AT3G04220

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0001639
Physical Location & Seq
Reverse (-)
1108725 .. 1112437
3713 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G04220.1

Sequence Viewer

Length: 2604 bp
ATGGATTCTTCTTTTTTACTCGAAACTGTTGCTGCTGCAACAGGCTTCTTCACACTTTTGGGTACAATACTTTTTATGGTTTACAGAAAATTCAAAGACCATCGAGAAAACAAAGAAAATGATTCTTCTTCTTCAACACAACCGTCTCCTTCACCACCTCTGTCGTCTTTATCTCTCACGCGAAAATACGATGTCTTTCCAAGCTTCCGCGGGGAAGATGTCCGCAAAGACTTCCTCAGTCACATTCAGAAGGAGTTTCAAAGACAAGGAATCACACCATTTGTTGATAACAATATCAAGAGAGGAGAATCTATCGGTCCAGAACTCATTCGGGCGATTAGAGGGTCCAAGATCGCAATCATCTTGCTCTCCAAGAACTACGCTTCTTCAAGCTGGTGCTTAGACGAATTGGTGGAGATCATAAAGTGCAAGGAAGAAATGGGTCAAACAGTGATAGTCATTTTCTACAAAGTGGATCCATCTCTTGTAAAGAAGCTGACCGGTGATTTCGGGAAGGTATTCAGAAACACTTGTAAGGGTAAAGAAAGAGAAAACATTGAAAGATGGAGAGAAGCTTTCAAAAAAGTAGCAACAATAGCTGGTTACGATTCAAGAAAATGGGATAACGAATCGGGCATGATCGAAAAAATAGTCAGTGATATTTCGGAAATGCTGAATCATTCGACGCCGTCACGTGATTTTGACGATTTGATTGGGATGGGAGATCACATGGAAAAGATGAAACCATTGTTAGACATAGACTCAGATGAAATGAAGACGATAGGAATATGGGGTCCTCCTGGGGTTGGCAAAACCACCATTGCTAGATCTTTATATAATCAACACTCGGACAAATTTCAACTGAGTGTCTTTATGGAGAGTATCAAAACCGCGTACACAATACCAGCGTGTTCCGATGACTACTATGAAAAGTTGCAACTACAACAACGGTTTCTGTCTCAAATAACCAACCAGGAAAATGTCCAGATCCCACATTTAGGAGTTGCACAAGAAAGGTTGAACGACAAGAAAGTTCTTGTTGTTATTGATGATGTGAATCAGTCAGTACAAGTAGATGCCTTGGCGAAAGAAAATGATTGGCTAGGTCCTGGGAGTCGGATTATCATCACAACCCAAGACCGAGGAATTTTGAGGGCGCATGGGATCGAACATATTTACGAGGTGGATTATCCCAACTATGAAGAGGCCCTTCAAATCTTTTGCATGCATGCTTTTGGTCAAAAGTCCCCATATGATGGTTTTGAGGAGCTTGCTCAACAAGTTACAACACTTTCGGGTAGACTTCCTTTGGGACTTAAGGTTATGGGATCCTATTTCCGGGGAATGACCAAGCAGGAGTGGACAATGGCACTACCAAGGGTAAGGACTCACCTTGACGGAAAAATTGAGAGCATTCTAAAACTCAGTTACGATGCCTTATGTGATGTAGATAAAAGTTTGTTCCTTCATCTAGCTTGCTCTTTCCACAATGATGATACCGAGTTAGTAGAACAGCAGCTTGGAAAGAAGTTCTCGGATTTGAGGCAAGGGCTTCACGTCTTAGCTGAGAAATCGCTTATACATATGGATTTAAGACTGATACGTATGCATGTTCTGCTGGCACAACTTGGTAGAGAAATTGTTCGTAAACAATCCATTCATGAGCCTGGACAACGTCAATTTTTGGTTGATGCAACAGATATTCGTGAAGTACTCACTGATGATACAGGCAGTAGAAGTGTAATAGGCATAGATTTCGACTTCAATACGATGGAGAAAGAATTAGATATAAGTGAGAAAGCCTTCCGAGGAATGTCTAATCTTCAGTTCATAAGAATTTATGGTGACCTTTTTAGCCGTCACGGAGTATACTATTTTGGCGGTCGCGGTCACCGCGTGTCTCTGGATTATGATAGTAAATTGCACTTCCCGCGAGGTCTGGACTATTTACCTGGAAAACTTAGCAAGCTTGAGAAGTTGTGGGAAGGAATTCAACCGCTTAGAAATCTCGAGTGGCTGGATTTGACTTGTTCCAGAAATCTGAAGGAGCTTCCTGATCTTTCAACAGCCACTAATCTCCAAAGACTGTCCATTGAGCGTTGCTCAAGTTTGGTGAAGCTCCCTTCCTCTATTGGGGAAGCCACTAATCTCAAGAAAATAAACTTGAGAGAGTGCTTATCTCTGGTGGAATTACCCTCCTCATTTGGGAATCTTACTAATCTCCAAGAATTGGATCTTAGAGAATGCTCAAGTCTAGTGGAGCTCCCAACCTCGTTTGGGAATCTTGCTAATGTTGAAAGCCTGGAATTTTATGAATGCTCAAGTTTGGTGAAGCTCCCATCAACTTTTGGGAATCTTACTAATCTCAGAGTGTTGGGTCTTAGAGAATGCTCAAGTATGGTGGAGCTCCCATCCTCGTTTGGGAATCTTACTAATCTCCAAGTATTGAATCTTAGAAAATGCTCAACTCTGGTGGAACTCCCCTCCTCATTTGTGAATCTTACTAATCTCGAAAATTTGGATCTTAGAGATTGCTCAAGTCTACTCCCCTCCTCGTTTGGGAATGTCACTTATCTCAAGAGATTGAAGTTTTATAAATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_3 NB-ARC TIR

Protein Analysis

867

Amino Acids

98.51

Weight (kDa)

6.16

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 62 - 239 2.4e-63 TIR domain
TIR_2 PF13676 65 - 162 4.4e-14 TIR domain
NB-ARC PF00931 242 - 415 2e-15 NB-ARC domain
WHD_ROQ1 PF23282 484 - 552 9e-12 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 720 - 793 9.5e-09 Leucine-rich repeat region
LRR_14 PF23598 782 - 865 8.7e-15 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2595
AccB7I CCANNNNNTGG 2 cut(s) 1256, 2230
AccI GTMKAC 3 cut(s) 1300, 1869, 2542
AccII CGCG 6 cut(s) 181, 210, 893, 1887, 1896, 1933
AciI CCGC 9 cut(s) 208, 210, 223, 891, 1881, 1887, 1894, 1931, 1997
AclWI GGATC 8 cut(s) 470, 483, 982, 1172, 1323, 1336, 2241, 2529
AcsI RAATTY 7 cut(s) 89, 854, 1146, 1836, 1989, 2306, 2515
AcuI CTGAAG 2 cut(s) 1808, 2063
AcvI CACGTG 1 cut(s) 695
AcyI GRCGYC 1 cut(s) 686
AdeI CACNNNGTG 1 cut(s) 1897
AfaI GTAC 4 cut(s) 64, 896, 1068, 1713
AflII CTTAAG 1 cut(s) 1316
AgeI ACCGGT 1 cut(s) 500
AjiI CACGTC 1 cut(s) 1558
AjnI CCWGG 6 cut(s) 799, 972, 1108, 1666, 1951, 2301
AjuI GAANNNNNNNTTGG 2 cut(s) 1503, 1535
Alw21I GWGCWC 2 cut(s) 2265, 2409
Alw26I GTCTC 3 cut(s) 150, 963, 1905
AlwI GGATC 8 cut(s) 470, 483, 982, 1172, 1323, 1336, 2241, 2529
Ama87I CYCGRG 1 cut(s) 2009
AoxI GGCC 1 cut(s) 1206
ApeKI GCWGC 3 cut(s) 32, 35, 1516
ApoI RAATTY 7 cut(s) 89, 854, 1146, 1836, 1989, 2306, 2515
ArsI GACNNNNNNTTYG 2 cut(s) 636, 668
AsiGI ACCGGT 1 cut(s) 500
Asp700I GAANNNNTTC 5 cut(s) 327, 518, 1641, 1802, 1989
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 5 cut(s) 317, 345, 794, 1106, 1207
AsuC2I CCSGG 1 cut(s) 1340
AsuHPI GGTGA 7 cut(s) 144, 515, 1382, 1856, 1883, 2125, 2341
AvaI CYCGRG 1 cut(s) 2009
AvaII GGWCC 4 cut(s) 317, 345, 794, 1106
BamHI GGATCC 2 cut(s) 475, 1328
BanII GRGCYC 2 cut(s) 2265, 2409
BbrPI CACGTG 1 cut(s) 695
BbsI GAAGAC 1 cut(s) 782
Bbv12I GWGCWC 2 cut(s) 2265, 2409
BbvI GCAGC 3 cut(s) 19, 22, 1528
BccI CCATC 8 cut(s) 108, 487, 558, 712, 1250, 1765, 2347, 2419
BceAI ACGGC 2 cut(s) 673, 1842
BcgI CGANNNNNNTGC 4 cut(s) 11, 45, 1738, 1772
BciT130I CCWGG 6 cut(s) 801, 974, 1110, 1668, 1953, 2303
BcnI CCSGG 1 cut(s) 1340
BcoDI GTCTC 3 cut(s) 150, 963, 1905
BfaI CTAG 4 cut(s) 825, 1103, 1472, 2255
BfrI CTTAAG 1 cut(s) 1316
BglII AGATCT 1 cut(s) 827
BisI GCNGC 3 cut(s) 33, 36, 1517
BlsI GCNGC 3 cut(s) 34, 37, 1518
BmcAI AGTACT 1 cut(s) 1713
Bme1390I CCNGG 7 cut(s) 801, 974, 1110, 1340, 1668, 1953, 2303
Bme18I GGWCC 4 cut(s) 317, 345, 794, 1106
BmeT110I CYCGRG 1 cut(s) 2009
BmgBI CACGTC 1 cut(s) 1558
BmgT120I GGNCC 5 cut(s) 317, 345, 794, 1106, 1207
BmiI GGNNCC 4 cut(s) 346, 477, 795, 1330
BmrFI CCNGG 7 cut(s) 801, 974, 1110, 1340, 1668, 1953, 2303
BmsI GCATC 3 cut(s) 1066, 1423, 1681
BpiI GAAGAC 1 cut(s) 782
BplI GAGNNNNNCTC 2 cut(s) 2087, 2119
BpuEI CTTGAG 9 cut(s) 1991, 2089, 2135, 2185, 2233, 2305, 2377, 2521, 2561
BpuMI CCSGG 1 cut(s) 1340
BsaAI YACGTR 2 cut(s) 695, 1604
BsaBI GATNNNNATC 3 cut(s) 356, 1056, 1124
BsaHI GRCGYC 1 cut(s) 686
BsaJI CCNNGG 8 cut(s) 208, 800, 1080, 1109, 1141, 1339, 1376, 1807
BsaWI WCCGGW 1 cut(s) 500
Bse118I RCCGGY 1 cut(s) 500
Bse3DI GCAATG 1 cut(s) 819
Bse8I GATNNNNATC 3 cut(s) 356, 1056, 1124
BseBI CCWGG 6 cut(s) 801, 974, 1110, 1668, 1953, 2303
BseDI CCNNGG 8 cut(s) 208, 800, 1080, 1109, 1141, 1339, 1376, 1807
BseGI GGATG 2 cut(s) 723, 2411
BseJI GATNNNNATC 3 cut(s) 356, 1056, 1124
BseMI GCAATG 1 cut(s) 819
BseMII CTCAG 6 cut(s) 250, 777, 854, 1438, 1557, 2380
BseRI GAGGAG 5 cut(s) 318, 1280, 2188, 2476, 2542
BseXI GCAGC 3 cut(s) 19, 22, 1528
Bsh1236I CGCG 6 cut(s) 181, 210, 893, 1887, 1896, 1933
Bsh1285I CGRYCG 1 cut(s) 1885
BshFI GGCC 1 cut(s) 1208
BshTI ACCGGT 1 cut(s) 500
BsiEI CGRYCG 1 cut(s) 1885
BsiHKAI GWGCWC 2 cut(s) 2265, 2409
BsiHKCI CYCGRG 1 cut(s) 2009
BsiSI CCGG 2 cut(s) 501, 1339
BslFI GGGAC 2 cut(s) 1231, 1326
BsmAI GTCTC 3 cut(s) 150, 963, 1905
BsmBI CGTCTC 1 cut(s) 150
BsmFI GGGAC 2 cut(s) 1231, 1326
BsmI GAATGC 4 cut(s) 1413, 2249, 2321, 2393
BsnI GGCC 1 cut(s) 1208
BsoBI CYCGRG 1 cut(s) 2009
Bsp1286I GDGCHC 2 cut(s) 2265, 2409
BspACI CCGC 9 cut(s) 208, 210, 223, 891, 1881, 1887, 1894, 1931, 1997
BspANI GGCC 1 cut(s) 1208
BspCNI CTCAG 6 cut(s) 249, 776, 855, 1437, 1558, 2379
BspFNI CGCG 6 cut(s) 181, 210, 893, 1887, 1896, 1933
BspHI TCATGA 1 cut(s) 1660
BspLI GGNNCC 4 cut(s) 346, 477, 795, 1330
BspPI GGATC 8 cut(s) 470, 483, 982, 1172, 1323, 1336, 2241, 2529
BspTI CTTAAG 1 cut(s) 1316
BsrDI GCAATG 1 cut(s) 819
BsrFI RCCGGY 1 cut(s) 500
BssAI RCCGGY 1 cut(s) 500
BssECI CCNNGG 8 cut(s) 208, 800, 1080, 1109, 1141, 1339, 1376, 1807
BssNAI GTATAC 1 cut(s) 1870
BssNI GRCGYC 1 cut(s) 686
BssT1I CCWWGG 2 cut(s) 1080, 1376
Bst1107I GTATAC 1 cut(s) 1870
Bst2UI CCWGG 6 cut(s) 801, 974, 1110, 1668, 1953, 2303
Bst4CI ACNGT 5 cut(s) 28, 144, 451, 951, 2088
Bst6I CTCTTC 1 cut(s) 1197
BstACI GRCGYC 1 cut(s) 686
BstAFI CTTAAG 1 cut(s) 1316
BstAPI GCANNNNNTGC 1 cut(s) 1615
BstBAI YACGTR 2 cut(s) 695, 1604
BstC8I GCNNGC 6 cut(s) 1226, 1230, 1272, 1477, 1620, 1967
BstDSI CCRYGG 1 cut(s) 208
BstEII GGTNACC 2 cut(s) 1844, 1889
BstF5I GGATG 2 cut(s) 723, 2411
BstFNI CGCG 6 cut(s) 181, 210, 893, 1887, 1896, 1933
BstHHI GCGC 1 cut(s) 1159
BstMAI GTCTC 3 cut(s) 150, 963, 1905
BstMCI CGRYCG 1 cut(s) 1885
BstMWI GCNNNNNNNGC 4 cut(s) 596, 1615, 1893, 1930
BstNI CCWGG 6 cut(s) 801, 974, 1110, 1668, 1953, 2303
BstNSI RCATGY 3 cut(s) 1228, 1232, 1613
BstPI GGTNACC 2 cut(s) 1844, 1889
BstSCI CCNGG 7 cut(s) 799, 972, 1108, 1338, 1666, 1951, 2301
BstSNI TACGTA 1 cut(s) 1604
BstUI CGCG 6 cut(s) 181, 210, 893, 1887, 1896, 1933
BstV1I GCAGC 3 cut(s) 19, 22, 1528
BstV2I GAAGAC 1 cut(s) 782
BstX2I RGATCY 6 cut(s) 475, 827, 987, 1328, 2233, 2521
BstYI RGATCY 6 cut(s) 475, 827, 987, 1328, 2233, 2521
BstZ17I GTATAC 1 cut(s) 1870
BsuRI GGCC 1 cut(s) 1208
BtgI CCRYGG 1 cut(s) 208
BtrI CACGTC 1 cut(s) 1558
BtsCI GGATG 2 cut(s) 723, 2411
BtsIMutI CAGTG 3 cut(s) 456, 661, 1716
Cac8I GCNNGC 6 cut(s) 1226, 1230, 1272, 1477, 1620, 1967
CciI TCATGA 1 cut(s) 1660
CfoI GCGC 1 cut(s) 1159
Cfr10I RCCGGY 1 cut(s) 500
Cfr13I GGNCC 5 cut(s) 317, 345, 794, 1106, 1207
Cfr42I CCGCGG 1 cut(s) 211
CseI GACGC 1 cut(s) 694
Csp6I GTAC 4 cut(s) 63, 895, 1067, 1712
CspAI ACCGGT 1 cut(s) 500
CspCI CAANNNNNGTGG 6 cut(s) 2238, 2273, 2382, 2417, 2454, 2489
CviAII CATG 7 cut(s) 637, 730, 1160, 1225, 1229, 1610, 1661
CviQI GTAC 4 cut(s) 63, 895, 1067, 1712
DraIII CACNNNGTG 1 cut(s) 1897
Eam1104I CTCTTC 1 cut(s) 1197
EarI CTCTTC 1 cut(s) 1197
Ecl136II GAGCTC 2 cut(s) 2263, 2407
Eco105I TACGTA 1 cut(s) 1604
Eco130I CCWWGG 2 cut(s) 1080, 1376
Eco24I GRGCYC 2 cut(s) 2265, 2409
Eco47I GGWCC 4 cut(s) 317, 345, 794, 1106
Eco53kI GAGCTC 2 cut(s) 2263, 2407
Eco57I CTGAAG 2 cut(s) 1808, 2063
Eco72I CACGTG 1 cut(s) 695
Eco88I CYCGRG 1 cut(s) 2009
Eco91I GGTNACC 2 cut(s) 1844, 1889
EcoICRI GAGCTC 2 cut(s) 2263, 2407
EcoO109I RGGNCCY 3 cut(s) 794, 1106, 1207
EcoO65I GGTNACC 2 cut(s) 1844, 1889
EcoRI GAATTC 1 cut(s) 1989
EcoRII CCWGG 6 cut(s) 799, 972, 1108, 1666, 1951, 2301
EcoT14I CCWWGG 2 cut(s) 1080, 1376
EcoT22I ATGCAT 2 cut(s) 1230, 1611
EcoT38I GRGCYC 2 cut(s) 2265, 2409
ErhI CCWWGG 2 cut(s) 1080, 1376
Esp3I CGTCTC 1 cut(s) 150
FaeI CATG 7 cut(s) 640, 733, 1163, 1228, 1232, 1613, 1664
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FaqI GGGAC 2 cut(s) 1231, 1326
FatI CATG 7 cut(s) 636, 729, 1159, 1224, 1228, 1609, 1660
FauI CCCGC 2 cut(s) 203, 1938
FauNDI CATATG 2 cut(s) 1252, 1584
FblI GTMKAC 3 cut(s) 1300, 1869, 2542
Fnu4HI GCNGC 3 cut(s) 33, 36, 1517
FokI GGATG 2 cut(s) 730, 2398
FriOI GRGCYC 2 cut(s) 2265, 2409
Fsp4HI GCNGC 3 cut(s) 33, 36, 1517
FspBI CTAG 4 cut(s) 825, 1103, 1472, 2255
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 3 cut(s) 33, 36, 1517
HaeIII GGCC 1 cut(s) 1208
HapII CCGG 2 cut(s) 501, 1339
HgaI GACGC 1 cut(s) 694
HhaI GCGC 1 cut(s) 1159
Hin1I GRCGYC 1 cut(s) 686
Hin1II CATG 7 cut(s) 640, 733, 1163, 1228, 1232, 1613, 1664
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HindIII AAGCTT 3 cut(s) 202, 573, 1967
HpaII CCGG 2 cut(s) 501, 1339
HphI GGTGA 7 cut(s) 144, 515, 1382, 1856, 1883, 2125, 2341
Hpy166II GTNNAC 7 cut(s) 82, 897, 1301, 1362, 1649, 1870, 2543
Hpy8I GTNNAC 7 cut(s) 82, 897, 1301, 1362, 1649, 1870, 2543
Hpy99I CGWCG 1 cut(s) 688
HpyAV CCTTC 9 cut(s) 159, 244, 508, 1220, 1475, 1813, 1979, 2038, 2133
HpyCH4III ACNGT 5 cut(s) 28, 144, 451, 951, 2088
HpyCH4IV ACGT 4 cut(s) 694, 1557, 1603, 1675
HpyCH4V TGCA 9 cut(s) 38, 429, 937, 1007, 1224, 1228, 1609, 1694, 1924
HpyF10VI GCNNNNNNNGC 4 cut(s) 596, 1615, 1893, 1930
HpySE526I ACGT 4 cut(s) 694, 1557, 1603, 1675
Hsp92I GRCGYC 1 cut(s) 686
Hsp92II CATG 7 cut(s) 640, 733, 1163, 1228, 1232, 1613, 1664
HspAI GCGC 1 cut(s) 1157
KspI CCGCGG 1 cut(s) 211
LmnI GCTCC 8 cut(s) 1267, 2047, 2124, 2260, 2268, 2340, 2404, 2412
Lsp1109I GCAGC 3 cut(s) 19, 22, 1528
LweI GCATC 3 cut(s) 1066, 1423, 1681
MaeI CTAG 4 cut(s) 825, 1103, 1472, 2255
MaeII ACGT 4 cut(s) 694, 1557, 1603, 1675
MaeIII GTNAC 9 cut(s) 239, 602, 690, 1282, 1427, 1844, 1859, 1889, 2566
MflI RGATCY 6 cut(s) 475, 827, 987, 1328, 2233, 2521
MhlI GDGCHC 2 cut(s) 2265, 2409
MlyI GAGTC 3 cut(s) 755, 1123, 1381
MmeI TCCRAC 1 cut(s) 1097
Mph1103I ATGCAT 2 cut(s) 1230, 1611
MroXI GAANNNNTTC 5 cut(s) 327, 518, 1641, 1802, 1989
MseI TTAA 2 cut(s) 1317, 1592
MslI CAYNNNNRTG 1 cut(s) 1491
MspA1I CMGCKG 1 cut(s) 210
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 2 cut(s) 501, 1339
MspR9I CCNGG 7 cut(s) 801, 974, 1110, 1340, 1668, 1953, 2303
Mva1269I GAATGC 4 cut(s) 1413, 2249, 2321, 2393
MvaI CCWGG 6 cut(s) 801, 974, 1110, 1668, 1953, 2303
MvnI CGCG 6 cut(s) 181, 210, 893, 1887, 1896, 1933
MwoI GCNNNNNNNGC 4 cut(s) 596, 1615, 1893, 1930
NciI CCSGG 1 cut(s) 1340
NdeI CATATG 2 cut(s) 1252, 1584
NlaIII CATG 7 cut(s) 640, 733, 1163, 1228, 1232, 1613, 1664
NlaIV GGNNCC 4 cut(s) 346, 477, 795, 1330
NmuCI GTSAC 6 cut(s) 239, 690, 1844, 1859, 1889, 2566
NsiI ATGCAT 2 cut(s) 1230, 1611
NspI RCATGY 3 cut(s) 1228, 1232, 1613
PaeI GCATGC 2 cut(s) 1228, 1232
PaeR7I CTCGAG 1 cut(s) 2009
PagI TCATGA 1 cut(s) 1660
PctI GAATGC 4 cut(s) 1413, 2249, 2321, 2393
PdmI GAANNNNTTC 5 cut(s) 327, 518, 1641, 1802, 1989
PflFI GACNNNGTC 2 cut(s) 688, 1674
PflMI CCANNNNNTGG 2 cut(s) 1256, 2230
PinAI ACCGGT 1 cut(s) 500
PkrI GCNGC 3 cut(s) 34, 37, 1518
PleI GAGTC 3 cut(s) 755, 1122, 1381
PmaCI CACGTG 1 cut(s) 695
PmlI CACGTG 1 cut(s) 695
PpsI GAGTC 3 cut(s) 755, 1122, 1381
Ppu21I YACGTR 2 cut(s) 695, 1604
PpuMI RGGWCCY 2 cut(s) 794, 1106
PsiI TTATAA 1 cut(s) 2595
Psp124BI GAGCTC 2 cut(s) 2265, 2409
Psp5II RGGWCCY 2 cut(s) 794, 1106
Psp6I CCWGG 6 cut(s) 799, 972, 1108, 1666, 1951, 2301
PspCI CACGTG 1 cut(s) 695
PspEI GGTNACC 2 cut(s) 1844, 1889
PspGI CCWGG 6 cut(s) 799, 972, 1108, 1666, 1951, 2301
PspN4I GGNNCC 4 cut(s) 346, 477, 795, 1330
PspPI GGNCC 5 cut(s) 317, 345, 794, 1106, 1207
PspPPI RGGWCCY 2 cut(s) 794, 1106
PsuI RGATCY 6 cut(s) 475, 827, 987, 1328, 2233, 2521
PsyI GACNNNGTC 2 cut(s) 688, 1674
RsaI GTAC 4 cut(s) 64, 896, 1068, 1713
RsaNI GTAC 4 cut(s) 63, 895, 1067, 1712
RseI CAYNNNNRTG 1 cut(s) 1491
SacI GAGCTC 2 cut(s) 2265, 2409
SacII CCGCGG 1 cut(s) 211
SaqAI TTAA 2 cut(s) 1317, 1592
SatI GCNGC 3 cut(s) 33, 36, 1517
Sau96I GGNCC 5 cut(s) 317, 345, 794, 1106, 1207
ScaI AGTACT 1 cut(s) 1713
SchI GAGTC 3 cut(s) 755, 1123, 1381
ScrFI CCNGG 7 cut(s) 801, 974, 1110, 1340, 1668, 1953, 2303
SduI GDGCHC 2 cut(s) 2265, 2409
SfaNI GCATC 3 cut(s) 1066, 1423, 1681
Sfr274I CTCGAG 1 cut(s) 2009
Sfr303I CCGCGG 1 cut(s) 211
SgrBI CCGCGG 1 cut(s) 211
SinI GGWCC 4 cut(s) 317, 345, 794, 1106
SlaI CTCGAG 1 cut(s) 2009
SmiMI CAYNNNNRTG 1 cut(s) 1491
SnaBI TACGTA 1 cut(s) 1604
SphI GCATGC 2 cut(s) 1228, 1232
SsiI CCGC 9 cut(s) 208, 210, 223, 891, 1881, 1887, 1894, 1931, 1997
SspMI CTAG 4 cut(s) 825, 1103, 1472, 2255
SstI GAGCTC 2 cut(s) 2265, 2409
StyD4I CCNGG 7 cut(s) 799, 972, 1108, 1338, 1666, 1951, 2301
StyI CCWWGG 2 cut(s) 1080, 1376
TaaI ACNGT 5 cut(s) 28, 144, 451, 951, 2088
TaiI ACGT 4 cut(s) 697, 1560, 1606, 1678
TaqI TCGA 8 cut(s) 21, 103, 642, 683, 1167, 1758, 2010, 2511
TaqII GACCGA 2 cut(s) 305, 1155
TatI WGTACW 2 cut(s) 1066, 1711
Tru1I TTAA 2 cut(s) 1317, 1592
Tru9I TTAA 2 cut(s) 1317, 1592
TscAI CASTG 3 cut(s) 456, 661, 1723
TseFI GTSAC 6 cut(s) 239, 690, 1844, 1859, 1889, 2566
TseI GCWGC 3 cut(s) 32, 35, 1516
Tsp45I GTSAC 6 cut(s) 239, 690, 1844, 1859, 1889, 2566
TspDTI ATGAA 9 cut(s) 755, 783, 788, 942, 1215, 1457, 1649, 1819, 2328
TspGWI ACGGA 2 cut(s) 1413, 1878
TspRI CASTG 3 cut(s) 456, 661, 1723
Tth111I GACNNNGTC 2 cut(s) 688, 1674
Van91I CCANNNNNTGG 2 cut(s) 1256, 2230
Vha464I CTTAAG 1 cut(s) 1316
VpaK11BI GGWCC 4 cut(s) 317, 345, 794, 1106
XapI RAATTY 7 cut(s) 89, 854, 1146, 1836, 1989, 2306, 2515
XceI RCATGY 3 cut(s) 1228, 1232, 1613
XhoI CTCGAG 1 cut(s) 2009
XmiI GTMKAC 3 cut(s) 1300, 1869, 2542
XmnI GAANNNNTTC 5 cut(s) 327, 518, 1641, 1802, 1989
XspI CTAG 4 cut(s) 825, 1103, 1472, 2255
ZrmI AGTACT 1 cut(s) 1713
Zsp2I ATGCAT 2 cut(s) 1230, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.