Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001639

Physical Location & Seq

Genomic Coordinates Forward (+)

15328569 .. 15331528

Gene Structure 2960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G38350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGACCGAAAAGATCGCTACAGATGTTTCTAACATGCTGAATAATTACTCACCGTCAAGAGATTTTGATGGTTTGATTGGGATGGATGCTCATATGAAAGAAATGGAATCGTTGTTATGCCTAGACTCTGATGAAGTAAGGATGATTGGGATTTGGGGTCCGTCTGGGATTGGGAAGACCACCATTGCCAGAGTCTTATATAGCCAATTTTCTGAAAATTTTGAATTGAGTATCTTCATGGGGAATATCAAAGAGTTGATGTATACAAGACCAGTGTGTTCTGATGAGTATAGTGCGAAGATTCAGTTACAGAAACAATTTTTATCCCAAATAATCAACCACAAGGATATGGAGCTTCATCATTTAGGAGTTGCACAGGATAGGTTGAACGACAAGAAAGTGCTTATTGTTCTCGATAGCATTGATCAGTCAATACAACTAGATGCTATTGCAAAAGAAACTCGGTGGTTTGGCCATGGAAGTCGGATTATCATCACAACACAAGACCAAAAACTTTTGAAGGCACATGGAATCAACCATATTTACAAGGTGGAGTTTCCATCAGCATATGAAGCTTATCAGATGTTTTGTATGTATGCTTTTGGCCAAAACTTCCCTAATGATGGTTTCGAGGAGCTTGCTTGGGAAGTTACAAAACTTTTAGGTCATCTACCTTTGGGACTAAGAGTTATGGGTTCCCACTTCCGAGGAATGTCTAGGCATGAGTGGGTAAATGCTTTACCAAGGTTAAAGATTCGCCTTGATGCTAGTATTCAAAGCATTTTAAAGTTCAGTTACGATGCCTTATGTGAGGAAGATAAAGATTTGTTCCTTCATATAGCTTGCCTTTTCAACAATCAAGAAATGGTGGAAGTTGAAGATTATCTTGCTTTAAGTTTCTTGGACGTGAGGCAAGGGTTTCACCTCTTAGCCGAGAAATCTCTCATAAATCTTAAGTTTTTATCTACTAACTGTACACGTATAGAGATGCACAATCTACTAGTGCAATTAGGTAAAGACATTGTTCGTCATAAGCCTGGGCACCAATCCATTTGTGAGCCTGGGAAGCGTCAATTTTTGATTGATGCTAGAGATATTTGTGAAGTACTCACTGATAACACGGGTAATAGAAATGTTGTAGGTATATTTTTGGAAGTAAGAAACCTATCATGCCAATTAAATATAAGTGAGAGAGCTTTTGACGGAATGTCAAACCTTAAATTCTTAAGATTCCATGACCCATATGACGACGAAAGTGATAAATTGTACTTGCCACAAGGGTTGAATAATCTACCTCAGAAACTTAGATTAATAGAATGGAGCCGGTTTCCGATGACTTGTTTGCCTTCTAATTTTTGTACGAAGTATCTAGTCGAGATACGTATGAAGAACAGCAAACTTCAGAACTTGTGGCAAGGAAATCAGCCCCTTGGAAATCTCAAGAGGATGGATTTGAGTGAGTCGAAACACCTAAAAGAACTACCTGATCTCTCAACTGCCACTAACCTTGAATATTTGATTATGTCTGGATGCATAAGTTTGGTGGAGCTCCCCTCCTCTATTGGAAAGCTTCGTAAATTGCTAATGTTGAGTTTACGAGGCTGCTCAAAGCTAGAGGCTCTTCCAACCAATATCAACTTGGAATCTCTCGATTACCTTGATCTCACTGATTGCTTATTGATCAAAAAATTTCCTGAGATCTCTACAAACATTAAGGATCTCAAGCTCACGAAAACTGCAATAAAAGAGGTACCTTCGACGATCAAGTCATGGTCTCATCTTCGTAAACTGGAAATGTCATACAGTGAAAACCTCAAGGAACTCCCGCATGCTCTTGATATCATCACAACGCTGTACATTAACGATACAGAAATGCAAGAAATTCCTCAGTGGGTTAAGAAAATCTCTCATCTTCAGACACTTGGGCTAGAGGGATGCAAGAGGCTGGTAACAATCCCACAACTTTCAGATTCCCTATCACAACTAGTGGTAACAAACTGTGAGTCATTGGAGAGACTTAATTTCTCCTTTCAAAATCATCCAGAGAGATTTCTCTGGTTTCTAAATTGCTTCAAGCTAAATAATGAAGCGAGAGAATTCATCCAAACTAGTAGTACCCATGCGATCTTACCTAGTAGAGAAGTGCCTGCAAACTTCACTTACCGAGCTAATGGGAGTTCCATAATGGTAAATCTGAATCATAGGCCTCTTTCTACAACTTTGAGATTTAAGGCTTGCGTCTTGCTAGTTAAAAAAATTGACAATGATAAGGAGGAGGCCGCTGATAGGAGAACAACTGTAATTCCTAGAATCAGGGAGAACGATAAAATTGGCGTCGATGTTCCATGGAGATATCGCTTTCACGTGCCTACCATTTTAGAAGACCATTTGCTCACCTTCCAAATTGAAGCTGATGTGACGTCCAACAAGCTTTTATTTTCGTTCGACATCAAGGACAACAACCAAGCGGTGATTAAAGAATGTGGAGTACTCCAACTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009719 GO:0009725 GO:0009733 GO:0009751 GO:0009814 GO:0009817 GO:0009862 GO:0009863 GO:0009987 GO:0010033 GO:0014070 GO:0019904 GO:0023052 GO:0030275 GO:0032870 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046677 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_3 NB-ARC TIR

Protein Analysis

833

Amino Acids

95.82

Weight (kDa)

6.43

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	36 - 203	8.2e-13	NB-ARC domain
WHD_ROQ1	PF23282	271 - 344	4.1e-14	Disease resistance protein Roq1-like, winged-helix domain
C-JID	PF20160	710 - 787	1.3e-07	C-JID domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001639)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G57650 AT1G57650 AT1G57650 AT1G57650 AT1G65850 AT1G65850 AT1G65850 AT1G69550 AT2G14080 AT2G14080 AT3G04210 AT3G04210 AT3G04220 AT3G04220 AT3G04220 AT3G25505 AT3G25510 AT3G25510 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44630 AT3G44630 AT3G44630 AT3G44630 AT3G44670 AT3G44670 AT4G11170 AT5G11250 AT5G11250 AT5G11250 AT5G17970 AT5G18350 AT5G18370 AT5G38340 AT5G38340 AT5G38340 AT5G38350 AT5G44510 AT5G44510 AT5G44510 AT5G44510

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT1G57650 AT1G57650 AT1G57650 AT1G57650 AT1G65850 AT1G65850 AT1G65850 AT1G69550 AT2G14080 AT2G14080 AT3G04210 AT3G04210 AT3G04220 AT3G04220 AT3G04220 AT3G25505 AT3G25510 AT3G25510 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44400 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44480 AT3G44630 AT3G44630 AT3G44630 AT3G44630 AT3G44670 AT3G44670 AT4G11170 AT5G11250 AT5G11250 AT5G11250 AT5G17970 AT5G18350 AT5G18370 AT5G38340 AT5G38340 AT5G38340 AT5G38350 AT5G44510 AT5G44510 AT5G44510 AT5G44510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1765
AatII	GACGTC	1 cut(s)	2423
Acc65I	GGTACC	1 cut(s)	1750
AccB1I	GGYRCC	2 cut(s)	1041, 1750
AccI	GTMKAC	1 cut(s)	263
AciI	CCGC	3 cut(s)	1826, 2280, 2468
AclWI	GGATC	1 cut(s)	1725
AcoI	YGGCCR	2 cut(s)	472, 604
AcsI	RAATTY	5 cut(s)	217, 1220, 1688, 1881, 2096
AcuI	CTGAAG	2 cut(s)	1385, 1898
AcvI	CACGTG	1 cut(s)	2365
AcyI	GRCGYC	2 cut(s)	2334, 2420
AfaI	GTAC	8 cut(s)	976, 1107, 1268, 1360, 1752, 1856, 2116, 2490
AfiI	CCNNNNNNNGG	2 cut(s)	623, 2286
AflII	CTTAAG	2 cut(s)	953, 1225
AflIII	ACRYGT	1 cut(s)	977
AhdI	GACNNNNNGTC	1 cut(s)	1207
AhlI	ACTAGT	3 cut(s)	1000, 1984, 2108
AjiI	CACGTC	1 cut(s)	907
AjnI	CCWGG	2 cut(s)	1036, 1060
Alw21I	GWGCWC	1 cut(s)	1551
Alw26I	GTCTC	2 cut(s)	1779, 2008
AlwI	GGATC	1 cut(s)	1725
AoxI	GGCC	4 cut(s)	472, 604, 2204, 2277
ApeKI	GCWGC	1 cut(s)	1602
ApoI	RAATTY	5 cut(s)	217, 1220, 1688, 1881, 2096
ArsI	GACNNNNNNTTYG	2 cut(s)	1988, 2020
AseI	ATTAAT	1 cut(s)	1310
Asp718I	GGTACC	1 cut(s)	1750
AspS9I	GGNCC	1 cut(s)	158
AsuHPI	GGTGA	4 cut(s)	42, 914, 2386, 2482
AvaII	GGWCC	1 cut(s)	158
BaeGI	GKGCMC	1 cut(s)	1044
BalI	TGGCCA	2 cut(s)	474, 606
BanI	GGYRCC	2 cut(s)	1041, 1750
BanII	GRGCYC	1 cut(s)	1551
BbrPI	CACGTG	1 cut(s)	2365
BbsI	GAAGAC	2 cut(s)	182, 2388
Bbv12I	GWGCWC	1 cut(s)	1551
BbvI	GCAGC	1 cut(s)	1589
BccI	CCATC	5 cut(s)	62, 76, 568, 617, 1441
BcgI	CGANNNNNNTGC	2 cut(s)	620, 654
BciT130I	CCWGG	2 cut(s)	1038, 1062
BclI	TGATCA	2 cut(s)	424, 1680
BcoDI	GTCTC	2 cut(s)	1779, 2008
BcuI	ACTAGT	3 cut(s)	1000, 1984, 2108
BfmI	CTRYAG	1 cut(s)	18
BfrI	CTTAAG	2 cut(s)	953, 1225
BglII	AGATCT	1 cut(s)	1698
BisI	GCNGC	2 cut(s)	1603, 2280
BlsI	GCNGC	2 cut(s)	1604, 2281
BmcAI	AGTACT	2 cut(s)	1107, 2490
Bme1390I	CCNGG	2 cut(s)	1038, 1062
Bme18I	GGWCC	1 cut(s)	158
BmeRI	GACNNNNNGTC	1 cut(s)	1207
BmgBI	CACGTC	1 cut(s)	907
BmgT120I	GGNCC	1 cut(s)	158
BmiI	GGNNCC	5 cut(s)	159, 697, 1043, 1322, 1752
BmrFI	CCNGG	2 cut(s)	1038, 1062
BmsI	GCATC	8 cut(s)	76, 433, 754, 790, 978, 1075, 1520, 1925
BpiI	GAAGAC	2 cut(s)	182, 2388
BplI	GAGNNNNNCTC	2 cut(s)	1538, 1570
BpuEI	CTTGAG	3 cut(s)	1424, 1706, 1799
BsaAI	YACGTR	3 cut(s)	980, 1382, 2365
BsaBI	GATNNNNATC	1 cut(s)	491
BsaHI	GRCGYC	2 cut(s)	2334, 2420
BsaI	GGTCTC	1 cut(s)	1779
BsaJI	CCNNGG	7 cut(s)	475, 706, 743, 1037, 1061, 1429, 2345
Bsc4I	CCNNNNNNNGG	2 cut(s)	623, 2286
Bse118I	RCCGGY	1 cut(s)	1323
Bse1I	ACTGG	2 cut(s)	272, 1794
Bse3DI	GCAATG	1 cut(s)	183
Bse8I	GATNNNNATC	1 cut(s)	491
BseBI	CCWGG	2 cut(s)	1038, 1062
BseDI	CCNNGG	7 cut(s)	475, 706, 743, 1037, 1061, 1429, 2345
BseGI	GGATG	8 cut(s)	87, 91, 147, 1452, 1535, 1940, 2038, 2100
BseJI	GATNNNNATC	1 cut(s)	491
BseLI	CCNNNNNNNGG	2 cut(s)	623, 2286
BseMI	GCAATG	1 cut(s)	183
BseMII	CTCAG	3 cut(s)	1310, 1686, 1901
BseNI	ACTGG	2 cut(s)	272, 1794
BseRI	GAGGAG	3 cut(s)	647, 1546, 2288
BseSI	GKGCMC	1 cut(s)	1044
BseXI	GCAGC	1 cut(s)	1589
BshFI	GGCC	4 cut(s)	474, 606, 2206, 2279
BshNI	GGYRCC	2 cut(s)	1041, 1750
BsiHKAI	GWGCWC	1 cut(s)	1551
BsiSI	CCGG	1 cut(s)	1324
BslFI	GGGAC	1 cut(s)	693
BslI	CCNNNNNNNGG	2 cut(s)	623, 2286
BsmAI	GTCTC	2 cut(s)	1779, 2008
BsmFI	GGGAC	1 cut(s)	693
BsnI	GGCC	4 cut(s)	474, 606, 2206, 2279
Bso31I	GGTCTC	1 cut(s)	1779
Bsp1286I	GDGCHC	2 cut(s)	1044, 1551
Bsp1407I	TGTACA	2 cut(s)	974, 1854
Bsp143I	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
Bsp19I	CCATGG	2 cut(s)	475, 2345
BspACI	CCGC	3 cut(s)	1826, 2280, 2468
BspANI	GGCC	4 cut(s)	474, 606, 2206, 2279
BspCNI	CTCAG	3 cut(s)	1309, 1687, 1900
BspLI	GGNNCC	5 cut(s)	159, 697, 1043, 1322, 1752
BspPI	GGATC	1 cut(s)	1725
BspQI	GCTCTTC	1 cut(s)	1626
BspT107I	GGYRCC	2 cut(s)	1041, 1750
BspTI	CTTAAG	2 cut(s)	953, 1225
BspTNI	GGTCTC	1 cut(s)	1779
BsrDI	GCAATG	1 cut(s)	183
BsrFI	RCCGGY	1 cut(s)	1323
BsrGI	TGTACA	2 cut(s)	974, 1854
BsrI	ACTGG	2 cut(s)	272, 1794
BssAI	RCCGGY	1 cut(s)	1323
BssECI	CCNNGG	7 cut(s)	475, 706, 743, 1037, 1061, 1429, 2345
BssMI	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
BssNAI	GTATAC	1 cut(s)	264
BssNI	GRCGYC	2 cut(s)	2334, 2420
BssT1I	CCWWGG	4 cut(s)	475, 743, 1429, 2345
Bst1107I	GTATAC	1 cut(s)	264
Bst2UI	CCWGG	2 cut(s)	1038, 1062
Bst4CI	ACNGT	5 cut(s)	54, 974, 1805, 2000, 2299
Bst6I	CTCTTC	1 cut(s)	1626
BstACI	GRCGYC	2 cut(s)	2334, 2420
BstAFI	CTTAAG	2 cut(s)	953, 1225
BstAUI	TGTACA	2 cut(s)	974, 1854
BstBAI	YACGTR	3 cut(s)	980, 1382, 2365
BstC8I	GCNNGC	5 cut(s)	639, 844, 1830, 2148, 2236
BstDEI	CTNAG	6 cut(s)	683, 928, 1296, 1304, 1695, 1887
BstDSI	CCRYGG	2 cut(s)	475, 2345
BstF5I	GGATG	8 cut(s)	87, 91, 147, 1452, 1535, 1940, 2038, 2100
BstKTI	GATC	9 cut(s)	15, 427, 1489, 1663, 1683, 1701, 1720, 1764, 2127
BstMAI	GTCTC	2 cut(s)	1779, 2008
BstMBI	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
BstMWI	GCNNNNNNNGC	2 cut(s)	572, 1066
BstNI	CCWGG	2 cut(s)	1038, 1062
BstNSI	RCATGY	2 cut(s)	37, 1832
BstSCI	CCNGG	2 cut(s)	1036, 1060
BstSFI	CTRYAG	1 cut(s)	18
BstSLI	GKGCMC	1 cut(s)	1044
BstSNI	TACGTA	1 cut(s)	1382
BstV1I	GCAGC	1 cut(s)	1589
BstV2I	GAAGAC	2 cut(s)	182, 2388
BstX2I	RGATCY	2 cut(s)	1698, 1717
BstYI	RGATCY	2 cut(s)	1698, 1717
BstZ17I	GTATAC	1 cut(s)	264
BsuRI	GGCC	4 cut(s)	474, 606, 2206, 2279
BtgI	CCRYGG	2 cut(s)	475, 2345
BtrI	CACGTC	1 cut(s)	907
BtsCI	GGATG	8 cut(s)	87, 91, 147, 1452, 1535, 1940, 2038, 2100
BtsIMutI	CAGTG	5 cut(s)	279, 1110, 1665, 1810, 1895
Cac8I	GCNNGC	5 cut(s)	639, 844, 1830, 2148, 2236
Cfr10I	RCCGGY	1 cut(s)	1323
Cfr13I	GGNCC	1 cut(s)	158
CseI	GACGC	3 cut(s)	1058, 2227, 2323
Csp6I	GTAC	8 cut(s)	975, 1106, 1267, 1359, 1751, 1855, 2115, 2489
CspCI	CAANNNNNGTGG	4 cut(s)	1263, 1298, 1489, 1524
CviQI	GTAC	8 cut(s)	975, 1106, 1267, 1359, 1751, 1855, 2115, 2489
DdeI	CTNAG	6 cut(s)	683, 928, 1296, 1304, 1695, 1887
DpnI	GATC	9 cut(s)	14, 426, 1488, 1662, 1682, 1700, 1719, 1763, 2126
DpnII	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
DraI	TTTAAA	1 cut(s)	786
DrdI	GACNNNNNNGTC	1 cut(s)	1765
DriI	GACNNNNNGTC	1 cut(s)	1207
DseDI	GACNNNNNNGTC	1 cut(s)	1765
EaeI	YGGCCR	2 cut(s)	472, 604
Eam1104I	CTCTTC	1 cut(s)	1626
Eam1105I	GACNNNNNGTC	1 cut(s)	1207
EarI	CTCTTC	1 cut(s)	1626
Ecl136II	GAGCTC	1 cut(s)	1549
Eco105I	TACGTA	1 cut(s)	1382
Eco130I	CCWWGG	4 cut(s)	475, 743, 1429, 2345
Eco147I	AGGCCT	1 cut(s)	2206
Eco24I	GRGCYC	1 cut(s)	1551
Eco31I	GGTCTC	1 cut(s)	1779
Eco32I	GATATC	2 cut(s)	1840, 2354
Eco47I	GGWCC	1 cut(s)	158
Eco53kI	GAGCTC	1 cut(s)	1549
Eco57I	CTGAAG	2 cut(s)	1385, 1898
Eco72I	CACGTG	1 cut(s)	2365
EcoICRI	GAGCTC	1 cut(s)	1549
EcoRI	GAATTC	1 cut(s)	2096
EcoRII	CCWGG	2 cut(s)	1036, 1060
EcoRV	GATATC	2 cut(s)	1840, 2354
EcoT14I	CCWWGG	4 cut(s)	475, 743, 1429, 2345
EcoT22I	ATGCAT	1 cut(s)	1535
EcoT38I	GRGCYC	1 cut(s)	1551
ErhI	CCWWGG	4 cut(s)	475, 743, 1429, 2345
FalI	AAGNNNNNCTT	2 cut(s)	870, 902
FaqI	GGGAC	1 cut(s)	693
FauI	CCCGC	1 cut(s)	1833
FauNDI	CATATG	3 cut(s)	93, 568, 1243
FbaI	TGATCA	2 cut(s)	424, 1680
FblI	GTMKAC	1 cut(s)	263
Fnu4HI	GCNGC	2 cut(s)	1603, 2280
FokI	GGATG	8 cut(s)	94, 98, 154, 1459, 1542, 1947, 2025, 2087
FriOI	GRGCYC	1 cut(s)	1551
Fsp4HI	GCNGC	2 cut(s)	1603, 2280
GluI	GCNGC	2 cut(s)	1603, 2280
HaeIII	GGCC	4 cut(s)	474, 606, 2206, 2279
HapII	CCGG	1 cut(s)	1324
HgaI	GACGC	3 cut(s)	1058, 2227, 2323
Hin1I	GRCGYC	2 cut(s)	2334, 2420
HindIII	AAGCTT	3 cut(s)	573, 1568, 2429
HpaII	CCGG	1 cut(s)	1324
HphI	GGTGA	4 cut(s)	42, 914, 2386, 2482
Hpy166II	GTNNAC	4 cut(s)	264, 977, 1595, 1787
Hpy8I	GTNNAC	4 cut(s)	264, 977, 1595, 1787
Hpy99I	CGWCG	3 cut(s)	1253, 1762, 2339
HpyAV	CCTTC	5 cut(s)	514, 842, 1356, 1764, 2407
HpyCH4III	ACNGT	5 cut(s)	54, 974, 1805, 2000, 2299
HpyCH4IV	ACGT	5 cut(s)	906, 979, 1381, 2364, 2420
HpyCH4V	TGCA	9 cut(s)	374, 452, 991, 1006, 1533, 1739, 1876, 1938, 2150
HpyF10VI	GCNNNNNNNGC	2 cut(s)	572, 1066
HpyF3I	CTNAG	6 cut(s)	683, 928, 1296, 1304, 1695, 1887
HpySE526I	ACGT	5 cut(s)	906, 979, 1381, 2364, 2420
Hsp92I	GRCGYC	2 cut(s)	2334, 2420
KpnI	GGTACC	1 cut(s)	1754
Ksp22I	TGATCA	2 cut(s)	424, 1680
Kzo9I	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
LguI	GCTCTTC	1 cut(s)	1626
LmnI	GCTCC	5 cut(s)	352, 634, 1320, 1546, 1554
Lsp1109I	GCAGC	1 cut(s)	1589
LweI	GCATC	8 cut(s)	76, 433, 754, 790, 978, 1075, 1520, 1925
MaeII	ACGT	5 cut(s)	906, 979, 1381, 2364, 2420
MaeIII	GTNAC	6 cut(s)	306, 649, 794, 1948, 1990, 2416
MalI	GATC	9 cut(s)	14, 426, 1488, 1662, 1682, 1700, 1719, 1763, 2126
MboI	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
MflI	RGATCY	2 cut(s)	1698, 1717
MhlI	GDGCHC	2 cut(s)	1044, 1551
MlsI	TGGCCA	2 cut(s)	474, 606
MluNI	TGGCCA	2 cut(s)	474, 606
MlyI	GAGTC	4 cut(s)	119, 201, 1469, 2012
MmeI	TCCRAC	3 cut(s)	464, 1649, 2448
Mox20I	TGGCCA	2 cut(s)	474, 606
Mph1103I	ATGCAT	1 cut(s)	1535
MscI	TGGCCA	2 cut(s)	474, 606
Msp20I	TGGCCA	2 cut(s)	474, 606
MspA1I	CMGCKG	1 cut(s)	2282
MspCI	CTTAAG	2 cut(s)	953, 1225
MspI	CCGG	1 cut(s)	1324
MspR9I	CCNGG	2 cut(s)	1038, 1062
MvaI	CCWGG	2 cut(s)	1038, 1062
MwoI	GCNNNNNNNGC	2 cut(s)	572, 1066
NcoI	CCATGG	2 cut(s)	475, 2345
NdeI	CATATG	3 cut(s)	93, 568, 1243
NdeII	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
NlaIV	GGNNCC	5 cut(s)	159, 697, 1043, 1322, 1752
NmeAIII	GCCGAG	1 cut(s)	958
NmuCI	GTSAC	1 cut(s)	2416
NsiI	ATGCAT	1 cut(s)	1535
NspI	RCATGY	2 cut(s)	37, 1832
PaeI	GCATGC	1 cut(s)	1832
PceI	AGGCCT	1 cut(s)	2206
PciSI	GCTCTTC	1 cut(s)	1626
PfeI	GAWTC	9 cut(s)	107, 301, 531, 754, 1230, 1643, 1970, 2197, 2310
PkrI	GCNGC	2 cut(s)	1604, 2281
PleI	GAGTC	4 cut(s)	119, 200, 1468, 2011
PmaCI	CACGTG	1 cut(s)	2365
PmlI	CACGTG	1 cut(s)	2365
PpsI	GAGTC	4 cut(s)	119, 200, 1468, 2011
Ppu21I	YACGTR	3 cut(s)	980, 1382, 2365
PshBI	ATTAAT	1 cut(s)	1310
Psp124BI	GAGCTC	1 cut(s)	1551
Psp6I	CCWGG	2 cut(s)	1036, 1060
PspCI	CACGTG	1 cut(s)	2365
PspGI	CCWGG	2 cut(s)	1036, 1060
PspN4I	GGNNCC	5 cut(s)	159, 697, 1043, 1322, 1752
PspPI	GGNCC	1 cut(s)	158
PsuI	RGATCY	2 cut(s)	1698, 1717
RsaI	GTAC	8 cut(s)	976, 1107, 1268, 1360, 1752, 1856, 2116, 2490
RsaNI	GTAC	8 cut(s)	975, 1106, 1267, 1359, 1751, 1855, 2115, 2489
SacI	GAGCTC	1 cut(s)	1551
SapI	GCTCTTC	1 cut(s)	1626
SatI	GCNGC	2 cut(s)	1603, 2280
Sau3AI	GATC	9 cut(s)	12, 424, 1486, 1660, 1680, 1698, 1717, 1761, 2124
Sau96I	GGNCC	1 cut(s)	158
ScaI	AGTACT	2 cut(s)	1107, 2490
SchI	GAGTC	4 cut(s)	119, 201, 1469, 2012
ScrFI	CCNGG	2 cut(s)	1038, 1062
SduI	GDGCHC	2 cut(s)	1044, 1551
SfaNI	GCATC	8 cut(s)	76, 433, 754, 790, 978, 1075, 1520, 1925
SfcI	CTRYAG	1 cut(s)	18
SinI	GGWCC	1 cut(s)	158
SmlI	CTYRAG	5 cut(s)	953, 1225, 1439, 1721, 1814
SmoI	CTYRAG	5 cut(s)	953, 1225, 1439, 1721, 1814
SnaBI	TACGTA	1 cut(s)	1382
SpeI	ACTAGT	3 cut(s)	1000, 1984, 2108
SphI	GCATGC	1 cut(s)	1832
SseBI	AGGCCT	1 cut(s)	2206
SsiI	CCGC	3 cut(s)	1826, 2280, 2468
SspI	AATATT	1 cut(s)	1514
SstI	GAGCTC	1 cut(s)	1551
StuI	AGGCCT	1 cut(s)	2206
StyD4I	CCNGG	2 cut(s)	1036, 1060
StyI	CCWWGG	4 cut(s)	475, 743, 1429, 2345
TaaI	ACNGT	5 cut(s)	54, 974, 1805, 2000, 2299
TaiI	ACGT	5 cut(s)	909, 982, 1384, 2367, 2423
TaqI	TCGA	8 cut(s)	414, 630, 1374, 1463, 1650, 1757, 2337, 2445
TaqII	GACCGA	1 cut(s)	20
TatI	WGTACW	5 cut(s)	974, 1105, 1266, 1854, 2488
TauI	GCSGC	1 cut(s)	2282
TfiI	GAWTC	9 cut(s)	107, 301, 531, 754, 1230, 1643, 1970, 2197, 2310
TscAI	CASTG	5 cut(s)	279, 1117, 1672, 1810, 1895
TseFI	GTSAC	1 cut(s)	2416
TseI	GCWGC	1 cut(s)	1602
Tsp45I	GTSAC	1 cut(s)	2416
TspDTI	ATGAA	9 cut(s)	110, 147, 226, 347, 585, 824, 1400, 2089, 2100
TspGWI	ACGGA	2 cut(s)	150, 1218
TspRI	CASTG	5 cut(s)	279, 1117, 1672, 1810, 1895
Vha464I	CTTAAG	2 cut(s)	953, 1225
VpaK11BI	GGWCC	1 cut(s)	158
VspI	ATTAAT	1 cut(s)	1310
XapI	RAATTY	5 cut(s)	217, 1220, 1688, 1881, 2096
XceI	RCATGY	2 cut(s)	37, 1832
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1636
XmiI	GTMKAC	1 cut(s)	263
ZraI	GACGTC	1 cut(s)	2421
ZrmI	AGTACT	2 cut(s)	1107, 2490
Zsp2I	ATGCAT	1 cut(s)	1535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.