AT1G35670

calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
13205345 .. 13208289
2945 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G35670.1

Sequence Viewer

Length: 1488 bp
ATGGAGACGAAGCCAAACCCTAGACGTCCTTCAAACACAGTTCTACCATATCAAACACCACGATTAAGAGATCATTACCTTCTGGGAAAAAAGCTAGGCCAAGGCCAATTTGGAACAACCTATCTCTGCACAGAGAAATCAACCTCCGCTAATTACGCCTGCAAATCGATCCCGAAGCGAAAGCTCGTGTGTCGCGAGGATTACGAAGATGTATGGCGTGAGATTCAGATCATGCATCATCTCTCTGAGCATCCAAATGTTGTTAGGATCAAAGGGACTTATGAAGATTCGGTGTTTGTTCATATTGTTATGGAGGTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTTCTAAAGGTCATTTTAGTGAGCGTGAAGCTGTCAAGCTTATTAAGACGATTCTTGGTGTTGTTGAGGCTTGTCATTCTCTTGGTGTTATGCATAGAGATCTCAAACCTGAGAATTTCTTGTTTGATAGTCCTAAAGATGATGCTAAGCTTAAGGCTACCGATTTTGGTTTGTCTGTCTTCTATAAGCCAGGACAATATTTATATGACGTAGTTGGAAGTCCGTACTATGTTGCACCAGAGGTGCTAAAGAAATGTTATGGACCTGAAATAGATGTGTGGAGTGCTGGTGTTATCCTCTACATTTTACTCAGCGGTGTTCCTCCCTTCTGGGCAGAGACTGAGTCTGGAATCTTTAGACAGATATTGCAAGGGAAGTTAGATTTCAAATCTGACCCGTGGCCTACTATCTCAGAAGCTGCTAAAGATTTGATCTATAAAATGCTCGAAAGGAGCCCCAAGAAACGCATTTCTGCTCATGAAGCCTTGTGTCACCCATGGATTGTCGATGAACAAGCAGCACCAGACAAGCCTCTTGATCCAGCAGTCTTATCTCGTCTAAAGCAGTTTTCTCAAATGAATAAGATTAAGAAAATGGCATTACGGGTAATTGCTGAGAGACTTTCAGAGGAAGAAATTGGAGGTCTGAAGGAATTGTTCAAGATGATAGACACAGACAACAGCGGAACGATTACTTTTGAAGAGCTCAAAGCGGGTTTGAAGAGAGTCGGATCTGAACTGATGGAATCAGAAATCAAGTCTCTCATGGATGCGGCTGATATCGACAACAGTGGTACAATAGACTACGGAGAATTCCTAGCAGCAACCTTACACATGAACAAGATGGAGAGAGAGGAGAATCTGGTGGCTGCATTTTCGTACTTTGACAAAGACGGAAGCGGTTATATCACCATCGATGAGCTTCAGTCAGCTTGCACAGAGTTTGGTCTATGTGATACACCTCTGGACGACATGATCAAGGAGATTGATCTTGACAATGACGGGAAGATCGATTTCTCGGAGTTTACAGCAATGATGAGGAAAGGAGATGGAGTTGGGAGAAGCAGAACCATGATGAAGAACTTGAACTTCAACATTGCTGATGCTTTTGGAGTTGATGGTGAAAAATCTGATGACTGA

Protein Analysis

495

Amino Acids

55.92

Weight (kDa)

5.27

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 28 - 284 7.2e-79 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 29 - 276 1.4e-26 Protein tyrosine and serine/threonine kinase
EF-hand_1 PF00036 332 - 358 4.4e-08 EF hand domain
EF-hand_7 PF13499 332 - 392 2.3e-12 EF-hand domain pair
EF-hand_6 PF13405 332 - 360 1.1e-07 EF-hand domain
EF-hand_5 PF13202 332 - 354 3.4e-06 EF hand
EF-hand_8 PF13833 345 - 391 2.5e-06 EF-hand domain pair
EF-hand_7 PF13499 402 - 463 1.4e-15 EF-hand domain pair
EF-hand_6 PF13405 404 - 432 6.5e-07 EF-hand domain
EF-hand_1 PF00036 406 - 430 1.7e-06 EF hand domain
EF-hand_1 PF00036 438 - 464 5.3e-08 EF hand domain
EF-hand_8 PF13833 438 - 464 2.7e-06 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011632)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 28
AccII CGCG 1 cut(s) 195
AciI CCGC 6 cut(s) 147, 663, 1032, 1061, 1121, 1248
AclWI GGATC 4 cut(s) 163, 275, 881, 1087
AcsI RAATTY 2 cut(s) 463, 1160
AcuI CTGAAG 2 cut(s) 1016, 1256
AcyI GRCGYC 1 cut(s) 25
AfaI GTAC 3 cut(s) 575, 1144, 1229
AflII CTTAAG 1 cut(s) 500
AgsI TTSAA 7 cut(s) 33, 736, 1009, 1049, 1069, 1435, 1441
AjnI CCWGG 1 cut(s) 538
Alw21I GWGCWC 1 cut(s) 1056
Alw26I GTCTC 3 cut(s) 680, 961, 1113
AlwI GGATC 4 cut(s) 163, 275, 881, 1087
AlwNI CAGNNNCTG 2 cut(s) 689, 767
AoxI GGCC 3 cut(s) 97, 103, 749
ApeKI GCWGC 4 cut(s) 767, 866, 1169, 1217
ApoI RAATTY 2 cut(s) 463, 1160
AspS9I GGNCC 1 cut(s) 611
AsuHPI GGTGA 4 cut(s) 341, 833, 1249, 1481
AvaII GGWCC 1 cut(s) 611
BanII GRGCYC 2 cut(s) 806, 1056
BauI CACGAG 1 cut(s) 185
BbsI GAAGAC 1 cut(s) 520
Bbv12I GWGCWC 1 cut(s) 1056
BbvI GCAGC 4 cut(s) 754, 878, 1181, 1204
BccI CCATC 5 cut(s) 1084, 1186, 1268, 1391, 1460
BciT130I CCWGG 1 cut(s) 540
BclI TGATCA 1 cut(s) 1323
BcoDI GTCTC 3 cut(s) 680, 961, 1113
BfaI CTAG 3 cut(s) 21, 95, 1166
BfrI CTTAAG 1 cut(s) 500
BglII AGATCT 1 cut(s) 448
BisI GCNGC 5 cut(s) 768, 867, 1122, 1170, 1218
BlpI GCTNAGC 1 cut(s) 495
BlsI GCNGC 5 cut(s) 769, 868, 1123, 1171, 1219
Bme1390I CCNGG 1 cut(s) 540
Bme18I GGWCC 1 cut(s) 611
BmgT120I GGNCC 1 cut(s) 611
BmiI GGNNCC 1 cut(s) 803
BmrFI CCNGG 1 cut(s) 540
BmsI GCATC 5 cut(s) 244, 259, 481, 1108, 1441
BpiI GAAGAC 1 cut(s) 520
Bpu1102I GCTNAGC 1 cut(s) 495
Bsa29I ATCGAT 3 cut(s) 167, 1263, 1359
BsaBI GATNNNNATC 1 cut(s) 227
BsaHI GRCGYC 1 cut(s) 25
BsaJI CCNNGG 3 cut(s) 100, 746, 845
BsaXI ACNNNNNCTCC 4 cut(s) 622, 652, 1386, 1416
Bse3DI GCAATG 2 cut(s) 1386, 1443
Bse8I GATNNNNATC 1 cut(s) 227
BseBI CCWGG 1 cut(s) 540
BseCI ATCGAT 3 cut(s) 167, 1263, 1359
BseDI CCNNGG 3 cut(s) 100, 746, 845
BseGI GGATG 2 cut(s) 250, 1123
BseJI GATNNNNATC 1 cut(s) 227
BseMI GCAATG 2 cut(s) 1386, 1443
BseMII CTCAG 6 cut(s) 237, 450, 673, 681, 774, 954
BseRI GAGGAG 1 cut(s) 1217
BseXI GCAGC 4 cut(s) 754, 878, 1181, 1204
BsgI GTGCAG 1 cut(s) 112
Bsh1236I CGCG 1 cut(s) 195
BshFI GGCC 3 cut(s) 99, 105, 751
BshVI ATCGAT 3 cut(s) 167, 1263, 1359
BsiHKAI GWGCWC 1 cut(s) 1056
BslFI GGGAC 1 cut(s) 289
BsmAI GTCTC 3 cut(s) 680, 961, 1113
BsmFI GGGAC 1 cut(s) 289
BsnI GGCC 3 cut(s) 99, 105, 751
Bsp1286I GDGCHC 2 cut(s) 806, 1056
Bsp1720I GCTNAGC 1 cut(s) 495
Bsp19I CCATGG 1 cut(s) 845
Bsp68I TCGCGA 1 cut(s) 195
BspACI CCGC 6 cut(s) 147, 663, 1032, 1061, 1121, 1248
BspANI GGCC 3 cut(s) 99, 105, 751
BspCNI CTCAG 6 cut(s) 238, 451, 672, 682, 773, 955
BspDI ATCGAT 3 cut(s) 167, 1263, 1359
BspFNI CGCG 1 cut(s) 195
BspHI TCATGA 1 cut(s) 826
BspLI GGNNCC 1 cut(s) 803
BspPI GGATC 4 cut(s) 163, 275, 881, 1087
BspQI GCTCTTC 1 cut(s) 1044
BspTI CTTAAG 1 cut(s) 500
BsrDI GCAATG 2 cut(s) 1386, 1443
BssECI CCNNGG 3 cut(s) 100, 746, 845
BssNI GRCGYC 1 cut(s) 25
BssSI CACGAG 1 cut(s) 185
BssT1I CCWWGG 2 cut(s) 100, 845
Bst2BI CACGAG 1 cut(s) 185
Bst2UI CCWGG 1 cut(s) 540
Bst4CI ACNGT 2 cut(s) 40, 1139
Bst6I CTCTTC 2 cut(s) 1044, 1064
BstACI GRCGYC 1 cut(s) 25
BstAFI CTTAAG 1 cut(s) 500
BstC8I GCNNGC 2 cut(s) 160, 1282
BstDEI CTNAG 7 cut(s) 246, 459, 495, 659, 690, 760, 963
BstDSI CCRYGG 2 cut(s) 746, 845
BstF5I GGATG 2 cut(s) 250, 1123
BstFNI CGCG 1 cut(s) 195
BstMAI GTCTC 3 cut(s) 680, 961, 1113
BstMWI GCNNNNNNNGC 2 cut(s) 155, 830
BstNI CCWGG 1 cut(s) 540
BstSCI CCNGG 1 cut(s) 538
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 4 cut(s) 754, 878, 1181, 1204
BstV2I GAAGAC 1 cut(s) 520
BstX2I RGATCY 2 cut(s) 448, 1079
BstYI RGATCY 2 cut(s) 448, 1079
Bsu15I ATCGAT 3 cut(s) 167, 1263, 1359
BsuRI GGCC 3 cut(s) 99, 105, 751
BsuTUI ATCGAT 3 cut(s) 167, 1263, 1359
BtgI CCRYGG 2 cut(s) 746, 845
BtsCI GGATG 2 cut(s) 250, 1123
BtsIMutI CAGTG 1 cut(s) 1144
BtuMI TCGCGA 1 cut(s) 195
Cac8I GCNNGC 2 cut(s) 160, 1282
CaiI CAGNNNCTG 2 cut(s) 689, 767
CciI TCATGA 1 cut(s) 826
Cfr13I GGNCC 1 cut(s) 611
ClaI ATCGAT 3 cut(s) 167, 1263, 1359
Csp6I GTAC 3 cut(s) 574, 1143, 1228
CviAII CATG 7 cut(s) 232, 827, 846, 1114, 1183, 1321, 1420
CviQI GTAC 3 cut(s) 574, 1143, 1228
DdeI CTNAG 7 cut(s) 246, 459, 495, 659, 690, 760, 963
Eam1104I CTCTTC 2 cut(s) 1044, 1064
EarI CTCTTC 2 cut(s) 1044, 1064
Ecl136II GAGCTC 1 cut(s) 1054
Eco130I CCWWGG 2 cut(s) 100, 845
Eco24I GRGCYC 2 cut(s) 806, 1056
Eco32I GATATC 1 cut(s) 1129
Eco47I GGWCC 1 cut(s) 611
Eco53kI GAGCTC 1 cut(s) 1054
Eco57I CTGAAG 2 cut(s) 1016, 1256
EcoICRI GAGCTC 1 cut(s) 1054
EcoRI GAATTC 1 cut(s) 1160
EcoRII CCWGG 1 cut(s) 538
EcoRV GATATC 1 cut(s) 1129
EcoT14I CCWWGG 2 cut(s) 100, 845
EcoT22I ATGCAT 2 cut(s) 237, 444
EcoT38I GRGCYC 2 cut(s) 806, 1056
ErhI CCWWGG 2 cut(s) 100, 845
FaeI CATG 7 cut(s) 235, 830, 849, 1117, 1186, 1324, 1423
FaqI GGGAC 1 cut(s) 289
FatI CATG 7 cut(s) 231, 826, 845, 1113, 1182, 1320, 1419
FauI CCCGC 1 cut(s) 1054
FbaI TGATCA 1 cut(s) 1323
Fnu4HI GCNGC 5 cut(s) 768, 867, 1122, 1170, 1218
FokI GGATG 2 cut(s) 237, 1130
FriOI GRGCYC 2 cut(s) 806, 1056
Fsp4HI GCNGC 5 cut(s) 768, 867, 1122, 1170, 1218
FspBI CTAG 3 cut(s) 21, 95, 1166
GluI GCNGC 5 cut(s) 768, 867, 1122, 1170, 1218
HaeIII GGCC 3 cut(s) 99, 105, 751
Hin1I GRCGYC 1 cut(s) 25
Hin1II CATG 7 cut(s) 235, 830, 849, 1117, 1186, 1324, 1423
HindIII AAGCTT 2 cut(s) 386, 497
HinfI GANTC 8 cut(s) 223, 287, 400, 692, 699, 1074, 1094, 1207
HphI GGTGA 4 cut(s) 341, 833, 1249, 1481
Hpy166II GTNNAC 1 cut(s) 1374
Hpy188III TCNNGA 8 cut(s) 172, 194, 696, 827, 884, 1009, 1313, 1340
Hpy8I GTNNAC 1 cut(s) 1374
HpyAV CCTTC 5 cut(s) 39, 89, 317, 685, 991
HpyCH4III ACNGT 2 cut(s) 40, 1139
HpyCH4IV ACGT 2 cut(s) 25, 558
HpyCH4V TGCA 8 cut(s) 129, 162, 235, 442, 584, 718, 1220, 1284
HpyF10VI GCNNNNNNNGC 2 cut(s) 155, 830
HpyF3I CTNAG 7 cut(s) 246, 459, 495, 659, 690, 760, 963
HpySE526I ACGT 2 cut(s) 25, 558
Hsp92I GRCGYC 1 cut(s) 25
Hsp92II CATG 7 cut(s) 235, 830, 849, 1117, 1186, 1324, 1423
Ksp22I TGATCA 1 cut(s) 1323
LguI GCTCTTC 1 cut(s) 1044
LmnI GCTCC 1 cut(s) 801
Lsp1109I GCAGC 4 cut(s) 754, 878, 1181, 1204
LweI GCATC 5 cut(s) 244, 259, 481, 1108, 1441
MaeI CTAG 3 cut(s) 21, 95, 1166
MaeII ACGT 2 cut(s) 25, 558
MaeIII GTNAC 1 cut(s) 839
MboII GAAGA 8 cut(s) 218, 296, 520, 992, 1061, 1081, 1366, 1438
MflI RGATCY 2 cut(s) 448, 1079
MhlI GDGCHC 2 cut(s) 806, 1056
MluCI AATT 7 cut(s) 107, 151, 463, 957, 984, 1001, 1160
MlyI GAGTC 2 cut(s) 701, 1083
MmeI TCCRAC 2 cut(s) 544, 1057
Mph1103I ATGCAT 2 cut(s) 237, 444
MseI TTAA 4 cut(s) 65, 393, 501, 936
MslI CAYNNNNRTG 2 cut(s) 255, 366
MspA1I CMGCKG 2 cut(s) 663, 1032
MspCI CTTAAG 1 cut(s) 500
MspR9I CCNGG 1 cut(s) 540
MvaI CCWGG 1 cut(s) 540
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 2 cut(s) 155, 830
NcoI CCATGG 1 cut(s) 845
NlaIII CATG 7 cut(s) 235, 830, 849, 1117, 1186, 1324, 1423
NlaIV GGNNCC 1 cut(s) 803
NmuCI GTSAC 1 cut(s) 839
NruI TCGCGA 1 cut(s) 195
NsiI ATGCAT 2 cut(s) 237, 444
PagI TCATGA 1 cut(s) 826
PciSI GCTCTTC 1 cut(s) 1044
PcsI WCGNNNNNNNCGW 2 cut(s) 192, 1356
PfeI GAWTC 6 cut(s) 223, 287, 400, 699, 1094, 1207
PflFI GACNNNGTC 1 cut(s) 691
PkrI GCNGC 5 cut(s) 769, 868, 1123, 1171, 1219
PleI GAGTC 2 cut(s) 700, 1082
PpsI GAGTC 2 cut(s) 700, 1082
Psp124BI GAGCTC 1 cut(s) 1056
Psp6I CCWGG 1 cut(s) 538
PspGI CCWGG 1 cut(s) 538
PspN4I GGNNCC 1 cut(s) 803
PspPI GGNCC 1 cut(s) 611
PstNI CAGNNNCTG 2 cut(s) 689, 767
PsuI RGATCY 2 cut(s) 448, 1079
PsyI GACNNNGTC 1 cut(s) 691
RruI TCGCGA 1 cut(s) 195
RsaI GTAC 3 cut(s) 575, 1144, 1229
RsaNI GTAC 3 cut(s) 574, 1143, 1228
RseI CAYNNNNRTG 2 cut(s) 255, 366
SacI GAGCTC 1 cut(s) 1056
SapI GCTCTTC 1 cut(s) 1044
SaqAI TTAA 4 cut(s) 65, 393, 501, 936
SatI GCNGC 5 cut(s) 768, 867, 1122, 1170, 1218
Sau96I GGNCC 1 cut(s) 611
SchI GAGTC 2 cut(s) 701, 1083
ScrFI CCNGG 1 cut(s) 540
SduI GDGCHC 2 cut(s) 806, 1056
SfaNI GCATC 5 cut(s) 244, 259, 481, 1108, 1441
SinI GGWCC 1 cut(s) 611
SmiMI CAYNNNNRTG 2 cut(s) 255, 366
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
Sse9I AATT 7 cut(s) 107, 151, 463, 957, 984, 1001, 1160
SsiI CCGC 6 cut(s) 147, 663, 1032, 1061, 1121, 1248
SspI AATATT 1 cut(s) 548
SspMI CTAG 3 cut(s) 21, 95, 1166
SstI GAGCTC 1 cut(s) 1056
StyD4I CCNGG 1 cut(s) 538
StyI CCWWGG 2 cut(s) 100, 845
TaaI ACNGT 2 cut(s) 40, 1139
TaiI ACGT 2 cut(s) 28, 561
TaqI TCGA 6 cut(s) 167, 795, 855, 1131, 1263, 1359
TasI AATT 7 cut(s) 107, 151, 463, 957, 984, 1001, 1160
TauI GCSGC 1 cut(s) 1124
TfiI GAWTC 6 cut(s) 223, 287, 400, 699, 1094, 1207
Tru1I TTAA 4 cut(s) 65, 393, 501, 936
Tru9I TTAA 4 cut(s) 65, 393, 501, 936
TscAI CASTG 1 cut(s) 1144
TseFI GTSAC 1 cut(s) 839
TseI GCWGC 4 cut(s) 767, 866, 1169, 1217
Tsp45I GTSAC 1 cut(s) 839
TspDTI ATGAA 7 cut(s) 290, 297, 843, 873, 941, 1199, 1439
TspGWI ACGGA 3 cut(s) 561, 1170, 1257
TspRI CASTG 1 cut(s) 1144
Tth111I GACNNNGTC 1 cut(s) 691
Vha464I CTTAAG 1 cut(s) 500
VpaK11BI GGWCC 1 cut(s) 611
XapI RAATTY 2 cut(s) 463, 1160
XcmI CCANNNNNNNNNTGG 1 cut(s) 107
XspI CTAG 3 cut(s) 21, 95, 1166
ZraI GACGTC 1 cut(s) 26
Zsp2I ATGCAT 2 cut(s) 237, 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.