNGG	6 cut(s)	443, 749, 755, 1421, 1869, 2006
Bse118I	RCCGGY	1 cut(s)	1862
Bse1I	ACTGG	2 cut(s)	725, 1114
Bse3DI	GCAATG	3 cut(s)	760, 1093, 1647
BseBI	CCWGG	7 cut(s)	443, 750, 798, 831, 862, 1870, 2001
BseGI	GGATG	3 cut(s)	1222, 2009, 2035
BseLI	CCNNNNNNNGG	6 cut(s)	443, 749, 755, 1421, 1869, 2006
BseMI	GCAATG	3 cut(s)	760, 1093, 1647
BseMII	CTCAG	8 cut(s)	28, 77, 650, 1317, 1407, 1707, 1817, 2088
BseNI	ACTGG	2 cut(s)	725, 1114
BseSI	GKGCMC	4 cut(s)	449, 785, 828, 1106
BseXI	GCAGC	4 cut(s)	64, 218, 1262, 1283
BseYI	CCCAGC	1 cut(s)	839
BsgI	GTGCAG	1 cut(s)	161
Bsh1285I	CGRYCG	1 cut(s)	268
BshFI	GGCC	8 cut(s)	377, 724, 764, 783, 826, 939, 1104, 1709
BshNI	GGYRCC	2 cut(s)	446, 1865
BshTI	ACCGGT	1 cut(s)	1862
BsiEI	CGRYCG	1 cut(s)	268
BsiHKAI	GWGCWC	4 cut(s)	48, 1095, 1561, 1885
BsiHKCI	CYCGRG	1 cut(s)	1440
BsiSI	CCGG	4 cut(s)	180, 779, 1116, 1863
BslFI	GGGAC	3 cut(s)	173, 517, 689
BslI	CCNNNNNNNGG	6 cut(s)	443, 749, 755, 1421, 1869, 2006
BsmAI	GTCTC	4 cut(s)	132, 460, 840, 1822
BsmFI	GGGAC	3 cut(s)	173, 517, 689
BsmI	GAATGC	2 cut(s)	15, 1896
BsnI	GGCC	8 cut(s)	377, 724, 764, 783, 826, 939, 1104, 1709
BsoBI	CYCGRG	1 cut(s)	1440
Bsp120I	GGGCCC	3 cut(s)	781, 824, 1102
Bsp1286I	GDGCHC	8 cut(s)	48, 449, 785, 828, 1095, 1106, 1561, 1885
Bsp1407I	TGTACA	2 cut(s)	1233, 1264
Bsp143I	GATC	5 cut(s)	132, 250, 265, 1504, 1642
BspANI	GGCC	8 cut(s)	377, 724, 764, 783, 826, 939, 1104, 1709
BspCNI	CTCAG	8 cut(s)	27, 76, 651, 1318, 1408, 1708, 1818, 2087
BspPI	GGATC	1 cut(s)	258
BspT107I	GGYRCC	2 cut(s)	446, 1865
BsrDI	GCAATG	3 cut(s)	760, 1093, 1647
BsrFI	RCCGGY	1 cut(s)	1862
BsrGI	TGTACA	2 cut(s)	1233, 1264
BsrI	ACTGG	2 cut(s)	725, 1114
BssAI	RCCGGY	1 cut(s)	1862
BssMI	GATC	5 cut(s)	132, 250, 265, 1504, 1642
BssSI	CACGAG	1 cut(s)	106
BssT1I	CCWWGG	2 cut(s)	342, 900
Bst2BI	CACGAG	1 cut(s)	106
Bst2UI	CCWGG	7 cut(s)	443, 750, 798, 831, 862, 1870, 2001
Bst4CI	ACNGT	1 cut(s)	650
Bst6I	CTCTTC	4 cut(s)	115, 263, 496, 1968
BstAUI	TGTACA	2 cut(s)	1233, 1264
BstC8I	GCNNGC	5 cut(s)	762, 1131, 1374, 1766, 2015
BstDEI	CTNAG	9 cut(s)	14, 63, 659, 1326, 1416, 1716, 1826, 1854, 2074
BstDSI	CCRYGG	1 cut(s)	163
BstENI	CCTNNNNNAGG	2 cut(s)	747, 1419
BstF5I	GGATG	3 cut(s)	1222, 2009, 2035
BstH2I	RGCGCY	2 cut(s)	151, 274
BstHHI	GCGC	2 cut(s)	150, 273
BstKTI	GATC	5 cut(s)	135, 253, 268, 1507, 1645
BstMAI	GTCTC	4 cut(s)	132, 460, 840, 1822
BstMBI	GATC	5 cut(s)	132, 250, 265, 1504, 1642
BstMCI	CGRYCG	1 cut(s)	268
BstMWI	GCNNNNNNNGC	9 cut(s)	52, 174, 183, 192, 231, 396, 766, 1110, 1844
BstNI	CCWGG	7 cut(s)	443, 750, 798, 831, 862, 1870, 2001
BstNSI	RCATGY	1 cut(s)	2149
BstSCI	CCNGG	9 cut(s)	441, 748, 778, 796, 829, 860, 1115, 1868, 1999
BstSFI	CTRYAG	2 cut(s)	1401, 1959
BstSLI	GKGCMC	4 cut(s)	449, 785, 828, 1106
BstV1I	GCAGC	4 cut(s)	64, 218, 1262, 1283
BstV2I	GAAGAC	1 cut(s)	1127
BstX2I	RGATCY	1 cut(s)	250
BstXI	CCANNNNNNTGG	1 cut(s)	720
BstYI	RGATCY	1 cut(s)	250
BsuI	GTATCC	1 cut(s)	79
BsuRI	GGCC	8 cut(s)	377, 724, 764, 783, 826, 939, 1104, 1709
BtgI	CCRYGG	1 cut(s)	163
BtgZI	GCGATG	3 cut(s)	98, 201, 1862
BtsCI	GGATG	3 cut(s)	1222, 2009, 2035
BtsI	GCAGTG	1 cut(s)	1608
BtsIMutI	CAGTG	4 cut(s)	1608, 1823, 1986, 2082
Cac8I	GCNNGC	5 cut(s)	762, 1131, 1374, 1766, 2015
CfoI	GCGC	2 cut(s)	150, 273
Cfr10I	RCCGGY	1 cut(s)	1862
CseI	GACGC	1 cut(s)	91
Csp6I	GTAC	3 cut(s)	1234, 1265, 1771
CspAI	ACCGGT	1 cut(s)	1862
CviAII	CATG	6 cut(s)	101, 247, 1001, 1576, 1912, 2146
CviQI	GTAC	3 cut(s)	1234, 1265, 1771
DdeI	CTNAG	9 cut(s)	14, 63, 659, 1326, 1416, 1716, 1826, 1854, 2074
DpnI	GATC	5 cut(s)	134, 252, 267, 1506, 1644
DpnII	GATC	5 cut(s)	132, 250, 265, 1504, 1642
DraI	TTTAAA	1 cut(s)	1335
DraIII	CACNNNGTG	1 cut(s)	2077
DriI	GACNNNNNGTC	1 cut(s)	529
EaeI	YGGCCR	2 cut(s)	762, 937
Eam1104I	CTCTTC	4 cut(s)	115, 263, 496, 1968
Eam1105I	GACNNNNNGTC	1 cut(s)	529
EarI	CTCTTC	4 cut(s)	115, 263, 496, 1968
EciI	GGCGGA	2 cut(s)	227, 717
Ecl136II	GAGCTC	1 cut(s)	46
Eco130I	CCWWGG	2 cut(s)	342, 900
Eco24I	GRGCYC	4 cut(s)	48, 785, 828, 1106
Eco47I	GGWCC	4 cut(s)	160, 706, 1720, 1735
Eco47III	AGCGCT	1 cut(s)	149
Eco53kI	GAGCTC	1 cut(s)	46
Eco57I	CTGAAG	2 cut(s)	1926, 2118
Eco88I	CYCGRG	1 cut(s)	1440
EcoICRI	GAGCTC	1 cut(s)	46
EcoNI	CCTNNNNNAGG	2 cut(s)	747, 1419
EcoO109I	RGGNCCY	4 cut(s)	376, 782, 825, 1735
EcoRI	GAATTC	2 cut(s)	1038, 1256
EcoRII	CCWGG	7 cut(s)	441, 748, 796, 829, 860, 1868, 1999
EcoT14I	CCWWGG	2 cut(s)	342, 900
EcoT38I	GRGCYC	4 cut(s)	48, 785, 828, 1106
ErhI	CCWWGG	2 cut(s)	342, 900
FaeI	CATG	6 cut(s)	104, 250, 1004, 1579, 1915, 2149
FalI	AAGNNNNNCTT	2 cut(s)	1461, 1493
FaqI	GGGAC	3 cut(s)	173, 517, 689
FatI	CATG	6 cut(s)	100, 246, 1000, 1575, 1911, 2145
FauI	CCCGC	2 cut(s)	206, 236
FauNDI	CATATG	2 cut(s)	691, 1654
Fnu4HI	GCNGC	7 cut(s)	53, 169, 184, 232, 1251, 1272, 2094
FokI	GGATG	3 cut(s)	1229, 2016, 2042
FriOI	GRGCYC	4 cut(s)	48, 785, 828, 1106
Fsp4HI	GCNGC	7 cut(s)	53, 169, 184, 232, 1251, 1272, 2094
FspBI	CTAG	2 cut(s)	1076, 1142
GlaI	GCGC	2 cut(s)	149, 272
GluI	GCNGC	7 cut(s)	53, 169, 184, 232, 1251, 1272, 2094
GsaI	CCCAGC	1 cut(s)	843
GsuI	CTGGAG	7 cut(s)	32, 276, 425, 732, 819, 852, 1377
HaeII	RGCGCY	2 cut(s)	151, 274
HaeIII	GGCC	8 cut(s)	377, 724, 764, 783, 826, 939, 1104, 1709
HapII	CCGG	4 cut(s)	180, 779, 1116, 1863
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	2 cut(s)	150, 273
Hin1II	CATG	6 cut(s)	104, 250, 1004, 1579, 1915, 2149
Hin6I	GCGC	2 cut(s)	148, 271
HinP1I	GCGC	2 cut(s)	148, 271
HincII	GTYRAC	1 cut(s)	1306
HindII	GTYRAC	1 cut(s)	1306
HindIII	AAGCTT	1 cut(s)	2015
HpaII	CCGG	4 cut(s)	180, 779, 1116, 1863
HphI	GGTGA	6 cut(s)	40, 298, 463, 1457, 1618, 2126
Hpy166II	GTNNAC	4 cut(s)	60, 706, 1291, 1306
Hpy8I	GTNNAC	4 cut(s)	60, 706, 1291, 1306
Hpy99I	CGWCG	1 cut(s)	85
HpyAV	CCTTC	9 cut(s)	19, 107, 247, 460, 741, 1315, 1388, 1837, 2093
HpyCH4III	ACNGT	1 cut(s)	650
HpyCH4IV	ACGT	3 cut(s)	1124, 1681, 1797
HpyF10VI	GCNNNNNNNGC	9 cut(s)	52, 174, 183, 192, 231, 396, 766, 1110, 1844
HpyF3I	CTNAG	9 cut(s)	14, 63, 659, 1326, 1416, 1716, 1826, 1854, 2074
HpySE526I	ACGT	3 cut(s)	1124, 1681, 1797
Hsp92II	CATG	6 cut(s)	104, 250, 1004, 1579, 1915, 2149
HspAI	GCGC	2 cut(s)	148, 271
Kzo9I	GATC	5 cut(s)	132, 250, 265, 1504, 1642
LmnI	GCTCC	9 cut(s)	51, 145, 182, 239, 439, 1072, 1118, 1493, 1564
Lsp1109I	GCAGC	4 cut(s)	64, 218, 1262, 1283
LweI	GCATC	5 cut(s)	624, 826, 1168, 1588, 1945
MaeI	CTAG	2 cut(s)	1076, 1142
MaeII	ACGT	3 cut(s)	1124, 1681, 1797
MaeIII	GTNAC	4 cut(s)	103, 500, 1591, 1606
MalI	GATC	5 cut(s)	134, 252, 267, 1506, 1644
MboI	GATC	5 cut(s)	132, 250, 265, 1504, 1642
MboII	GAAGA	7 cut(s)	34, 132, 250, 483, 1132, 1533, 1985
MfeI	CAATTG	1 cut(s)	394
MflI	RGATCY	1 cut(s)	250
MhlI	GDGCHC	8 cut(s)	48, 449, 785, 828, 1095, 1106, 1561, 1885
MlsI	TGGCCA	1 cut(s)	939
MluCI	AATT	8 cut(s)	220, 359, 394, 874, 1038, 1256, 1778, 1941
MluNI	TGGCCA	1 cut(s)	939
MlyI	GAGTC	6 cut(s)	134, 347, 462, 810, 1653, 1985
MmeI	TCCRAC	3 cut(s)	442, 546, 1189
Mox20I	TGGCCA	1 cut(s)	939
MroXI	GAANNNNTTC	1 cut(s)	1896
MscI	TGGCCA	1 cut(s)	939
MseI	TTAA	6 cut(s)	1190, 1334, 1703, 1712, 1877, 1932
MslI	CAYNNNNRTG	1 cut(s)	99
Msp20I	TGGCCA	1 cut(s)	939
MspA1I	CMGCKG	3 cut(s)	55, 231, 1253
MspI	CCGG	4 cut(s)	180, 779, 1116, 1863
MspR9I	CCNGG	9 cut(s)	443, 750, 780, 798, 831, 862, 1117, 1870, 2001
MssI	GTTTAAAC	1 cut(s)	1335
MunI	CAATTG	1 cut(s)	394
Mva1269I	GAATGC	2 cut(s)	15, 1896
MvaI	CCWGG	7 cut(s)	443, 750, 798, 831, 862, 1870, 2001
MwoI	GCNNNNNNNGC	9 cut(s)	52, 174, 183, 192, 231, 396, 766, 1110, 1844
NciI	CCSGG	2 cut(s)	780, 1117
NdeI	CATATG	2 cut(s)	691, 1654
NdeII	GATC	5 cut(s)	132, 250, 265, 1504, 1642
NlaIII	CATG	6 cut(s)	104, 250, 1004, 1579, 1915, 2149
NmuCI	GTSAC	3 cut(s)	103, 1591, 1606
NspI	RCATGY	1 cut(s)	2149
PctI	GAATGC	2 cut(s)	15, 1896
PdmI	GAANNNNTTC	1 cut(s)	1896
PfeI	GAWTC	8 cut(s)	299, 629, 1031, 1223, 1538, 1625, 1921, 2117
PflMI	CCANNNNNTGG	1 cut(s)	755
PfoI	TCCNGGA	1 cut(s)	1115
PinAI	ACCGGT	1 cut(s)	1862
PkrI	GCNGC	7 cut(s)	54, 170, 185, 233, 1252, 1273, 2095
Ple19I	CGATCG	1 cut(s)	268
PleI	GAGTC	6 cut(s)	133, 347, 462, 809, 1653, 1984
PmeI	GTTTAAAC	1 cut(s)	1335
PpsI	GAGTC	6 cut(s)	133, 347, 462, 809, 1653, 1984
PpuMI	RGGWCCY	1 cut(s)	1735
PsiI	TTATAA	1 cut(s)	978
Psp124BI	GAGCTC	1 cut(s)	48
Psp5II	RGGWCCY	1 cut(s)	1735
Psp6I	CCWGG	7 cut(s)	441, 748, 796, 829, 860, 1868, 1999
PspFI	CCCAGC	1 cut(s)	839
PspGI	CCWGG	7 cut(s)	441, 748, 796, 829, 860, 1868, 1999
PspOMI	GGGCCC	3 cut(s)	781, 824, 1102
PspPPI	RGGWCCY	1 cut(s)	1735
PsuI	RGATCY	1 cut(s)	250
PvuI	CGATCG	1 cut(s)	268
PvuII	CAGCTG	1 cut(s)	1253
RsaI	GTAC	3 cut(s)	1235, 1266, 1772
RsaNI	GTAC	3 cut(s)	1234, 1265, 1771
RseI	CAYNNNNRTG	1 cut(s)	99
SacI	GAGCTC	1 cut(s)	48
SaqAI	TTAA	6 cut(s)	1190, 1334, 1703, 1712, 1877, 1932
SatI	GCNGC	7 cut(s)	53, 169, 184, 232, 1251, 1272, 2094
Sau3AI	GATC	5 cut(s)	132, 250, 265, 1504, 1642
SchI	GAGTC	6 cut(s)	134, 347, 462, 810, 1653, 1985
ScrFI	CCNGG	9 cut(s)	443, 750, 780, 798, 831, 862, 1117, 1870, 2001
SduI	GDGCHC	8 cut(s)	48, 449, 785, 828, 1095, 1106, 1561, 1885
SfaNI	GCATC	5 cut(s)	624, 826, 1168, 1588, 1945
SfcI	CTRYAG	2 cut(s)	1401, 1959
SinI	GGWCC	4 cut(s)	160, 706, 1720, 1735
SmiMI	CAYNNNNRTG	1 cut(s)	99
SmlI	CTYRAG	1 cut(s)	2050
SmoI	CTYRAG	1 cut(s)	2050
Sse9I	AATT	8 cut(s)	220, 359, 394, 874, 1038, 1256, 1778, 1941
SspI	AATATT	3 cut(s)	643, 1230, 1692
SspMI	CTAG	2 cut(s)	1076, 1142
SstI	GAGCTC	1 cut(s)	48
StyD4I	CCNGG	9 cut(s)	441, 748, 778, 796, 829, 860, 1115, 1868, 1999
StyI	CCWWGG	2 cut(s)	342, 900
TaaI	ACNGT	1 cut(s)	650
TaiI	ACGT	3 cut(s)	1127, 1684, 1800
TaqI	TCGA	4 cut(s)	80, 632, 1392, 2023
TasI	AATT	8 cut(s)	220, 359, 394, 874, 1038, 1256, 1778, 1941
TatI	WGTACW	3 cut(s)	1233, 1264, 1770
TauI	GCSGC	3 cut(s)	171, 186, 2096
TfiI	GAWTC	8 cut(s)	299, 629, 1031, 1223, 1538, 1625, 1921, 2117
Tru1I	TTAA	6 cut(s)	1190, 1334, 1703, 1712, 1877, 1932
Tru9I	TTAA	6 cut(s)	1190, 1334, 1703, 1712, 1877, 1932
TscAI	CASTG	4 cut(s)	1608, 1830, 1986, 2082
TseFI	GTSAC	3 cut(s)	103, 1591, 1606
TseI	GCWGC	4 cut(s)	52, 231, 1250, 1271
Tsp45I	GTSAC	3 cut(s)	103, 1591, 1606
TspDTI	ATGAA	5 cut(s)	89, 353, 1314, 1805, 1986
TspRI	CASTG	4 cut(s)	1608, 1830, 1986, 2082
Van91I	CCANNNNNTGG	1 cut(s)	755
VpaK11BI	GGWCC	4 cut(s)	160, 706, 1720, 1735
XagI	CCTNNNNNAGG	2 cut(s)	747, 1419
XapI	RAATTY	3 cut(s)	359, 1038, 1256
XceI	RCATGY	1 cut(s)	2149
XcmI	CCANNNNNNNNNTGG	2 cut(s)	170, 717
XmnI	GAANNNNTTC	1 cut(s)	1896
XspI	CTAG	2 cut(s)	1076, 1142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.