AT1G57650

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0001639
Physical Location & Seq
Forward (+)
21351166 .. 21354311
3146 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G57650.1

Sequence Viewer

Length: 2130 bp
ATGGTCCCGTGGTCCGCGACGGTTAGTGGTGCTGTTAATATTTCTAACACATCAAACTATACTCTTAGTGATTATATATTAACAAGACGTATGTATAAATTGATCTTCTTCTTTGTTAGGGTTGATGAAACAGACATGATTGAAAACATCGCCGCTTATATTTCCAGCCGTTTCCAGAATAGCGCAGTCATCGAGGATATCAAAGGAAGCTATCCAAAACCTCGTTTTGATGAGGATCTTCAAATCTTCTGCAAGTATGCTTTTAACCAAAAGACCCCTGAAGATGGTTTCGATGAACTAGCTCGTGAAATTACATACCATGTCGGTGAACTTCCGTTAGGACTAAAGGTTATTGGATCCCACTTTCGTGGATTGTCCAAGGAGCAGTGGCCAATGGAAGTATCAAGGTTAAGGACGTACCGTAATGGAGATATTGAGCGCATTTTGAAGTTCAGTTATGATGCTTTATGTGATGAAGATAAAGATTTATTCCTTCATATAGCTTGCTTTTTCAACATGGAAAAAATAACGAAAGTGAAAGAACTTTTTGGCCACAGATTCAAGGATTTGAGACAAAGCCTTCACATTTTAGAGATGAAATCTCTTATATCTATTGAACATACTGATCTTGAAGATTCCGAGTATTATGAGTCCATAAACATGCGTAACTTGCTGGTCCAACTAGGTCAAGAAATCGTCCGTAAAGAATCCGTTCTTGAGCCTGGTCAACGCCGATTTTTGATTGATTATAAAGATATTTGTGCAGTAGTCTCTGGTCATACAACAATTACTGGAAGTGTTGTAGGCATAGACTCCAAGAATTGGTTAAGTATAACTGAGAAATCCTTTAAAGGAATGTCTAATCTCCAGTTCTTAAGAGTCAAAAACGATTTATATCATCCAAACATTATATCTTCTCCGGGACCTCTGACTTTTATATCCCCGAAGCTACGATTACTAGATTGGTCGTGTTTCCCGATGACATCTTTGCGTTTTATTAATAATCTGGAATTCCTTGTCGAATTAAGGATGTGTTACAGCAAACTTGAGAAGCTGTGGGACGGAATTCAACTGGTTAGAAATCTCAAGCATATGGATTTGACAGATTCTAGAAACCTGAAGGAGCTTCCTAATCTCTCAATGGCTACTAATCTTAAGAATTTAAACCTTGAAAGATGTTCAAGTCTGGTGGAGCTTCCTTCCTCTATTGGAAATGCAACTAGTCTCCATGACTTAAGACTTTTTAAATGTTCTAGTCTGGTGGAGCTCCCTTTTTCAATTGGGAATTTAACTAATCTTTGGAAATTAGATCTTCGTGAATGTTCAAGTCTTGTATCACTCCCGCAGCTTCCAGATTCCATAATGGTCCTAAATGCACGAAATTGCGAGTCCCTAGAGAAACTAGATTGCTCCTTTTACAATCCAGGTATTCTTCTCAACTTCGTTAACTGCTTCAACCTAAATCAAGAAGCAAGAGATCTCCTCATCGAGACATCAACTGTTAATTTTGTGGTCTTACCTGGTAAAGAAGTGCCTGCGTGCTTCACTTACAGAAGTCATGGGAGTTCCGTATCAGTGAAGGTTAATCAAAAGCTTCTTCATACGTCAACCAAATTTAAGGCTTGCATCTTGTTTGAGAACGAGGTCGATAATGAAACTTATTATTTTGATTTGGACACACTTTGTGTGTATACGAAGACGAATAAGGATTGCATCTTGTTGGATAATAAAGGTGAAGATGATGAGGTTGGTATTCAGAAACGAGGGTTGGTGTCTTGTCGCATCGGTTCCGAATGGCGTTTCTCTGAATGGTATCCATTTATAACGGATCATCTATACATTTTCGAAGTTGAAGCAAAGGAGGTGACTTCCACAGAGCTTATTTTTTATTTCGAGATATTCGATGAGTATTCCAAGGCTAGGGAGATAAAAGAATGCGGGATAATCCACCTCTTGGAACATCATGTTGACGACGAAGAAAAGATGGATACAATTGAGAAGGAACCCAAGATCTTAATCGCACCTAAAATGGATTGCCATTCGGAGCCAATGCCACTGGGAAAATGCATTGTGGTCTATGGTCTACAGATTGTTTACTTGAAACAATACATCTTATATAGGTCAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_3 NB-ARC TIR

Protein Analysis

709

Amino Acids

82.04

Weight (kDa)

5.5

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_ROQ1 PF23282 159 - 237 1.1e-08 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 317 - 438 2.1e-06 Leucine-rich repeat region
LRR_3 PF07725 338 - 357 2.3e-09 Leucine Rich Repeat
C-JID PF20160 506 - 653 1.4e-09 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 750, 1823
AccB7I CCANNNNNTGG 2 cut(s) 822, 1954
AccI GTMKAC 2 cut(s) 1691, 2083
AccII CGCG 1 cut(s) 17
AciI CCGC 4 cut(s) 15, 153, 1343, 1938
AclWI GGATC 4 cut(s) 243, 351, 364, 1836
AcoI YGGCCR 2 cut(s) 389, 550
AcsI RAATTY 5 cut(s) 1010, 1065, 1159, 1285, 1613
AcuI CTGAAG 2 cut(s) 300, 1139
AdeI CACNNNGTG 1 cut(s) 1685
AfaI GTAC 1 cut(s) 419
AfiI CCNNNNNNNGG 4 cut(s) 284, 822, 1920, 1954
AflII CTTAAG 3 cut(s) 874, 1154, 1234
AhlI ACTAGT 1 cut(s) 1220
AjnI CCWGG 3 cut(s) 721, 1423, 1519
AjuI GAANNNNNNNTTGG 2 cut(s) 1751, 1783
AleI CACNNNNGTG 1 cut(s) 366
Alw21I GWGCWC 1 cut(s) 1269
Alw26I GTCTC 4 cut(s) 565, 775, 1229, 1484
AlwI GGATC 4 cut(s) 243, 351, 364, 1836
AoxI GGCC 2 cut(s) 389, 550
ApeKI GCWGC 1 cut(s) 1345
ApoI RAATTY 5 cut(s) 1010, 1065, 1159, 1285, 1613
AseI ATTAAT 1 cut(s) 999
Asp700I GAANNNNTTC 1 cut(s) 711
AspLEI GCGC 2 cut(s) 185, 441
AspS9I GGNCC 5 cut(s) 4, 12, 676, 923, 1366
AsuC2I CCSGG 1 cut(s) 921
AsuHPI GGTGA 3 cut(s) 338, 1745, 1876
AsuII TTCGAA 1 cut(s) 1845
AvaII GGWCC 5 cut(s) 4, 12, 676, 923, 1366
BalI TGGCCA 2 cut(s) 391, 552
BamHI GGATCC 1 cut(s) 356
BanII GRGCYC 1 cut(s) 1269
BauI CACGAG 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 1703
Bbv12I GWGCWC 1 cut(s) 1269
BbvI GCAGC 1 cut(s) 1357
BccI CCATC 2 cut(s) 278, 1978
BceAI ACGGC 1 cut(s) 153
BciT130I CCWGG 3 cut(s) 723, 1425, 1521
BciVI GTATCC 2 cut(s) 1824, 1981
BcnI CCSGG 1 cut(s) 921
BcoDI GTCTC 4 cut(s) 565, 775, 1229, 1484
BcuI ACTAGT 1 cut(s) 1220
BfaI CTAG 9 cut(s) 299, 683, 959, 1110, 1221, 1254, 1394, 1403, 1920
BfmI CTRYAG 1 cut(s) 2084
BfrI CTTAAG 3 cut(s) 874, 1154, 1234
BfuI GTATCC 2 cut(s) 1824, 1981
BglII AGATCT 3 cut(s) 1309, 1477, 2010
BisI GCNGC 2 cut(s) 153, 1346
BlsI GCNGC 2 cut(s) 154, 1347
Bme1390I CCNGG 4 cut(s) 723, 921, 1425, 1521
Bme18I GGWCC 5 cut(s) 4, 12, 676, 923, 1366
BmgT120I GGNCC 5 cut(s) 4, 12, 676, 923, 1366
BmiI GGNNCC 6 cut(s) 6, 358, 924, 1789, 2004, 2046
BmrFI CCNGG 4 cut(s) 723, 921, 1425, 1521
BmrI ACTGGG 1 cut(s) 2066
BmsI GCATC 4 cut(s) 451, 1635, 1722, 1791
BmuI ACTGGG 1 cut(s) 2066
BpiI GAAGAC 1 cut(s) 1703
BplI GAGNNNNNCTC 2 cut(s) 1467, 1499
BpmI CTGGAG 1 cut(s) 851
Bpu14I TTCGAA 1 cut(s) 1845
BpuEI CTTGAG 3 cut(s) 737, 1067, 1070
BpuMI CCSGG 1 cut(s) 921
BsaBI GATNNNNATC 3 cut(s) 234, 894, 2015
BsaJI CCNNGG 3 cut(s) 8, 378, 1914
Bsc4I CCNNNNNNNGG 4 cut(s) 284, 822, 1920, 1954
Bse1I ACTGG 4 cut(s) 796, 868, 1077, 2061
Bse8I GATNNNNATC 3 cut(s) 234, 894, 2015
BseBI CCWGG 3 cut(s) 723, 1425, 1521
BseDI CCNNGG 3 cut(s) 8, 378, 1914
BseGI GGATG 2 cut(s) 898, 1035
BseJI GATNNNNATC 3 cut(s) 234, 894, 2015
BseLI CCNNNNNNNGG 4 cut(s) 284, 822, 1920, 1954
BseMII CTCAG 1 cut(s) 828
BseNI ACTGG 4 cut(s) 796, 868, 1077, 2061
BseRI GAGGAG 1 cut(s) 1472
BseXI GCAGC 1 cut(s) 1357
BsgI GTGCAG 1 cut(s) 783
Bsh1236I CGCG 1 cut(s) 17
BshFI GGCC 2 cut(s) 391, 552
BsiHKAI GWGCWC 1 cut(s) 1269
BsiSI CCGG 1 cut(s) 920
BslFI GGGAC 3 cut(s) 936, 1073, 1375
BslI CCNNNNNNNGG 4 cut(s) 284, 822, 1920, 1954
BsmAI GTCTC 4 cut(s) 565, 775, 1229, 1484
BsmFI GGGAC 3 cut(s) 936, 1073, 1375
BsmI GAATGC 1 cut(s) 1940
BsnI GGCC 2 cut(s) 391, 552
Bsp119I TTCGAA 1 cut(s) 1845
Bsp1286I GDGCHC 1 cut(s) 1269
Bsp143I GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
BspACI CCGC 4 cut(s) 15, 153, 1343, 1938
BspANI GGCC 2 cut(s) 391, 552
BspCNI CTCAG 1 cut(s) 829
BspFNI CGCG 1 cut(s) 17
BspLI GGNNCC 6 cut(s) 6, 358, 924, 1789, 2004, 2046
BspPI GGATC 4 cut(s) 243, 351, 364, 1836
BspT104I TTCGAA 1 cut(s) 1845
BspTI CTTAAG 3 cut(s) 874, 1154, 1234
BsrI ACTGG 4 cut(s) 796, 868, 1077, 2061
BssECI CCNNGG 3 cut(s) 8, 378, 1914
BssMI GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
BssNAI GTATAC 1 cut(s) 1692
BssSI CACGAG 1 cut(s) 303
BssT1I CCWWGG 2 cut(s) 378, 1914
Bst1107I GTATAC 1 cut(s) 1692
Bst2BI CACGAG 1 cut(s) 303
Bst2UI CCWGG 3 cut(s) 723, 1425, 1521
Bst4CI ACNGT 3 cut(s) 22, 422, 1501
BstAFI CTTAAG 3 cut(s) 874, 1154, 1234
BstBI TTCGAA 1 cut(s) 1845
BstC8I GCNNGC 4 cut(s) 505, 1536, 1540, 1624
BstDEI CTNAG 2 cut(s) 65, 837
BstDSI CCRYGG 1 cut(s) 8
BstF5I GGATG 2 cut(s) 898, 1035
BstFNI CGCG 1 cut(s) 17
BstHHI GCGC 2 cut(s) 185, 441
BstKTI GATC 8 cut(s) 105, 238, 359, 628, 1312, 1480, 1831, 2013
BstMAI GTCTC 4 cut(s) 565, 775, 1229, 1484
BstMBI GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
BstMWI GCNNNNNNNGC 1 cut(s) 670
BstNI CCWGG 3 cut(s) 723, 1425, 1521
BstNSI RCATGY 1 cut(s) 664
BstSCI CCNGG 4 cut(s) 721, 919, 1423, 1519
BstSFI CTRYAG 1 cut(s) 2084
BstUI CGCG 1 cut(s) 17
BstV1I GCAGC 1 cut(s) 1357
BstV2I GAAGAC 1 cut(s) 1703
BstX2I RGATCY 5 cut(s) 235, 356, 1309, 1477, 2010
BstXI CCANNNNNNTGG 1 cut(s) 368
BstYI RGATCY 5 cut(s) 235, 356, 1309, 1477, 2010
BstZ17I GTATAC 1 cut(s) 1692
BsuI GTATCC 2 cut(s) 1824, 1981
BsuRI GGCC 2 cut(s) 391, 552
BtgI CCRYGG 1 cut(s) 8
BtgZI GCGATG 1 cut(s) 133
BtsCI GGATG 2 cut(s) 898, 1035
BtsI GCAGTG 1 cut(s) 392
BtsIMutI CAGTG 3 cut(s) 392, 1581, 2054
Cac8I GCNNGC 4 cut(s) 505, 1536, 1540, 1624
CfoI GCGC 2 cut(s) 185, 441
Cfr13I GGNCC 5 cut(s) 4, 12, 676, 923, 1366
CsiI ACCWGGT 1 cut(s) 1519
Csp6I GTAC 1 cut(s) 418
CspCI CAANNNNNGTGG 2 cut(s) 1170, 1205
CviAII CATG 7 cut(s) 136, 320, 517, 661, 1229, 1559, 1964
CviQI GTAC 1 cut(s) 418
DdeI CTNAG 2 cut(s) 65, 837
DpnI GATC 8 cut(s) 104, 237, 358, 627, 1311, 1479, 1830, 2012
DpnII GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
DraI TTTAAA 3 cut(s) 850, 1164, 1246
DraIII CACNNNGTG 1 cut(s) 1685
EaeI YGGCCR 2 cut(s) 389, 550
Ecl136II GAGCTC 1 cut(s) 1267
Eco130I CCWWGG 2 cut(s) 378, 1914
Eco24I GRGCYC 1 cut(s) 1269
Eco32I GATATC 1 cut(s) 199
Eco47I GGWCC 5 cut(s) 4, 12, 676, 923, 1366
Eco53kI GAGCTC 1 cut(s) 1267
Eco57I CTGAAG 2 cut(s) 300, 1139
EcoICRI GAGCTC 1 cut(s) 1267
EcoO109I RGGNCCY 1 cut(s) 923
EcoRI GAATTC 2 cut(s) 1010, 1065
EcoRII CCWGG 3 cut(s) 721, 1423, 1519
EcoRV GATATC 1 cut(s) 199
EcoT14I CCWWGG 2 cut(s) 378, 1914
EcoT22I ATGCAT 1 cut(s) 2069
EcoT38I GRGCYC 1 cut(s) 1269
ErhI CCWWGG 2 cut(s) 378, 1914
FaeI CATG 7 cut(s) 139, 323, 520, 664, 1232, 1562, 1967
FaqI GGGAC 3 cut(s) 936, 1073, 1375
FatI CATG 7 cut(s) 135, 319, 516, 660, 1228, 1558, 1963
FauI CCCGC 2 cut(s) 1350, 1931
FauNDI CATATG 1 cut(s) 1092
FblI GTMKAC 2 cut(s) 1691, 2083
Fnu4HI GCNGC 2 cut(s) 153, 1346
FokI GGATG 2 cut(s) 885, 1042
FriOI GRGCYC 1 cut(s) 1269
Fsp4HI GCNGC 2 cut(s) 153, 1346
FspBI CTAG 9 cut(s) 299, 683, 959, 1110, 1221, 1254, 1394, 1403, 1920
GlaI GCGC 2 cut(s) 184, 440
GluI GCNGC 2 cut(s) 153, 1346
GsuI CTGGAG 1 cut(s) 851
HaeIII GGCC 2 cut(s) 391, 552
HapII CCGG 1 cut(s) 920
HhaI GCGC 2 cut(s) 185, 441
Hin1II CATG 7 cut(s) 139, 323, 520, 664, 1232, 1562, 1967
Hin6I GCGC 2 cut(s) 183, 439
HinP1I GCGC 2 cut(s) 183, 439
HincII GTYRAC 4 cut(s) 728, 1447, 1608, 1969
HindII GTYRAC 4 cut(s) 728, 1447, 1608, 1969
HindIII AAGCTT 1 cut(s) 1592
HinfI GANTC 9 cut(s) 558, 635, 650, 707, 812, 879, 1106, 1355, 1388
HpaI GTTAAC 1 cut(s) 1447
HpaII CCGG 1 cut(s) 920
HphI GGTGA 3 cut(s) 338, 1745, 1876
Hpy166II GTNNAC 8 cut(s) 329, 728, 1447, 1608, 1692, 1969, 2084, 2095
Hpy188I TCNGA 7 cut(s) 640, 930, 1758, 1792, 1807, 2044, 2125
Hpy8I GTNNAC 8 cut(s) 329, 728, 1447, 1608, 1692, 1969, 2084, 2095
Hpy99I CGWCG 2 cut(s) 22, 1976
HpyAV CCTTC 6 cut(s) 503, 590, 1114, 1209, 1573, 1993
HpyCH4III ACNGT 3 cut(s) 22, 422, 1501
HpyCH4IV ACGT 3 cut(s) 88, 416, 1604
HpyCH4V TGCA 7 cut(s) 252, 764, 1217, 1376, 1626, 1713, 2067
HpyF10VI GCNNNNNNNGC 1 cut(s) 670
HpyF3I CTNAG 2 cut(s) 65, 837
HpySE526I ACGT 3 cut(s) 88, 416, 1604
Hsp92II CATG 7 cut(s) 139, 323, 520, 664, 1232, 1562, 1967
HspAI GCGC 2 cut(s) 183, 439
KspAI GTTAAC 1 cut(s) 1447
Kzo9I GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
LmnI GCTCC 7 cut(s) 382, 1123, 1192, 1264, 1272, 1415, 2044
Lsp1109I GCAGC 1 cut(s) 1357
LweI GCATC 4 cut(s) 451, 1635, 1722, 1791
MabI ACCWGGT 1 cut(s) 1519
MaeI CTAG 9 cut(s) 299, 683, 959, 1110, 1221, 1254, 1394, 1403, 1920
MaeII ACGT 3 cut(s) 88, 416, 1604
MaeIII GTNAC 3 cut(s) 665, 1034, 1864
MalI GATC 8 cut(s) 104, 237, 358, 627, 1311, 1479, 1830, 2012
MboI GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
MfeI CAATTG 2 cut(s) 1278, 1992
MflI RGATCY 5 cut(s) 235, 356, 1309, 1477, 2010
MhlI GDGCHC 1 cut(s) 1269
MlsI TGGCCA 2 cut(s) 391, 552
MluNI TGGCCA 2 cut(s) 391, 552
MlyI GAGTC 4 cut(s) 659, 806, 888, 1397
MmeI TCCRAC 2 cut(s) 703, 1701
Mox20I TGGCCA 2 cut(s) 391, 552
Mph1103I ATGCAT 1 cut(s) 2069
MroXI GAANNNNTTC 1 cut(s) 711
MscI TGGCCA 2 cut(s) 391, 552
MslI CAYNNNNRTG 3 cut(s) 324, 366, 659
Msp20I TGGCCA 2 cut(s) 391, 552
MspCI CTTAAG 3 cut(s) 874, 1154, 1234
MspI CCGG 1 cut(s) 920
MspR9I CCNGG 4 cut(s) 723, 921, 1425, 1521
MunI CAATTG 2 cut(s) 1278, 1992
Mva1269I GAATGC 1 cut(s) 1940
MvaI CCWGG 3 cut(s) 723, 1425, 1521
MvnI CGCG 1 cut(s) 17
MwoI GCNNNNNNNGC 1 cut(s) 670
NciI CCSGG 1 cut(s) 921
NdeI CATATG 1 cut(s) 1092
NdeII GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
NlaIII CATG 7 cut(s) 139, 323, 520, 664, 1232, 1562, 1967
NlaIV GGNNCC 6 cut(s) 6, 358, 924, 1789, 2004, 2046
NmuCI GTSAC 1 cut(s) 1864
NsiI ATGCAT 1 cut(s) 2069
NspI RCATGY 1 cut(s) 664
NspV TTCGAA 1 cut(s) 1845
OliI CACNNNNGTG 1 cut(s) 366
PcsI WCGNNNNNNNCGW 2 cut(s) 974, 1899
PctI GAATGC 1 cut(s) 1940
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 5 cut(s) 558, 635, 707, 1106, 1355
PflMI CCANNNNNTGG 2 cut(s) 822, 1954
PfoI TCCNGGA 1 cut(s) 919
PkrI GCNGC 2 cut(s) 154, 1347
PleI GAGTC 4 cut(s) 658, 806, 887, 1396
PpsI GAGTC 4 cut(s) 658, 806, 887, 1396
PpuMI RGGWCCY 1 cut(s) 923
PshBI ATTAAT 1 cut(s) 999
PsiI TTATAA 2 cut(s) 750, 1823
Psp124BI GAGCTC 1 cut(s) 1269
Psp5II RGGWCCY 1 cut(s) 923
Psp6I CCWGG 3 cut(s) 721, 1423, 1519
PspGI CCWGG 3 cut(s) 721, 1423, 1519
PspN4I GGNNCC 6 cut(s) 6, 358, 924, 1789, 2004, 2046
PspPI GGNCC 5 cut(s) 4, 12, 676, 923, 1366
PspPPI RGGWCCY 1 cut(s) 923
PsuI RGATCY 5 cut(s) 235, 356, 1309, 1477, 2010
RsaI GTAC 1 cut(s) 419
RsaNI GTAC 1 cut(s) 418
RseI CAYNNNNRTG 3 cut(s) 324, 366, 659
SacI GAGCTC 1 cut(s) 1269
SatI GCNGC 2 cut(s) 153, 1346
Sau3AI GATC 8 cut(s) 102, 235, 356, 625, 1309, 1477, 1828, 2010
Sau96I GGNCC 5 cut(s) 4, 12, 676, 923, 1366
SchI GAGTC 4 cut(s) 659, 806, 888, 1397
ScrFI CCNGG 4 cut(s) 723, 921, 1425, 1521
SduI GDGCHC 1 cut(s) 1269
SexAI ACCWGGT 1 cut(s) 1519
SfaNI GCATC 4 cut(s) 451, 1635, 1722, 1791
SfcI CTRYAG 1 cut(s) 2084
SfuI TTCGAA 1 cut(s) 1845
SinI GGWCC 5 cut(s) 4, 12, 676, 923, 1366
SmiMI CAYNNNNRTG 3 cut(s) 324, 366, 659
SmlI CTYRAG 6 cut(s) 716, 874, 1046, 1085, 1154, 1234
SmoI CTYRAG 6 cut(s) 716, 874, 1046, 1085, 1154, 1234
SpeI ACTAGT 1 cut(s) 1220
SsiI CCGC 4 cut(s) 15, 153, 1343, 1938
SspI AATATT 1 cut(s) 40
SspMI CTAG 9 cut(s) 299, 683, 959, 1110, 1221, 1254, 1394, 1403, 1920
SstI GAGCTC 1 cut(s) 1269
StyD4I CCNGG 4 cut(s) 721, 919, 1423, 1519
StyI CCWWGG 2 cut(s) 378, 1914
TaaI ACNGT 3 cut(s) 22, 422, 1501
TaiI ACGT 3 cut(s) 91, 419, 1607
TaqI TCGA 8 cut(s) 192, 291, 1020, 1488, 1647, 1845, 1893, 1902
TauI GCSGC 1 cut(s) 155
TfiI GAWTC 5 cut(s) 558, 635, 707, 1106, 1355
TscAI CASTG 3 cut(s) 392, 1581, 2061
TseFI GTSAC 1 cut(s) 1864
TseI GCWGC 1 cut(s) 1345
Tsp45I GTSAC 1 cut(s) 1864
TspDTI ATGAA 7 cut(s) 141, 309, 485, 489, 611, 1589, 1668
TspGWI ACGGA 6 cut(s) 324, 689, 700, 1077, 1558, 1841
TspRI CASTG 3 cut(s) 392, 1581, 2061
Van91I CCANNNNNTGG 2 cut(s) 822, 1954
Vha464I CTTAAG 3 cut(s) 874, 1154, 1234
VpaK11BI GGWCC 5 cut(s) 4, 12, 676, 923, 1366
VspI ATTAAT 1 cut(s) 999
XapI RAATTY 5 cut(s) 1010, 1065, 1159, 1285, 1613
XbaI TCTAGA 1 cut(s) 1109
XceI RCATGY 1 cut(s) 664
XmiI GTMKAC 2 cut(s) 1691, 2083
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 9 cut(s) 299, 683, 959, 1110, 1221, 1254, 1394, 1403, 1920
Zsp2I ATGCAT 1 cut(s) 2069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.