AT1G51760

IAA-amino acid hydrolase ILR1-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
19199351 .. 19201707
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G51760.1

Sequence Viewer

Length: 1323 bp
ATGAGTTTCTTCAAATGGGTTTCTTTTGTTTTGATCCTTCACTTGCTTAATCCGACTCTGATTTCATGTTCCTCTAATGGGTTATCTCAAATACCTTCAAAGTTTCTTACTTTGGCTAAAAGGAATGATTTTTTCGATTGGATGGTTGGAATCAGAAGGAGAATCCATGAGAATCCAGAGTTAGGTTATGAGGAAGTAGAGACATCTAAGCTTGTTAGAGCAGAGTTGGAGAAGATGGGTGTTTCTTATAAGTACCCAGTTGCTGTTACTGGTGTTGTTGGGTATGTTGGAACTGGTCATGCTCCTTTTGTTGCTTTAAGGGCTGATATGGATGCACTTGCTATGCAGGAAATGGTGGAATGGGAACACAAGAGTAAGGTTCCAGGGAAGATGCACGCTTGTGGACATGACGCTCACACTACGATGCTTCTCGGTGCTGCAAAATTGCTCAAAGAACATGAAGAAGAGCTACAGGGCACAGTGGTTCTAGTTTTCCAACCAGCTGAGGAAGGAGGAGGAGGTGCAAAGAAGATTGTGGAGGCTGGAGTGTTGGAGAATGTGAGTGCAATCTTTGGATTACATGTCACAAATCAATTGGCATTAGGTCAAGTGAGCTCGAGAGAGGGTCCTATGTTGGCTGGTAGTGGCTTTTTCAAAGCTAAGATAAGCGGGAAAGGAGGCCACGCAGCTCTTCCGCAGCATACCATAGATCCGATACTGGCAGCTTCAAATGTTATTGTTAGCTTACAACACCTCGTTTCACGAGAGGCAGATCCTTTAGACTCTCAGGTGGTTACAGTTGCTAAATTTGAAGGCGGTGGTGCTTTCAATGTGATTCCTGACTCTGTTACTATCGGTGGTACATTCCGAGCTTTTTCAACTAAAAGCTTTATGCAACTCAAGAAAAGAATTGAGCAGGTTATCACAAGGCAAGCGAGCGTGAATATGTGTAATGCAACAGTGGATTTCATTGAAGAGGAGAAACCTTTTTTCCCACCAACTGTAAATGACAAAGCCTTACACCAGTTTTTCAAGAACGTTTCAGGCGATATGTTAGGGATTGAGAATTACGTCGAGATGCAACCATTAATGGGATCAGAAGATTTCTCTTTCTACCAACAAGCAATCCCGGGACATTTTAGCTTCGTTGGAATGCAAAACAAAGCTCGTTCACCAATGGCGAGCCCTCACTCGCCGTACTTTGAAGTTAACGAAGAATTACTACCTTATGGTGCTTCCCTTCATGCTTCCATGGCCACAAGATATCTTCTTGAACTAAAAGCTTCAACTCTAAATAAGAGTAACAAAAAAGATGAACTTTGA

Protein Analysis

440

Amino Acids

48.26

Weight (kDa)

6.25

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M20 PF01546 105 - 420 1.5e-44 Peptidase family M20/M25/M40
M20_dimer PF07687 214 - 311 1.3e-11 Peptidase dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 249
Acc36I ACCTGC 1 cut(s) 907
AciI CCGC 3 cut(s) 669, 695, 816
AclI AACGTT 1 cut(s) 1038
AclWI GGATC 4 cut(s) 28, 704, 767, 1102
AcoI YGGCCR 1 cut(s) 1254
AcsI RAATTY 1 cut(s) 806
AfaI GTAC 3 cut(s) 254, 862, 1199
AfiI CCNNNNNNNGG 3 cut(s) 78, 182, 1091
AflIII ACRYGT 1 cut(s) 580
AjnI CCWGG 1 cut(s) 382
AleI CACNNNNGTG 1 cut(s) 399
Alw21I GWGCWC 1 cut(s) 617
Alw26I GTCTC 1 cut(s) 194
AlwI GGATC 4 cut(s) 28, 704, 767, 1102
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 2 cut(s) 616, 1129
AoxI GGCC 2 cut(s) 679, 1254
ApeKI GCWGC 4 cut(s) 437, 686, 697, 722
ApoI RAATTY 1 cut(s) 806
AseI ATTAAT 1 cut(s) 1088
AspS9I GGNCC 1 cut(s) 626
AsuC2I CCSGG 2 cut(s) 1130, 1131
AsuHPI GGTGA 1 cut(s) 1164
AvaI CYCGRG 2 cut(s) 616, 1129
AvaII GGWCC 1 cut(s) 626
BaeGI GKGCMC 1 cut(s) 479
BalI TGGCCA 1 cut(s) 1256
BanII GRGCYC 2 cut(s) 617, 1187
BarI GAAGNNNNNNTAC 4 cut(s) 453, 485, 1206, 1238
BauI CACGAG 1 cut(s) 762
Bbv12I GWGCWC 1 cut(s) 617
BbvCI CCTCAGC 1 cut(s) 504
BbvI GCAGC 4 cut(s) 424, 698, 709, 734
BccI CCATC 2 cut(s) 136, 229
BceAI ACGGC 1 cut(s) 1180
BciT130I CCWGG 1 cut(s) 384
BcnI CCSGG 2 cut(s) 1130, 1131
BcoDI GTCTC 1 cut(s) 194
BfaI CTAG 1 cut(s) 488
BfmI CTRYAG 1 cut(s) 470
BfuAI ACCTGC 1 cut(s) 907
BisI GCNGC 4 cut(s) 438, 687, 698, 723
BlsI GCNGC 4 cut(s) 439, 688, 699, 724
Bme1390I CCNGG 3 cut(s) 384, 1130, 1131
Bme18I GGWCC 1 cut(s) 626
BmeT110I CYCGRG 2 cut(s) 616, 1129
BmgT120I GGNCC 1 cut(s) 626
BmiI GGNNCC 2 cut(s) 381, 627
BmrFI CCNGG 3 cut(s) 384, 1130, 1131
BmrI ACTGGG 1 cut(s) 251
BmsI GCATC 4 cut(s) 322, 381, 414, 1068
BmuI ACTGGG 1 cut(s) 251
BpmI CTGGAG 1 cut(s) 564
Bpu10I CCTNAGC 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 884
BpuMI CCSGG 2 cut(s) 1130, 1131
BsaJI CCNNGG 3 cut(s) 383, 1129, 1251
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 182, 1091
Bse1I ACTGG 5 cut(s) 257, 274, 298, 723, 1024
BseBI CCWGG 1 cut(s) 384
BseDI CCNNGG 3 cut(s) 383, 1129, 1251
BseGI GGATG 2 cut(s) 147, 337
BseLI CCNNNNNNNGG 3 cut(s) 78, 182, 1091
BseMII CTCAG 2 cut(s) 495, 800
BseNI ACTGG 5 cut(s) 257, 274, 298, 723, 1024
BseRI GAGGAG 3 cut(s) 528, 531, 992
BseSI GKGCMC 1 cut(s) 479
BseXI GCAGC 4 cut(s) 424, 698, 709, 734
BshFI GGCC 2 cut(s) 681, 1256
BsiHKAI GWGCWC 1 cut(s) 617
BsiHKCI CYCGRG 2 cut(s) 616, 1129
BsiSI CCGG 1 cut(s) 1130
BslFI GGGAC 1 cut(s) 1146
BslI CCNNNNNNNGG 3 cut(s) 78, 182, 1091
BsmAI GTCTC 1 cut(s) 194
BsmFI GGGAC 1 cut(s) 1146
BsmI GAATGC 1 cut(s) 1158
BsnI GGCC 2 cut(s) 681, 1256
BsoBI CYCGRG 2 cut(s) 616, 1129
Bsp1286I GDGCHC 3 cut(s) 479, 617, 1187
Bsp143I GATC 4 cut(s) 33, 709, 772, 1094
Bsp19I CCATGG 1 cut(s) 1251
BspACI CCGC 3 cut(s) 669, 695, 816
BspANI GGCC 2 cut(s) 681, 1256
BspCNI CTCAG 2 cut(s) 496, 799
BspLI GGNNCC 2 cut(s) 381, 627
BspMI ACCTGC 1 cut(s) 907
BspPI GGATC 4 cut(s) 28, 704, 767, 1102
BspQI GCTCTTC 2 cut(s) 459, 696
BsrI ACTGG 5 cut(s) 257, 274, 298, 723, 1024
BssECI CCNNGG 3 cut(s) 383, 1129, 1251
BssMI GATC 4 cut(s) 33, 709, 772, 1094
BssSI CACGAG 1 cut(s) 762
BssT1I CCWWGG 1 cut(s) 1251
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 1 cut(s) 384
Bst4CI ACNGT 4 cut(s) 481, 799, 961, 1003
Bst6I CTCTTC 3 cut(s) 459, 696, 969
BstC8I GCNNGC 4 cut(s) 396, 933, 937, 1183
BstDEI CTNAG 4 cut(s) 207, 504, 660, 786
BstDSI CCRYGG 1 cut(s) 1251
BstF5I GGATG 2 cut(s) 147, 337
BstKTI GATC 4 cut(s) 36, 712, 775, 1097
BstMAI GTCTC 1 cut(s) 194
BstMBI GATC 4 cut(s) 33, 709, 772, 1094
BstMWI GCNNNNNNNGC 2 cut(s) 320, 1253
BstNI CCWGG 1 cut(s) 384
BstNSI RCATGY 1 cut(s) 584
BstSCI CCNGG 3 cut(s) 382, 1128, 1129
BstSFI CTRYAG 1 cut(s) 470
BstSLI GKGCMC 1 cut(s) 479
BstV1I GCAGC 4 cut(s) 424, 698, 709, 734
BstX2I RGATCY 2 cut(s) 709, 772
BstYI RGATCY 2 cut(s) 709, 772
BsuRI GGCC 2 cut(s) 681, 1256
BtgI CCRYGG 1 cut(s) 1251
BtsCI GGATG 2 cut(s) 147, 337
BtsIMutI CAGTG 2 cut(s) 486, 966
BveI ACCTGC 1 cut(s) 907
Cac8I GCNNGC 4 cut(s) 396, 933, 937, 1183
CaiI CAGNNNCTG 1 cut(s) 263
Cfr13I GGNCC 1 cut(s) 626
Cfr9I CCCGGG 1 cut(s) 1129
CseI GACGC 1 cut(s) 419
Csp6I GTAC 3 cut(s) 253, 861, 1198
CviAII CATG 8 cut(s) 66, 167, 299, 407, 458, 581, 1244, 1252
CviQI GTAC 3 cut(s) 253, 861, 1198
DdeI CTNAG 4 cut(s) 207, 504, 660, 786
DpnI GATC 4 cut(s) 35, 711, 774, 1096
DpnII GATC 4 cut(s) 33, 709, 772, 1094
EaeI YGGCCR 1 cut(s) 1254
Eam1104I CTCTTC 3 cut(s) 459, 696, 969
EarI CTCTTC 3 cut(s) 459, 696, 969
Ecl136II GAGCTC 1 cut(s) 615
Eco130I CCWWGG 1 cut(s) 1251
Eco24I GRGCYC 2 cut(s) 617, 1187
Eco32I GATATC 1 cut(s) 1265
Eco47I GGWCC 1 cut(s) 626
Eco53kI GAGCTC 1 cut(s) 615
Eco88I CYCGRG 2 cut(s) 616, 1129
EcoICRI GAGCTC 1 cut(s) 615
EcoO109I RGGNCCY 1 cut(s) 626
EcoRII CCWGG 1 cut(s) 382
EcoRV GATATC 1 cut(s) 1265
EcoT14I CCWWGG 1 cut(s) 1251
EcoT38I GRGCYC 2 cut(s) 617, 1187
ErhI CCWWGG 1 cut(s) 1251
FaeI CATG 8 cut(s) 69, 170, 302, 410, 461, 584, 1247, 1255
FalI AAGNNNNNCTT 1 cut(s) 1302
FaqI GGGAC 1 cut(s) 1146
FatI CATG 8 cut(s) 65, 166, 298, 406, 457, 580, 1243, 1251
FauI CCCGC 1 cut(s) 662
Fnu4HI GCNGC 4 cut(s) 438, 687, 698, 723
FokI GGATG 2 cut(s) 154, 344
FriOI GRGCYC 2 cut(s) 617, 1187
Fsp4HI GCNGC 4 cut(s) 438, 687, 698, 723
FspBI CTAG 1 cut(s) 488
GluI GCNGC 4 cut(s) 438, 687, 698, 723
GsuI CTGGAG 1 cut(s) 564
HaeIII GGCC 2 cut(s) 681, 1256
HapII CCGG 1 cut(s) 1130
HgaI GACGC 1 cut(s) 419
Hin1II CATG 8 cut(s) 69, 170, 302, 410, 461, 584, 1247, 1255
HincII GTYRAC 1 cut(s) 1210
HindII GTYRAC 1 cut(s) 1210
HindIII AAGCTT 3 cut(s) 209, 886, 1281
HinfI GANTC 7 cut(s) 55, 150, 162, 172, 782, 835, 842
HpaI GTTAAC 1 cut(s) 1210
HpaII CCGG 1 cut(s) 1130
HphI GGTGA 1 cut(s) 1164
Hpy166II GTNNAC 3 cut(s) 404, 1172, 1210
Hpy188I TCNGA 6 cut(s) 54, 60, 155, 714, 869, 1099
Hpy188III TCNNGA 8 cut(s) 176, 618, 762, 839, 901, 1033, 1075, 1271
Hpy8I GTNNAC 3 cut(s) 404, 1172, 1210
Hpy99I CGWCG 1 cut(s) 1076
HpyAV CCTTC 6 cut(s) 47, 105, 150, 503, 806, 1250
HpyCH4III ACNGT 4 cut(s) 481, 799, 961, 1003
HpyCH4IV ACGT 2 cut(s) 1038, 1071
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 1253
HpyF3I CTNAG 4 cut(s) 207, 504, 660, 786
HpySE526I ACGT 2 cut(s) 1038, 1071
Hsp92II CATG 8 cut(s) 69, 170, 302, 410, 461, 584, 1247, 1255
KspAI GTTAAC 1 cut(s) 1210
Kzo9I GATC 4 cut(s) 33, 709, 772, 1094
LguI GCTCTTC 2 cut(s) 459, 696
LmnI GCTCC 1 cut(s) 307
Lsp1109I GCAGC 4 cut(s) 424, 698, 709, 734
LweI GCATC 4 cut(s) 322, 381, 414, 1068
MaeI CTAG 1 cut(s) 488
MaeII ACGT 2 cut(s) 1038, 1071
MaeIII GTNAC 5 cut(s) 265, 583, 793, 847, 1301
MalI GATC 4 cut(s) 35, 711, 774, 1096
MboI GATC 4 cut(s) 33, 709, 772, 1094
MfeI CAATTG 1 cut(s) 593
MflI RGATCY 2 cut(s) 709, 772
MhlI GDGCHC 3 cut(s) 479, 617, 1187
MlsI TGGCCA 1 cut(s) 1256
MluCI AATT 6 cut(s) 443, 593, 806, 909, 1066, 1217
MluNI TGGCCA 1 cut(s) 1256
MlyI GAGTC 3 cut(s) 49, 776, 836
MmeI TCCRAC 7 cut(s) 77, 127, 207, 268, 520, 531, 1129
Mox20I TGGCCA 1 cut(s) 1256
MscI TGGCCA 1 cut(s) 1256
MseI TTAA 4 cut(s) 48, 317, 1088, 1209
MslI CAYNNNNRTG 2 cut(s) 399, 422
Msp20I TGGCCA 1 cut(s) 1256
MspA1I CMGCKG 1 cut(s) 503
MspI CCGG 1 cut(s) 1130
MspR9I CCNGG 3 cut(s) 384, 1130, 1131
MunI CAATTG 1 cut(s) 593
Mva1269I GAATGC 1 cut(s) 1158
MvaI CCWGG 1 cut(s) 384
MwoI GCNNNNNNNGC 2 cut(s) 320, 1253
NciI CCSGG 2 cut(s) 1130, 1131
NcoI CCATGG 1 cut(s) 1251
NdeII GATC 4 cut(s) 33, 709, 772, 1094
NlaIII CATG 8 cut(s) 69, 170, 302, 410, 461, 584, 1247, 1255
NlaIV GGNNCC 2 cut(s) 381, 627
NmuCI GTSAC 1 cut(s) 583
NspI RCATGY 1 cut(s) 584
OliI CACNNNNGTG 1 cut(s) 399
PaeR7I CTCGAG 1 cut(s) 616
PciI ACATGT 1 cut(s) 580
PciSI GCTCTTC 2 cut(s) 459, 696
PcsI WCGNNNNNNNCGW 1 cut(s) 1044
PctI GAATGC 1 cut(s) 1158
PfeI GAWTC 4 cut(s) 150, 162, 172, 835
PkrI GCNGC 4 cut(s) 439, 688, 699, 724
PleI GAGTC 3 cut(s) 49, 776, 836
PpsI GAGTC 3 cut(s) 49, 776, 836
PpuMI RGGWCCY 1 cut(s) 626
PscI ACATGT 1 cut(s) 580
PshBI ATTAAT 1 cut(s) 1088
PsiI TTATAA 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 617
Psp1406I AACGTT 1 cut(s) 1038
Psp5II RGGWCCY 1 cut(s) 626
Psp6I CCWGG 1 cut(s) 382
PspGI CCWGG 1 cut(s) 382
PspN4I GGNNCC 2 cut(s) 381, 627
PspPI GGNCC 1 cut(s) 626
PspPPI RGGWCCY 1 cut(s) 626
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 2 cut(s) 709, 772
PvuII CAGCTG 1 cut(s) 503
RsaI GTAC 3 cut(s) 254, 862, 1199
RsaNI GTAC 3 cut(s) 253, 861, 1198
RseI CAYNNNNRTG 2 cut(s) 399, 422
SacI GAGCTC 1 cut(s) 617
SapI GCTCTTC 2 cut(s) 459, 696
SaqAI TTAA 4 cut(s) 48, 317, 1088, 1209
SatI GCNGC 4 cut(s) 438, 687, 698, 723
Sau3AI GATC 4 cut(s) 33, 709, 772, 1094
Sau96I GGNCC 1 cut(s) 626
SchI GAGTC 3 cut(s) 49, 776, 836
ScrFI CCNGG 3 cut(s) 384, 1130, 1131
SduI GDGCHC 3 cut(s) 479, 617, 1187
SfaNI GCATC 4 cut(s) 322, 381, 414, 1068
SfcI CTRYAG 1 cut(s) 470
Sfr274I CTCGAG 1 cut(s) 616
SinI GGWCC 1 cut(s) 626
SlaI CTCGAG 1 cut(s) 616
SmaI CCCGGG 1 cut(s) 1131
SmiMI CAYNNNNRTG 2 cut(s) 399, 422
SmlI CTYRAG 2 cut(s) 616, 899
SmoI CTYRAG 2 cut(s) 616, 899
Sse9I AATT 6 cut(s) 443, 593, 806, 909, 1066, 1217
SsiI CCGC 3 cut(s) 669, 695, 816
SspMI CTAG 1 cut(s) 488
SstI GAGCTC 1 cut(s) 617
StyD4I CCNGG 3 cut(s) 382, 1128, 1129
StyI CCWWGG 1 cut(s) 1251
TaaI ACNGT 4 cut(s) 481, 799, 961, 1003
TaiI ACGT 2 cut(s) 1041, 1074
TaqI TCGA 3 cut(s) 135, 617, 1074
TasI AATT 6 cut(s) 443, 593, 806, 909, 1066, 1217
TfiI GAWTC 4 cut(s) 150, 162, 172, 835
Tru1I TTAA 4 cut(s) 48, 317, 1088, 1209
Tru9I TTAA 4 cut(s) 48, 317, 1088, 1209
TscAI CASTG 2 cut(s) 486, 966
TseFI GTSAC 1 cut(s) 583
TseI GCWGC 4 cut(s) 437, 686, 697, 722
Tsp45I GTSAC 1 cut(s) 583
TspDTI ATGAA 4 cut(s) 54, 474, 958, 1232
TspMI CCCGGG 1 cut(s) 1129
TspRI CASTG 2 cut(s) 486, 966
VpaK11BI GGWCC 1 cut(s) 626
VspI ATTAAT 1 cut(s) 1088
XapI RAATTY 1 cut(s) 806
XceI RCATGY 1 cut(s) 584
XhoI CTCGAG 1 cut(s) 616
XmaI CCCGGG 1 cut(s) 1129
XspI CTAG 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.