AT1G43690

ubiquitin interaction motif-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012146
Physical Location & Seq
Forward (+)
16478159 .. 16482859
4701 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G43690.1

Sequence Viewer

Length: 1800 bp
ATGGCGGATCATCAAGAAGACGAAGATTTGAAATTGGCTCTTAAGATGAGTATGCAATACAATCCTCCTGAGCCAAAACGGAGCAAACCCATTGAAGAAGAAGAAACTGGATCCGGATCTCAATCTGGTGGTGAATCACCGGAGGCGAAATCTCGTCGGTTGCAGAGAGAGCTTATGGCTGCTGCTGCTGAGAAGCGTATGGTTTTGTTTCCTAAGAGTCCTTCTCCTGTTAACAAAGCTAGGGTTTTGCCAATTAGTGTTGTTGGTGGTGATAAGGATGAGGAAGTTGTGGGATCTTGTTTGGGGAAGGAGTTGTCTGTGGAAGAGTCTGATCAGTTGTTTTCGATTGTGTTTGGGAATGAGGTTTCGAAAAGTGTTCTTGCTCAATGGACTAATCAAGGCATAAGATTTAGCCCTGATCCTGAAACTACTATAGGATTAGTGCAGCATGAAGGTGGGCCCTGCGGTGTTTTAGCAGCACTACAAGCATTTGTTCTTAAATACCTTCTTTACTTTCCGGGTGACAGAGTAGCTTCCCCCTGTATGGGTGTCTGGACATTATCTAAAGATCGTCATGTTGTGTCTGACTCCTTCTCTTCTGTAACTGAAGAAGCAAAAACAAAGGCCCTTGTCAGAAGTATGTGTGAGATTCTATTTATGTGTGGAGACAACAACCGCGCTGTAATAGCAAGTTTCACTAATTTTGAGGATTCCAGTAGTAATCAAAAAGATGAGGCAATGGCTGGTGGGCTCCCCATTGAATCTGCTTCAGATTTGCAGAAGATCTTAAGGTTCGAGACATTCACAACTCAAGCCAGTGCCCAAAATAAGCTAGAAGGCACAATAACTGCTTTTCAAAGTCGCATGGGTGCTTTGCTGTTCCTAATTTCTGCTTTACTCTCCCGAGGACTGGATTCAGTTCAAGCCGACAGGGATGATCCAAACCTCCCCCTAGTAACTGCACCATTTGGACATGCCTCCCAGGAAATTGTAAACCTGCTGCTGTGTGGAGAAGCGGTTCCTAATGTATTTGATGGACGGATGGATCTTGGAGGCGGCATGTTTCTGAAAGGCATATCTAAGAATGTAGATGTGGGCTTCCTCACGTTGCTCGAGTCTCTCAACTTCTGCAAAGTCGGTCAGAATCTCAAATGTCCCAAATGGCCAATATGGGTTATTGGCAGTGAGTCTCATTACACCGTCTTGTTTGCACTTGACCCATCCGTCCAAGAAGAAAACGAACTTGAGCTGAGAGAGTCTCAGATAAGAAGAGCTTTCGATGCAAGAGACCAAAGCGGAGGAGGAGGTTTCATAACTGTGGAGGCCTTTCACCAAGTTGCTCAGGAAACAAACATCAGACTCCCAATCAAGAAGCTCGACGACATCTGCGCCACGGGTTTCATCGTGTGGAGCGAGTTATGGCAAGTTATCTTGGAACTAGACCAAAATTTGGGAGGGATAAAAGATGCAACAGGACTGATGGGAAAGAAAGTGTTTGATATCTATCACTTCAACGGAATTGCCAAGTCCGATATAAACGGTGGTGGTCAAGCAATGGCTGTGGAAGGTGGGATGGTTCCTATGCAAAGGCCAAGGCTGACAAAACTAAACGTATCGGTTCCTCCAAAATGGACACCAGAAGAGTACATGACATGTGCACTGCCGCCGAGCAGCTCTGAGAAAGACTCAGAAGTGAATCAGCCAAAACCGGTCCAACATGCACCACTGGTGGATTGTATCAGAACTCGGTGGTCGCGTGCCGCTTGTAGCTGGTCTGGAGATCCTCCAAGTATAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4205

Protein Analysis

599

Amino Acids

65.46

Weight (kDa)

5.06

Isoelectric Point (pI)

51.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MINDY-3_4_CD PF13898 116 - 415 1.2e-60 Deubiquitinating enzyme MINDY-3/4, conserved domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012146)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G43690
fragaria_vesca FvH4_2g13910 FvH4_2g13910
malus_domestica MD05G1023700.v1.1 MD10G1024300.v1.1
prunus_persica Prupe.8G028200_v2.0.a1 Prupe.8G028200_v2.0.a1
pyrus_communis pycom05g01520 pycom10g01610
rosa_chinensis RchiOBHm_Chr6g0275661
rosa_laevigata RLG00000013449
rosa_multiflora Rmu_sc0011044.1_g000001
rosa_roxburghii Rroxscaffold_7G00193050
rosa_rugosa Rorug06G0095400
rosa_samantha Rh6AG207300 Rh6BG209900 Rh6CG213300 Rh6DG203000
rosa_wichuraiana Rw6G018070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1223
Acc36I ACCTGC 1 cut(s) 1005
AccB7I CCANNNNNTGG 1 cut(s) 1450
AccII CGCG 2 cut(s) 678, 1756
AccIII TCCGGA 1 cut(s) 113
AciI CCGC 8 cut(s) 5, 465, 676, 1016, 1056, 1296, 1664, 1761
AclWI GGATC 9 cut(s) 15, 105, 118, 124, 301, 413, 932, 1053, 1775
AcoI YGGCCR 1 cut(s) 1163
AcsI RAATTY 1 cut(s) 1447
AcuI CTGAAG 2 cut(s) 627, 753
AfaI GTAC 1 cut(s) 1646
AfiI CCNNNNNNNGG 4 cut(s) 544, 545, 910, 1450
AflII CTTAAG 2 cut(s) 41, 787
AflIII ACRYGT 1 cut(s) 1652
AgeI ACCGGT 1 cut(s) 1708
AgsI TTSAA 6 cut(s) 31, 95, 761, 857, 923, 1513
AjnI CCWGG 1 cut(s) 981
AloI GAACNNNNNNTCC 2 cut(s) 1002, 1034
AluBI AGCT 9 cut(s) 172, 239, 533, 832, 1249, 1274, 1375, 1674, 1770
AluI AGCT 9 cut(s) 172, 239, 533, 832, 1249, 1274, 1375, 1674, 1770
Alw21I GWGCWC 1 cut(s) 1660
Alw26I GTCTC 6 cut(s) 660, 791, 1122, 1194, 1263, 1281
Alw44I GTGCAC 1 cut(s) 1656
AlwI GGATC 9 cut(s) 15, 105, 118, 124, 301, 413, 932, 1053, 1775
Ama87I CYCGRG 2 cut(s) 903, 1112
Aor13HI TCCGGA 1 cut(s) 113
AoxI GGCC 5 cut(s) 458, 624, 1163, 1323, 1589
ApaI GGGCCC 1 cut(s) 462
ApaLI GTGCAC 1 cut(s) 1656
ApeKI GCWGC 7 cut(s) 179, 182, 185, 445, 476, 1000, 1671
ApoI RAATTY 1 cut(s) 1447
AsiGI ACCGGT 1 cut(s) 1708
Asp700I GAANNNNTTC 1 cut(s) 1017
AspLEI GCGC 2 cut(s) 680, 1391
AspS9I GGNCC 4 cut(s) 458, 459, 625, 1711
AsuC2I CCSGG 1 cut(s) 519
AsuHPI GGTGA 5 cut(s) 129, 143, 281, 533, 1322
AsuII TTCGAA 1 cut(s) 368
AvaI CYCGRG 2 cut(s) 903, 1112
AvaII GGWCC 1 cut(s) 1711
BaeGI GKGCMC 3 cut(s) 462, 823, 1660
BalI TGGCCA 1 cut(s) 1165
BamHI GGATCC 1 cut(s) 110
BanII GRGCYC 2 cut(s) 462, 753
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 1660
BbvI GCAGC 7 cut(s) 166, 169, 172, 457, 488, 987, 1683
BccI CCATC 5 cut(s) 1028, 1036, 1228, 1474, 1567
BciT130I CCWGG 1 cut(s) 983
BclI TGATCA 1 cut(s) 331
BcnI CCSGG 1 cut(s) 519
BcoDI GTCTC 6 cut(s) 660, 791, 1122, 1194, 1263, 1281
BfaI CTAG 4 cut(s) 240, 833, 953, 1439
BfmI CTRYAG 1 cut(s) 432
BfrI CTTAAG 2 cut(s) 41, 787
BfuAI ACCTGC 1 cut(s) 1005
BglII AGATCT 1 cut(s) 783
Bme1390I CCNGG 2 cut(s) 519, 983
Bme18I GGWCC 1 cut(s) 1711
BmeT110I CYCGRG 2 cut(s) 903, 1112
BmgT120I GGNCC 4 cut(s) 458, 459, 625, 1711
BmiI GGNNCC 6 cut(s) 112, 460, 752, 1020, 1578, 1620
BmrFI CCNGG 2 cut(s) 519, 983
BmsI GCATC 2 cut(s) 1270, 1456
BpiI GAAGAC 1 cut(s) 24
BplI GAGNNNNNCTC 6 cut(s) 208, 240, 1243, 1275, 1670, 1702
BpmI CTGGAG 1 cut(s) 1797
Bpu10I CCTNAGC 2 cut(s) 69, 1341
Bpu14I TTCGAA 1 cut(s) 368
BpuEI CTTGAG 2 cut(s) 795, 1265
BpuMI CCSGG 1 cut(s) 519
BsaBI GATNNNNATC 3 cut(s) 115, 121, 1503
BsaI GGTCTC 1 cut(s) 1281
BsaJI CCNNGG 4 cut(s) 904, 981, 1392, 1592
BsaWI WCCGGW 3 cut(s) 113, 139, 1708
BsaXI ACNNNNNCTCC 2 cut(s) 1002, 1032
Bsc4I CCNNNNNNNGG 4 cut(s) 544, 545, 910, 1450
Bse118I RCCGGY 1 cut(s) 1708
Bse1I ACTGG 5 cut(s) 112, 714, 816, 915, 1731
Bse3DI GCAATG 2 cut(s) 744, 1560
Bse8I GATNNNNATC 3 cut(s) 115, 121, 1503
BseAI TCCGGA 1 cut(s) 113
BseBI CCWGG 1 cut(s) 983
BseDI CCNNGG 4 cut(s) 904, 981, 1392, 1592
BseGI GGATG 5 cut(s) 283, 940, 1047, 1220, 1578
BseJI GATNNNNATC 3 cut(s) 115, 121, 1503
BseLI CCNNNNNNNGG 4 cut(s) 544, 545, 910, 1450
BseMI GCAATG 2 cut(s) 744, 1560
BseMII CTCAG 7 cut(s) 60, 180, 1241, 1274, 1355, 1668, 1701
BseNI ACTGG 5 cut(s) 112, 714, 816, 915, 1731
BseRI GAGGAG 2 cut(s) 1314, 1317
BseSI GKGCMC 3 cut(s) 462, 823, 1660
BseXI GCAGC 7 cut(s) 166, 169, 172, 457, 488, 987, 1683
BsgI GTGCAG 2 cut(s) 464, 945
Bsh1236I CGCG 2 cut(s) 678, 1756
BshFI GGCC 5 cut(s) 460, 626, 1165, 1325, 1591
BshTI ACCGGT 1 cut(s) 1708
BsiHKAI GWGCWC 1 cut(s) 1660
BsiHKCI CYCGRG 2 cut(s) 903, 1112
BsiSI CCGG 4 cut(s) 114, 140, 518, 1709
BslFI GGGAC 1 cut(s) 1140
BslI CCNNNNNNNGG 4 cut(s) 544, 545, 910, 1450
BsmAI GTCTC 6 cut(s) 660, 791, 1122, 1194, 1263, 1281
BsmFI GGGAC 1 cut(s) 1140
BsnI GGCC 5 cut(s) 460, 626, 1165, 1325, 1591
Bso31I GGTCTC 1 cut(s) 1281
BsoBI CYCGRG 2 cut(s) 903, 1112
Bsp119I TTCGAA 1 cut(s) 368
Bsp120I GGGCCC 1 cut(s) 458
Bsp1286I GDGCHC 4 cut(s) 462, 753, 823, 1660
Bsp13I TCCGGA 1 cut(s) 113
BspACI CCGC 8 cut(s) 5, 465, 676, 1016, 1056, 1296, 1664, 1761
BspANI GGCC 5 cut(s) 460, 626, 1165, 1325, 1591
BspCNI CTCAG 7 cut(s) 61, 181, 1242, 1273, 1354, 1669, 1700
BspEI TCCGGA 1 cut(s) 113
BspFNI CGCG 2 cut(s) 678, 1756
BspLI GGNNCC 6 cut(s) 112, 460, 752, 1020, 1578, 1620
BspMI ACCTGC 1 cut(s) 1005
BspPI GGATC 9 cut(s) 15, 105, 118, 124, 301, 413, 932, 1053, 1775
BspQI GCTCTTC 1 cut(s) 1264
BspT104I TTCGAA 1 cut(s) 368
BspTI CTTAAG 2 cut(s) 41, 787
BspTNI GGTCTC 1 cut(s) 1281
BsrDI GCAATG 2 cut(s) 744, 1560
BsrFI RCCGGY 1 cut(s) 1708
BsrI ACTGG 5 cut(s) 112, 714, 816, 915, 1731
BssAI RCCGGY 1 cut(s) 1708
BssECI CCNNGG 4 cut(s) 904, 981, 1392, 1592
BssT1I CCWWGG 1 cut(s) 1592
Bst2UI CCWGG 1 cut(s) 983
Bst4CI ACNGT 3 cut(s) 1201, 1318, 1541
Bst6I CTCTTC 4 cut(s) 318, 601, 1264, 1635
BstAFI CTTAAG 2 cut(s) 41, 787
BstBI TTCGAA 1 cut(s) 368
BstC8I GCNNGC 1 cut(s) 1758
BstDEI CTNAG 9 cut(s) 69, 189, 213, 1080, 1250, 1260, 1341, 1677, 1687
BstDSI CCRYGG 1 cut(s) 1392
BstF5I GGATG 5 cut(s) 283, 940, 1047, 1220, 1578
BstFNI CGCG 2 cut(s) 678, 1756
BstHHI GCGC 2 cut(s) 680, 1391
BstMAI GTCTC 6 cut(s) 660, 791, 1122, 1194, 1263, 1281
BstMWI GCNNNNNNNGC 5 cut(s) 169, 185, 485, 686, 1280
BstNI CCWGG 1 cut(s) 983
BstNSI RCATGY 4 cut(s) 977, 1063, 1656, 1721
BstSCI CCNGG 2 cut(s) 517, 981
BstSFI CTRYAG 1 cut(s) 432
BstSLI GKGCMC 3 cut(s) 462, 823, 1660
BstUI CGCG 2 cut(s) 678, 1756
BstV1I GCAGC 7 cut(s) 166, 169, 172, 457, 488, 987, 1683
BstV2I GAAGAC 1 cut(s) 24
BstX2I RGATCY 6 cut(s) 110, 116, 293, 783, 1045, 1780
BstYI RGATCY 6 cut(s) 110, 116, 293, 783, 1045, 1780
BsuRI GGCC 5 cut(s) 460, 626, 1165, 1325, 1591
BtgI CCRYGG 1 cut(s) 1392
BtsCI GGATG 5 cut(s) 283, 940, 1047, 1220, 1578
BtsI GCAGTG 2 cut(s) 1189, 1658
BtsIMutI CAGTG 4 cut(s) 823, 1189, 1658, 1724
BveI ACCTGC 1 cut(s) 1005
Cac8I GCNNGC 1 cut(s) 1758
CfoI GCGC 2 cut(s) 680, 1391
Cfr10I RCCGGY 1 cut(s) 1708
Cfr13I GGNCC 4 cut(s) 458, 459, 625, 1711
Csp6I GTAC 1 cut(s) 1645
CspAI ACCGGT 1 cut(s) 1708
CspCI CAANNNNNGTGG 2 cut(s) 1542, 1577
CviAII CATG 8 cut(s) 449, 575, 865, 974, 1060, 1648, 1653, 1718
CviQI GTAC 1 cut(s) 1645
DdeI CTNAG 9 cut(s) 69, 189, 213, 1080, 1250, 1260, 1341, 1677, 1687
DrdI GACNNNNNNGTC 1 cut(s) 1223
DseDI GACNNNNNNGTC 1 cut(s) 1223
EaeI YGGCCR 1 cut(s) 1163
Eam1104I CTCTTC 4 cut(s) 318, 601, 1264, 1635
EarI CTCTTC 4 cut(s) 318, 601, 1264, 1635
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 1592
Eco147I AGGCCT 1 cut(s) 1325
Eco24I GRGCYC 2 cut(s) 462, 753
Eco31I GGTCTC 1 cut(s) 1281
Eco32I GATATC 1 cut(s) 1501
Eco47I GGWCC 1 cut(s) 1711
Eco57I CTGAAG 2 cut(s) 627, 753
Eco88I CYCGRG 2 cut(s) 903, 1112
EcoO109I RGGNCCY 2 cut(s) 459, 625
EcoRII CCWGG 1 cut(s) 981
EcoRV GATATC 1 cut(s) 1501
EcoT14I CCWWGG 1 cut(s) 1592
EcoT38I GRGCYC 2 cut(s) 462, 753
ErhI CCWWGG 1 cut(s) 1592
FaeI CATG 8 cut(s) 452, 578, 868, 977, 1063, 1651, 1656, 1721
FalI AAGNNNNNCTT 2 cut(s) 1258, 1290
FaqI GGGAC 1 cut(s) 1140
FatI CATG 8 cut(s) 448, 574, 864, 973, 1059, 1647, 1652, 1717
FbaI TGATCA 1 cut(s) 331
FokI GGATG 5 cut(s) 290, 947, 1054, 1207, 1585
FriOI GRGCYC 2 cut(s) 462, 753
FspBI CTAG 4 cut(s) 240, 833, 953, 1439
GlaI GCGC 2 cut(s) 679, 1390
GsuI CTGGAG 1 cut(s) 1797
HaeIII GGCC 5 cut(s) 460, 626, 1165, 1325, 1591
HapII CCGG 4 cut(s) 114, 140, 518, 1709
HhaI GCGC 2 cut(s) 680, 1391
Hin1II CATG 8 cut(s) 452, 578, 868, 977, 1063, 1651, 1656, 1721
Hin6I GCGC 2 cut(s) 678, 1389
HinP1I GCGC 2 cut(s) 678, 1389
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HpaI GTTAAC 1 cut(s) 232
HpaII CCGG 4 cut(s) 114, 140, 518, 1709
HphI GGTGA 5 cut(s) 129, 143, 281, 533, 1322
Hpy166II GTNNAC 3 cut(s) 232, 994, 1658
Hpy8I GTNNAC 3 cut(s) 232, 994, 1658
Hpy99I CGWCG 2 cut(s) 159, 1382
HpyAV CCTTC 7 cut(s) 231, 301, 446, 515, 601, 830, 1559
HpyCH4III ACNGT 3 cut(s) 1201, 1318, 1541
HpyCH4IV ACGT 2 cut(s) 1106, 1611
HpyF10VI GCNNNNNNNGC 5 cut(s) 169, 185, 485, 686, 1280
HpyF3I CTNAG 9 cut(s) 69, 189, 213, 1080, 1250, 1260, 1341, 1677, 1687
HpySE526I ACGT 2 cut(s) 1106, 1611
Hsp92II CATG 8 cut(s) 452, 578, 868, 977, 1063, 1651, 1656, 1721
HspAI GCGC 2 cut(s) 678, 1389
Kpn2I TCCGGA 1 cut(s) 113
Ksp22I TGATCA 1 cut(s) 331
KspAI GTTAAC 1 cut(s) 232
LguI GCTCTTC 1 cut(s) 1264
LmnI GCTCC 3 cut(s) 81, 756, 1410
Lsp1109I GCAGC 7 cut(s) 166, 169, 172, 457, 488, 987, 1683
LweI GCATC 2 cut(s) 1270, 1456
MaeI CTAG 4 cut(s) 240, 833, 953, 1439
MaeII ACGT 2 cut(s) 1106, 1611
MaeIII GTNAC 3 cut(s) 521, 601, 955
MflI RGATCY 6 cut(s) 110, 116, 293, 783, 1045, 1780
MhlI GDGCHC 4 cut(s) 462, 753, 823, 1660
MlsI TGGCCA 1 cut(s) 1165
MluCI AATT 7 cut(s) 32, 252, 700, 885, 987, 1447, 1518
MluNI TGGCCA 1 cut(s) 1165
MlyI GAGTC 8 cut(s) 226, 335, 581, 1124, 1196, 1265, 1353, 1679
MmeI TCCRAC 1 cut(s) 1738
Mox20I TGGCCA 1 cut(s) 1165
MroI TCCGGA 1 cut(s) 113
MroXI GAANNNNTTC 1 cut(s) 1017
MscI TGGCCA 1 cut(s) 1165
MseI TTAA 4 cut(s) 42, 231, 498, 788
MslI CAYNNNNRTG 2 cut(s) 453, 1316
Msp20I TGGCCA 1 cut(s) 1165
MspCI CTTAAG 2 cut(s) 41, 787
MspI CCGG 4 cut(s) 114, 140, 518, 1709
MspR9I CCNGG 2 cut(s) 519, 983
MvaI CCWGG 1 cut(s) 983
MvnI CGCG 2 cut(s) 678, 1756
MwoI GCNNNNNNNGC 5 cut(s) 169, 185, 485, 686, 1280
NciI CCSGG 1 cut(s) 519
NlaIII CATG 8 cut(s) 452, 578, 868, 977, 1063, 1651, 1656, 1721
NlaIV GGNNCC 6 cut(s) 112, 460, 752, 1020, 1578, 1620
NmeAIII GCCGAG 1 cut(s) 1692
NmuCI GTSAC 1 cut(s) 521
NspI RCATGY 4 cut(s) 977, 1063, 1656, 1721
NspV TTCGAA 1 cut(s) 368
PaeR7I CTCGAG 1 cut(s) 1112
PceI AGGCCT 1 cut(s) 1325
PciI ACATGT 1 cut(s) 1652
PciSI GCTCTTC 1 cut(s) 1264
PcsI WCGNNNNNNNCGW 2 cut(s) 1410, 1753
PdmI GAANNNNTTC 1 cut(s) 1017
PfeI GAWTC 7 cut(s) 134, 649, 710, 761, 914, 1144, 1696
PflMI CCANNNNNTGG 1 cut(s) 1450
PinAI ACCGGT 1 cut(s) 1708
PleI GAGTC 8 cut(s) 225, 334, 581, 1123, 1195, 1264, 1353, 1679
PpsI GAGTC 8 cut(s) 225, 334, 581, 1123, 1195, 1264, 1353, 1679
PscI ACATGT 1 cut(s) 1652
Psp6I CCWGG 1 cut(s) 981
PspGI CCWGG 1 cut(s) 981
PspN4I GGNNCC 6 cut(s) 112, 460, 752, 1020, 1578, 1620
PspOMI GGGCCC 1 cut(s) 458
PspPI GGNCC 4 cut(s) 458, 459, 625, 1711
PspXI VCTCGAGB 1 cut(s) 1112
PsuI RGATCY 6 cut(s) 110, 116, 293, 783, 1045, 1780
RsaI GTAC 1 cut(s) 1646
RsaNI GTAC 1 cut(s) 1645
RseI CAYNNNNRTG 2 cut(s) 453, 1316
SapI GCTCTTC 1 cut(s) 1264
SaqAI TTAA 4 cut(s) 42, 231, 498, 788
Sau96I GGNCC 4 cut(s) 458, 459, 625, 1711
SchI GAGTC 8 cut(s) 226, 335, 581, 1124, 1196, 1265, 1353, 1679
ScrFI CCNGG 2 cut(s) 519, 983
SduI GDGCHC 4 cut(s) 462, 753, 823, 1660
SfaNI GCATC 2 cut(s) 1270, 1456
SfcI CTRYAG 1 cut(s) 432
Sfr274I CTCGAG 1 cut(s) 1112
SfuI TTCGAA 1 cut(s) 368
SinI GGWCC 1 cut(s) 1711
SlaI CTCGAG 1 cut(s) 1112
SmiMI CAYNNNNRTG 2 cut(s) 453, 1316
SmlI CTYRAG 5 cut(s) 41, 787, 810, 1112, 1244
SmoI CTYRAG 5 cut(s) 41, 787, 810, 1112, 1244
Sse9I AATT 7 cut(s) 32, 252, 700, 885, 987, 1447, 1518
SseBI AGGCCT 1 cut(s) 1325
SsiI CCGC 8 cut(s) 5, 465, 676, 1016, 1056, 1296, 1664, 1761
SspMI CTAG 4 cut(s) 240, 833, 953, 1439
StuI AGGCCT 1 cut(s) 1325
StyD4I CCNGG 2 cut(s) 517, 981
StyI CCWWGG 1 cut(s) 1592
TaaI ACNGT 3 cut(s) 1201, 1318, 1541
TaiI ACGT 2 cut(s) 1109, 1614
TaqI TCGA 6 cut(s) 344, 368, 795, 1113, 1278, 1377
TaqII GACCGA 1 cut(s) 1127
TasI AATT 7 cut(s) 32, 252, 700, 885, 987, 1447, 1518
TatI WGTACW 1 cut(s) 1644
TauI GCSGC 3 cut(s) 1059, 1666, 1763
TfiI GAWTC 7 cut(s) 134, 649, 710, 761, 914, 1144, 1696
Tru1I TTAA 4 cut(s) 42, 231, 498, 788
Tru9I TTAA 4 cut(s) 42, 231, 498, 788
TscAI CASTG 4 cut(s) 823, 1189, 1665, 1731
TseFI GTSAC 1 cut(s) 521
TseI GCWGC 7 cut(s) 179, 182, 185, 445, 476, 1000, 1671
Tsp45I GTSAC 1 cut(s) 521
TspDTI ATGAA 3 cut(s) 465, 1300, 1390
TspGWI ACGGA 4 cut(s) 94, 1054, 1213, 1530
TspRI CASTG 4 cut(s) 823, 1189, 1665, 1731
Van91I CCANNNNNTGG 1 cut(s) 1450
Vha464I CTTAAG 2 cut(s) 41, 787
VneI GTGCAC 1 cut(s) 1656
VpaK11BI GGWCC 1 cut(s) 1711
XapI RAATTY 1 cut(s) 1447
XceI RCATGY 4 cut(s) 977, 1063, 1656, 1721
XhoI CTCGAG 1 cut(s) 1112
XmnI GAANNNNTTC 1 cut(s) 1017
XspI CTAG 4 cut(s) 240, 833, 953, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.