Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0008310

Physical Location & Seq

Genomic Coordinates Forward (+)

153645 .. 162556

Gene Structure 8912 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g00040.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGTCCGGCATGCTGAGATGGAAGAAGGTAAAGCATATAGCACAGCTCAACCAGCGGTTCACTCAAGTATCCGCAATCTCCACGCACCTCAACCACTTGAATATTCATCATCGCCGAAGAAGAGAGTCTCTCATCGGAGTGCAGGCGCGCTACAAGTGGGATCACGGCGGCTCCGGCTCCGGCGATGCCCGCTCCACCCGTAAAATCAGGGCAGAGGCCAACTGCCCCCGGTGCTCCTTCAACCGCATGGACCTCATCTTCTCCGATCGCCGCTTATCTAACTTATCTCCGGACGATGCCGCCGGCAAGACCACCTCTGAGCTTCAGTATCAGGCCCTCAATCTCTGCCCCAATTGCAAGACCGCCTACTACTTCCGACCTCACCTGATTGCTCCCCTCCAAGGCACTTTCGTGGAGATTGGGAGGCTCACCAACACTAACCCAACCTCTTCCAATCGCCAAACCGCCACCAAAATCAAAACCAATTCCAATTCTAGTACCTCAAACGACGATCCTCTGCGGGCAACCTTCTGGGACACTTTGAGATCATTTGCTAATGCGAATGAGCCACCTGGCCCTCCCAATGGACTTGCCGTGCATACGCCCCCGGGCCCACCTTTCGCACCCGGAGTCAATGTCATTCGGGCTACCGGAGATGCCCCCGATGCTGGCGACAACAAGGCCTGGGGCGGCTCCAATTTGGGAAAGGATTTGCCCACGCCTAAGGAGATCTGCAAGGCTCTCGATAAGTTCGTCATTGGCCAACAAAGAGCCAAAAAGGTGCTTTCTGTAGCCGTTTATAACCACTACAAACGAATTTATCAATCCTCCTTGCCCAAAGGGTCAGCTGCAGAACCTGCAAGTCCAAACACAATAGATAAAGAAGACAGTGTAGAGCTAGAAAAGAGCAATGTTCTCTTGATGGGCCCAACTGGATCTGGGAAGACATTGCTTGCAAAAACACTAGCTCGATTTGTGAATGTGCCATTCGTCATTACTGATGCAACAAATTTAACACAGGCTGGTTATGTTGGGGAAGATGTTGAATCAATATTGCAAAAATTATTGGCGGCAGCTGACTTCAATGTTCAAGCAGCTCAACAAGGGATTGTTTACATTGATGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCTTAAACATTAGCAGAGATGTTTCCGGAGAGGGCGTTCAGCAGGCTTTACTGAAAATGCTTGAAGGAACTATAGTGAACGTTCCTGAGAAGGGTGCGAGGAAGCATCCACGGGGTGATAACATACAGATAGATACAAAAGATATCCTTTTTATTTGTGGTGGAGCATTTGTAGATCTTGAAAAAACCATTTCAGAGAGACGACAAGATTCTTCTATTGGATTTGGTGCTCCTGTGCGTGCCAATATGAGAGCTGGTGGTGTAACTAACGCAATAGTGACATCATCTTTACTTGAATCGGTTGAAAGTGCTGATCTCATTGCATATGGACTCATACCAGAGTTTATTGGGCGTTTTGCAATATTAGTTAGTTTATCTGCATTAACTGAAGACCAACTTGTTGAGGTACTCACGGAACCAAAAAATGCCCTTGGTGAAGCTGCATTTCACGGACAAAGCTCTAAGACTCATGGCAAAGAAAGCGATGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004176 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006508 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0030163 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04112 map04112

Pfam Domains

Protein Families

AAA_2 ClpB_D2-small

Protein Analysis

548

Amino Acids

59.29

Weight (kDa)

9.0

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_2	PF07724	301 - 505	2.3e-30	AAA domain (Cdc48 subfamily)
AAA	PF00004	305 - 411	1.2e-15	ATPase family associated with various cellular activities (AAA)
ClpB_D2-small	PF10431	512 - 581	4.3e-10	C-terminal, D2-small domain, of ClpB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33360
fragaria_vesca	FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040 FvH4_2g00040
malus_domestica	MD00G1089200.v1.1
prunus_persica	Prupe.8G000600_v2.0.a1
pyrus_communis	pycom215g00140
rosa_chinensis	RchiOBHm_Chr6g0249331
rosa_laevigata	RLG00000015591
rosa_roxburghii	Rroxscaffold_7G00217860
rosa_rugosa	Rorug05G0490400 Rorug05G0490500.1
rosa_samantha	Rh6AG001200 Rh6BG009100 Rh6CG000300 Rh6DG000200
rosa_wichuraiana	Rw6G000180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	801
Acc36I	ACCTGC	1 cut(s)	865
AccBSI	CCGCTC	1 cut(s)	192
AccII	CGCG	1 cut(s)	148
AccIII	TCCGGA	2 cut(s)	289, 1178
AclI	AACGTT	1 cut(s)	1233
AclWI	GGATC	3 cut(s)	168, 506, 943
AcoI	YGGCCR	1 cut(s)	760
AcsI	RAATTY	2 cut(s)	816, 1009
AcuI	CTGAAG	2 cut(s)	308, 1560
AdeI	CACNNNGTG	1 cut(s)	1268
AfaI	GTAC	2 cut(s)	499, 1560
AfiI	CCNNNNNNNGG	4 cut(s)	401, 584, 668, 1244
AgsI	TTSAA	9 cut(s)	100, 241, 1046, 1084, 1091, 1217, 1334, 1448, 1457
AjnI	CCWGG	2 cut(s)	571, 683
AleI	CACNNNNGTG	1 cut(s)	410
AloI	GAACNNNNNNTCC	2 cut(s)	1173, 1205
Alw21I	GWGCWC	2 cut(s)	236, 1384
Alw26I	GTCTC	2 cut(s)	132, 1345
AlwI	GGATC	3 cut(s)	168, 506, 943
AlwNI	CAGNNNCTG	1 cut(s)	857
Ama87I	CYCGRG	1 cut(s)	607
Aor13HI	TCCGGA	2 cut(s)	289, 1178
AoxI	GGCC	7 cut(s)	216, 333, 574, 610, 681, 760, 925
ApaI	GGGCCC	2 cut(s)	614, 929
ApeKI	GCWGC	4 cut(s)	848, 1073, 1094, 1592
ApoI	RAATTY	2 cut(s)	816, 1009
AspLEI	GCGC	2 cut(s)	148, 150
AspS9I	GGNCC	7 cut(s)	250, 334, 575, 610, 611, 925, 926
AsuC2I	CCSGG	4 cut(s)	229, 608, 609, 627
AsuHPI	GGTGA	4 cut(s)	374, 421, 1280, 1598
AvaI	CYCGRG	1 cut(s)	607
AvaII	GGWCC	1 cut(s)	250
AxyI	CCTNAGG	1 cut(s)	723
BaeGI	GKGCMC	2 cut(s)	614, 929
BaeI	ACNNNNGTAYC	2 cut(s)	51, 84
BalI	TGGCCA	1 cut(s)	762
BanII	GRGCYC	2 cut(s)	614, 929
BbsI	GAAGAC	3 cut(s)	891, 950, 1548
Bbv12I	GWGCWC	2 cut(s)	236, 1384
BbvI	GCAGC	4 cut(s)	835, 1085, 1106, 1579
BccI	CCATC	3 cut(s)	12, 916, 1631
BceAI	ACGGC	3 cut(s)	181, 578, 779
BcgI	CGANNNNNNTGC	2 cut(s)	724, 758
BciT130I	CCWGG	2 cut(s)	573, 685
BciVI	GTATCC	1 cut(s)	79
BcnI	CCSGG	4 cut(s)	229, 608, 609, 627
BcoDI	GTCTC	2 cut(s)	132, 1345
BfaI	CTAG	3 cut(s)	495, 899, 965
BfmI	CTRYAG	3 cut(s)	789, 849, 1224
BfuAI	ACCTGC	1 cut(s)	865
BfuI	GTATCC	1 cut(s)	79
BglII	AGATCT	2 cut(s)	729, 1327
BisI	GCNGC	9 cut(s)	169, 271, 300, 691, 849, 1071, 1074, 1095, 1593
BlsI	GCNGC	9 cut(s)	170, 272, 301, 692, 850, 1072, 1075, 1096, 1594
Bme1390I	CCNGG	6 cut(s)	229, 573, 608, 609, 627, 685
Bme18I	GGWCC	1 cut(s)	250
BmeT110I	CYCGRG	1 cut(s)	607
BmgT120I	GGNCC	7 cut(s)	250, 334, 575, 610, 611, 925, 926
BmiI	GGNNCC	6 cut(s)	172, 178, 612, 694, 927, 1569
BmrFI	CCNGG	6 cut(s)	229, 573, 608, 609, 627, 685
BmsI	GCATC	6 cut(s)	175, 286, 646, 655, 991, 1267
BpiI	GAAGAC	3 cut(s)	891, 950, 1548
BplI	GAGNNNNNCTC	2 cut(s)	114, 146
BpuEI	CTTGAG	1 cut(s)	48
BpuMI	CCSGG	4 cut(s)	229, 608, 609, 627
BsaJI	CCNNGG	7 cut(s)	227, 400, 606, 607, 684, 1262, 1582
BsaWI	WCCGGW	3 cut(s)	289, 650, 1178
BsaXI	ACNNNNNCTCC	8 cut(s)	155, 185, 621, 651, 1173, 1203, 1308, 1338
Bsc4I	CCNNNNNNNGG	4 cut(s)	401, 584, 668, 1244
Bse118I	RCCGGY	1 cut(s)	302
Bse1I	ACTGG	1 cut(s)	937
Bse21I	CCTNAGG	1 cut(s)	723
Bse3DI	GCAATG	3 cut(s)	916, 947, 1470
BseAI	TCCGGA	2 cut(s)	289, 1178
BseBI	CCWGG	2 cut(s)	573, 685
BseDI	CCNNGG	7 cut(s)	227, 400, 606, 607, 684, 1262, 1582
BseGI	GGATG	1 cut(s)	1258
BseLI	CCNNNNNNNGG	4 cut(s)	401, 584, 668, 1244
BseMI	GCAATG	3 cut(s)	916, 947, 1470
BseMII	CTCAG	4 cut(s)	5, 309, 1140, 1230
BseNI	ACTGG	1 cut(s)	937
BsePI	GCGCGC	1 cut(s)	146
BseSI	GKGCMC	2 cut(s)	614, 929
BseXI	GCAGC	4 cut(s)	835, 1085, 1106, 1579
BsgI	GTGCAG	1 cut(s)	161
Bsh1236I	CGCG	1 cut(s)	148
Bsh1285I	CGRYCG	1 cut(s)	268
BshFI	GGCC	7 cut(s)	218, 335, 576, 612, 683, 762, 927
BsiEI	CGRYCG	1 cut(s)	268
BsiHKAI	GWGCWC	2 cut(s)	236, 1384
BsiHKCI	CYCGRG	1 cut(s)	607
BslFI	GGGAC	1 cut(s)	548
BslI	CCNNNNNNNGG	4 cut(s)	401, 584, 668, 1244
BsmAI	GTCTC	2 cut(s)	132, 1345
BsmBI	CGTCTC	1 cut(s)	1345
BsmFI	GGGAC	1 cut(s)	548
BsnI	GGCC	7 cut(s)	218, 335, 576, 612, 683, 762, 927
BsoBI	CYCGRG	1 cut(s)	607
Bsp120I	GGGCCC	2 cut(s)	610, 925
Bsp1286I	GDGCHC	4 cut(s)	236, 614, 929, 1384
Bsp13I	TCCGGA	2 cut(s)	289, 1178
Bsp143I	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
BspANI	GGCC	7 cut(s)	218, 335, 576, 612, 683, 762, 927
BspCNI	CTCAG	4 cut(s)	6, 310, 1141, 1231
BspEI	TCCGGA	2 cut(s)	289, 1178
BspFNI	CGCG	1 cut(s)	148
BspLI	GGNNCC	6 cut(s)	172, 178, 612, 694, 927, 1569
BspMAI	CTGCAG	1 cut(s)	853
BspMI	ACCTGC	1 cut(s)	865
BspPI	GGATC	3 cut(s)	168, 506, 943
BsrBI	CCGCTC	1 cut(s)	192
BsrDI	GCAATG	3 cut(s)	916, 947, 1470
BsrFI	RCCGGY	1 cut(s)	302
BsrI	ACTGG	1 cut(s)	937
BssAI	RCCGGY	1 cut(s)	302
BssECI	CCNNGG	7 cut(s)	227, 400, 606, 607, 684, 1262, 1582
BssHII	GCGCGC	1 cut(s)	146
BssMI	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
BssT1I	CCWWGG	2 cut(s)	400, 1582
Bst2UI	CCWGG	2 cut(s)	573, 685
Bst4CI	ACNGT	1 cut(s)	890
Bst6I	CTCTTC	2 cut(s)	115, 454
BstAPI	GCANNNNNTGC	1 cut(s)	857
BstDEI	CTNAG	7 cut(s)	14, 318, 723, 1140, 1149, 1239, 1614
BstDSI	CCRYGG	1 cut(s)	1262
BstF5I	GGATG	1 cut(s)	1258
BstFNI	CGCG	1 cut(s)	148
BstHHI	GCGC	2 cut(s)	148, 150
BstKTI	GATC	8 cut(s)	163, 268, 514, 548, 732, 938, 1330, 1468
BstMAI	GTCTC	2 cut(s)	132, 1345
BstMBI	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
BstMCI	CGRYCG	1 cut(s)	268
BstMWI	GCNNNNNNNGC	8 cut(s)	52, 174, 189, 231, 354, 665, 857, 1632
BstNI	CCWGG	2 cut(s)	573, 685
BstNSI	RCATGY	1 cut(s)	13
BstSCI	CCNGG	6 cut(s)	227, 571, 606, 607, 625, 683
BstSFI	CTRYAG	3 cut(s)	789, 849, 1224
BstSLI	GKGCMC	2 cut(s)	614, 929
BstUI	CGCG	1 cut(s)	148
BstV1I	GCAGC	4 cut(s)	835, 1085, 1106, 1579
BstV2I	GAAGAC	3 cut(s)	891, 950, 1548
BstX2I	RGATCY	3 cut(s)	729, 935, 1327
BstYI	RGATCY	3 cut(s)	729, 935, 1327
Bsu36I	CCTNAGG	1 cut(s)	723
BsuI	GTATCC	1 cut(s)	79
BsuRI	GGCC	7 cut(s)	218, 335, 576, 612, 683, 762, 927
BtgI	CCRYGG	1 cut(s)	1262
BtgZI	GCGATG	2 cut(s)	95, 198
BtsCI	GGATG	1 cut(s)	1258
BtsIMutI	CAGTG	1 cut(s)	895
BveI	ACCTGC	1 cut(s)	865
CaiI	CAGNNNCTG	1 cut(s)	857
CfoI	GCGC	2 cut(s)	148, 150
Cfr10I	RCCGGY	1 cut(s)	302
Cfr13I	GGNCC	7 cut(s)	250, 334, 575, 610, 611, 925, 926
Cfr9I	CCCGGG	1 cut(s)	607
Csp6I	GTAC	2 cut(s)	498, 1559
CviAII	CATG	3 cut(s)	10, 247, 1622
CviQI	GTAC	2 cut(s)	498, 1559
DdeI	CTNAG	7 cut(s)	14, 318, 723, 1140, 1149, 1239, 1614
DpnI	GATC	8 cut(s)	162, 267, 513, 547, 731, 937, 1329, 1467
DpnII	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
DraIII	CACNNNGTG	1 cut(s)	1268
EaeI	YGGCCR	1 cut(s)	760
Eam1104I	CTCTTC	2 cut(s)	115, 454
EarI	CTCTTC	2 cut(s)	115, 454
Eco130I	CCWWGG	2 cut(s)	400, 1582
Eco147I	AGGCCT	1 cut(s)	683
Eco24I	GRGCYC	2 cut(s)	614, 929
Eco32I	GATATC	1 cut(s)	1297
Eco47I	GGWCC	1 cut(s)	250
Eco57I	CTGAAG	2 cut(s)	308, 1560
Eco81I	CCTNAGG	1 cut(s)	723
Eco88I	CYCGRG	1 cut(s)	607
EcoO109I	RGGNCCY	1 cut(s)	334
EcoRII	CCWGG	2 cut(s)	571, 683
EcoRV	GATATC	1 cut(s)	1297
EcoT14I	CCWWGG	2 cut(s)	400, 1582
EcoT38I	GRGCYC	2 cut(s)	614, 929
ErhI	CCWWGG	2 cut(s)	400, 1582
Esp3I	CGTCTC	1 cut(s)	1345
FaeI	CATG	3 cut(s)	13, 250, 1625
FalI	AAGNNNNNCTT	4 cut(s)	1284, 1316, 1533, 1565
FaqI	GGGAC	1 cut(s)	548
FatI	CATG	3 cut(s)	9, 246, 1621
FauI	CCCGC	2 cut(s)	197, 513
FauNDI	CATATG	1 cut(s)	1477
Fnu4HI	GCNGC	9 cut(s)	169, 271, 300, 691, 849, 1071, 1074, 1095, 1593
FokI	GGATG	1 cut(s)	1245
FriOI	GRGCYC	2 cut(s)	614, 929
Fsp4HI	GCNGC	9 cut(s)	169, 271, 300, 691, 849, 1071, 1074, 1095, 1593
FspBI	CTAG	3 cut(s)	495, 899, 965
GlaI	GCGC	2 cut(s)	147, 149
GluI	GCNGC	9 cut(s)	169, 271, 300, 691, 849, 1071, 1074, 1095, 1593
HaeIII	GGCC	7 cut(s)	218, 335, 576, 612, 683, 762, 927
HhaI	GCGC	2 cut(s)	148, 150
Hin1II	CATG	3 cut(s)	13, 250, 1625
Hin6I	GCGC	2 cut(s)	146, 148
HinP1I	GCGC	2 cut(s)	146, 148
HincII	GTYRAC	1 cut(s)	1129
HindII	GTYRAC	1 cut(s)	1129
HinfI	GANTC	7 cut(s)	125, 630, 1046, 1361, 1448, 1482, 1618
HphI	GGTGA	4 cut(s)	374, 421, 1280, 1598
Hpy166II	GTNNAC	4 cut(s)	60, 1114, 1129, 1231
Hpy188I	TCNGA	5 cut(s)	137, 265, 319, 377, 1348
Hpy188III	TCNNGA	6 cut(s)	290, 743, 919, 1179, 1238, 1331
Hpy8I	GTNNAC	4 cut(s)	60, 1114, 1129, 1231
Hpy99I	CGWCG	1 cut(s)	512
HpyAV	CCTTC	6 cut(s)	19, 247, 538, 1138, 1211, 1237
HpyCH4III	ACNGT	1 cut(s)	890
HpyCH4IV	ACGT	1 cut(s)	1233
HpyF10VI	GCNNNNNNNGC	8 cut(s)	52, 174, 189, 231, 354, 665, 857, 1632
HpyF3I	CTNAG	7 cut(s)	14, 318, 723, 1140, 1149, 1239, 1614
HpySE526I	ACGT	1 cut(s)	1233
Hsp92II	CATG	3 cut(s)	13, 250, 1625
HspAI	GCGC	2 cut(s)	146, 148
Kpn2I	TCCGGA	2 cut(s)	289, 1178
KroI	GCCGGC	1 cut(s)	302
KroNI	GCCGGC	1 cut(s)	304
Kzo9I	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
LmnI	GCTCC	8 cut(s)	176, 182, 197, 239, 397, 698, 1316, 1387
Lsp1109I	GCAGC	4 cut(s)	835, 1085, 1106, 1579
LweI	GCATC	6 cut(s)	175, 286, 646, 655, 991, 1267
MaeI	CTAG	3 cut(s)	495, 899, 965
MaeII	ACGT	1 cut(s)	1233
MaeIII	GTNAC	2 cut(s)	1414, 1429
MalI	GATC	8 cut(s)	162, 267, 513, 547, 731, 937, 1329, 1467
MbiI	CCGCTC	1 cut(s)	192
MboI	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
MfeI	CAATTG	1 cut(s)	352
MflI	RGATCY	3 cut(s)	729, 935, 1327
MhlI	GDGCHC	4 cut(s)	236, 614, 929, 1384
MlsI	TGGCCA	1 cut(s)	762
MluCI	AATT	7 cut(s)	352, 484, 490, 697, 816, 1009, 1061
MluNI	TGGCCA	1 cut(s)	762
MlyI	GAGTC	4 cut(s)	134, 639, 1476, 1612
MmeI	TCCRAC	1 cut(s)	400
Mox20I	TGGCCA	1 cut(s)	762
MroI	TCCGGA	2 cut(s)	289, 1178
MroNI	GCCGGC	1 cut(s)	302
MscI	TGGCCA	1 cut(s)	762
MseI	TTAA	3 cut(s)	1013, 1157, 1535
MslI	CAYNNNNRTG	2 cut(s)	137, 410
Msp20I	TGGCCA	1 cut(s)	762
MspA1I	CMGCKG	3 cut(s)	55, 848, 1076
MspR9I	CCNGG	6 cut(s)	229, 573, 608, 609, 627, 685
MunI	CAATTG	1 cut(s)	352
MvaI	CCWGG	2 cut(s)	573, 685
MvnI	CGCG	1 cut(s)	148
MwoI	GCNNNNNNNGC	8 cut(s)	52, 174, 189, 231, 354, 665, 857, 1632
NaeI	GCCGGC	1 cut(s)	304
NciI	CCSGG	4 cut(s)	229, 608, 609, 627
NdeI	CATATG	1 cut(s)	1477
NdeII	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
NgoMIV	GCCGGC	1 cut(s)	302
NlaIII	CATG	3 cut(s)	13, 250, 1625
NlaIV	GGNNCC	6 cut(s)	172, 178, 612, 694, 927, 1569
NmuCI	GTSAC	1 cut(s)	1429
NspI	RCATGY	1 cut(s)	13
OliI	CACNNNNGTG	1 cut(s)	410
PaeI	GCATGC	1 cut(s)	13
PauI	GCGCGC	1 cut(s)	146
PceI	AGGCCT	1 cut(s)	683
PcsI	WCGNNNNNNNCGW	1 cut(s)	750
PdiI	GCCGGC	1 cut(s)	304
PfeI	GAWTC	3 cut(s)	1046, 1361, 1448
PkrI	GCNGC	9 cut(s)	170, 272, 301, 692, 850, 1072, 1075, 1096, 1594
Ple19I	CGATCG	1 cut(s)	268
PleI	GAGTC	4 cut(s)	133, 638, 1476, 1612
PpsI	GAGTC	4 cut(s)	133, 638, 1476, 1612
PsiI	TTATAA	1 cut(s)	801
Psp1406I	AACGTT	1 cut(s)	1233
Psp6I	CCWGG	2 cut(s)	571, 683
PspGI	CCWGG	2 cut(s)	571, 683
PspN4I	GGNNCC	6 cut(s)	172, 178, 612, 694, 927, 1569
PspOMI	GGGCCC	2 cut(s)	610, 925
PspPI	GGNCC	7 cut(s)	250, 334, 575, 610, 611, 925, 926
PstI	CTGCAG	1 cut(s)	853
PstNI	CAGNNNCTG	1 cut(s)	857
PsuI	RGATCY	3 cut(s)	729, 935, 1327
PteI	GCGCGC	1 cut(s)	146
PvuI	CGATCG	1 cut(s)	268
PvuII	CAGCTG	2 cut(s)	848, 1076
RsaI	GTAC	2 cut(s)	499, 1560
RsaNI	GTAC	2 cut(s)	498, 1559
RseI	CAYNNNNRTG	2 cut(s)	137, 410
SaqAI	TTAA	3 cut(s)	1013, 1157, 1535
SatI	GCNGC	9 cut(s)	169, 271, 300, 691, 849, 1071, 1074, 1095, 1593
Sau3AI	GATC	8 cut(s)	160, 265, 511, 545, 729, 935, 1327, 1465
Sau96I	GGNCC	7 cut(s)	250, 334, 575, 610, 611, 925, 926
SchI	GAGTC	4 cut(s)	134, 639, 1476, 1612
ScrFI	CCNGG	6 cut(s)	229, 573, 608, 609, 627, 685
SduI	GDGCHC	4 cut(s)	236, 614, 929, 1384
SfaNI	GCATC	6 cut(s)	175, 286, 646, 655, 991, 1267
SfcI	CTRYAG	3 cut(s)	789, 849, 1224
SinI	GGWCC	1 cut(s)	250
SmaI	CCCGGG	1 cut(s)	609
SmiMI	CAYNNNNRTG	2 cut(s)	137, 410
SmlI	CTYRAG	1 cut(s)	63
SmoI	CTYRAG	1 cut(s)	63
SphI	GCATGC	1 cut(s)	13
Sse9I	AATT	7 cut(s)	352, 484, 490, 697, 816, 1009, 1061
SseBI	AGGCCT	1 cut(s)	683
SspI	AATATT	3 cut(s)	103, 1053, 1515
SspMI	CTAG	3 cut(s)	495, 899, 965
StuI	AGGCCT	1 cut(s)	683
StyD4I	CCNGG	6 cut(s)	227, 571, 606, 607, 625, 683
StyI	CCWWGG	2 cut(s)	400, 1582
TaaI	ACNGT	1 cut(s)	890
TaiI	ACGT	1 cut(s)	1236
TaqI	TCGA	2 cut(s)	744, 970
TasI	AATT	7 cut(s)	352, 484, 490, 697, 816, 1009, 1061
TauI	GCSGC	5 cut(s)	171, 273, 302, 693, 1073
TfiI	GAWTC	3 cut(s)	1046, 1361, 1448
Tru1I	TTAA	3 cut(s)	1013, 1157, 1535
Tru9I	TTAA	3 cut(s)	1013, 1157, 1535
TscAI	CASTG	1 cut(s)	895
TseFI	GTSAC	1 cut(s)	1429
TseI	GCWGC	4 cut(s)	848, 1073, 1094, 1592
Tsp45I	GTSAC	1 cut(s)	1429
TspDTI	ATGAA	2 cut(s)	95, 1137
TspGWI	ACGGA	2 cut(s)	1580, 1617
TspMI	CCCGGG	1 cut(s)	607
TspRI	CASTG	1 cut(s)	895
VpaK11BI	GGWCC	1 cut(s)	250
XapI	RAATTY	2 cut(s)	816, 1009
XceI	RCATGY	1 cut(s)	13
XmaI	CCCGGG	1 cut(s)	607
XspI	CTAG	3 cut(s)	495, 899, 965

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.