Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001639

Physical Location & Seq

Genomic Coordinates Reverse (-)

26148021 .. 26153600

Gene Structure 5580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G69550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4203 bp

ATGCTAATGGATTCTTCTTTTTTCCTTACCATTGTTGCTGCTGCTTTTGCAATAGGCTTCTTCATCTTTCTTAGAAAGTTGAGAATCCATCAAGAAAACGAAGATGTGGGTTCTTCTTCTACATCTCCTCCATCGTCTTTGGCGTCTTCAACATCTCCTCCATCTACGTTGTCTTCTTCAACATCTCATCCGTCTTCTTCAACTTCTCCTCCATCATCTTTGTCTTGCACCGGGACTCACCATGTATTTCCAAGCTTCCGTGGGGATGACGTTCGCAGAAACTTTCTCAGTCACATTCAAAAGGAGTTTCGGAGAAAAGGAATCACTCCGTTCATCGATAATGAGATTAGGAGAGGAGAATCCATCGGTCCTGAACTCATTAAGGCCATTAGAGAATCTAAGATCGCAATTGTTCTGCTCTCGAGGAACTATGCTTCTTCAAAGTGGTGTCTTGAAGAATTGGTGGAGATTATGAAATGCAAGAAAGAGTTTGGTCTAACAGTGTTTGCCATTTTCTATGAAGTTGATCCATCCCATGTTAAGAAGCTTACCGGAGAATTTGGAGCTGTCTTTCAGAAAACTTGTAAGGGTAGAACAAAGGAGAATATTATGAGATGGAGACAAGCTTTTGAGGAGGTTGCTACAATTGCTGGTTACGATTCAAGAAACTGGGAAAATGAAGCTGCCATGATTGAAGAAATTGCCATTGAAATTTCCAAAAGATTGATTAATTCCTCACCGTTCAGTGGGTTTGAAGGTTTGATTGGGATGAAAGCTCATATAGAAAAGATGAAACAGTTGCTTTGCCTCGATTCAACAGATGAAAGGAGGACGGTTGGTATTTCAGGTCCTTCTGGAATTGGTAAGAGCACTATTGCTAGAGTTCTACATAATCAAATCTCTGATGGTTTTCAAATGAGTGTTTTCATGAAATTCAAACCAAGTTATACAAGACCAATTTGTTCTGATGATCACGATGTGAAGTTGCAATTAGAGCAGCAATTTCTAGCTCAATTGATTAACCAAGAGGATATCAAGATTCATCAGTTAGGAACTGCGCAAAACTTTGTGATGGGAAAGAAAGTGCTTATTGTTCTTGATGGGGTGGATCAATTAGTACAATTACTTGCCATGCCAAAGGCGGTATGCCTCGGTCCTGGATCTCGTATTATCATCACAACACAAGATCAACAACTTTTGAAGGCGTTTCAGATCAAACATATTTACAATGTGGATTTTCCACCAGATCATGAGGCTCTTCAAATCTTCTGCATCCATGCTTTTGGTCATGATTCCCCTGATGATGGTTTCGAGAAGCTTGCTACGAAAGTTACAAGACTTGCTGGTAATCTCCCTTTGGGACTTAGGGTTATGGGTTCTCATTTCCGGGGAATGTCCAAGGAAGATTGGAAAGGGGAACTACCAAGGTTACGGATTCGCCTTGACGGAGAAATAGGGAGCATTTTAAAATTTAGTTACGATGTCTTGGACGACGAAGACAAAGATTTGTTTCTCCATATAGCATGTTTTTTTAACGACGAAGGCATTGATCATACCTTTGAAGATACTCTTCGTCACAAATTCTCAAACGTGCAGCGAGGGCTTCAGGTCTTAGTTCAAAGATCTCTCATATCCGAGGATTTAACTCAACCGATGCATAATCTACTAGTTCAATTGGGTAGAGAAATTGTTCGTAACCAATCCGTTTATGAACCTGGGAAACGTCAATTTCTAGTTGATGGAAAGGAGATTTGTGAAGTACTTACTAGTCATACAGGAAGTGAAAGTGTTATAGGCATAAATTTCGAAGTTTATTGGAGCATGGACGAACTAAATATAAGTGATAGAGTTTTTGAAGGAATGTCTAATCTTCAATTTTTTAGATTCGATGAAAATTCTTATGGAAGATTGCACTTGCCACAAGGTCTAAACTATCTACCTCCAAAACTTAGAATTCTACATTGGGATTACTATCCGATGACAAGTTTGCCTTCTAAGTTTAATCTGAAGTTTCTTGTCAAGATAATATTGAAACACAGTGAGCTCGAGAAACTGTGGGAAGGAATTCAACCGCTTGTCAATCTCAAGGTGATGGATTTACGTTATTCTAGTCATTTGAAAGAGCTTCCTAATCTCTCAACAGCCATTAATCTCCTAGAAATGGTTCTTTCCGATTGCTCAAGTTTGATAGAGCTTCCTTCCTCTATTGGGAATGCTACTAATATCAAGAGCTTAGATATACAAGGTTGCTCAAGCCTATTGAAGCTTCCCTCATCTATTGGAAATCTCATTACTCTCCCGAGATTGGATCTCATGGGATGCTCAAGCCTAGTGGAGCTTCCCTCATCTATCGGAAATCTCATTAATCTCCCGAGATTGGATCTCATGGGATGCTCAAGCCTAGTGGAGCTTCCCTCATCTATCGGAAATCTCATTAATCTCGAGGCTTTTTATTTCCACGGATGTTCAAGTTTACTGGAGCTTCCGTCATCTATTGGAAATCTCATTAGTCTCAAGATACTATACCTAAAAAGAATTTCAAGCCTAGTGGAGATTCCTTCATCTATTGGAAATCTCATTAATCTCAAGTTATTGAATCTAAGTGGATGCTCAAGCTTAGTGGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCAAGAAATTGGATCTAAGTGGATGCTCAAGCTTAGTGGAGCTTCCTTTATCTATTGGGAATCTCATTAATCTCCAGGAACTGTATCTTAGTGAATGCTCAAGCCTAGTAGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCAAGACATTGAATCTAAGTGAATGCTCAAGCCTAGTAGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCCAGGAACTGTATCTTAGTGAATGCTCAAGCCTAGTAGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCAAGAAATTGGATCTAAGTGGATGCTCAAGCTTAGTGGAGCTTCCTTTATCTATTGGAAATCTCATTAATCTCAAGACATTGAATCTAAGTGAATGCTCAAGCCTAGTAGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCCAGGAACTGTATCTTAGTGAATGCTCAAGCCTAGTAGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCAAGAAATTGGATCTAAGTGGATGCTCAAGCTTAGTGGAGCTTCCTTTATCTATTGGAAATCTCATTAATCTCAAGACATTGAATCTAAGTGGATGCTCAAGCTTAGTGGAGCTTCCTTCATCTATTGGGAATCTCAATCTCAAGAAATTGGATCTAAGTGGATGCTCAAGCTTAGTGGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCAAGAAATTGGATCTAAGTGGATGCTCAAGCTTAGTGGAGCTTCCTTTATCTATTGGGAATCTCATTAATCTCCAGGAACTGTATCTTAGTGAATGCTCAAGCCTAGTAGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCCAGGAACTGTATCTTAGTGAATGCTCAAGCCTAGTAGAGCTTCCTTCATCTATTGGGAATCTCATTAATCTCAAGAAATTGGATCTCAACAAATGCACGAAGCTGGTATCACTCCCGCAGCTTCCAGATTCCTTATCAGTTTTAGTTGCAGAATCATGTGAGTCCTTGGAGACACTTGCTTGCTCCTTTCCGAATCCCCAAGTTTGGCTCAAATTTATTGACTGCTGGAAACTGAATGAAAAAGGGAGAGATATCATCGTCCAGACATCGACAAGTAACTACACGATGTTACCAGGTAGAGAAGTGCCTGCGTTTTTCACTTACCGAGCTACCACTGGAGGTTCTCTGGCAGTGAAGTTGAATGAGAGGCATTGTCGTACATCTTGTAGATTTAAAGCTTGCATCTTGCTGGTTAGAAAGGGTGACAAAATTGACTGTGAGGAATGGGGGTCCGTATATCTTACCGTCCTAGAGAAACAGAGTGGTCGCAAGTATAGTTTAGAAAGCCCAACTCTATATCCACTTTTAACTGAGCATCTGTACACATTCGAAATCGAAGCAAAAGGTGTGAAATCCGTAGAGCTTGTCATTAAGTTCCAATTCGGCAGGAAAAAATGGGAGATAGGTGAATGCGGGATACGCCCACTCTTGGAGGAGGACACTCACGTCGAAAGTTCTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009719 GO:0009725 GO:0009733 GO:0009751 GO:0009814 GO:0009817 GO:0009862 GO:0009863 GO:0009987 GO:0010033 GO:0014070 GO:0019904 GO:0023052 GO:0030275 GO:0032870 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046677 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_3 NB-ARC TIR

Protein Analysis

1400

Amino Acids

155.2

Weight (kDa)

5.76

Isoelectric Point (pI)

49.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	80 - 251	2.5e-59	TIR domain
TIR_2	PF13676	82 - 176	8e-13	TIR domain
NB-ARC	PF00931	258 - 429	2.8e-09	NB-ARC domain
WHD_ROQ1	PF23282	498 - 568	6.4e-13	Disease resistance protein Roq1-like, winged-helix domain
LRR_3	PF07725	671 - 690	1.1e-06	Leucine Rich Repeat
LRR_14	PF23598	745 - 846	6e-11	Leucine-rich repeat region
LRR_14	PF23598	830 - 917	4.3e-11	Leucine-rich repeat region
LRR_14	PF23598	855 - 938	1.3e-11	Leucine-rich repeat region
LRR_14	PF23598	920 - 989	4.4e-10	Leucine-rich repeat region
LRR_14	PF23598	975 - 1061	1.3e-12	Leucine-rich repeat region
LRR_14	PF23598	1056 - 1157	9.5e-12	Leucine-rich repeat region
LRR_14	PF23598	1103 - 1205	3.3e-12	Leucine-rich repeat region
C-JID	PF20160	1270 - 1357	1.1e-06	C-JID domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001639)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G57650 AT1G57650 AT1G57650 AT1G57650 AT1G65850 AT1G65850 AT1G65850 AT1G69550 AT2G14080 AT2G14080 AT3G04210 AT3G04210 AT3G04220 AT3G04220 AT3G04220 AT3G25505 AT3G25510 AT3G25510 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44630 AT3G44630 AT3G44630 AT3G44630 AT3G44670 AT3G44670 AT4G11170 AT5G11250 AT5G11250 AT5G11250 AT5G17970 AT5G18350 AT5G18370 AT5G38340 AT5G38340 AT5G38340 AT5G38350 AT5G44510 AT5G44510 AT5G44510 AT5G44510

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT1G57650 AT1G57650 AT1G57650 AT1G57650 AT1G65850 AT1G65850 AT1G65850 AT1G69550 AT2G14080 AT2G14080 AT3G04210 AT3G04210 AT3G04220 AT3G04220 AT3G04220 AT3G25505 AT3G25510 AT3G25510 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44630 AT3G44630 AT3G44630 AT3G44630 AT3G44670 AT3G44670 AT4G11170 AT5G11250 AT5G11250 AT5G11250 AT5G17970 AT5G18350 AT5G18370 AT5G38340 AT5G38340 AT5G38340 AT5G38350 AT5G44510 AT5G44510 AT5G44510 AT5G44510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	4184
Acc16I	TGCGCA	1 cut(s)	1059
AciI	CCGC	4 cut(s)	1142, 2072, 3635, 4152
AcuI	CTGAAG	2 cut(s)	1589, 2027
AcyI	GRCGYC	1 cut(s)	143
AdeI	CACNNNGTG	1 cut(s)	979
AfaI	GTAC	4 cut(s)	1119, 1761, 3898, 4061
AfiI	CCNNNNNNNGG	8 cut(s)	746, 1304, 2161, 2208, 2305, 2377, 3723, 4168
AhlI	ACTAGT	2 cut(s)	1666, 1766
AjiI	CACGTC	1 cut(s)	4186
AjnI	CCWGG	8 cut(s)	1156, 1714, 2730, 2874, 3090, 3447, 3519, 3811
AjuI	GAANNNNNNNTTGG	4 cut(s)	747, 779, 1945, 1977
Alw21I	GWGCWC	2 cut(s)	872, 2046
Alw26I	GTCTC	3 cut(s)	613, 2516, 3683
AlwNI	CAGNNNCTG	5 cut(s)	2737, 2881, 3097, 3454, 3526
Ama87I	CYCGRG	5 cut(s)	421, 2045, 2299, 2371, 2441
AoxI	GGCC	1 cut(s)	384
ApeKI	GCWGC	6 cut(s)	38, 41, 683, 997, 1594, 3637
Asp700I	GAANNNNTTC	3 cut(s)	1689, 2064, 2163
AspLEI	GCGC	1 cut(s)	1060
AspS9I	GGNCC	4 cut(s)	368, 848, 1154, 3969
AsuC2I	CCSGG	2 cut(s)	232, 1388
AsuHPI	GGTGA	5 cut(s)	230, 729, 2101, 3953, 4157
AsuII	TTCGAA	2 cut(s)	1806, 4068
AvaI	CYCGRG	5 cut(s)	421, 2045, 2299, 2371, 2441
AvaII	GGWCC	4 cut(s)	368, 848, 1154, 3969
BanII	GRGCYC	1 cut(s)	2046
BbsI	GAAGAC	4 cut(s)	138, 165, 186, 1503
Bbv12I	GWGCWC	2 cut(s)	872, 2046
BbvI	GCAGC	6 cut(s)	25, 28, 670, 1009, 1606, 3649
BcgI	CGANNNNNNTGC	4 cut(s)	1301, 1335, 1786, 1820
BciT130I	CCWGG	8 cut(s)	1158, 1716, 2732, 2876, 3092, 3449, 3521, 3813
BciVI	GTATCC	1 cut(s)	4149
BclI	TGATCA	2 cut(s)	970, 1549
BcnI	CCSGG	2 cut(s)	232, 1388
BcoDI	GTCTC	3 cut(s)	613, 2516, 3683
BcuI	ACTAGT	2 cut(s)	1666, 1766
BfuI	GTATCC	1 cut(s)	4149
BglII	AGATCT	1 cut(s)	1622
BisI	GCNGC	6 cut(s)	39, 42, 684, 998, 1595, 3638
BlsI	GCNGC	6 cut(s)	40, 43, 685, 999, 1596, 3639
BmcAI	AGTACT	1 cut(s)	1761
Bme18I	GGWCC	4 cut(s)	368, 848, 1154, 3969
BmeT110I	CYCGRG	5 cut(s)	421, 2045, 2299, 2371, 2441
BmgBI	CACGTC	1 cut(s)	4186
BmgT120I	GGNCC	4 cut(s)	368, 848, 1154, 3969
BmiI	GGNNCC	1 cut(s)	3970
BmrI	ACTGGG	1 cut(s)	679
BmuI	ACTGGG	1 cut(s)	679
BpiI	GAAGAC	4 cut(s)	138, 165, 186, 1503
BplI	GAGNNNNNCTC	4 cut(s)	2327, 2359, 2399, 2431
BpmI	CTGGAG	7 cut(s)	2498, 2714, 2858, 3074, 3431, 3503, 3876
Bpu14I	TTCGAA	2 cut(s)	1806, 4068
BpuMI	CCSGG	2 cut(s)	232, 1388
Bsa29I	ATCGAT	1 cut(s)	336
BsaBI	GATNNNNATC	1 cut(s)	1971
BsaHI	GRCGYC	1 cut(s)	143
BsaJI	CCNNGG	9 cut(s)	259, 1150, 1387, 1398, 1424, 1635, 1715, 2458, 3684
BsaWI	WCCGGW	1 cut(s)	551
BsaXI	ACNNNNNCTCC	8 cut(s)	112, 142, 142, 172, 193, 223, 2471, 2501
Bsc4I	CCNNNNNNNGG	8 cut(s)	746, 1304, 2161, 2208, 2305, 2377, 3723, 4168
Bse1I	ACTGG	3 cut(s)	674, 2481, 3859
Bse8I	GATNNNNATC	1 cut(s)	1971
BseBI	CCWGG	8 cut(s)	1158, 1716, 2732, 2876, 3092, 3449, 3521, 3813
BseCI	ATCGAT	1 cut(s)	336
BseDI	CCNNGG	9 cut(s)	259, 1150, 1387, 1398, 1424, 1635, 1715, 2458, 3684
BseJI	GATNNNNATC	1 cut(s)	1971
BseLI	CCNNNNNNNGG	8 cut(s)	746, 1304, 2161, 2208, 2305, 2377, 3723, 4168
BseMII	CTCAG	2 cut(s)	301, 4041
BseNI	ACTGG	3 cut(s)	674, 2481, 3859
BseRI	GAGGAG	6 cut(s)	117, 147, 198, 369, 647, 4187
BseXI	GCAGC	6 cut(s)	25, 28, 670, 1009, 1606, 3649
BsgI	GTGCAG	1 cut(s)	1613
BshFI	GGCC	1 cut(s)	386
BshVI	ATCGAT	1 cut(s)	336
BsiHKAI	GWGCWC	2 cut(s)	872, 2046
BsiHKCI	CYCGRG	5 cut(s)	421, 2045, 2299, 2371, 2441
BsiSI	CCGG	3 cut(s)	231, 552, 1387
BslFI	GGGAC	2 cut(s)	247, 1374
BslI	CCNNNNNNNGG	8 cut(s)	746, 1304, 2161, 2208, 2305, 2377, 3723, 4168
BsmAI	GTCTC	3 cut(s)	613, 2516, 3683
BsmFI	GGGAC	2 cut(s)	247, 1374
BsmI	GAATGC	9 cut(s)	2218, 2756, 2828, 2900, 3044, 3116, 3473, 3545, 4154
BsnI	GGCC	1 cut(s)	386
BsoBI	CYCGRG	5 cut(s)	421, 2045, 2299, 2371, 2441
Bsp119I	TTCGAA	2 cut(s)	1806, 4068
Bsp1286I	GDGCHC	2 cut(s)	872, 2046
Bsp1407I	TGTACA	1 cut(s)	4059
BspACI	CCGC	4 cut(s)	1142, 2072, 3635, 4152
BspANI	GGCC	1 cut(s)	386
BspCNI	CTCAG	2 cut(s)	300, 4042
BspDI	ATCGAT	1 cut(s)	336
BspHI	TCATGA	3 cut(s)	927, 1249, 1288
BspLI	GGNNCC	1 cut(s)	3970
BspQI	GCTCTTC	1 cut(s)	1263
BspT104I	TTCGAA	2 cut(s)	1806, 4068
BsrGI	TGTACA	1 cut(s)	4059
BsrI	ACTGG	3 cut(s)	674, 2481, 3859
BssECI	CCNNGG	9 cut(s)	259, 1150, 1387, 1398, 1424, 1635, 1715, 2458, 3684
BssNI	GRCGYC	1 cut(s)	143
BssT1I	CCWWGG	3 cut(s)	1398, 1424, 3684
Bst2UI	CCWGG	8 cut(s)	1158, 1716, 2732, 2876, 3092, 3449, 3521, 3813
Bst6I	CTCTTC	2 cut(s)	1263, 1575
BstACI	GRCGYC	1 cut(s)	143
BstAUI	TGTACA	1 cut(s)	4059
BstBI	TTCGAA	2 cut(s)	1806, 4068
BstC8I	GCNNGC	4 cut(s)	1320, 3700, 3828, 3919
BstDSI	CCRYGG	2 cut(s)	259, 2458
BstHHI	GCGC	1 cut(s)	1060
BstMAI	GTCTC	3 cut(s)	613, 2516, 3683
BstMWI	GCNNNNNNNGC	5 cut(s)	47, 647, 994, 1600, 4158
BstNI	CCWGG	8 cut(s)	1158, 1716, 2732, 2876, 3092, 3449, 3521, 3813
BstNSI	RCATGY	1 cut(s)	1527
BstV1I	GCAGC	6 cut(s)	25, 28, 670, 1009, 1606, 3649
BstV2I	GAAGAC	4 cut(s)	138, 165, 186, 1503
BstXI	CCANNNNNNTGG	1 cut(s)	1283
Bsu15I	ATCGAT	1 cut(s)	336
BsuI	GTATCC	1 cut(s)	4149
BsuRI	GGCC	1 cut(s)	386
BsuTUI	ATCGAT	1 cut(s)	336
BtgI	CCRYGG	2 cut(s)	259, 2458
BtrI	CACGTC	1 cut(s)	4186
BtsI	GCAGTG	1 cut(s)	3876
BtsIMutI	CAGTG	5 cut(s)	507, 751, 2044, 3852, 3876
Cac8I	GCNNGC	4 cut(s)	1320, 3700, 3828, 3919
CaiI	CAGNNNCTG	5 cut(s)	2737, 2881, 3097, 3454, 3526
CciI	TCATGA	3 cut(s)	927, 1249, 1288
CfoI	GCGC	1 cut(s)	1060
Cfr13I	GGNCC	4 cut(s)	368, 848, 1154, 3969
ClaI	ATCGAT	1 cut(s)	336
CseI	GACGC	1 cut(s)	132
CsiI	ACCWGGT	1 cut(s)	3811
Csp6I	GTAC	4 cut(s)	1118, 1760, 3897, 4060
CviQI	GTAC	4 cut(s)	1118, 1760, 3897, 4060
DraI	TTTAAA	2 cut(s)	1467, 3913
DraIII	CACNNNGTG	1 cut(s)	979
DrdI	GACNNNNNNGTC	1 cut(s)	4184
DseDI	GACNNNNNNGTC	1 cut(s)	4184
Eam1104I	CTCTTC	2 cut(s)	1263, 1575
EarI	CTCTTC	2 cut(s)	1263, 1575
Ecl136II	GAGCTC	1 cut(s)	2044
Eco130I	CCWWGG	3 cut(s)	1398, 1424, 3684
Eco24I	GRGCYC	1 cut(s)	2046
Eco32I	GATATC	2 cut(s)	1033, 3772
Eco47I	GGWCC	4 cut(s)	368, 848, 1154, 3969
Eco53kI	GAGCTC	1 cut(s)	2044
Eco57I	CTGAAG	2 cut(s)	1589, 2027
Eco88I	CYCGRG	5 cut(s)	421, 2045, 2299, 2371, 2441
EcoICRI	GAGCTC	1 cut(s)	2044
EcoO109I	RGGNCCY	1 cut(s)	848
EcoRI	GAATTC	2 cut(s)	1953, 2064
EcoRII	CCWGG	8 cut(s)	1156, 1714, 2730, 2874, 3090, 3447, 3519, 3811
EcoRV	GATATC	2 cut(s)	1033, 3772
EcoT14I	CCWWGG	3 cut(s)	1398, 1424, 3684
EcoT22I	ATGCAT	1 cut(s)	1659
EcoT38I	GRGCYC	1 cut(s)	2046
ErhI	CCWWGG	3 cut(s)	1398, 1424, 3684
FalI	AAGNNNNNCTT	4 cut(s)	1554, 1586, 1975, 2007
FaqI	GGGAC	2 cut(s)	247, 1374
FauI	CCCGC	2 cut(s)	3642, 4145
FbaI	TGATCA	2 cut(s)	970, 1549
Fnu4HI	GCNGC	6 cut(s)	39, 42, 684, 998, 1595, 3638
FriOI	GRGCYC	1 cut(s)	2046
Fsp4HI	GCNGC	6 cut(s)	39, 42, 684, 998, 1595, 3638
FspI	TGCGCA	1 cut(s)	1059
GlaI	GCGC	1 cut(s)	1059
GluI	GCNGC	6 cut(s)	39, 42, 684, 998, 1595, 3638
GsuI	CTGGAG	7 cut(s)	2498, 2714, 2858, 3074, 3431, 3503, 3876
HaeIII	GGCC	1 cut(s)	386
HapII	CCGG	3 cut(s)	231, 552, 1387
HgaI	GACGC	1 cut(s)	132
HhaI	GCGC	1 cut(s)	1060
Hin1I	GRCGYC	1 cut(s)	143
Hin6I	GCGC	1 cut(s)	1058
HinP1I	GCGC	1 cut(s)	1058
HpaII	CCGG	3 cut(s)	231, 552, 1387
HphI	GGTGA	5 cut(s)	230, 729, 2101, 3953, 4157
Hpy166II	GTNNAC	2 cut(s)	2474, 4062
Hpy8I	GTNNAC	2 cut(s)	2474, 4062
Hpy99I	CGWCG	3 cut(s)	1496, 1541, 4190
HpyCH4IV	ACGT	6 cut(s)	167, 270, 1590, 1723, 2101, 4185
HpyF10VI	GCNNNNNNNGC	5 cut(s)	47, 647, 994, 1600, 4158
HpySE526I	ACGT	6 cut(s)	167, 270, 1590, 1723, 2101, 4185
Hsp92I	GRCGYC	1 cut(s)	143
HspAI	GCGC	1 cut(s)	1058
Ksp22I	TGATCA	2 cut(s)	970, 1549
LguI	GCTCTTC	1 cut(s)	1263
Lsp1109I	GCAGC	6 cut(s)	25, 28, 670, 1009, 1606, 3649
MabI	ACCWGGT	1 cut(s)	3811
MaeII	ACGT	6 cut(s)	167, 270, 1590, 1723, 2101, 4185
MfeI	CAATTG	4 cut(s)	408, 645, 1013, 1673
MhlI	GDGCHC	2 cut(s)	872, 2046
MlyI	GAGTC	2 cut(s)	229, 3689
Mph1103I	ATGCAT	1 cut(s)	1659
MroXI	GAANNNNTTC	3 cut(s)	1689, 2064, 2163
MspI	CCGG	3 cut(s)	231, 552, 1387
MunI	CAATTG	4 cut(s)	408, 645, 1013, 1673
Mva1269I	GAATGC	9 cut(s)	2218, 2756, 2828, 2900, 3044, 3116, 3473, 3545, 4154
MvaI	CCWGG	8 cut(s)	1158, 1716, 2732, 2876, 3092, 3449, 3521, 3813
MwoI	GCNNNNNNNGC	5 cut(s)	47, 647, 994, 1600, 4158
NciI	CCSGG	2 cut(s)	232, 1388
NlaIV	GGNNCC	1 cut(s)	3970
NmuCI	GTSAC	3 cut(s)	290, 1574, 3941
NsbI	TGCGCA	1 cut(s)	1059
NsiI	ATGCAT	1 cut(s)	1659
NspI	RCATGY	1 cut(s)	1527
NspV	TTCGAA	2 cut(s)	1806, 4068
PaeR7I	CTCGAG	3 cut(s)	421, 2045, 2441
PagI	TCATGA	3 cut(s)	927, 1249, 1288
PciSI	GCTCTTC	1 cut(s)	1263
PcsI	WCGNNNNNNNCGW	1 cut(s)	140
PctI	GAATGC	9 cut(s)	2218, 2756, 2828, 2900, 3044, 3116, 3473, 3545, 4154
PdmI	GAANNNNTTC	3 cut(s)	1689, 2064, 2163
PfoI	TCCNGGA	6 cut(s)	1156, 2730, 2874, 3090, 3447, 3519
PkrI	GCNGC	6 cut(s)	40, 43, 685, 999, 1596, 3639
PleI	GAGTC	2 cut(s)	229, 3688
PpsI	GAGTC	2 cut(s)	229, 3688
PpuMI	RGGWCCY	1 cut(s)	848
Psp124BI	GAGCTC	1 cut(s)	2046
Psp5II	RGGWCCY	1 cut(s)	848
Psp6I	CCWGG	8 cut(s)	1156, 1714, 2730, 2874, 3090, 3447, 3519, 3811
PspGI	CCWGG	8 cut(s)	1156, 1714, 2730, 2874, 3090, 3447, 3519, 3811
PspN4I	GGNNCC	1 cut(s)	3970
PspPI	GGNCC	4 cut(s)	368, 848, 1154, 3969
PspPPI	RGGWCCY	1 cut(s)	848
PstNI	CAGNNNCTG	5 cut(s)	2737, 2881, 3097, 3454, 3526
RsaI	GTAC	4 cut(s)	1119, 1761, 3898, 4061
RsaNI	GTAC	4 cut(s)	1118, 1760, 3897, 4060
SacI	GAGCTC	1 cut(s)	2046
SapI	GCTCTTC	1 cut(s)	1263
SatI	GCNGC	6 cut(s)	39, 42, 684, 998, 1595, 3638
Sau96I	GGNCC	4 cut(s)	368, 848, 1154, 3969
ScaI	AGTACT	1 cut(s)	1761
SchI	GAGTC	2 cut(s)	229, 3689
SduI	GDGCHC	2 cut(s)	872, 2046
SexAI	ACCWGGT	1 cut(s)	3811
Sfr274I	CTCGAG	3 cut(s)	421, 2045, 2441
SfuI	TTCGAA	2 cut(s)	1806, 4068
SinI	GGWCC	4 cut(s)	368, 848, 1154, 3969
SlaI	CTCGAG	3 cut(s)	421, 2045, 2441
SpeI	ACTAGT	2 cut(s)	1666, 1766
SsiI	CCGC	4 cut(s)	1142, 2072, 3635, 4152
SspI	AATATT	2 cut(s)	607, 2028
SstI	GAGCTC	1 cut(s)	2046
StyI	CCWWGG	3 cut(s)	1398, 1424, 3684
TaiI	ACGT	6 cut(s)	170, 273, 1593, 1726, 2104, 4188
TaqII	GACCGA	2 cut(s)	356, 1142
TatI	WGTACW	3 cut(s)	1117, 1759, 4059
TscAI	CASTG	5 cut(s)	507, 751, 2044, 3859, 3876
TseFI	GTSAC	3 cut(s)	290, 1574, 3941
TseI	GCWGC	6 cut(s)	38, 41, 683, 997, 1594, 3637
Tsp45I	GTSAC	3 cut(s)	290, 1574, 3941
TspRI	CASTG	5 cut(s)	507, 751, 2044, 3859, 3876
VpaK11BI	GGWCC	4 cut(s)	368, 848, 1154, 3969
XceI	RCATGY	1 cut(s)	1527
XhoI	CTCGAG	3 cut(s)	421, 2045, 2441
XmnI	GAANNNNTTC	3 cut(s)	1689, 2064, 2163
ZrmI	AGTACT	1 cut(s)	1761
Zsp2I	ATGCAT	1 cut(s)	1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.