AT3G44400

Disease resistance protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
16044662 .. 16049803
5142 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G44400.1

Sequence Viewer

Length: 3024 bp
ATGGATTCTTCTTTTTTCCTTGTCGTAGTCGCAGCTGCTATAGGCTTCTTCATACTTTTTCGAAAATTCAGATTCCAAGAAAGTAATTCTTCTTCTTTATCTCTTCCATCTCCTGCAACTTCTGTGTCTCGAAACTGGAAACACGATGTCTTCCCGAGCTTCCATGGGGCAGATGTCCGAAGAACCTTTCTTAGTCACATCAAGGAATCGTTCAGAAGAAAGGGAATTGACACATTCATTGATAATAATATAGAGAGGAGTAAGTCGATCGGTCCTGAGCTCAAAGAAGCTATCAAAGGATCAAAGATCGCAATCGTTTTGCTCTCAAGGAAATATGCTTCTTCGTCATGGTGTCTTGATGAGTTGGCCGAGATCATGAAATGCAGGGAAATGGTGGGTCAGATTGTCATGACCATTTTCTATGAAGTGGAGCCAACTGACATAAAGAAACAGACTGGTGAATTCGGAAAAGCCTTCACAAAAACATGTAGAGGTAAAACAAAAGAGCATATTGAGAGATGGAGAAAAGCTTTGGAGGATGTGGCAACAATCGCCGGATATCATTCTCACAAATGGTGCGATGAAGCGGAGATGATTGAAAAGATATCCACTGATGTTTCAAAAGATTTCGATGATTTTGTTGGGATGGCAGCTCATATGGAAAGGACGGAACAATTGTTACGCCTAGATTTGGATGAAGTAAGGATGATTGGGATTTTGGGTCCGCCTGGGATTGGTAAGACGACCATCGCTACATGTATGTTTGATCGATTCTCCAGGAGATTTCCATTTGCTGCAATCATGACGGATATCAGAGAATGCTATCCAAGACTTTGTTTGAATGAGCGCAATGCACAATTGAAACTACAAGAACAAATGTTGTCTCAGATTTTCAATCAGAAAGATACCATGATTTCTCATTTAGGAGTGGCACCAGAACGTTTGAAAGACAAGAAAGTGTTTCTCGTTCTTGATGAAGTGGGTCACTTAGGACAACTAGATGCCTTGGCGAAAGAAACTCGATGGTTTGGTCCTGGAAGTCGGATTATTATCACAACAGAAGATCTAGGAGTTTTGAAGGCCCATGGGATCAATCATGTTTACAAAGTGGGATATCCATCAAATGACGAGGCTTTTCAAATCTTCTGTATGAATGCCTTTGGTCAGAAACAACCATGTGAAGGTTTCTGTGACCTTGCTTGGGAGGTTAAGGCATTAGCTGGTGAACTCCCTTTGGGATTGAAGGTTCTAGGCTCCGCTTTGCGGGGGATGTCCAAGCCAGAGTGGGAAAGAACACTACCAAGGTTAAGAACTAGCCTCGACGGAAAAATCGGGAACATTATACAGTTCAGTTACGATGCCTTATGTGACGAAGATAAATATCTATTTCTTTATATAGCCTGCCTTTTTAACTACGAATCAACAACCAAAGTGAAAGAGCTTCTTGGAAAGTTCTTGGATGTGAAACAAGGTCTTCACGTATTAGCTCAGAAATCTCTCATATCCTTTTATGGAGAAACAATACGGATGCATACTCTGCTAGAACAATTTGGAAGAGAAACTTCCTGTAAGCAATTCGTTCATCATGGCTATAGGAAACATCAACTTTTGGTAGGTGAAAGGGATATATGTGAAGTGCTCGACGATGATACAAGAGATAATAGACGTTTTATAGGGATAAATTTGGATTTACGTAAGAATGAGAAAGAATTGAAAATAAGTGAGAAAACACTTGAAAGAATGCATGATTTTCAATTCGTTAGAATCAATGACGTATTTACTCATAAGGAGAGACAGAAACTGCTTCACTTCAAGATTATACATCAACCTGAGAGAGTGCAGTTAGCACTAGAAGATCTGATTTATCACTCTCCACGAATTAGATCATTGAAATGGTTTGGTTACCAGAATATATGTTTGCCTTCTACTTTTAATCCAGAGTTTCTCGTCGAACTAGATATGAGTTCCAGCAAGCTTCGGAAGCTATGGGAAGGAACTAAACAACTTAGAAATCTCAAGTGGATGGATTTGAGTGATTCTGAAGACTTGAAAGAGCTTCCCAATCTTTCAACTGCAACTAATCTCGAAGAATTAAAGCTTAGACGTTGCTCAAGTTTAGTGGAGCTCCCCTCCTCTATTGAAAAACTCACCAGTCTCCAGATATTAGATCTCCACAGTTGCTCAAGTCTTGTGGAGCTTCCCTCTTTTGGAAACGCAACTAAACTTGAGAAACTAGATCTTGAAAATTGTTCGAGTCTTGTGAAGCTCCCACCATCTATCAATGCCAATAATCTCCAGGAATTGTCTCTAAGAAATTGTTCACGTGTTGTGGAGCTCCCTGCTATCGAGAATGCGACTAATCTCCGTGAATTGAAGCTCCAAAATTGCTCAAGTCTAATAGAGCTCCCTCTTTCATGGGTCAAGAGAATGTCTCGTTTACGTGTTCTGACACTCAACAACTGCAATAATCTGGTATCACTCCCCCAACTTCCAGACTCCCTTGATTACATATATGCAGATAATTGTAAGTCCCTCGAGAGACTGGACTGTTGCTTTAACAATCCAGAGATTAGTCTATATTTTCCCAATTGCTTCAAACTGAATCAAGAAGCCAGAGATCTCATCATGCACACATCGACTTCTAGATTTGCGATGTTACCCGGTACACAAGTGCCTGCCTGCTTCATTCACCGAGCTACTTCTGGGGATTACTTGAAAATCAAGTTGAAGGAGTCGCCTTTTCCTACAACCTTGAGATTTAAGGCTTGTATCATGCTTGTTAAGGTTAATGAAGAAATGAGTTATGATCAGAGATCGATGAGCGTTGACATTGTCATCAGTGTACACCAAGCTATCAAAGTTCAGTGTACACCAAGCTATCATCATATATATCCAGTTTTAACAGAGCATATATACACATTTGAACTTGAAGTAGAGGAGGTGACTTCCACGGAGCTTGTCTTTGAGTTCATATCATTCAGAAGCAATTGGAAGATAGGAGAATGCGGGATACTCCAAAGATAG

Protein Analysis

1007

Amino Acids

115.78

Weight (kDa)

7.49

Isoelectric Point (pI)

48.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 47 - 210 1.1e-60 TIR domain
TIR_2 PF13676 50 - 144 9.1e-12 TIR domain
NB-ARC PF00931 224 - 390 2.4e-11 NB-ARC domain
WHD_ROQ1 PF23282 458 - 521 7.3e-11 Disease resistance protein Roq1-like, winged-helix domain
LRR_3 PF07725 648 - 667 8.2e-07 Leucine Rich Repeat
LRR_14 PF23598 654 - 818 7.2e-07 Leucine-rich repeat region
C-JID PF20160 886 - 977 3.5e-11 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 931
AciI CCGC 5 cut(s) 587, 725, 1257, 1264, 3006
AclI AACGTT 1 cut(s) 940
AclWI GGATC 2 cut(s) 307, 1097
AcoI YGGCCR 1 cut(s) 366
AcsI RAATTY 3 cut(s) 65, 461, 1681
AcuI CTGAAG 1 cut(s) 2061
AcvI CACGTG 1 cut(s) 2324
AfaI GTAC 3 cut(s) 2665, 2844, 2869
AfiI CCNNNNNNNGG 6 cut(s) 691, 734, 1181, 1201, 1263, 2207
AflIII ACRYGT 4 cut(s) 485, 755, 2323, 2440
AjnI CCWGG 4 cut(s) 727, 776, 1033, 2295
AloI GAACNNNNNNTCC 2 cut(s) 1230, 1262
Alw21I GWGCWC 5 cut(s) 282, 1641, 2127, 2337, 2406
Alw26I GTCTC 7 cut(s) 132, 888, 1786, 2159, 2310, 2436, 2533
AlwI GGATC 2 cut(s) 307, 1097
AlwNI CAGNNNCTG 1 cut(s) 1801
Ama87I CYCGRG 2 cut(s) 154, 2534
AoxI GGCC 2 cut(s) 366, 1080
ApeKI GCWGC 4 cut(s) 32, 35, 650, 794
ApoI RAATTY 3 cut(s) 65, 461, 1681
Asp700I GAANNNNTTC 1 cut(s) 2317
AspLEI GCGC 1 cut(s) 849
AspS9I GGNCC 4 cut(s) 272, 722, 1031, 1081
AsuC2I CCSGG 1 cut(s) 2661
AsuHPI GGTGA 6 cut(s) 470, 1235, 1628, 2140, 2681, 2953
AsuII TTCGAA 1 cut(s) 61
AvaI CYCGRG 2 cut(s) 154, 2534
AvaII GGWCC 3 cut(s) 272, 722, 1031
BaeI ACNNNNGTAYC 2 cut(s) 2655, 2688
BanI GGYRCC 1 cut(s) 931
BanII GRGCYC 4 cut(s) 282, 2127, 2337, 2406
BarI GAAGNNNNNNTAC 2 cut(s) 76, 108
BbrPI CACGTG 1 cut(s) 2324
BbsI GAAGAC 3 cut(s) 142, 1466, 2049
Bbv12I GWGCWC 5 cut(s) 282, 1641, 2127, 2337, 2406
BbvI GCAGC 4 cut(s) 22, 44, 662, 781
BccI CCATC 8 cut(s) 115, 513, 640, 755, 1017, 1126, 2017, 2281
BciT130I CCWGG 4 cut(s) 729, 778, 1035, 2297
BciVI GTATCC 1 cut(s) 3003
BclI TGATCA 1 cut(s) 2806
BcnI CCSGG 1 cut(s) 2661
BcoDI GTCTC 7 cut(s) 132, 888, 1786, 2159, 2310, 2436, 2533
BfmI CTRYAG 2 cut(s) 39, 1591
BfuI GTATCC 1 cut(s) 3003
BglII AGATCT 5 cut(s) 1063, 1855, 2167, 2236, 2617
BisI GCNGC 4 cut(s) 33, 36, 651, 795
BlsI GCNGC 4 cut(s) 34, 37, 652, 796
Bme1390I CCNGG 5 cut(s) 729, 778, 1035, 2297, 2661
Bme18I GGWCC 3 cut(s) 272, 722, 1031
BmeT110I CYCGRG 2 cut(s) 154, 2534
BmgT120I GGNCC 4 cut(s) 272, 722, 1031, 1081
BmiI GGNNCC 4 cut(s) 432, 723, 933, 1255
BmrFI CCNGG 5 cut(s) 729, 778, 1035, 2297, 2661
BmsI GCATC 3 cut(s) 991, 1348, 1518
BpiI GAAGAC 3 cut(s) 142, 1466, 2049
BplI GAGNNNNNCTC 6 cut(s) 2114, 2146, 2186, 2218, 2416, 2448
BpmI CTGGAG 3 cut(s) 760, 2141, 2279
Bpu10I CCTNAGC 1 cut(s) 276
Bpu14I TTCGAA 1 cut(s) 61
BpuEI CTTGAG 7 cut(s) 310, 2000, 2095, 2167, 2246, 2374, 2773
BpuMI CCSGG 1 cut(s) 2661
Bsa29I ATCGAT 2 cut(s) 769, 2816
BsaAI YACGTR 4 cut(s) 1480, 1694, 2324, 2441
BsaBI GATNNNNATC 4 cut(s) 311, 1049, 1117, 1380
BsaJI CCNNGG 6 cut(s) 163, 728, 1005, 1084, 1301, 2949
Bsc4I CCNNNNNNNGG 6 cut(s) 691, 734, 1181, 1201, 1263, 2207
Bse1I ACTGG 5 cut(s) 140, 460, 2151, 2547, 2894
Bse3DI GCAATG 1 cut(s) 856
Bse8I GATNNNNATC 4 cut(s) 311, 1049, 1117, 1380
BseBI CCWGG 4 cut(s) 729, 778, 1035, 2297
BseCI ATCGAT 2 cut(s) 769, 2816
BseDI CCNNGG 6 cut(s) 163, 728, 1005, 1084, 1301, 2949
BseGI GGATG 8 cut(s) 544, 651, 700, 711, 1275, 1465, 1533, 2028
BseJI GATNNNNATC 4 cut(s) 311, 1049, 1117, 1380
BseLI CCNNNNNNNGG 6 cut(s) 691, 734, 1181, 1201, 1263, 2207
BseMI GCAATG 1 cut(s) 856
BseMII CTCAG 4 cut(s) 267, 899, 1502, 1821
BseNI ACTGG 5 cut(s) 140, 460, 2151, 2547, 2894
BseRI GAGGAG 3 cut(s) 271, 2122, 2951
BseXI GCAGC 4 cut(s) 22, 44, 662, 781
BsgI GTGCAG 1 cut(s) 1859
Bsh1285I CGRYCG 1 cut(s) 270
BshFI GGCC 2 cut(s) 368, 1082
BshNI GGYRCC 1 cut(s) 931
BshVI ATCGAT 2 cut(s) 769, 2816
BsiEI CGRYCG 1 cut(s) 270
BsiHKAI GWGCWC 5 cut(s) 282, 1641, 2127, 2337, 2406
BsiHKCI CYCGRG 2 cut(s) 154, 2534
BsiSI CCGG 2 cut(s) 555, 2661
BslFI GGGAC 1 cut(s) 2515
BslI CCNNNNNNNGG 6 cut(s) 691, 734, 1181, 1201, 1263, 2207
BsmAI GTCTC 7 cut(s) 132, 888, 1786, 2159, 2310, 2436, 2533
BsmFI GGGAC 1 cut(s) 2515
BsmI GAATGC 5 cut(s) 824, 1159, 1746, 2356, 3008
BsnI GGCC 2 cut(s) 368, 1082
BsoBI CYCGRG 2 cut(s) 154, 2534
Bsp119I TTCGAA 1 cut(s) 61
Bsp1286I GDGCHC 5 cut(s) 282, 1641, 2127, 2337, 2406
Bsp1407I TGTACA 2 cut(s) 2842, 2867
Bsp19I CCATGG 2 cut(s) 163, 1084
BspACI CCGC 5 cut(s) 587, 725, 1257, 1264, 3006
BspANI GGCC 2 cut(s) 368, 1082
BspCNI CTCAG 4 cut(s) 268, 898, 1501, 1822
BspDI ATCGAT 2 cut(s) 769, 2816
BspHI TCATGA 3 cut(s) 375, 408, 801
BspLI GGNNCC 4 cut(s) 432, 723, 933, 1255
BspPI GGATC 2 cut(s) 307, 1097
BspT104I TTCGAA 1 cut(s) 61
BspT107I GGYRCC 1 cut(s) 931
BsrDI GCAATG 1 cut(s) 856
BsrGI TGTACA 2 cut(s) 2842, 2867
BsrI ACTGG 5 cut(s) 140, 460, 2151, 2547, 2894
BssECI CCNNGG 6 cut(s) 163, 728, 1005, 1084, 1301, 2949
BssT1I CCWWGG 4 cut(s) 163, 1005, 1084, 1301
Bst2UI CCWGG 4 cut(s) 729, 778, 1035, 2297
Bst4CI ACNGT 3 cut(s) 1347, 2177, 2549
Bst6I CTCTTC 2 cut(s) 108, 1549
BstAPI GCANNNNNTGC 1 cut(s) 1537
BstAUI TGTACA 2 cut(s) 2842, 2867
BstBAI YACGTR 4 cut(s) 1480, 1694, 2324, 2441
BstBI TTCGAA 1 cut(s) 61
BstC8I GCNNGC 4 cut(s) 1402, 1973, 2676, 2680
BstDEI CTNAG 9 cut(s) 191, 276, 885, 988, 1488, 1830, 2006, 2099, 2309
BstDSI CCRYGG 3 cut(s) 163, 1084, 2949
BstEII GGTNACC 1 cut(s) 1901
BstF5I GGATG 8 cut(s) 544, 651, 700, 711, 1275, 1465, 1533, 2028
BstHHI GCGC 1 cut(s) 849
BstMAI GTCTC 7 cut(s) 132, 888, 1786, 2159, 2310, 2436, 2533
BstMCI CGRYCG 1 cut(s) 270
BstMWI GCNNNNNNNGC 3 cut(s) 551, 1537, 1981
BstNI CCWGG 4 cut(s) 729, 778, 1035, 2297
BstNSI RCATGY 2 cut(s) 489, 759
BstPI GGTNACC 1 cut(s) 1901
BstSCI CCNGG 5 cut(s) 727, 776, 1033, 2295, 2659
BstSFI CTRYAG 2 cut(s) 39, 1591
BstSNI TACGTA 1 cut(s) 1694
BstV1I GCAGC 4 cut(s) 22, 44, 662, 781
BstV2I GAAGAC 3 cut(s) 142, 1466, 2049
BstX2I RGATCY 5 cut(s) 1063, 1855, 2167, 2236, 2617
BstYI RGATCY 5 cut(s) 1063, 1855, 2167, 2236, 2617
Bsu15I ATCGAT 2 cut(s) 769, 2816
BsuI GTATCC 1 cut(s) 3003
BsuRI GGCC 2 cut(s) 368, 1082
BsuTUI ATCGAT 2 cut(s) 769, 2816
BtgI CCRYGG 3 cut(s) 163, 1084, 2949
BtgZI GCGATG 3 cut(s) 594, 733, 2666
BtsCI GGATG 8 cut(s) 544, 651, 700, 711, 1275, 1465, 1533, 2028
BtsIMutI CAGTG 3 cut(s) 609, 2845, 2870
Cac8I GCNNGC 4 cut(s) 1402, 1973, 2676, 2680
CaiI CAGNNNCTG 1 cut(s) 1801
CciI TCATGA 3 cut(s) 375, 408, 801
CfoI GCGC 1 cut(s) 849
Cfr13I GGNCC 4 cut(s) 272, 722, 1031, 1081
ClaI ATCGAT 2 cut(s) 769, 2816
Csp6I GTAC 3 cut(s) 2664, 2843, 2868
CspCI CAANNNNNGTGG 6 cut(s) 2100, 2135, 2172, 2207, 2938, 2973
CviQI GTAC 3 cut(s) 2664, 2843, 2868
DdeI CTNAG 9 cut(s) 191, 276, 885, 988, 1488, 1830, 2006, 2099, 2309
EaeI YGGCCR 1 cut(s) 366
Eam1104I CTCTTC 2 cut(s) 108, 1549
EarI CTCTTC 2 cut(s) 108, 1549
EciI GGCGGA 1 cut(s) 714
Ecl136II GAGCTC 4 cut(s) 280, 2125, 2335, 2404
Eco105I TACGTA 1 cut(s) 1694
Eco130I CCWWGG 4 cut(s) 163, 1005, 1084, 1301
Eco24I GRGCYC 4 cut(s) 282, 2127, 2337, 2406
Eco32I GATATC 4 cut(s) 560, 606, 811, 1115
Eco47I GGWCC 3 cut(s) 272, 722, 1031
Eco53kI GAGCTC 4 cut(s) 280, 2125, 2335, 2404
Eco57I CTGAAG 1 cut(s) 2061
Eco72I CACGTG 1 cut(s) 2324
Eco88I CYCGRG 2 cut(s) 154, 2534
Eco91I GGTNACC 1 cut(s) 1901
EcoICRI GAGCTC 4 cut(s) 280, 2125, 2335, 2404
EcoO65I GGTNACC 1 cut(s) 1901
EcoRI GAATTC 1 cut(s) 461
EcoRII CCWGG 4 cut(s) 727, 776, 1033, 2295
EcoRV GATATC 4 cut(s) 560, 606, 811, 1115
EcoT14I CCWWGG 4 cut(s) 163, 1005, 1084, 1301
EcoT22I ATGCAT 2 cut(s) 1533, 1746
EcoT38I GRGCYC 4 cut(s) 282, 2127, 2337, 2406
ErhI CCWWGG 4 cut(s) 163, 1005, 1084, 1301
FalI AAGNNNNNCTT 6 cut(s) 73, 105, 1428, 1460, 1546, 1578
FaqI GGGAC 1 cut(s) 2515
FauI CCCGC 2 cut(s) 1257, 2999
FauNDI CATATG 1 cut(s) 657
FbaI TGATCA 1 cut(s) 2806
Fnu4HI GCNGC 4 cut(s) 33, 36, 651, 795
FokI GGATG 8 cut(s) 551, 658, 707, 718, 1282, 1472, 1540, 2035
FriOI GRGCYC 4 cut(s) 282, 2127, 2337, 2406
Fsp4HI GCNGC 4 cut(s) 33, 36, 651, 795
GlaI GCGC 1 cut(s) 848
GluI GCNGC 4 cut(s) 33, 36, 651, 795
GsuI CTGGAG 3 cut(s) 760, 2141, 2279
HaeIII GGCC 2 cut(s) 368, 1082
HapII CCGG 2 cut(s) 555, 2661
HhaI GCGC 1 cut(s) 849
Hin6I GCGC 1 cut(s) 847
HinP1I GCGC 1 cut(s) 847
HincII GTYRAC 1 cut(s) 2827
HindII GTYRAC 1 cut(s) 2827
HindIII AAGCTT 3 cut(s) 528, 1973, 2096
HpaII CCGG 2 cut(s) 555, 2661
HphI GGTGA 6 cut(s) 470, 1235, 1628, 2140, 2681, 2953
Hpy99I CGWCG 3 cut(s) 1325, 1646, 1952
HpyAV CCTTC 7 cut(s) 484, 1072, 1175, 1237, 1932, 1985, 2722
HpyCH4III ACNGT 3 cut(s) 1347, 2177, 2549
HpyCH4IV ACGT 8 cut(s) 940, 1479, 1666, 1693, 1773, 2104, 2323, 2440
HpyF10VI GCNNNNNNNGC 3 cut(s) 551, 1537, 1981
HpyF3I CTNAG 9 cut(s) 191, 276, 885, 988, 1488, 1830, 2006, 2099, 2309
HpySE526I ACGT 8 cut(s) 940, 1479, 1666, 1693, 1773, 2104, 2323, 2440
HspAI GCGC 1 cut(s) 847
Ksp22I TGATCA 1 cut(s) 2806
Lsp1109I GCAGC 4 cut(s) 22, 44, 662, 781
LweI GCATC 3 cut(s) 991, 1348, 1518
MaeII ACGT 8 cut(s) 940, 1479, 1666, 1693, 1773, 2104, 2323, 2440
MaeIII GTNAC 9 cut(s) 194, 678, 983, 1190, 1352, 1367, 1901, 2655, 2941
MfeI CAATTG 4 cut(s) 674, 857, 2587, 2986
MflI RGATCY 5 cut(s) 1063, 1855, 2167, 2236, 2617
MhlI GDGCHC 5 cut(s) 282, 1641, 2127, 2337, 2406
MlyI GAGTC 3 cut(s) 2263, 2489, 2741
MmeI TCCRAC 1 cut(s) 1022
Mph1103I ATGCAT 2 cut(s) 1533, 1746
MroXI GAANNNNTTC 1 cut(s) 2317
MslI CAYNNNNRTG 1 cut(s) 1891
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 2 cut(s) 555, 2661
MspR9I CCNGG 5 cut(s) 729, 778, 1035, 2297, 2661
MunI CAATTG 4 cut(s) 674, 857, 2587, 2986
Mva1269I GAATGC 5 cut(s) 824, 1159, 1746, 2356, 3008
MvaI CCWGG 4 cut(s) 729, 778, 1035, 2297
MwoI GCNNNNNNNGC 3 cut(s) 551, 1537, 1981
NciI CCSGG 1 cut(s) 2661
NcoI CCATGG 2 cut(s) 163, 1084
NdeI CATATG 1 cut(s) 657
NlaIV GGNNCC 4 cut(s) 432, 723, 933, 1255
NmeAIII GCCGAG 1 cut(s) 394
NmuCI GTSAC 5 cut(s) 194, 983, 1190, 1367, 2941
NsiI ATGCAT 2 cut(s) 1533, 1746
NspI RCATGY 2 cut(s) 489, 759
NspV TTCGAA 1 cut(s) 61
PaeR7I CTCGAG 1 cut(s) 2534
PagI TCATGA 3 cut(s) 375, 408, 801
PciI ACATGT 2 cut(s) 485, 755
PctI GAATGC 5 cut(s) 824, 1159, 1746, 2356, 3008
PdmI GAANNNNTTC 1 cut(s) 2317
PfeI GAWTC 8 cut(s) 5, 72, 206, 771, 1418, 1764, 2036, 2602
PflFI GACNNNGTC 1 cut(s) 2831
PfoI TCCNGGA 3 cut(s) 776, 1033, 2295
PkrI GCNGC 4 cut(s) 34, 37, 652, 796
Ple19I CGATCG 1 cut(s) 270
PleI GAGTC 3 cut(s) 2262, 2489, 2740
PmaCI CACGTG 1 cut(s) 2324
PmlI CACGTG 1 cut(s) 2324
PpsI GAGTC 3 cut(s) 2262, 2489, 2740
Ppu21I YACGTR 4 cut(s) 1480, 1694, 2324, 2441
PscI ACATGT 2 cut(s) 485, 755
Psp124BI GAGCTC 4 cut(s) 282, 2127, 2337, 2406
Psp1406I AACGTT 1 cut(s) 940
Psp6I CCWGG 4 cut(s) 727, 776, 1033, 2295
PspCI CACGTG 1 cut(s) 2324
PspEI GGTNACC 1 cut(s) 1901
PspGI CCWGG 4 cut(s) 727, 776, 1033, 2295
PspN4I GGNNCC 4 cut(s) 432, 723, 933, 1255
PspPI GGNCC 4 cut(s) 272, 722, 1031, 1081
PsrI GAACNNNNNNTAC 2 cut(s) 663, 695
PstNI CAGNNNCTG 1 cut(s) 1801
PsuI RGATCY 5 cut(s) 1063, 1855, 2167, 2236, 2617
PsyI GACNNNGTC 1 cut(s) 2831
PvuI CGATCG 1 cut(s) 270
PvuII CAGCTG 1 cut(s) 35
RsaI GTAC 3 cut(s) 2665, 2844, 2869
RsaNI GTAC 3 cut(s) 2664, 2843, 2868
RseI CAYNNNNRTG 1 cut(s) 1891
SacI GAGCTC 4 cut(s) 282, 2127, 2337, 2406
SatI GCNGC 4 cut(s) 33, 36, 651, 795
Sau96I GGNCC 4 cut(s) 272, 722, 1031, 1081
SchI GAGTC 3 cut(s) 2263, 2489, 2741
ScrFI CCNGG 5 cut(s) 729, 778, 1035, 2297, 2661
SduI GDGCHC 5 cut(s) 282, 1641, 2127, 2337, 2406
SfaNI GCATC 3 cut(s) 991, 1348, 1518
SfcI CTRYAG 2 cut(s) 39, 1591
Sfr274I CTCGAG 1 cut(s) 2534
SfuI TTCGAA 1 cut(s) 61
SinI GGWCC 3 cut(s) 272, 722, 1031
SlaI CTCGAG 1 cut(s) 2534
SmiMI CAYNNNNRTG 1 cut(s) 1891
SmlI CTYRAG 8 cut(s) 325, 2015, 2110, 2182, 2225, 2389, 2534, 2752
SmoI CTYRAG 8 cut(s) 325, 2015, 2110, 2182, 2225, 2389, 2534, 2752
SnaBI TACGTA 1 cut(s) 1694
SsiI CCGC 5 cut(s) 587, 725, 1257, 1264, 3006
SstI GAGCTC 4 cut(s) 282, 2127, 2337, 2406
StyD4I CCNGG 5 cut(s) 727, 776, 1033, 2295, 2659
StyI CCWWGG 4 cut(s) 163, 1005, 1084, 1301
TaaI ACNGT 3 cut(s) 1347, 2177, 2549
TaiI ACGT 8 cut(s) 943, 1482, 1669, 1696, 1776, 2107, 2326, 2443
TaqII GACCGA 1 cut(s) 260
TatI WGTACW 2 cut(s) 2842, 2867
TfiI GAWTC 8 cut(s) 5, 72, 206, 771, 1418, 1764, 2036, 2602
TscAI CASTG 3 cut(s) 616, 2845, 2870
TseFI GTSAC 5 cut(s) 194, 983, 1190, 1367, 2941
TseI GCWGC 4 cut(s) 32, 35, 650, 794
Tsp45I GTSAC 5 cut(s) 194, 983, 1190, 1367, 2941
TspGWI ACGGA 6 cut(s) 683, 821, 1338, 1540, 2354, 2966
TspRI CASTG 3 cut(s) 616, 2845, 2870
Tth111I GACNNNGTC 1 cut(s) 2831
VpaK11BI GGWCC 3 cut(s) 272, 722, 1031
XapI RAATTY 3 cut(s) 65, 461, 1681
XbaI TCTAGA 1 cut(s) 2642
XceI RCATGY 2 cut(s) 489, 759
XhoI CTCGAG 1 cut(s) 2534
XmnI GAANNNNTTC 1 cut(s) 2317
Zsp2I ATGCAT 2 cut(s) 1533, 1746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.