FvH4_2g13910

DUF4205

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0012146
Physical Location & Seq
Forward (+)
12198881 .. 12208175
9295 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g13910.t1

Sequence Viewer

Length: 1812 bp
ATGGCGGATCAGGAGGATGACTTCCAAATGGCGCTGCGGATGAGTATGCAGAACTCGCCGCCGGAGCCCAAGCGCAGCAAGCCCAGGGACGCCGATTCTCCGGCCGAGGAGTCGTCGGAGGTCAAGACTCGCCGGCTTCAGCGAGAGCTCATGGCCAGTGCTGCCGAGAAGAGAATGCTCTACGCCAGGGCCAGCTCTCCCTCTCCACCGTCTCCGGCTCCGGCTGCTTCGCCTGTTTCTGTTTCGAGGTTGGATTTGGAGGCCAATGTGGTGATGAAAGATAGGGAATTGGGCGCGGAGTTGAGCGTGGAGGAGGCCAAGCAGTTGTTTTCGATGGTGTATGGGGCTGAGGTGACTAAAGGCATTCTTGCGCAGTGGAGTAATCAGGGTATAAGGTTTAGTCCTGATCCAGAAACTTCGATGGGTCTAGTGCAGCATGAAGGGGGGCCCTGTGGCGTTTTAGCAGCCATTCAAGCACTTGTCCTCAAATACCTCCTTTTCTACCCAGACGGACTAGGTAAAGGTGCACCAAACATGCATCACAATTTGGGTTCAAGGACACTTTCTAGTAGTCATTGTGTTGCATCGACTAACTTTTCCTCACTTTCTGAAGATGCTAAAGCAAGAGCTTTGCTTAGAAGTATGGGTGAGATATTGTTCTCATGTGGAAGTAATAAAAGGGCTGTGGTTGCAACTTTGAGTGTTATTGGAGATGACGTTACGAGGTTTGGAGGCAGCAAGGATGAAGTGATAGCAAAATCACTTGAGGGCCTTTCTATTGAATCAGCTGCTGACTTGCATAAAGTGCTAAGAGTTAAGACATACACGACTGAAGAAAGTGTACTTCAGGGGCTAGAATCAGTGATTCCTGTTTTCCGAAGTCGTATGGGGGCATTGCTGTTCCTTATTTCTGCTTTGCTTTCGCGTGGCCTGGACTTAATCCAGGCTGACAGGGATGATCCTAGCCTACCTCTTGTCACTGCTCCATTTGGGCATGCGTCACAGGAAATTGTCAATTTACTGCTCTCCGGGCAGGCTGTTCCAAACGTCTTTGATGGAAATATGGATCTGGGGGGTGGTATGTCCTTAAAGGGCATATCAAGAACTGTAGAAGTTGGATTCTTAACACTGTTGGAGTCCTTAAATTTCTGCAAGGTTGGCCATCATTTGAAATGCCCTAGATGGCCAATCTGGGTAGTGGGAAGTGAGTCTCATTATACAGTTCTCTTTGCTCCTGATACCAATGTCCAGGATGAGAATGAACTGGAAGGAAGGGAATCACAGATTCGGAAAGCTTTTGATGCCCAAGATCAGAGTGGGGGTGGTGGTTTCATTAGTGTTGAAGGTTTTCACCAAGTCCTGAGGGAAACTGATGTAAAAGTTCCAAGTGAGAAGGTTGATCTTCTTTGCAGCACAGGATTCATTGTATGGAGCGAGTTCTGGCAGGTTATTTTGGATCTGGACAAGACCATGGGAGGCCTCAAGGATTCAACTGGATTGATGGGTAAGAAGGTCTTTGATCTTTACCATTTTAATGGAATTGCAAAATCAGATCTGAATGGAAGCCAAGTAAACTCTGGAGGTGAGACTCCAGTGCAAAGACCTAGGCTCACAAAATTGAGAGTTTCGGTTCCTCCAAGATGGACTCCTGAAGAATATATGACAGATGTATCAGTGTCCTCTAGTGCTAATGAATCCAAAGAAATATCAAAGCCAGAGCCTCCTCAGCATGCACCTTTGGTGGACTGCATACGGACACGCTGGCCCCGTGCTGTTTGCAACTGGGTAGGGGATGCGCCTAGTATTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4205

Protein Analysis

604

Amino Acids

65.59

Weight (kDa)

5.53

Isoelectric Point (pI)

51.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MINDY-3_4_CD PF13898 113 - 419 4.4e-56 Deubiquitinating enzyme MINDY-3/4, conserved domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012146)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G43690
fragaria_vesca FvH4_2g13910 FvH4_2g13910
malus_domestica MD05G1023700.v1.1 MD10G1024300.v1.1
prunus_persica Prupe.8G028200_v2.0.a1 Prupe.8G028200_v2.0.a1
pyrus_communis pycom05g01520 pycom10g01610
rosa_chinensis RchiOBHm_Chr6g0275661
rosa_laevigata RLG00000013449
rosa_multiflora Rmu_sc0011044.1_g000001
rosa_roxburghii Rroxscaffold_7G00193050
rosa_rugosa Rorug06G0095400
rosa_samantha Rh6AG207300 Rh6BG209900 Rh6CG213300 Rh6DG203000
rosa_wichuraiana Rw6G018070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 372
Acc36I ACCTGC 1 cut(s) 1435
AccII CGCG 2 cut(s) 296, 925
AciI CCGC 4 cut(s) 5, 37, 59, 296
AclWI GGATC 5 cut(s) 15, 401, 953, 1074, 1464
AcoI YGGCCR 4 cut(s) 102, 153, 1159, 1184
AcsI RAATTY 1 cut(s) 1144
AcuI CTGAAG 5 cut(s) 122, 630, 830, 852, 1671
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 1 cut(s) 843
AgsI TTSAA 6 cut(s) 473, 555, 782, 1171, 1343, 1491
AjnI CCWGG 5 cut(s) 83, 185, 930, 942, 1248
AluBI AGCT 5 cut(s) 148, 195, 629, 788, 1295
AluI AGCT 5 cut(s) 148, 195, 629, 788, 1295
Alw21I GWGCWC 2 cut(s) 150, 529
Alw26I GTCTC 3 cut(s) 216, 1215, 1580
Alw44I GTGCAC 1 cut(s) 525
AlwI GGATC 5 cut(s) 15, 401, 953, 1074, 1464
AlwNI CAGNNNCTG 1 cut(s) 791
ApaI GGGCCC 1 cut(s) 450
ApaLI GTGCAC 1 cut(s) 525
ApeKI GCWGC 9 cut(s) 34, 75, 161, 224, 433, 464, 735, 788, 1410
ApoI RAATTY 1 cut(s) 1144
Asp700I GAANNNNTTC 1 cut(s) 1347
AspA2I CCTAGG 1 cut(s) 1604
AspLEI GCGC 5 cut(s) 34, 75, 296, 373, 1798
AspS9I GGNCC 5 cut(s) 189, 446, 447, 769, 1764
AsuC2I CCSGG 1 cut(s) 1030
AsuHPI GGTGA 5 cut(s) 283, 364, 659, 1343, 1595
AvrII CCTAGG 1 cut(s) 1604
AxyI CCTNAGG 1 cut(s) 1361
BaeGI GKGCMC 2 cut(s) 450, 529
BaeI ACNNNNGTAYC 4 cut(s) 1230, 1263, 1653, 1686
BalI TGGCCA 3 cut(s) 155, 1161, 1186
BanII GRGCYC 3 cut(s) 69, 150, 450
BarI GAAGNNNNNNTAC 2 cut(s) 825, 857
Bbv12I GWGCWC 2 cut(s) 150, 529
BbvCI CCTCAGC 2 cut(s) 348, 1725
BbvI GCAGC 9 cut(s) 21, 87, 148, 211, 445, 476, 747, 775, 1422
BccI CCATC 7 cut(s) 328, 415, 1049, 1170, 1176, 1495, 1635
BciT130I CCWGG 5 cut(s) 85, 187, 932, 944, 1250
BcnI CCSGG 1 cut(s) 1030
BcoDI GTCTC 3 cut(s) 216, 1215, 1580
BfaI CTAG 9 cut(s) 428, 515, 567, 854, 963, 1179, 1605, 1683, 1800
BfmI CTRYAG 1 cut(s) 1107
BfoI RGCGCY 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 1435
BglII AGATCT 1 cut(s) 1552
BlnI CCTAGG 1 cut(s) 1604
Bme1390I CCNGG 6 cut(s) 85, 187, 932, 944, 1030, 1250
BmgT120I GGNCC 5 cut(s) 189, 446, 447, 769, 1764
BmiI GGNNCC 6 cut(s) 66, 219, 447, 448, 1632, 1766
BmrFI CCNGG 6 cut(s) 85, 187, 932, 944, 1030, 1250
BmrI ACTGGG 1 cut(s) 1792
BmsI GCATC 5 cut(s) 547, 593, 604, 1291, 1783
BmuI ACTGGG 1 cut(s) 1792
BpmI CTGGAG 2 cut(s) 1575, 1599
Bpu10I CCTNAGC 2 cut(s) 348, 1725
BpuEI CTTGAG 2 cut(s) 785, 1466
BpuMI CCSGG 1 cut(s) 1030
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 6 cut(s) 83, 84, 105, 186, 1470, 1604
BsaXI ACNNNNNCTCC 2 cut(s) 702, 732
Bse118I RCCGGY 1 cut(s) 132
Bse1I ACTGG 5 cut(s) 156, 1269, 1498, 1592, 1787
Bse21I CCTNAGG 1 cut(s) 1361
Bse3DI GCAATG 1 cut(s) 893
BseBI CCWGG 5 cut(s) 85, 187, 932, 944, 1250
BseDI CCNNGG 6 cut(s) 83, 84, 105, 186, 1470, 1604
BseGI GGATG 6 cut(s) 22, 45, 748, 961, 1258, 1798
BseMI GCAATG 1 cut(s) 893
BseMII CTCAG 3 cut(s) 339, 1352, 1739
BseNI ACTGG 5 cut(s) 156, 1269, 1498, 1592, 1787
BseRI GAGGAG 3 cut(s) 122, 326, 1713
BseSI GKGCMC 2 cut(s) 450, 529
BseX3I CGGCCG 1 cut(s) 102
BseXI GCAGC 9 cut(s) 21, 87, 148, 211, 445, 476, 747, 775, 1422
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 2 cut(s) 296, 925
Bsh1285I CGRYCG 1 cut(s) 105
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 2 cut(s) 150, 529
BsiSI CCGG 6 cut(s) 62, 101, 133, 215, 221, 1029
BslFI GGGAC 1 cut(s) 101
BsmAI GTCTC 3 cut(s) 216, 1215, 1580
BsmBI CGTCTC 1 cut(s) 216
BsmFI GGGAC 1 cut(s) 101
BsmI GAATGC 2 cut(s) 180, 363
Bsp120I GGGCCC 1 cut(s) 446
Bsp1286I GDGCHC 4 cut(s) 69, 150, 450, 529
Bsp143I GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
Bsp19I CCATGG 1 cut(s) 1470
BspACI CCGC 4 cut(s) 5, 37, 59, 296
BspCNI CTCAG 3 cut(s) 340, 1353, 1738
BspFNI CGCG 2 cut(s) 296, 925
BspLI GGNNCC 6 cut(s) 66, 219, 447, 448, 1632, 1766
BspMI ACCTGC 1 cut(s) 1435
BspPI GGATC 5 cut(s) 15, 401, 953, 1074, 1464
BsrDI GCAATG 1 cut(s) 893
BsrFI RCCGGY 1 cut(s) 132
BsrI ACTGG 5 cut(s) 156, 1269, 1498, 1592, 1787
BssAI RCCGGY 1 cut(s) 132
BssECI CCNNGG 6 cut(s) 83, 84, 105, 186, 1470, 1604
BssMI GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
BssNI GRCGYC 1 cut(s) 90
BssT1I CCWWGG 2 cut(s) 1470, 1604
Bst2UI CCWGG 5 cut(s) 85, 187, 932, 944, 1250
Bst4CI ACNGT 4 cut(s) 210, 1108, 1131, 1222
Bst6I CTCTTC 1 cut(s) 164
BstACI GRCGYC 1 cut(s) 90
BstAPI GCANNNNNTGC 1 cut(s) 805
BstC8I GCNNGC 7 cut(s) 80, 134, 193, 996, 1035, 1731, 1763
BstDEI CTNAG 5 cut(s) 348, 635, 809, 1361, 1725
BstDSI CCRYGG 1 cut(s) 1470
BstF5I GGATG 6 cut(s) 22, 45, 748, 961, 1258, 1798
BstFNI CGCG 2 cut(s) 296, 925
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 5 cut(s) 34, 75, 296, 373, 1798
BstKTI GATC 9 cut(s) 10, 409, 961, 1069, 1312, 1402, 1459, 1522, 1555
BstMAI GTCTC 3 cut(s) 216, 1215, 1580
BstMBI GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
BstMCI CGRYCG 1 cut(s) 105
BstNI CCWGG 5 cut(s) 85, 187, 932, 944, 1250
BstNSI RCATGY 3 cut(s) 538, 998, 1733
BstSCI CCNGG 6 cut(s) 83, 185, 930, 942, 1028, 1248
BstSFI CTRYAG 1 cut(s) 1107
BstSLI GKGCMC 2 cut(s) 450, 529
BstUI CGCG 2 cut(s) 296, 925
BstV1I GCAGC 9 cut(s) 21, 87, 148, 211, 445, 476, 747, 775, 1422
BstX2I RGATCY 3 cut(s) 1066, 1456, 1552
BstXI CCANNNNNNTGG 1 cut(s) 1535
BstYI RGATCY 3 cut(s) 1066, 1456, 1552
BstZI CGGCCG 1 cut(s) 102
Bsu36I CCTNAGG 1 cut(s) 1361
BtgI CCRYGG 1 cut(s) 1470
BtsCI GGATG 6 cut(s) 22, 45, 748, 961, 1258, 1798
BtsI GCAGTG 2 cut(s) 380, 978
BtsIMutI CAGTG 7 cut(s) 163, 380, 867, 978, 1127, 1599, 1680
BveI ACCTGC 1 cut(s) 1435
Cac8I GCNNGC 7 cut(s) 80, 134, 193, 996, 1035, 1731, 1763
CaiI CAGNNNCTG 1 cut(s) 791
CfoI GCGC 5 cut(s) 34, 75, 296, 373, 1798
Cfr10I RCCGGY 1 cut(s) 132
Cfr13I GGNCC 5 cut(s) 189, 446, 447, 769, 1764
CseI GACGC 2 cut(s) 98, 987
Csp6I GTAC 1 cut(s) 842
CviAII CATG 7 cut(s) 151, 437, 535, 663, 995, 1471, 1730
CviQI GTAC 1 cut(s) 842
DdeI CTNAG 5 cut(s) 348, 635, 809, 1361, 1725
DpnI GATC 9 cut(s) 9, 408, 960, 1068, 1311, 1401, 1458, 1521, 1554
DpnII GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
EaeI YGGCCR 4 cut(s) 102, 153, 1159, 1184
EagI CGGCCG 1 cut(s) 102
Eam1104I CTCTTC 1 cut(s) 164
EarI CTCTTC 1 cut(s) 164
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 148
EclXI CGGCCG 1 cut(s) 102
Eco130I CCWWGG 2 cut(s) 1470, 1604
Eco147I AGGCCT 1 cut(s) 1479
Eco24I GRGCYC 3 cut(s) 69, 150, 450
Eco52I CGGCCG 1 cut(s) 102
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 5 cut(s) 122, 630, 830, 852, 1671
Eco81I CCTNAGG 1 cut(s) 1361
EcoICRI GAGCTC 1 cut(s) 148
EcoO109I RGGNCCY 3 cut(s) 446, 447, 769
EcoRII CCWGG 5 cut(s) 83, 185, 930, 942, 1248
EcoT14I CCWWGG 2 cut(s) 1470, 1604
EcoT22I ATGCAT 1 cut(s) 540
EcoT38I GRGCYC 3 cut(s) 69, 150, 450
ErhI CCWWGG 2 cut(s) 1470, 1604
Esp3I CGTCTC 1 cut(s) 216
FaeI CATG 7 cut(s) 154, 440, 538, 666, 998, 1474, 1733
FalI AAGNNNNNCTT 4 cut(s) 351, 383, 1499, 1531
FaqI GGGAC 1 cut(s) 101
FatI CATG 7 cut(s) 150, 436, 534, 662, 994, 1470, 1729
FokI GGATG 6 cut(s) 29, 52, 755, 968, 1265, 1805
FriOI GRGCYC 3 cut(s) 69, 150, 450
FspBI CTAG 9 cut(s) 428, 515, 567, 854, 963, 1179, 1605, 1683, 1800
FspI TGCGCA 1 cut(s) 372
GlaI GCGC 5 cut(s) 33, 74, 295, 372, 1797
GsuI CTGGAG 2 cut(s) 1575, 1599
HaeII RGCGCY 1 cut(s) 35
HapII CCGG 6 cut(s) 62, 101, 133, 215, 221, 1029
HgaI GACGC 2 cut(s) 98, 987
HhaI GCGC 5 cut(s) 34, 75, 296, 373, 1798
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 7 cut(s) 154, 440, 538, 666, 998, 1474, 1733
Hin6I GCGC 5 cut(s) 32, 73, 294, 371, 1796
HinP1I GCGC 5 cut(s) 32, 73, 294, 371, 1796
HindIII AAGCTT 1 cut(s) 1293
HpaII CCGG 6 cut(s) 62, 101, 133, 215, 221, 1029
HphI GGTGA 5 cut(s) 283, 364, 659, 1343, 1595
Hpy166II GTNNAC 4 cut(s) 527, 842, 1573, 1744
Hpy188I TCNGA 8 cut(s) 118, 610, 878, 1290, 1314, 1552, 1557, 1811
Hpy8I GTNNAC 4 cut(s) 527, 842, 1573, 1744
Hpy99I CGWCG 1 cut(s) 118
HpyAV CCTTC 6 cut(s) 434, 1262, 1266, 1337, 1387, 1504
HpyCH4III ACNGT 4 cut(s) 210, 1108, 1131, 1222
HpyCH4IV ACGT 2 cut(s) 717, 1047
HpyF3I CTNAG 5 cut(s) 348, 635, 809, 1361, 1725
HpySE526I ACGT 2 cut(s) 717, 1047
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 7 cut(s) 154, 440, 538, 666, 998, 1474, 1733
HspAI GCGC 5 cut(s) 32, 73, 294, 371, 1796
KroI GCCGGC 1 cut(s) 132
KroNI GCCGGC 1 cut(s) 134
Kzo9I GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
LmnI GCTCC 5 cut(s) 64, 223, 988, 1237, 1431
Lsp1109I GCAGC 9 cut(s) 21, 87, 148, 211, 445, 476, 747, 775, 1422
LweI GCATC 5 cut(s) 547, 593, 604, 1291, 1783
MaeI CTAG 9 cut(s) 428, 515, 567, 854, 963, 1179, 1605, 1683, 1800
MaeII ACGT 2 cut(s) 717, 1047
MaeIII GTNAC 4 cut(s) 352, 718, 976, 999
MalI GATC 9 cut(s) 9, 408, 960, 1068, 1311, 1401, 1458, 1521, 1554
MboI GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
MboII GAAGA 5 cut(s) 181, 623, 845, 1394, 1664
MflI RGATCY 3 cut(s) 1066, 1456, 1552
MhlI GDGCHC 4 cut(s) 69, 150, 450, 529
MlsI TGGCCA 3 cut(s) 155, 1161, 1186
MluCI AATT 7 cut(s) 287, 544, 1008, 1015, 1144, 1539, 1616
MluNI TGGCCA 3 cut(s) 155, 1161, 1186
MlyI GAGTC 6 cut(s) 119, 121, 1145, 1217, 1582, 1639
MmeI TCCRAC 4 cut(s) 96, 231, 1096, 1113
Mox20I TGGCCA 3 cut(s) 155, 1161, 1186
Mph1103I ATGCAT 1 cut(s) 540
MroNI GCCGGC 1 cut(s) 132
MroXI GAANNNNTTC 1 cut(s) 1347
MscI TGGCCA 3 cut(s) 155, 1161, 1186
MseI TTAA 6 cut(s) 816, 938, 1088, 1124, 1142, 1533
MslI CAYNNNNRTG 1 cut(s) 1533
Msp20I TGGCCA 3 cut(s) 155, 1161, 1186
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 6 cut(s) 62, 101, 133, 215, 221, 1029
MspR9I CCNGG 6 cut(s) 85, 187, 932, 944, 1030, 1250
Mva1269I GAATGC 2 cut(s) 180, 363
MvaI CCWGG 5 cut(s) 85, 187, 932, 944, 1250
MvnI CGCG 2 cut(s) 296, 925
NaeI GCCGGC 1 cut(s) 134
NciI CCSGG 1 cut(s) 1030
NcoI CCATGG 1 cut(s) 1470
NdeII GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
NgoMIV GCCGGC 1 cut(s) 132
NlaIII CATG 7 cut(s) 154, 440, 538, 666, 998, 1474, 1733
NlaIV GGNNCC 6 cut(s) 66, 219, 447, 448, 1632, 1766
NmeAIII GCCGAG 2 cut(s) 130, 190
NmuCI GTSAC 3 cut(s) 352, 976, 999
NsbI TGCGCA 1 cut(s) 372
NsiI ATGCAT 1 cut(s) 540
NspI RCATGY 3 cut(s) 538, 998, 1733
PaeI GCATGC 2 cut(s) 998, 1733
PasI CCCWGGG 1 cut(s) 84
PceI AGGCCT 1 cut(s) 1479
PcsI WCGNNNNNNNCGW 1 cut(s) 1765
PctI GAATGC 2 cut(s) 180, 363
PdiI GCCGGC 1 cut(s) 134
PdmI GAANNNNTTC 1 cut(s) 1347
PfoI TCCNGGA 1 cut(s) 1248
PleI GAGTC 6 cut(s) 118, 121, 1144, 1216, 1582, 1639
PpsI GAGTC 6 cut(s) 118, 121, 1144, 1216, 1582, 1639
Psp124BI GAGCTC 1 cut(s) 150
Psp6I CCWGG 5 cut(s) 83, 185, 930, 942, 1248
PspGI CCWGG 5 cut(s) 83, 185, 930, 942, 1248
PspN4I GGNNCC 6 cut(s) 66, 219, 447, 448, 1632, 1766
PspOMI GGGCCC 1 cut(s) 446
PspPI GGNCC 5 cut(s) 189, 446, 447, 769, 1764
PstNI CAGNNNCTG 1 cut(s) 791
PsuI RGATCY 3 cut(s) 1066, 1456, 1552
PvuII CAGCTG 1 cut(s) 788
RsaI GTAC 1 cut(s) 843
RsaNI GTAC 1 cut(s) 842
RseI CAYNNNNRTG 1 cut(s) 1533
SacI GAGCTC 1 cut(s) 150
SaqAI TTAA 6 cut(s) 816, 938, 1088, 1124, 1142, 1533
Sau3AI GATC 9 cut(s) 7, 406, 958, 1066, 1309, 1399, 1456, 1519, 1552
Sau96I GGNCC 5 cut(s) 189, 446, 447, 769, 1764
SchI GAGTC 6 cut(s) 119, 121, 1145, 1217, 1582, 1639
ScrFI CCNGG 6 cut(s) 85, 187, 932, 944, 1030, 1250
SduI GDGCHC 4 cut(s) 69, 150, 450, 529
SfaNI GCATC 5 cut(s) 547, 593, 604, 1291, 1783
SfcI CTRYAG 1 cut(s) 1107
SmiMI CAYNNNNRTG 1 cut(s) 1533
SmlI CTYRAG 2 cut(s) 764, 1481
SmoI CTYRAG 2 cut(s) 764, 1481
SphI GCATGC 2 cut(s) 998, 1733
Sse9I AATT 7 cut(s) 287, 544, 1008, 1015, 1144, 1539, 1616
SseBI AGGCCT 1 cut(s) 1479
SsiI CCGC 4 cut(s) 5, 37, 59, 296
SspMI CTAG 9 cut(s) 428, 515, 567, 854, 963, 1179, 1605, 1683, 1800
SstI GAGCTC 1 cut(s) 150
StuI AGGCCT 1 cut(s) 1479
StyD4I CCNGG 6 cut(s) 83, 185, 930, 942, 1028, 1248
StyI CCWWGG 2 cut(s) 1470, 1604
TaaI ACNGT 4 cut(s) 210, 1108, 1131, 1222
TaiI ACGT 2 cut(s) 720, 1050
TaqI TCGA 4 cut(s) 245, 332, 419, 587
TasI AATT 7 cut(s) 287, 544, 1008, 1015, 1144, 1539, 1616
TatI WGTACW 1 cut(s) 841
TauI GCSGC 1 cut(s) 61
Tru1I TTAA 6 cut(s) 816, 938, 1088, 1124, 1142, 1533
Tru9I TTAA 6 cut(s) 816, 938, 1088, 1124, 1142, 1533
TscAI CASTG 7 cut(s) 163, 380, 867, 985, 1134, 1599, 1680
TseFI GTSAC 3 cut(s) 352, 976, 999
TseI GCWGC 9 cut(s) 34, 75, 161, 224, 433, 464, 735, 788, 1410
Tsp45I GTSAC 3 cut(s) 352, 976, 999
TspDTI ATGAA 7 cut(s) 290, 453, 759, 1275, 1321, 1411, 1707
TspGWI ACGGA 2 cut(s) 525, 1768
TspRI CASTG 7 cut(s) 163, 380, 867, 985, 1134, 1599, 1680
VneI GTGCAC 1 cut(s) 525
XapI RAATTY 1 cut(s) 1144
XceI RCATGY 3 cut(s) 538, 998, 1733
XcmI CCANNNNNNNNNTGG 2 cut(s) 1313, 1574
XmaJI CCTAGG 1 cut(s) 1604
XmnI GAANNNNTTC 1 cut(s) 1347
XspI CTAG 9 cut(s) 428, 515, 567, 854, 963, 1179, 1605, 1683, 1800
Zsp2I ATGCAT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.