Disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 56 - 233 | 1.6e-60 | TIR domain |
| TIR_2 | PF13676 | 59 - 153 | 5.2e-10 | TIR domain |
| NB-ARC | PF00931 | 235 - 409 | 5e-14 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 478 - 547 | 1.5e-13 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 657 - 676 | 1.9e-07 | Leucine Rich Repeat |
| C-JID | PF20160 | 936 - 1056 | 2.2e-07 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 526 |
| AccB1I | GGYRCC | 1 cut(s) | 378 |
| AccII | CGCG | 1 cut(s) | 2405 |
| AccIII | TCCGGA | 1 cut(s) | 2641 |
| AciI | CCGC | 7 cut(s) | 569, 1877, 1990, 2257, 2501, 3062, 3092 |
| AclWI | GGATC | 2 cut(s) | 334, 2444 |
| AcsI | RAATTY | 4 cut(s) | 630, 1228, 1832, 2053 |
| AcuI | CTGAAG | 2 cut(s) | 1452, 2063 |
| AfaI | GTAC | 9 cut(s) | 64, 993, 1210, 1719, 1871, 1963, 1970, 2962, 3168 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1241 |
| AflII | CTTAAG | 1 cut(s) | 1837 |
| AjnI | CCWGG | 2 cut(s) | 1093, 2619 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3098, 3130 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 186, 218 |
| Alw21I | GWGCWC | 2 cut(s) | 309, 2210 |
| Alw26I | GTCTC | 4 cut(s) | 959, 1845, 2454, 2585 |
| Alw44I | GTGCAC | 1 cut(s) | 2206 |
| AlwI | GGATC | 2 cut(s) | 334, 2444 |
| Ama87I | CYCGRG | 1 cut(s) | 2065 |
| Aor13HI | TCCGGA | 1 cut(s) | 2641 |
| AoxI | GGCC | 1 cut(s) | 2952 |
| ApaLI | GTGCAC | 1 cut(s) | 2206 |
| ApeKI | GCWGC | 1 cut(s) | 2224 |
| ApoI | RAATTY | 4 cut(s) | 630, 1228, 1832, 2053 |
| AseI | ATTAAT | 2 cut(s) | 1913, 2418 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 500, 1194 |
| AspS9I | GGNCC | 3 cut(s) | 299, 776, 1091 |
| AsuC2I | CCSGG | 1 cut(s) | 2811 |
| AsuHPI | GGTGA | 4 cut(s) | 660, 1295, 1532, 3160 |
| AsuII | TTCGAA | 2 cut(s) | 504, 3126 |
| AvaI | CYCGRG | 1 cut(s) | 2065 |
| AvaII | GGWCC | 3 cut(s) | 299, 776, 1091 |
| BaeGI | GKGCMC | 1 cut(s) | 2210 |
| BanI | GGYRCC | 1 cut(s) | 378 |
| BanII | GRGCYC | 2 cut(s) | 309, 1316 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1397, 1429 |
| BbsI | GAAGAC | 4 cut(s) | 493, 800, 2447, 2821 |
| Bbv12I | GWGCWC | 2 cut(s) | 309, 2210 |
| BbvI | GCAGC | 1 cut(s) | 2211 |
| BccI | CCATC | 8 cut(s) | 108, 157, 557, 694, 1186, 1235, 1721, 2525 |
| BceAI | ACGGC | 2 cut(s) | 2413, 3052 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 893, 927 |
| BciT130I | CCWGG | 2 cut(s) | 1095, 2621 |
| BclI | TGATCA | 1 cut(s) | 1042 |
| BcnI | CCSGG | 1 cut(s) | 2811 |
| BcoDI | GTCTC | 4 cut(s) | 959, 1845, 2454, 2585 |
| BfaI | CTAG | 9 cut(s) | 21, 1058, 1613, 1973, 2130, 2211, 2288, 2603, 2684 |
| BfmI | CTRYAG | 2 cut(s) | 33, 2235 |
| BfrI | CTTAAG | 1 cut(s) | 1837 |
| BfuAI | ACCTGC | 1 cut(s) | 526 |
| BglII | AGATCT | 1 cut(s) | 3026 |
| BisI | GCNGC | 2 cut(s) | 570, 2225 |
| BlsI | GCNGC | 2 cut(s) | 571, 2226 |
| BmcAI | AGTACT | 2 cut(s) | 1719, 3168 |
| Bme1390I | CCNGG | 3 cut(s) | 1095, 2621, 2811 |
| Bme18I | GGWCC | 3 cut(s) | 299, 776, 1091 |
| BmeT110I | CYCGRG | 1 cut(s) | 2065 |
| BmgT120I | GGNCC | 3 cut(s) | 299, 776, 1091 |
| BmiI | GGNNCC | 4 cut(s) | 380, 777, 1315, 2857 |
| BmrFI | CCNGG | 3 cut(s) | 1095, 2621, 2811 |
| BmsI | GCATC | 9 cut(s) | 867, 1051, 1372, 1408, 1513, 2123, 2267, 2401, 2600 |
| BpiI | GAAGAC | 4 cut(s) | 493, 800, 2447, 2821 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2213, 2245 |
| BpmI | CTGGAG | 4 cut(s) | 603, 1157, 2122, 2871 |
| Bpu10I | CCTNAGC | 1 cut(s) | 303 |
| Bpu14I | TTCGAA | 2 cut(s) | 504, 3126 |
| BpuEI | CTTGAG | 5 cut(s) | 658, 2024, 2204, 2474, 2609 |
| BpuMI | CCSGG | 1 cut(s) | 2811 |
| BsaAI | YACGTR | 1 cut(s) | 1212 |
| BsaBI | GATNNNNATC | 4 cut(s) | 338, 423, 1109, 2121 |
| BsaI | GGTCTC | 3 cut(s) | 959, 1845, 2454 |
| BsaJI | CCNNGG | 6 cut(s) | 190, 1094, 1361, 2561, 2898, 3020 |
| BsaWI | WCCGGW | 1 cut(s) | 2641 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 186, 216, 2844, 2874 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1241 |
| Bse1I | ACTGG | 4 cut(s) | 890, 934, 2784, 2854 |
| Bse3DI | GCAATG | 1 cut(s) | 801 |
| Bse8I | GATNNNNATC | 4 cut(s) | 338, 423, 1109, 2121 |
| BseAI | TCCGGA | 1 cut(s) | 2641 |
| BseBI | CCWGG | 2 cut(s) | 1095, 2621 |
| BseDI | CCNNGG | 6 cut(s) | 190, 1094, 1361, 2561, 2898, 3020 |
| BseJI | GATNNNNATC | 4 cut(s) | 338, 423, 1109, 2121 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1241 |
| BseMI | GCAATG | 1 cut(s) | 801 |
| BseMII | CTCAG | 4 cut(s) | 294, 1542, 1838, 2410 |
| BseNI | ACTGG | 4 cut(s) | 890, 934, 2784, 2854 |
| BseRI | GAGGAG | 2 cut(s) | 545, 2221 |
| BseSI | GKGCMC | 1 cut(s) | 2210 |
| BseXI | GCAGC | 1 cut(s) | 2211 |
| BsgI | GTGCAG | 1 cut(s) | 3015 |
| Bsh1236I | CGCG | 1 cut(s) | 2405 |
| BshFI | GGCC | 1 cut(s) | 2954 |
| BshNI | GGYRCC | 1 cut(s) | 378 |
| BsiHKAI | GWGCWC | 2 cut(s) | 309, 2210 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2065 |
| BsiSI | CCGG | 3 cut(s) | 1649, 2642, 2811 |
| BslFI | GGGAC | 3 cut(s) | 145, 1311, 1937 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1241 |
| BsmAI | GTCTC | 4 cut(s) | 959, 1845, 2454, 2585 |
| BsmBI | CGTCTC | 1 cut(s) | 2585 |
| BsmFI | GGGAC | 3 cut(s) | 145, 1311, 1937 |
| BsnI | GGCC | 1 cut(s) | 2954 |
| Bso31I | GGTCTC | 3 cut(s) | 959, 1845, 2454 |
| BsoBI | CYCGRG | 1 cut(s) | 2065 |
| Bsp119I | TTCGAA | 2 cut(s) | 504, 3126 |
| Bsp1286I | GDGCHC | 3 cut(s) | 309, 1316, 2210 |
| Bsp13I | TCCGGA | 1 cut(s) | 2641 |
| Bsp1407I | TGTACA | 1 cut(s) | 1961 |
| Bsp143I | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| Bsp19I | CCATGG | 1 cut(s) | 3020 |
| Bsp68I | TCGCGA | 1 cut(s) | 2405 |
| BspACI | CCGC | 7 cut(s) | 569, 1877, 1990, 2257, 2501, 3062, 3092 |
| BspANI | GGCC | 1 cut(s) | 2954 |
| BspCNI | CTCAG | 4 cut(s) | 295, 1543, 1839, 2409 |
| BspEI | TCCGGA | 1 cut(s) | 2641 |
| BspFNI | CGCG | 1 cut(s) | 2405 |
| BspLI | GGNNCC | 4 cut(s) | 380, 777, 1315, 2857 |
| BspMI | ACCTGC | 1 cut(s) | 526 |
| BspPI | GGATC | 2 cut(s) | 334, 2444 |
| BspQI | GCTCTTC | 1 cut(s) | 141 |
| BspT104I | TTCGAA | 2 cut(s) | 504, 3126 |
| BspT107I | GGYRCC | 1 cut(s) | 378 |
| BspTI | CTTAAG | 1 cut(s) | 1837 |
| BspTNI | GGTCTC | 3 cut(s) | 959, 1845, 2454 |
| BsrDI | GCAATG | 1 cut(s) | 801 |
| BsrGI | TGTACA | 1 cut(s) | 1961 |
| BsrI | ACTGG | 4 cut(s) | 890, 934, 2784, 2854 |
| BssECI | CCNNGG | 6 cut(s) | 190, 1094, 1361, 2561, 2898, 3020 |
| BssMI | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| BssT1I | CCWWGG | 3 cut(s) | 1361, 2898, 3020 |
| Bst2UI | CCWGG | 2 cut(s) | 1095, 2621 |
| Bst4CI | ACNGT | 5 cut(s) | 433, 824, 911, 2355, 3137 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstAFI | CTTAAG | 1 cut(s) | 1837 |
| BstAUI | TGTACA | 1 cut(s) | 1961 |
| BstBAI | YACGTR | 1 cut(s) | 1212 |
| BstBI | TTCGAA | 2 cut(s) | 504, 3126 |
| BstC8I | GCNNGC | 4 cut(s) | 616, 1257, 1462, 2505 |
| BstDSI | CCRYGG | 2 cut(s) | 190, 3020 |
| BstEII | GGTNACC | 1 cut(s) | 2036 |
| BstFNI | CGCG | 1 cut(s) | 2405 |
| BstKTI | GATC | 9 cut(s) | 329, 336, 402, 1045, 1570, 2092, 2439, 2805, 3029 |
| BstMAI | GTCTC | 4 cut(s) | 959, 1845, 2454, 2585 |
| BstMBI | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 578, 1600, 1678, 2411 |
| BstNI | CCWGG | 2 cut(s) | 1095, 2621 |
| BstNSI | RCATGY | 2 cut(s) | 229, 1464 |
| BstPI | GGTNACC | 1 cut(s) | 2036 |
| BstSCI | CCNGG | 3 cut(s) | 1093, 2619, 2809 |
| BstSFI | CTRYAG | 2 cut(s) | 33, 2235 |
| BstSLI | GKGCMC | 1 cut(s) | 2210 |
| BstSNI | TACGTA | 1 cut(s) | 1212 |
| BstUI | CGCG | 1 cut(s) | 2405 |
| BstV1I | GCAGC | 1 cut(s) | 2211 |
| BstV2I | GAAGAC | 4 cut(s) | 493, 800, 2447, 2821 |
| BstX2I | RGATCY | 1 cut(s) | 3026 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2146 |
| BstYI | RGATCY | 1 cut(s) | 3026 |
| BsuRI | GGCC | 1 cut(s) | 2954 |
| BtgI | CCRYGG | 2 cut(s) | 190, 3020 |
| BtsIMutI | CAGTG | 5 cut(s) | 438, 897, 916, 2340, 2351 |
| BtuMI | TCGCGA | 1 cut(s) | 2405 |
| BveI | ACCTGC | 1 cut(s) | 526 |
| Cac8I | GCNNGC | 4 cut(s) | 616, 1257, 1462, 2505 |
| Cfr13I | GGNCC | 3 cut(s) | 299, 776, 1091 |
| CseI | GACGC | 2 cut(s) | 1670, 2602 |
| CsiI | ACCWGGT | 1 cut(s) | 2619 |
| Csp6I | GTAC | 9 cut(s) | 63, 992, 1209, 1718, 1870, 1962, 1969, 2961, 3167 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 873, 908, 2164, 2199 |
| CviQI | GTAC | 9 cut(s) | 63, 992, 1209, 1718, 1870, 1962, 1969, 2961, 3167 |
| DpnI | GATC | 9 cut(s) | 328, 335, 401, 1044, 1569, 2091, 2438, 2804, 3028 |
| DpnII | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| DraI | TTTAAA | 1 cut(s) | 1887 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| EciI | GGCGGA | 1 cut(s) | 3077 |
| Ecl136II | GAGCTC | 1 cut(s) | 307 |
| Eco105I | TACGTA | 1 cut(s) | 1212 |
| Eco130I | CCWWGG | 3 cut(s) | 1361, 2898, 3020 |
| Eco24I | GRGCYC | 2 cut(s) | 309, 1316 |
| Eco31I | GGTCTC | 3 cut(s) | 959, 1845, 2454 |
| Eco32I | GATATC | 3 cut(s) | 277, 2338, 2374 |
| Eco47I | GGWCC | 3 cut(s) | 299, 776, 1091 |
| Eco53kI | GAGCTC | 1 cut(s) | 307 |
| Eco57I | CTGAAG | 2 cut(s) | 1452, 2063 |
| Eco88I | CYCGRG | 1 cut(s) | 2065 |
| Eco91I | GGTNACC | 1 cut(s) | 2036 |
| EcoICRI | GAGCTC | 1 cut(s) | 307 |
| EcoO109I | RGGNCCY | 1 cut(s) | 776 |
| EcoO65I | GGTNACC | 1 cut(s) | 2036 |
| EcoRII | CCWGG | 2 cut(s) | 1093, 2619 |
| EcoRV | GATATC | 3 cut(s) | 277, 2338, 2374 |
| EcoT14I | CCWWGG | 3 cut(s) | 1361, 2898, 3020 |
| EcoT22I | ATGCAT | 2 cut(s) | 882, 1605 |
| EcoT38I | GRGCYC | 2 cut(s) | 309, 1316 |
| ErhI | CCWWGG | 3 cut(s) | 1361, 2898, 3020 |
| Esp3I | CGTCTC | 1 cut(s) | 2585 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 908, 940, 1488, 1520, 1856, 1888, 1933, 1965 |
| FaqI | GGGAC | 3 cut(s) | 145, 1311, 1937 |
| FauI | CCCGC | 1 cut(s) | 2250 |
| FauNDI | CATATG | 2 cut(s) | 711, 1986 |
| FbaI | TGATCA | 1 cut(s) | 1042 |
| Fnu4HI | GCNGC | 2 cut(s) | 570, 2225 |
| FriOI | GRGCYC | 2 cut(s) | 309, 1316 |
| Fsp4HI | GCNGC | 2 cut(s) | 570, 2225 |
| FspBI | CTAG | 9 cut(s) | 21, 1058, 1613, 1973, 2130, 2211, 2288, 2603, 2684 |
| GluI | GCNGC | 2 cut(s) | 570, 2225 |
| GsuI | CTGGAG | 4 cut(s) | 603, 1157, 2122, 2871 |
| HaeIII | GGCC | 1 cut(s) | 2954 |
| HapII | CCGG | 3 cut(s) | 1649, 2642, 2811 |
| HgaI | GACGC | 2 cut(s) | 1670, 2602 |
| HincII | GTYRAC | 5 cut(s) | 457, 1582, 1978, 2740, 3133 |
| HindII | GTYRAC | 5 cut(s) | 457, 1582, 1978, 2740, 3133 |
| HindIII | AAGCTT | 2 cut(s) | 1191, 1253 |
| HpaI | GTTAAC | 2 cut(s) | 1582, 2740 |
| HpaII | CCGG | 3 cut(s) | 1649, 2642, 2811 |
| HphI | GGTGA | 4 cut(s) | 660, 1295, 1532, 3160 |
| Hpy166II | GTNNAC | 7 cut(s) | 457, 1286, 1582, 1978, 2208, 2740, 3133 |
| Hpy188I | TCNGA | 8 cut(s) | 183, 323, 901, 946, 1104, 1325, 1848, 1935 |
| Hpy8I | GTNNAC | 7 cut(s) | 457, 1286, 1582, 1978, 2208, 2740, 3133 |
| Hpy99I | CGWCG | 2 cut(s) | 314, 2434 |
| HpyCH4III | ACNGT | 5 cut(s) | 433, 824, 911, 2355, 3137 |
| HpyCH4IV | ACGT | 4 cut(s) | 642, 1211, 1967, 2963 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 578, 1600, 1678, 2411 |
| HpySE526I | ACGT | 4 cut(s) | 642, 1211, 1967, 2963 |
| Kpn2I | TCCGGA | 1 cut(s) | 2641 |
| Ksp22I | TGATCA | 1 cut(s) | 1042 |
| KspAI | GTTAAC | 2 cut(s) | 1582, 2740 |
| Kzo9I | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| LguI | GCTCTTC | 1 cut(s) | 141 |
| LmnI | GCTCC | 8 cut(s) | 194, 285, 532, 1319, 2080, 2141, 2221, 3064 |
| Lsp1109I | GCAGC | 1 cut(s) | 2211 |
| LweI | GCATC | 9 cut(s) | 867, 1051, 1372, 1408, 1513, 2123, 2267, 2401, 2600 |
| MabI | ACCWGGT | 1 cut(s) | 2619 |
| MaeI | CTAG | 9 cut(s) | 21, 1058, 1613, 1973, 2130, 2211, 2288, 2603, 2684 |
| MaeII | ACGT | 4 cut(s) | 642, 1211, 1967, 2963 |
| MaeIII | GTNAC | 8 cut(s) | 1267, 1412, 2036, 2060, 2459, 2623, 2679, 3137 |
| MalI | GATC | 9 cut(s) | 328, 335, 401, 1044, 1569, 2091, 2438, 2804, 3028 |
| MboI | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| MfeI | CAATTG | 1 cut(s) | 1619 |
| MflI | RGATCY | 1 cut(s) | 3026 |
| MhlI | GDGCHC | 3 cut(s) | 309, 1316, 2210 |
| MlyI | GAGTC | 4 cut(s) | 819, 1108, 1366, 2687 |
| MmeI | TCCRAC | 2 cut(s) | 164, 1082 |
| Mph1103I | ATGCAT | 2 cut(s) | 882, 1605 |
| MroI | TCCGGA | 1 cut(s) | 2641 |
| MroXI | GAANNNNTTC | 2 cut(s) | 500, 1194 |
| MslI | CAYNNNNRTG | 3 cut(s) | 376, 747, 2522 |
| MspCI | CTTAAG | 1 cut(s) | 1837 |
| MspI | CCGG | 3 cut(s) | 1649, 2642, 2811 |
| MspR9I | CCNGG | 3 cut(s) | 1095, 2621, 2811 |
| MunI | CAATTG | 1 cut(s) | 1619 |
| MvaI | CCWGG | 2 cut(s) | 1095, 2621 |
| MvnI | CGCG | 1 cut(s) | 2405 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 578, 1600, 1678, 2411 |
| NciI | CCSGG | 1 cut(s) | 2811 |
| NcoI | CCATGG | 1 cut(s) | 3020 |
| NdeI | CATATG | 2 cut(s) | 711, 1986 |
| NdeII | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| NlaIV | GGNNCC | 4 cut(s) | 380, 777, 1315, 2857 |
| NmuCI | GTSAC | 1 cut(s) | 2679 |
| NruI | TCGCGA | 1 cut(s) | 2405 |
| NsiI | ATGCAT | 2 cut(s) | 882, 1605 |
| NspI | RCATGY | 2 cut(s) | 229, 1464 |
| NspV | TTCGAA | 2 cut(s) | 504, 3126 |
| PaeI | GCATGC | 1 cut(s) | 1464 |
| PaeR7I | CTCGAG | 1 cut(s) | 2065 |
| PciSI | GCTCTTC | 1 cut(s) | 141 |
| PdmI | GAANNNNTTC | 2 cut(s) | 500, 1194 |
| PkrI | GCNGC | 2 cut(s) | 571, 2226 |
| PleI | GAGTC | 4 cut(s) | 818, 1107, 1366, 2686 |
| PpsI | GAGTC | 4 cut(s) | 818, 1107, 1366, 2686 |
| Ppu21I | YACGTR | 1 cut(s) | 1212 |
| PpuMI | RGGWCCY | 1 cut(s) | 776 |
| PshBI | ATTAAT | 2 cut(s) | 1913, 2418 |
| Psp124BI | GAGCTC | 1 cut(s) | 309 |
| Psp5II | RGGWCCY | 1 cut(s) | 776 |
| Psp6I | CCWGG | 2 cut(s) | 1093, 2619 |
| PspEI | GGTNACC | 1 cut(s) | 2036 |
| PspGI | CCWGG | 2 cut(s) | 1093, 2619 |
| PspN4I | GGNNCC | 4 cut(s) | 380, 777, 1315, 2857 |
| PspPI | GGNCC | 3 cut(s) | 299, 776, 1091 |
| PspPPI | RGGWCCY | 1 cut(s) | 776 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2782, 2814 |
| PsuI | RGATCY | 1 cut(s) | 3026 |
| RruI | TCGCGA | 1 cut(s) | 2405 |
| RsaI | GTAC | 9 cut(s) | 64, 993, 1210, 1719, 1871, 1963, 1970, 2962, 3168 |
| RsaNI | GTAC | 9 cut(s) | 63, 992, 1209, 1718, 1870, 1962, 1969, 2961, 3167 |
| RseI | CAYNNNNRTG | 3 cut(s) | 376, 747, 2522 |
| SacI | GAGCTC | 1 cut(s) | 309 |
| SapI | GCTCTTC | 1 cut(s) | 141 |
| SatI | GCNGC | 2 cut(s) | 570, 2225 |
| Sau3AI | GATC | 9 cut(s) | 326, 333, 399, 1042, 1567, 2089, 2436, 2802, 3026 |
| Sau96I | GGNCC | 3 cut(s) | 299, 776, 1091 |
| ScaI | AGTACT | 2 cut(s) | 1719, 3168 |
| SchI | GAGTC | 4 cut(s) | 819, 1108, 1366, 2687 |
| ScrFI | CCNGG | 3 cut(s) | 1095, 2621, 2811 |
| SduI | GDGCHC | 3 cut(s) | 309, 1316, 2210 |
| SexAI | ACCWGGT | 1 cut(s) | 2619 |
| SfaNI | GCATC | 9 cut(s) | 867, 1051, 1372, 1408, 1513, 2123, 2267, 2401, 2600 |
| SfcI | CTRYAG | 2 cut(s) | 33, 2235 |
| Sfr274I | CTCGAG | 1 cut(s) | 2065 |
| SfuI | TTCGAA | 2 cut(s) | 504, 3126 |
| SinI | GGWCC | 3 cut(s) | 299, 776, 1091 |
| SlaI | CTCGAG | 1 cut(s) | 2065 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 376, 747, 2522 |
| SmlI | CTYRAG | 7 cut(s) | 673, 1837, 2003, 2065, 2183, 2489, 2588 |
| SmoI | CTYRAG | 7 cut(s) | 673, 1837, 2003, 2065, 2183, 2489, 2588 |
| SnaBI | TACGTA | 1 cut(s) | 1212 |
| SphI | GCATGC | 1 cut(s) | 1464 |
| SsiI | CCGC | 7 cut(s) | 569, 1877, 1990, 2257, 2501, 3062, 3092 |
| SspI | AATATT | 3 cut(s) | 865, 1159, 1390 |
| SspMI | CTAG | 9 cut(s) | 21, 1058, 1613, 1973, 2130, 2211, 2288, 2603, 2684 |
| SstI | GAGCTC | 1 cut(s) | 309 |
| StyD4I | CCNGG | 3 cut(s) | 1093, 2619, 2809 |
| StyI | CCWWGG | 3 cut(s) | 1361, 2898, 3020 |
| TaaI | ACNGT | 5 cut(s) | 433, 824, 911, 2355, 3137 |
| TaiI | ACGT | 4 cut(s) | 645, 1214, 1970, 2966 |
| TaqII | GACCGA | 2 cut(s) | 1079, 1869 |
| TatI | WGTACW | 4 cut(s) | 1717, 1869, 1961, 3166 |
| TauI | GCSGC | 1 cut(s) | 572 |
| TscAI | CASTG | 5 cut(s) | 438, 897, 916, 2347, 2358 |
| TseFI | GTSAC | 1 cut(s) | 2679 |
| TseI | GCWGC | 1 cut(s) | 2224 |
| Tsp45I | GTSAC | 1 cut(s) | 2679 |
| TspGWI | ACGGA | 4 cut(s) | 207, 1628, 1655, 2848 |
| TspRI | CASTG | 5 cut(s) | 438, 897, 916, 2347, 2358 |
| Vha464I | CTTAAG | 1 cut(s) | 1837 |
| VneI | GTGCAC | 1 cut(s) | 2206 |
| VpaK11BI | GGWCC | 3 cut(s) | 299, 776, 1091 |
| VspI | ATTAAT | 2 cut(s) | 1913, 2418 |
| XapI | RAATTY | 4 cut(s) | 630, 1228, 1832, 2053 |
| XceI | RCATGY | 2 cut(s) | 229, 1464 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2311 |
| XhoI | CTCGAG | 1 cut(s) | 2065 |
| XmnI | GAANNNNTTC | 2 cut(s) | 500, 1194 |
| XspI | CTAG | 9 cut(s) | 21, 1058, 1613, 1973, 2130, 2211, 2288, 2603, 2684 |
| ZrmI | AGTACT | 2 cut(s) | 1719, 3168 |
| Zsp2I | ATGCAT | 2 cut(s) | 882, 1605 |