AT4G09570

calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
6049441 .. 6052380
2940 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G09570.1

Sequence Viewer

Length: 1506 bp
ATGGAGAAACCAAACCCTAGAAGACCCTCAAACAGTGTTCTTCCATACGAAACACCAAGATTAAGAGATCACTATCTCCTCGGCAAAAAGCTAGGCCAAGGCCAATTTGGAACAACCTATCTCTGTACAGAGAAATCATCATCAGCTAATTACGCTTGCAAATCAATCCCAAAACGTAAGCTTGTATGTCGTGAAGACTACGAAGATGTATGGCGTGAGATTCAGATCATGCATCATCTCTCTGAGCATCCTAATGTTGTTAGAATCAAGGGTACTTATGAAGACTCTGTTTTTGTTCACATTGTTATGGAAGTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTTCTAAAGGGTGTTTTAGTGAACGTGAAGCTGCTAAGTTGATTAAGACTATTCTTGGTGTTGTTGAGGCTTGTCATTCTCTTGGTGTTATGCATAGAGATCTTAAGCCTGAGAATTTCTTGTTTGATAGTCCCAGTGATGATGCTAAGCTTAAAGCTACAGACTTTGGTTTGTCTGTCTTCTACAAGCCAGGGCAGTATCTGTATGATGTAGTTGGAAGTCCGTATTATGTTGCACCTGAGGTTCTGAAGAAATGTTATGGACCAGAGATAGACGTGTGGAGCGCCGGTGTTATCTTGTACATCTTACTAAGTGGGGTTCCTCCTTTTTGGGCAGAAACCGAGTCAGGAATCTTTAGGCAGATATTGCAAGGGAAGATAGATTTTAAATCTGATCCGTGGCCTACTATCTCAGAAGGTGCTAAAGATTTGATTTACAAAATGCTCGATAGGAGCCCCAAGAAACGTATTTCTGCACATGAAGCATTGTGTCACCCTTGGATTGTTGATGAACATGCTGCACCAGACAAGCCTCTCGACCCAGCAGTCTTGTCGCGACTTAAGCAGTTCTCGCAAATGAATAAAATCAAGAAAATGGCCTTACGAGTAATCGCGGAGAGACTCTCGGAGGAAGAGATTGGTGGTCTGAAGGAATTGTTCAAAATGATAGATACAGACAACAGTGGAACAATCACCTTTGAAGAGCTTAAAGCAGGTCTAAAGAGAGTTGGATCTGAATTGATGGAATCAGAAATCAAGTCTCTTATGGATGCGGCGGATATAGACAACAGTGGGACAATAGACTACGGTGAATTCCTAGCAGCGACATTACATATAAACAAGATGGAGAGAGAAGAGAACTTGGTGGTTGCGTTTTCATACTTTGATAAAGATGGTAGCGGTTATATCACCATTGACGAGCTTCAACAAGCCTGCACAGAGTTTGGTCTCTGTGACACTCCTCTTGATGACATGATCAAAGAGATTGATCTTGATAATGACGGGAAGATTGATTTCTCAGAGTTTACTGCTATGATGAAGAAAGGAGATGGTGTTGGGAGGAGCAGAACTATGAGGAACAACTTGAACTTCAATATAGCTGAAGCTTTTGGAGTTGAGGACACAAGCAGCACTGCTAAATCTGATGATTCACCAAAGTAA

Protein Analysis

501

Amino Acids

56.42

Weight (kDa)

5.22

Isoelectric Point (pI)

46.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 27 - 283 2.4e-78 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 28 - 275 2.4e-25 Protein tyrosine and serine/threonine kinase
EF-hand_1 PF00036 331 - 357 4.5e-08 EF hand domain
EF-hand_7 PF13499 331 - 391 2.3e-12 EF-hand domain pair
EF-hand_6 PF13405 331 - 359 1.1e-07 EF-hand domain
EF-hand_5 PF13202 331 - 353 3.5e-06 EF hand
EF-hand_7 PF13499 401 - 462 2.9e-15 EF-hand domain pair
EF-hand_6 PF13405 403 - 431 3.9e-07 EF-hand domain
EF-hand_1 PF00036 406 - 429 1.8e-06 EF hand domain
EF-hand_1 PF00036 437 - 463 5.4e-08 EF hand domain
EF-hand_8 PF13833 437 - 463 1.9e-06 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011632)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 890
Acc36I ACCTGC 1 cut(s) 1049
AccII CGCG 2 cut(s) 901, 959
AciI CCGC 4 cut(s) 959, 1118, 1121, 1245
AclWI GGATC 2 cut(s) 734, 1084
AcsI RAATTY 2 cut(s) 460, 1157
AcuI CTGAAG 3 cut(s) 614, 1013, 1467
AfaI GTAC 3 cut(s) 127, 274, 647
AflII CTTAAG 2 cut(s) 449, 905
AflIII ACRYGT 1 cut(s) 621
AgsI TTSAA 5 cut(s) 1006, 1046, 1271, 1432, 1438
AjiI CACGTC 1 cut(s) 622
AjnI CCWGG 1 cut(s) 535
Alw26I GTCTC 3 cut(s) 958, 1110, 1298
AlwI GGATC 2 cut(s) 734, 1084
AlwNI CAGNNNCTG 1 cut(s) 547
AoxI GGCC 4 cut(s) 94, 100, 746, 942
ApeKI GCWGC 4 cut(s) 377, 863, 1166, 1473
ApoI RAATTY 2 cut(s) 460, 1157
ArsI GACNNNNNNTTYG 2 cut(s) 275, 307
AspLEI GCGC 1 cut(s) 632
AspS9I GGNCC 1 cut(s) 608
AsuHPI GGTGA 6 cut(s) 338, 830, 1030, 1166, 1246, 1488
AvaII GGWCC 1 cut(s) 608
AxyI CCTNAGG 1 cut(s) 585
BanII GRGCYC 1 cut(s) 803
BbsI GAAGAC 4 cut(s) 28, 201, 288, 517
BbvI GCAGC 4 cut(s) 364, 850, 1178, 1485
BccI CCATC 4 cut(s) 1081, 1183, 1232, 1388
BcgI CGANNNNNNTGC 2 cut(s) 879, 913
BciT130I CCWGG 1 cut(s) 537
BclI TGATCA 1 cut(s) 1320
BcoDI GTCTC 3 cut(s) 958, 1110, 1298
BfaI CTAG 3 cut(s) 18, 92, 1163
BfmI CTRYAG 1 cut(s) 504
BfoI RGCGCY 1 cut(s) 633
BfrI CTTAAG 2 cut(s) 449, 905
BfuAI ACCTGC 1 cut(s) 1049
BglII AGATCT 1 cut(s) 445
BisI GCNGC 5 cut(s) 378, 864, 1119, 1167, 1474
BlpI GCTNAGC 1 cut(s) 492
BlsI GCNGC 5 cut(s) 379, 865, 1120, 1168, 1475
Bme1390I CCNGG 1 cut(s) 537
Bme18I GGWCC 1 cut(s) 608
BmgBI CACGTC 1 cut(s) 622
BmgT120I GGNCC 1 cut(s) 608
BmiI GGNNCC 2 cut(s) 666, 800
BmrFI CCNGG 1 cut(s) 537
BmrI ACTGGG 1 cut(s) 474
BmsI GCATC 4 cut(s) 241, 256, 478, 1105
BmuI ACTGGG 1 cut(s) 474
BpiI GAAGAC 4 cut(s) 28, 201, 288, 517
BplI GAGNNNNNCTC 2 cut(s) 953, 985
Bpu1102I GCTNAGC 1 cut(s) 492
BsaBI GATNNNNATC 2 cut(s) 72, 224
BsaI GGTCTC 1 cut(s) 1298
BsaJI CCNNGG 5 cut(s) 79, 97, 536, 743, 842
BsaXI ACNNNNNCTCC 4 cut(s) 619, 649, 1383, 1413
Bse118I RCCGGY 1 cut(s) 632
Bse1I ACTGG 1 cut(s) 480
Bse21I CCTNAGG 1 cut(s) 585
Bse8I GATNNNNATC 2 cut(s) 72, 224
BseBI CCWGG 1 cut(s) 537
BseDI CCNNGG 5 cut(s) 79, 97, 536, 743, 842
BseGI GGATG 2 cut(s) 247, 1120
BseJI GATNNNNATC 2 cut(s) 72, 224
BseMII CTCAG 5 cut(s) 234, 447, 576, 771, 1377
BseNI ACTGG 1 cut(s) 480
BseRI GAGGAG 3 cut(s) 68, 1296, 1420
BseXI GCAGC 4 cut(s) 364, 850, 1178, 1485
BseYI CCCAGC 1 cut(s) 886
BsgI GTGCAG 3 cut(s) 804, 849, 1264
Bsh1236I CGCG 2 cut(s) 901, 959
BshFI GGCC 4 cut(s) 96, 102, 748, 944
BsiSI CCGG 1 cut(s) 633
BslFI GGGAC 2 cut(s) 462, 1153
BsmAI GTCTC 3 cut(s) 958, 1110, 1298
BsmFI GGGAC 2 cut(s) 462, 1153
BsnI GGCC 4 cut(s) 96, 102, 748, 944
Bso31I GGTCTC 1 cut(s) 1298
Bsp1286I GDGCHC 1 cut(s) 803
Bsp1407I TGTACA 2 cut(s) 125, 645
Bsp143I GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
Bsp1720I GCTNAGC 1 cut(s) 492
Bsp68I TCGCGA 1 cut(s) 901
BspACI CCGC 4 cut(s) 959, 1118, 1121, 1245
BspANI GGCC 4 cut(s) 96, 102, 748, 944
BspCNI CTCAG 5 cut(s) 235, 448, 577, 770, 1376
BspFNI CGCG 2 cut(s) 901, 959
BspLI GGNNCC 2 cut(s) 666, 800
BspMI ACCTGC 1 cut(s) 1049
BspPI GGATC 2 cut(s) 734, 1084
BspQI GCTCTTC 1 cut(s) 1041
BspTI CTTAAG 2 cut(s) 449, 905
BspTNI GGTCTC 1 cut(s) 1298
BsrFI RCCGGY 1 cut(s) 632
BsrGI TGTACA 2 cut(s) 125, 645
BsrI ACTGG 1 cut(s) 480
BssAI RCCGGY 1 cut(s) 632
BssECI CCNNGG 5 cut(s) 79, 97, 536, 743, 842
BssMI GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
BssT1I CCWWGG 2 cut(s) 97, 842
Bst2UI CCWGG 1 cut(s) 537
Bst4CI ACNGT 4 cut(s) 35, 1028, 1136, 1154
Bst6I CTCTTC 3 cut(s) 972, 1041, 1194
BstAFI CTTAAG 2 cut(s) 449, 905
BstAPI GCANNNNNTGC 1 cut(s) 712
BstAUI TGTACA 2 cut(s) 125, 645
BstC8I GCNNGC 2 cut(s) 157, 1279
BstDEI CTNAG 8 cut(s) 243, 381, 456, 492, 585, 656, 757, 1363
BstDSI CCRYGG 1 cut(s) 743
BstF5I GGATG 2 cut(s) 247, 1120
BstFNI CGCG 2 cut(s) 901, 959
BstH2I RGCGCY 1 cut(s) 633
BstHHI GCGC 1 cut(s) 632
BstKTI GATC 8 cut(s) 70, 228, 340, 448, 742, 1079, 1323, 1336
BstMAI GTCTC 3 cut(s) 958, 1110, 1298
BstMBI GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
BstMWI GCNNNNNNNGC 5 cut(s) 152, 712, 827, 907, 916
BstNI CCWGG 1 cut(s) 537
BstNSI RCATGY 1 cut(s) 863
BstSCI CCNGG 1 cut(s) 535
BstSFI CTRYAG 1 cut(s) 504
BstUI CGCG 2 cut(s) 901, 959
BstV1I GCAGC 4 cut(s) 364, 850, 1178, 1485
BstV2I GAAGAC 4 cut(s) 28, 201, 288, 517
BstX2I RGATCY 2 cut(s) 445, 1076
BstYI RGATCY 2 cut(s) 445, 1076
Bsu36I CCTNAGG 1 cut(s) 585
BsuRI GGCC 4 cut(s) 96, 102, 748, 944
BtgI CCRYGG 1 cut(s) 743
BtrI CACGTC 1 cut(s) 622
BtsCI GGATG 2 cut(s) 247, 1120
BtsI GCAGTG 1 cut(s) 1476
BtsIMutI CAGTG 5 cut(s) 40, 487, 1033, 1141, 1476
BtuMI TCGCGA 1 cut(s) 901
BveI ACCTGC 1 cut(s) 1049
Cac8I GCNNGC 2 cut(s) 157, 1279
CaiI CAGNNNCTG 1 cut(s) 547
CfoI GCGC 1 cut(s) 632
Cfr10I RCCGGY 1 cut(s) 632
Cfr13I GGNCC 1 cut(s) 608
Csp6I GTAC 3 cut(s) 126, 273, 646
CviAII CATG 4 cut(s) 229, 824, 860, 1318
CviQI GTAC 3 cut(s) 126, 273, 646
DdeI CTNAG 8 cut(s) 243, 381, 456, 492, 585, 656, 757, 1363
DpnI GATC 8 cut(s) 69, 227, 339, 447, 741, 1078, 1322, 1335
DpnII GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
DraI TTTAAA 1 cut(s) 733
DrdI GACNNNNNNGTC 1 cut(s) 890
DseDI GACNNNNNNGTC 1 cut(s) 890
Eam1104I CTCTTC 3 cut(s) 972, 1041, 1194
EarI CTCTTC 3 cut(s) 972, 1041, 1194
EciI GGCGGA 1 cut(s) 1136
Eco130I CCWWGG 2 cut(s) 97, 842
Eco24I GRGCYC 1 cut(s) 803
Eco31I GGTCTC 1 cut(s) 1298
Eco47I GGWCC 1 cut(s) 608
Eco57I CTGAAG 3 cut(s) 614, 1013, 1467
Eco81I CCTNAGG 1 cut(s) 585
EcoRI GAATTC 1 cut(s) 1157
EcoRII CCWGG 1 cut(s) 535
EcoT14I CCWWGG 2 cut(s) 97, 842
EcoT22I ATGCAT 2 cut(s) 234, 441
EcoT38I GRGCYC 1 cut(s) 803
ErhI CCWWGG 2 cut(s) 97, 842
FaeI CATG 4 cut(s) 232, 827, 863, 1321
FaqI GGGAC 2 cut(s) 462, 1153
FatI CATG 4 cut(s) 228, 823, 859, 1317
FbaI TGATCA 1 cut(s) 1320
Fnu4HI GCNGC 5 cut(s) 378, 864, 1119, 1167, 1474
FokI GGATG 2 cut(s) 234, 1127
FriOI GRGCYC 1 cut(s) 803
Fsp4HI GCNGC 5 cut(s) 378, 864, 1119, 1167, 1474
FspBI CTAG 3 cut(s) 18, 92, 1163
GlaI GCGC 1 cut(s) 631
GluI GCNGC 5 cut(s) 378, 864, 1119, 1167, 1474
GsaI CCCAGC 1 cut(s) 890
HaeII RGCGCY 1 cut(s) 633
HaeIII GGCC 4 cut(s) 96, 102, 748, 944
HapII CCGG 1 cut(s) 633
HhaI GCGC 1 cut(s) 632
Hin1II CATG 4 cut(s) 232, 827, 863, 1321
Hin6I GCGC 1 cut(s) 630
HinP1I GCGC 1 cut(s) 630
HindIII AAGCTT 3 cut(s) 179, 494, 1449
HinfI GANTC 8 cut(s) 220, 264, 284, 689, 696, 966, 1091, 1493
HpaII CCGG 1 cut(s) 633
HphI GGTGA 6 cut(s) 338, 830, 1030, 1166, 1246, 1488
Hpy166II GTNNAC 3 cut(s) 298, 368, 1371
Hpy188III TCNNGA 7 cut(s) 191, 693, 881, 900, 934, 1310, 1337
Hpy8I GTNNAC 3 cut(s) 298, 368, 1371
HpyAV CCTTC 3 cut(s) 314, 755, 988
HpyCH4III ACNGT 4 cut(s) 35, 1028, 1136, 1154
HpyCH4IV ACGT 4 cut(s) 175, 370, 621, 811
HpyCH4V TGCA 8 cut(s) 159, 232, 439, 581, 715, 821, 866, 1281
HpyF10VI GCNNNNNNNGC 5 cut(s) 152, 712, 827, 907, 916
HpyF3I CTNAG 8 cut(s) 243, 381, 456, 492, 585, 656, 757, 1363
HpySE526I ACGT 4 cut(s) 175, 370, 621, 811
Hsp92II CATG 4 cut(s) 232, 827, 863, 1321
HspAI GCGC 1 cut(s) 630
Ksp22I TGATCA 1 cut(s) 1320
Kzo9I GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
LguI GCTCTTC 1 cut(s) 1041
LmnI GCTCC 3 cut(s) 627, 798, 1407
Lsp1109I GCAGC 4 cut(s) 364, 850, 1178, 1485
LweI GCATC 4 cut(s) 241, 256, 478, 1105
MaeI CTAG 3 cut(s) 18, 92, 1163
MaeII ACGT 4 cut(s) 175, 370, 621, 811
MaeIII GTNAC 2 cut(s) 836, 1298
MalI GATC 8 cut(s) 69, 227, 339, 447, 741, 1078, 1322, 1335
MboI GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
MflI RGATCY 2 cut(s) 445, 1076
MhlI GDGCHC 1 cut(s) 803
MluCI AATT 6 cut(s) 104, 148, 460, 998, 1082, 1157
MlyI GAGTC 3 cut(s) 278, 698, 960
MmeI TCCRAC 2 cut(s) 541, 1054
Mph1103I ATGCAT 2 cut(s) 234, 441
MseI TTAA 7 cut(s) 62, 390, 450, 498, 732, 906, 1053
MslI CAYNNNNRTG 2 cut(s) 252, 305
MspCI CTTAAG 2 cut(s) 449, 905
MspI CCGG 1 cut(s) 633
MspR9I CCNGG 1 cut(s) 537
MvaI CCWGG 1 cut(s) 537
MvnI CGCG 2 cut(s) 901, 959
MwoI GCNNNNNNNGC 5 cut(s) 152, 712, 827, 907, 916
NdeII GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
NlaIII CATG 4 cut(s) 232, 827, 863, 1321
NlaIV GGNNCC 2 cut(s) 666, 800
NmeAIII GCCGAG 1 cut(s) 60
NmuCI GTSAC 2 cut(s) 836, 1298
NruI TCGCGA 1 cut(s) 901
NsiI ATGCAT 2 cut(s) 234, 441
NspI RCATGY 1 cut(s) 863
PciSI GCTCTTC 1 cut(s) 1041
PfeI GAWTC 5 cut(s) 220, 264, 696, 1091, 1493
PkrI GCNGC 5 cut(s) 379, 865, 1120, 1168, 1475
PleI GAGTC 3 cut(s) 278, 697, 960
PpsI GAGTC 3 cut(s) 278, 697, 960
Psp6I CCWGG 1 cut(s) 535
PspFI CCCAGC 1 cut(s) 886
PspGI CCWGG 1 cut(s) 535
PspN4I GGNNCC 2 cut(s) 666, 800
PspPI GGNCC 1 cut(s) 608
PstNI CAGNNNCTG 1 cut(s) 547
PsuI RGATCY 2 cut(s) 445, 1076
RruI TCGCGA 1 cut(s) 901
RsaI GTAC 3 cut(s) 127, 274, 647
RsaNI GTAC 3 cut(s) 126, 273, 646
RseI CAYNNNNRTG 2 cut(s) 252, 305
SapI GCTCTTC 1 cut(s) 1041
SaqAI TTAA 7 cut(s) 62, 390, 450, 498, 732, 906, 1053
SatI GCNGC 5 cut(s) 378, 864, 1119, 1167, 1474
Sau3AI GATC 8 cut(s) 67, 225, 337, 445, 739, 1076, 1320, 1333
Sau96I GGNCC 1 cut(s) 608
SchI GAGTC 3 cut(s) 278, 698, 960
ScrFI CCNGG 1 cut(s) 537
SduI GDGCHC 1 cut(s) 803
SfaNI GCATC 4 cut(s) 241, 256, 478, 1105
SfcI CTRYAG 1 cut(s) 504
SgrAI CRCCGGYG 1 cut(s) 632
SinI GGWCC 1 cut(s) 608
SmiMI CAYNNNNRTG 2 cut(s) 252, 305
SmlI CTYRAG 2 cut(s) 449, 905
SmoI CTYRAG 2 cut(s) 449, 905
Sse9I AATT 6 cut(s) 104, 148, 460, 998, 1082, 1157
SsiI CCGC 4 cut(s) 959, 1118, 1121, 1245
SspMI CTAG 3 cut(s) 18, 92, 1163
StyD4I CCNGG 1 cut(s) 535
StyI CCWWGG 2 cut(s) 97, 842
TaaI ACNGT 4 cut(s) 35, 1028, 1136, 1154
TaiI ACGT 4 cut(s) 178, 373, 624, 814
TaqI TCGA 2 cut(s) 792, 882
TasI AATT 6 cut(s) 104, 148, 460, 998, 1082, 1157
TatI WGTACW 2 cut(s) 125, 645
TauI GCSGC 1 cut(s) 1121
TfiI GAWTC 5 cut(s) 220, 264, 696, 1091, 1493
Tru1I TTAA 7 cut(s) 62, 390, 450, 498, 732, 906, 1053
Tru9I TTAA 7 cut(s) 62, 390, 450, 498, 732, 906, 1053
TscAI CASTG 5 cut(s) 40, 487, 1033, 1141, 1483
TseFI GTSAC 2 cut(s) 836, 1298
TseI GCWGC 4 cut(s) 377, 863, 1166, 1473
Tsp45I GTSAC 2 cut(s) 836, 1298
TspDTI ATGAA 6 cut(s) 294, 840, 870, 938, 1212, 1397
TspGWI ACGGA 2 cut(s) 558, 732
TspRI CASTG 5 cut(s) 40, 487, 1033, 1141, 1483
Vha464I CTTAAG 2 cut(s) 449, 905
VpaK11BI GGWCC 1 cut(s) 608
XapI RAATTY 2 cut(s) 460, 1157
XceI RCATGY 1 cut(s) 863
XcmI CCANNNNNNNNNTGG 1 cut(s) 104
XspI CTAG 3 cut(s) 18, 92, 1163
Zsp2I ATGCAT 2 cut(s) 234, 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.