Disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 33 - 209 | 5.2e-60 | TIR domain |
| TIR_2 | PF13676 | 35 - 130 | 1.1e-14 | TIR domain |
| NB-ARC | PF00931 | 224 - 386 | 9e-12 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 454 - 522 | 1.5e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 634 - 652 | 6.3e-09 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 680 - 781 | 1.3e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 467, 3083 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3059 |
| Acc16I | TGCGCA | 1 cut(s) | 55 |
| AccB1I | GGYRCC | 1 cut(s) | 2749 |
| AccI | GTMKAC | 2 cut(s) | 809, 3063 |
| AccII | CGCG | 2 cut(s) | 266, 2391 |
| AccIII | TCCGGA | 1 cut(s) | 2572 |
| AciI | CCGC | 3 cut(s) | 1774, 1921, 1961 |
| AclWI | GGATC | 5 cut(s) | 358, 380, 393, 722, 1863 |
| AcoI | YGGCCR | 1 cut(s) | 1958 |
| AcsI | RAATTY | 8 cut(s) | 347, 415, 696, 1102, 1160, 1754, 2487, 2800 |
| AcuI | CTGAAG | 1 cut(s) | 2504 |
| AcvI | CACGTG | 1 cut(s) | 605 |
| AfaI | GTAC | 8 cut(s) | 132, 1802, 1894, 1901, 2462, 2728, 2759, 3005 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 90, 911, 1172, 1293 |
| AflII | CTTAAG | 2 cut(s) | 1759, 2335 |
| AflIII | ACRYGT | 1 cut(s) | 1871 |
| AgeI | ACCGGT | 1 cut(s) | 817 |
| AjnI | CCWGG | 1 cut(s) | 1594 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3029, 3061 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2691, 2723 |
| Alw21I | GWGCWC | 4 cut(s) | 637, 1701, 2085, 2141 |
| Alw26I | GTCTC | 3 cut(s) | 472, 2614, 2658 |
| Alw44I | GTGCAC | 1 cut(s) | 2137 |
| AlwI | GGATC | 5 cut(s) | 358, 380, 393, 722, 1863 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2122 |
| Ama87I | CYCGRG | 2 cut(s) | 1571, 2830 |
| Aor13HI | TCCGGA | 1 cut(s) | 2572 |
| AoxI | GGCC | 3 cut(s) | 1958, 2378, 2813 |
| ApaLI | GTGCAC | 1 cut(s) | 2137 |
| ApeKI | GCWGC | 1 cut(s) | 2155 |
| ApoI | RAATTY | 8 cut(s) | 347, 415, 696, 1102, 1160, 1754, 2487, 2800 |
| AsiGI | ACCGGT | 1 cut(s) | 817 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 428, 863, 1557, 2052 |
| AspA2I | CCTAGG | 1 cut(s) | 910 |
| AspLEI | GCGC | 1 cut(s) | 56 |
| AspS9I | GGNCC | 1 cut(s) | 704 |
| AsuC2I | CCSGG | 1 cut(s) | 2739 |
| AsuHPI | GGTGA | 3 cut(s) | 899, 1793, 2896 |
| AsuII | TTCGAA | 3 cut(s) | 575, 1179, 1997 |
| AvaI | CYCGRG | 2 cut(s) | 1571, 2830 |
| AvaII | GGWCC | 1 cut(s) | 704 |
| AvrII | CCTAGG | 1 cut(s) | 910 |
| BaeGI | GKGCMC | 1 cut(s) | 2141 |
| BamHI | GGATCC | 1 cut(s) | 385 |
| BanI | GGYRCC | 1 cut(s) | 2749 |
| BanII | GRGCYC | 5 cut(s) | 637, 1247, 1572, 1701, 2085 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2906, 2938 |
| BauI | CACGAG | 1 cut(s) | 2140 |
| BbrPI | CACGTG | 1 cut(s) | 605 |
| BbsI | GAAGAC | 2 cut(s) | 421, 2378 |
| Bbv12I | GWGCWC | 4 cut(s) | 637, 1701, 2085, 2141 |
| BbvI | GCAGC | 1 cut(s) | 2142 |
| BccI | CCATC | 7 cut(s) | 397, 607, 1005, 1070, 1117, 1166, 2095 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 256, 290, 1169, 1203 |
| BciT130I | CCWGG | 1 cut(s) | 1596 |
| BcnI | CCSGG | 1 cut(s) | 2739 |
| BcoDI | GTCTC | 3 cut(s) | 472, 2614, 2658 |
| BfaI | CTAG | 9 cut(s) | 282, 735, 911, 986, 1535, 1623, 1847, 2219, 2514 |
| BfmI | CTRYAG | 2 cut(s) | 376, 2823 |
| BfrI | CTTAAG | 2 cut(s) | 1759, 2335 |
| BglII | AGATCT | 2 cut(s) | 2304, 2935 |
| BisI | GCNGC | 2 cut(s) | 1961, 2156 |
| BlnI | CCTAGG | 1 cut(s) | 910 |
| BlsI | GCNGC | 2 cut(s) | 1962, 2157 |
| Bme1390I | CCNGG | 2 cut(s) | 1596, 2739 |
| Bme18I | GGWCC | 1 cut(s) | 704 |
| BmeT110I | CYCGRG | 2 cut(s) | 1571, 2830 |
| BmgT120I | GGNCC | 1 cut(s) | 704 |
| BmiI | GGNNCC | 5 cut(s) | 387, 654, 705, 2174, 2751 |
| BmrFI | CCNGG | 2 cut(s) | 1596, 2739 |
| BmrI | ACTGGG | 1 cut(s) | 538 |
| BmuI | ACTGGG | 1 cut(s) | 538 |
| BpiI | GAAGAC | 2 cut(s) | 421, 2378 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 129, 161, 469, 501, 2144, 2176 |
| BpmI | CTGGAG | 2 cut(s) | 2099, 2636 |
| Bpu14I | TTCGAA | 3 cut(s) | 575, 1179, 1997 |
| BpuEI | CTTGAG | 4 cut(s) | 1687, 2053, 2312, 2812 |
| BpuMI | CCSGG | 1 cut(s) | 2739 |
| BsaAI | YACGTR | 2 cut(s) | 134, 605 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1037 |
| BsaJI | CCNNGG | 4 cut(s) | 118, 910, 1292, 1595 |
| BsaWI | WCCGGW | 3 cut(s) | 817, 1053, 2572 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 791, 821 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 90, 911, 1172, 1293 |
| Bse118I | RCCGGY | 2 cut(s) | 817, 1956 |
| Bse1I | ACTGG | 6 cut(s) | 514, 533, 973, 1982, 2619, 2753 |
| Bse3DI | GCAATG | 2 cut(s) | 558, 729 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1037 |
| BseAI | TCCGGA | 1 cut(s) | 2572 |
| BseBI | CCWGG | 1 cut(s) | 1596 |
| BseDI | CCNNGG | 4 cut(s) | 118, 910, 1292, 1595 |
| BseJI | GATNNNNATC | 1 cut(s) | 1037 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 90, 911, 1172, 1293 |
| BseMI | GCAATG | 2 cut(s) | 558, 729 |
| BseMII | CTCAG | 3 cut(s) | 160, 2292, 2985 |
| BseNI | ACTGG | 6 cut(s) | 514, 533, 973, 1982, 2619, 2753 |
| BseRI | GAGGAG | 1 cut(s) | 228 |
| BseSI | GKGCMC | 1 cut(s) | 2141 |
| BseX3I | CGGCCG | 1 cut(s) | 1958 |
| BseXI | GCAGC | 1 cut(s) | 2142 |
| BsgI | GTGCAG | 1 cut(s) | 2977 |
| Bsh1236I | CGCG | 2 cut(s) | 266, 2391 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1961 |
| BshFI | GGCC | 3 cut(s) | 1960, 2380, 2815 |
| BshNI | GGYRCC | 1 cut(s) | 2749 |
| BshTI | ACCGGT | 1 cut(s) | 817 |
| BsiEI | CGRYCG | 1 cut(s) | 1961 |
| BsiHKAI | GWGCWC | 4 cut(s) | 637, 1701, 2085, 2141 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1571, 2830 |
| BsiSI | CCGG | 5 cut(s) | 818, 1054, 1957, 2573, 2739 |
| BslFI | GGGAC | 4 cut(s) | 67, 856, 1432, 2342 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 90, 911, 1172, 1293 |
| BsmAI | GTCTC | 3 cut(s) | 472, 2614, 2658 |
| BsmFI | GGGAC | 4 cut(s) | 67, 856, 1432, 2342 |
| BsmI | GAATGC | 1 cut(s) | 1746 |
| BsnI | GGCC | 3 cut(s) | 1960, 2380, 2815 |
| BsoBI | CYCGRG | 2 cut(s) | 1571, 2830 |
| Bsp119I | TTCGAA | 3 cut(s) | 575, 1179, 1997 |
| Bsp1286I | GDGCHC | 6 cut(s) | 637, 1247, 1572, 1701, 2085, 2141 |
| Bsp13I | TCCGGA | 1 cut(s) | 2572 |
| Bsp1407I | TGTACA | 2 cut(s) | 2726, 3003 |
| Bsp68I | TCGCGA | 2 cut(s) | 266, 2391 |
| BspACI | CCGC | 3 cut(s) | 1774, 1921, 1961 |
| BspANI | GGCC | 3 cut(s) | 1960, 2380, 2815 |
| BspCNI | CTCAG | 3 cut(s) | 159, 2293, 2986 |
| BspEI | TCCGGA | 1 cut(s) | 2572 |
| BspFNI | CGCG | 2 cut(s) | 266, 2391 |
| BspHI | TCATGA | 1 cut(s) | 330 |
| BspLI | GGNNCC | 5 cut(s) | 387, 654, 705, 2174, 2751 |
| BspPI | GGATC | 5 cut(s) | 358, 380, 393, 722, 1863 |
| BspQI | GCTCTTC | 2 cut(s) | 1176, 1422 |
| BspT104I | TTCGAA | 3 cut(s) | 575, 1179, 1997 |
| BspT107I | GGYRCC | 1 cut(s) | 2749 |
| BspTI | CTTAAG | 2 cut(s) | 1759, 2335 |
| BsrDI | GCAATG | 2 cut(s) | 558, 729 |
| BsrFI | RCCGGY | 2 cut(s) | 817, 1956 |
| BsrGI | TGTACA | 2 cut(s) | 2726, 3003 |
| BsrI | ACTGG | 6 cut(s) | 514, 533, 973, 1982, 2619, 2753 |
| BssAI | RCCGGY | 2 cut(s) | 817, 1956 |
| BssECI | CCNNGG | 4 cut(s) | 118, 910, 1292, 1595 |
| BssNAI | GTATAC | 1 cut(s) | 810 |
| BssSI | CACGAG | 1 cut(s) | 2140 |
| BssT1I | CCWWGG | 1 cut(s) | 910 |
| Bst1107I | GTATAC | 1 cut(s) | 810 |
| Bst2BI | CACGAG | 1 cut(s) | 2140 |
| Bst2UI | CCWGG | 1 cut(s) | 1596 |
| Bst4CI | ACNGT | 8 cut(s) | 617, 764, 839, 864, 2124, 2606, 2731, 3068 |
| Bst6I | CTCTTC | 3 cut(s) | 1176, 1422, 2167 |
| BstAFI | CTTAAG | 2 cut(s) | 1759, 2335 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1531 |
| BstAUI | TGTACA | 2 cut(s) | 2726, 3003 |
| BstBAI | YACGTR | 2 cut(s) | 134, 605 |
| BstBI | TTCGAA | 3 cut(s) | 575, 1179, 1997 |
| BstC8I | GCNNGC | 6 cut(s) | 1126, 1188, 1393, 1965, 2436, 2845 |
| BstDEI | CTNAG | 4 cut(s) | 146, 258, 2301, 2994 |
| BstDSI | CCRYGG | 1 cut(s) | 118 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 909 |
| BstFNI | CGCG | 2 cut(s) | 266, 2391 |
| BstHHI | GCGC | 1 cut(s) | 56 |
| BstMAI | GTCTC | 3 cut(s) | 472, 2614, 2658 |
| BstMCI | CGRYCG | 1 cut(s) | 1961 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 756, 1121, 1531 |
| BstNI | CCWGG | 1 cut(s) | 1596 |
| BstNSI | RCATGY | 5 cut(s) | 245, 1395, 1875, 1921, 2438 |
| BstSCI | CCNGG | 2 cut(s) | 1594, 2737 |
| BstSFI | CTRYAG | 2 cut(s) | 376, 2823 |
| BstSLI | GKGCMC | 1 cut(s) | 2141 |
| BstSNI | TACGTA | 1 cut(s) | 134 |
| BstUI | CGCG | 2 cut(s) | 266, 2391 |
| BstV1I | GCAGC | 1 cut(s) | 2142 |
| BstV2I | GAAGAC | 2 cut(s) | 421, 2378 |
| BstX2I | RGATCY | 3 cut(s) | 385, 2304, 2935 |
| BstYI | RGATCY | 3 cut(s) | 385, 2304, 2935 |
| BstZ17I | GTATAC | 1 cut(s) | 810 |
| BstZI | CGGCCG | 1 cut(s) | 1958 |
| BsuRI | GGCC | 3 cut(s) | 1960, 2380, 2815 |
| BtgI | CCRYGG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 7 cut(s) | 507, 564, 844, 2271, 2612, 2760, 2960 |
| BtuMI | TCGCGA | 2 cut(s) | 266, 2391 |
| Cac8I | GCNNGC | 6 cut(s) | 1126, 1188, 1393, 1965, 2436, 2845 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2122 |
| CciI | TCATGA | 1 cut(s) | 330 |
| CfoI | GCGC | 1 cut(s) | 56 |
| Cfr10I | RCCGGY | 2 cut(s) | 817, 1956 |
| Cfr13I | GGNCC | 1 cut(s) | 704 |
| Csp6I | GTAC | 8 cut(s) | 131, 1801, 1893, 1900, 2461, 2727, 2758, 3004 |
| CspAI | ACCGGT | 1 cut(s) | 817 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1797, 1832, 2058, 2093 |
| CviQI | GTAC | 8 cut(s) | 131, 1801, 1893, 1900, 2461, 2727, 2758, 3004 |
| DdeI | CTNAG | 4 cut(s) | 146, 258, 2301, 2994 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3059 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3059 |
| EaeI | YGGCCR | 1 cut(s) | 1958 |
| EagI | CGGCCG | 1 cut(s) | 1958 |
| Eam1104I | CTCTTC | 3 cut(s) | 1176, 1422, 2167 |
| EarI | CTCTTC | 3 cut(s) | 1176, 1422, 2167 |
| Ecl136II | GAGCTC | 3 cut(s) | 635, 1699, 2083 |
| EclXI | CGGCCG | 1 cut(s) | 1958 |
| Eco105I | TACGTA | 1 cut(s) | 134 |
| Eco130I | CCWWGG | 1 cut(s) | 910 |
| Eco147I | AGGCCT | 1 cut(s) | 2815 |
| Eco24I | GRGCYC | 5 cut(s) | 637, 1247, 1572, 1701, 2085 |
| Eco32I | GATATC | 2 cut(s) | 895, 2446 |
| Eco47I | GGWCC | 1 cut(s) | 704 |
| Eco52I | CGGCCG | 1 cut(s) | 1958 |
| Eco53kI | GAGCTC | 3 cut(s) | 635, 1699, 2083 |
| Eco57I | CTGAAG | 1 cut(s) | 2504 |
| Eco72I | CACGTG | 1 cut(s) | 605 |
| Eco88I | CYCGRG | 2 cut(s) | 1571, 2830 |
| EcoICRI | GAGCTC | 3 cut(s) | 635, 1699, 2083 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 909 |
| EcoO109I | RGGNCCY | 1 cut(s) | 704 |
| EcoRII | CCWGG | 1 cut(s) | 1594 |
| EcoRV | GATATC | 2 cut(s) | 895, 2446 |
| EcoT14I | CCWWGG | 1 cut(s) | 910 |
| EcoT22I | ATGCAT | 2 cut(s) | 1527, 2436 |
| EcoT38I | GRGCYC | 5 cut(s) | 637, 1247, 1572, 1701, 2085 |
| ErhI | CCWWGG | 1 cut(s) | 910 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 836, 868, 1419, 1451 |
| FaqI | GGGAC | 4 cut(s) | 67, 856, 1432, 2342 |
| FauNDI | CATATG | 2 cut(s) | 639, 1117 |
| FblI | GTMKAC | 2 cut(s) | 809, 3063 |
| Fnu4HI | GCNGC | 2 cut(s) | 1961, 2156 |
| FriOI | GRGCYC | 5 cut(s) | 637, 1247, 1572, 1701, 2085 |
| Fsp4HI | GCNGC | 2 cut(s) | 1961, 2156 |
| FspBI | CTAG | 9 cut(s) | 282, 735, 911, 986, 1535, 1623, 1847, 2219, 2514 |
| FspI | TGCGCA | 1 cut(s) | 55 |
| GlaI | GCGC | 1 cut(s) | 55 |
| GluI | GCNGC | 2 cut(s) | 1961, 2156 |
| GsuI | CTGGAG | 2 cut(s) | 2099, 2636 |
| HaeIII | GGCC | 3 cut(s) | 1960, 2380, 2815 |
| HapII | CCGG | 5 cut(s) | 818, 1054, 1957, 2573, 2739 |
| HhaI | GCGC | 1 cut(s) | 56 |
| Hin6I | GCGC | 1 cut(s) | 54 |
| HinP1I | GCGC | 1 cut(s) | 54 |
| HincII | GTYRAC | 3 cut(s) | 35, 1869, 3064 |
| HindII | GTYRAC | 3 cut(s) | 35, 1869, 3064 |
| HindIII | AAGCTT | 2 cut(s) | 112, 1122 |
| HpaII | CCGG | 5 cut(s) | 818, 1054, 1957, 2573, 2739 |
| HphI | GGTGA | 3 cut(s) | 899, 1793, 2896 |
| Hpy188I | TCNGA | 7 cut(s) | 394, 676, 829, 1032, 1696, 2099, 2523 |
| Hpy99I | CGWCG | 1 cut(s) | 2458 |
| HpyCH4III | ACNGT | 8 cut(s) | 617, 764, 839, 864, 2124, 2606, 2731, 3068 |
| HpyCH4IV | ACGT | 5 cut(s) | 133, 604, 1098, 1473, 1603 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 756, 1121, 1531 |
| HpyF3I | CTNAG | 4 cut(s) | 146, 258, 2301, 2994 |
| HpySE526I | ACGT | 5 cut(s) | 133, 604, 1098, 1473, 1603 |
| HspAI | GCGC | 1 cut(s) | 54 |
| Kpn2I | TCCGGA | 1 cut(s) | 2572 |
| LguI | GCTCTTC | 2 cut(s) | 1176, 1422 |
| LmnI | GCTCC | 5 cut(s) | 44, 2011, 2080, 2088, 2152 |
| Lsp1109I | GCAGC | 1 cut(s) | 2142 |
| MaeI | CTAG | 9 cut(s) | 282, 735, 911, 986, 1535, 1623, 1847, 2219, 2514 |
| MaeII | ACGT | 5 cut(s) | 133, 604, 1098, 1473, 1603 |
| MaeIII | GTNAC | 9 cut(s) | 512, 846, 1343, 1781, 2184, 2610, 3028, 3050, 3068 |
| MfeI | CAATTG | 1 cut(s) | 1541 |
| MflI | RGATCY | 3 cut(s) | 385, 2304, 2935 |
| MhlI | GDGCHC | 6 cut(s) | 637, 1247, 1572, 1701, 2085, 2141 |
| MlyI | GAGTC | 3 cut(s) | 40, 1297, 2618 |
| MmeI | TCCRAC | 2 cut(s) | 1010, 3060 |
| Mph1103I | ATGCAT | 2 cut(s) | 1527, 2436 |
| MroI | TCCGGA | 1 cut(s) | 2572 |
| MroXI | GAANNNNTTC | 4 cut(s) | 428, 863, 1557, 2052 |
| MslI | CAYNNNNRTG | 3 cut(s) | 304, 675, 2456 |
| MspCI | CTTAAG | 2 cut(s) | 1759, 2335 |
| MspI | CCGG | 5 cut(s) | 818, 1054, 1957, 2573, 2739 |
| MspR9I | CCNGG | 2 cut(s) | 1596, 2739 |
| MunI | CAATTG | 1 cut(s) | 1541 |
| Mva1269I | GAATGC | 1 cut(s) | 1746 |
| MvaI | CCWGG | 1 cut(s) | 1596 |
| MvnI | CGCG | 2 cut(s) | 266, 2391 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 756, 1121, 1531 |
| NciI | CCSGG | 1 cut(s) | 2739 |
| NdeI | CATATG | 2 cut(s) | 639, 1117 |
| NlaIV | GGNNCC | 5 cut(s) | 387, 654, 705, 2174, 2751 |
| NmuCI | GTSAC | 4 cut(s) | 1781, 2610, 3028, 3050 |
| NruI | TCGCGA | 2 cut(s) | 266, 2391 |
| NsbI | TGCGCA | 1 cut(s) | 55 |
| NsiI | ATGCAT | 2 cut(s) | 1527, 2436 |
| NspI | RCATGY | 5 cut(s) | 245, 1395, 1875, 1921, 2438 |
| NspV | TTCGAA | 3 cut(s) | 575, 1179, 1997 |
| PaeI | GCATGC | 2 cut(s) | 1395, 2438 |
| PaeR7I | CTCGAG | 1 cut(s) | 2830 |
| PagI | TCATGA | 1 cut(s) | 330 |
| PceI | AGGCCT | 1 cut(s) | 2815 |
| PciI | ACATGT | 1 cut(s) | 1871 |
| PciSI | GCTCTTC | 2 cut(s) | 1176, 1422 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3069 |
| PctI | GAATGC | 1 cut(s) | 1746 |
| PdmI | GAANNNNTTC | 4 cut(s) | 428, 863, 1557, 2052 |
| PinAI | ACCGGT | 1 cut(s) | 817 |
| PkrI | GCNGC | 2 cut(s) | 1962, 2157 |
| PleI | GAGTC | 3 cut(s) | 39, 1297, 2617 |
| PmaCI | CACGTG | 1 cut(s) | 605 |
| PmlI | CACGTG | 1 cut(s) | 605 |
| PpsI | GAGTC | 3 cut(s) | 39, 1297, 2617 |
| Ppu21I | YACGTR | 2 cut(s) | 134, 605 |
| PpuMI | RGGWCCY | 1 cut(s) | 704 |
| PscI | ACATGT | 1 cut(s) | 1871 |
| PsiI | TTATAA | 2 cut(s) | 467, 3083 |
| Psp124BI | GAGCTC | 3 cut(s) | 637, 1701, 2085 |
| Psp5II | RGGWCCY | 1 cut(s) | 704 |
| Psp6I | CCWGG | 1 cut(s) | 1594 |
| PspCI | CACGTG | 1 cut(s) | 605 |
| PspGI | CCWGG | 1 cut(s) | 1594 |
| PspN4I | GGNNCC | 5 cut(s) | 387, 654, 705, 2174, 2751 |
| PspPI | GGNCC | 1 cut(s) | 704 |
| PspPPI | RGGWCCY | 1 cut(s) | 704 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2122 |
| PsuI | RGATCY | 3 cut(s) | 385, 2304, 2935 |
| RruI | TCGCGA | 2 cut(s) | 266, 2391 |
| RsaI | GTAC | 8 cut(s) | 132, 1802, 1894, 1901, 2462, 2728, 2759, 3005 |
| RsaNI | GTAC | 8 cut(s) | 131, 1801, 1893, 1900, 2461, 2727, 2758, 3004 |
| RseI | CAYNNNNRTG | 3 cut(s) | 304, 675, 2456 |
| SacI | GAGCTC | 3 cut(s) | 637, 1701, 2085 |
| SalI | GTCGAC | 1 cut(s) | 3062 |
| SapI | GCTCTTC | 2 cut(s) | 1176, 1422 |
| SatI | GCNGC | 2 cut(s) | 1961, 2156 |
| Sau96I | GGNCC | 1 cut(s) | 704 |
| SchI | GAGTC | 3 cut(s) | 40, 1297, 2618 |
| ScrFI | CCNGG | 2 cut(s) | 1596, 2739 |
| SduI | GDGCHC | 6 cut(s) | 637, 1247, 1572, 1701, 2085, 2141 |
| SfcI | CTRYAG | 2 cut(s) | 376, 2823 |
| Sfr274I | CTCGAG | 1 cut(s) | 2830 |
| SfuI | TTCGAA | 3 cut(s) | 575, 1179, 1997 |
| SinI | GGWCC | 1 cut(s) | 704 |
| SlaI | CTCGAG | 1 cut(s) | 2830 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 304, 675, 2456 |
| SmlI | CTYRAG | 7 cut(s) | 1702, 1759, 2068, 2327, 2335, 2791, 2830 |
| SmoI | CTYRAG | 7 cut(s) | 1702, 1759, 2068, 2327, 2335, 2791, 2830 |
| SnaBI | TACGTA | 1 cut(s) | 134 |
| SphI | GCATGC | 2 cut(s) | 1395, 2438 |
| SseBI | AGGCCT | 1 cut(s) | 2815 |
| SsiI | CCGC | 3 cut(s) | 1774, 1921, 1961 |
| SspI | AATATT | 3 cut(s) | 1134, 1321, 2867 |
| SspMI | CTAG | 9 cut(s) | 282, 735, 911, 986, 1535, 1623, 1847, 2219, 2514 |
| SstI | GAGCTC | 3 cut(s) | 637, 1701, 2085 |
| StuI | AGGCCT | 1 cut(s) | 2815 |
| StyD4I | CCNGG | 2 cut(s) | 1594, 2737 |
| StyI | CCWWGG | 1 cut(s) | 910 |
| TaaI | ACNGT | 8 cut(s) | 617, 764, 839, 864, 2124, 2606, 2731, 3068 |
| TaiI | ACGT | 5 cut(s) | 136, 607, 1101, 1476, 1606 |
| TatI | WGTACW | 5 cut(s) | 1800, 2460, 2726, 2757, 3003 |
| TauI | GCSGC | 1 cut(s) | 1963 |
| TscAI | CASTG | 7 cut(s) | 514, 571, 844, 2278, 2619, 2760, 2960 |
| TseFI | GTSAC | 4 cut(s) | 1781, 2610, 3028, 3050 |
| TseI | GCWGC | 1 cut(s) | 2155 |
| Tsp45I | GTSAC | 4 cut(s) | 1781, 2610, 3028, 3050 |
| TspGWI | ACGGA | 4 cut(s) | 107, 1854, 1910, 2553 |
| TspRI | CASTG | 7 cut(s) | 514, 571, 844, 2278, 2619, 2760, 2960 |
| Vha464I | CTTAAG | 2 cut(s) | 1759, 2335 |
| VneI | GTGCAC | 1 cut(s) | 2137 |
| VpaK11BI | GGWCC | 1 cut(s) | 704 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 909 |
| XapI | RAATTY | 8 cut(s) | 347, 415, 696, 1102, 1160, 1754, 2487, 2800 |
| XceI | RCATGY | 5 cut(s) | 245, 1395, 1875, 1921, 2438 |
| XhoI | CTCGAG | 1 cut(s) | 2830 |
| XmaJI | CCTAGG | 1 cut(s) | 910 |
| XmiI | GTMKAC | 2 cut(s) | 809, 3063 |
| XmnI | GAANNNNTTC | 4 cut(s) | 428, 863, 1557, 2052 |
| XspI | CTAG | 9 cut(s) | 282, 735, 911, 986, 1535, 1623, 1847, 2219, 2514 |
| Zsp2I | ATGCAT | 2 cut(s) | 1527, 2436 |