AT1G63810

Nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008672
Physical Location & Seq
Reverse (-)
23669458 .. 23675949
6492 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G63810.1

Sequence Viewer

Length: 3162 bp
ATGGAGGCAGATACTAAGACAGACTCTCGTACTCTGAAAGTTAACGACTTGTTAAAAGATGCTCGCTTAGATTACGATTCTCTCAGGAAGCTTGTTGATGATACCGTTTCGTCGATTAAAGAAGCTATTGATGGAATCCCTGAAAAATTTCAGGTTACCTCGGAGTTAGCTCCTAGTTTTGTTGAGGACATTGGGGCAGATAAAGAAGTGGAGTTCAGTTTTAAGAAGCCAAATGGTTTCAATCTCTGTGGAAGTTACTCCATTTGTGGCATGGCAAAGCCGGATACTTCTGTTGATCTTCTTGTTCACTTGCCTAAAGAATGTTTTTATGAGAAGGATTACATGAATCATAGATACCATGCCAAAAGATGTCTATATCTTTGTGTTATTGAAAAGCATTTGTTGTCGTCATCGTCCATTGAGAAGGTTGTATGGTCAACCTTACATAACGAAGCTAGGAAGCCAGTCCTTGTTGTTTTCCCAGCTAAGAAACTTGATCAGTTTCCTGGATTTTCCATAAGGTTAATCCCTTCCGCAACATCACTGTTTAGTGTTGCAAAATTGAGTATTAGCAGAAACAACGTCCGTTCTGTAACTGCAGATGGTGTCCCTGAGCCCACGCCAACTTACAACTCAAGCATATTGGAGGACATGTTTCTGGAGGAAAATTCTGAGTTTCTCAAGAAAACCTTCTCTGAGTGGAAGGAGTTGAGCGATGCTTTGATTTTGCTGAAGATATGGGCAAGACAAAGGAGCTCGATATACGTCCACGATTGCTTGAACGGATTTCTAATCTCTGTGATACTTTCATATCTTGCAACCCATTCCAAAATTAACAAGGCACTAAGTGCATTAGATATATTCAGAGTGACATTGGATTTCATAGCCACTTCTAAATTATGGGAGAGAGGTTTGTATCTTCCGCCACAGAGTGAAATTCGTGTCTCGAAGGAGGAGAAGATGCAGTTCAGAGAGTTGTTCCCTGTTGTTATATGCGATTCATCTACGTTTGTGAACTTGGCTTTCCGGATGACCAGTGTTGGATTCCTGGAGCTTCAAGATGAGGCTTCTTTGACGCTTAAGTGTATGGAGAAACTCAGAGATGGGGGATTCGAGGAGATTTTTATGACTAAGATTGACTATCCTGTTAAGTATGACCACTGCATAAGGTTACAGCTAAAGGGGAAAACAGCAGTGTCTCTGTCAGGGTTTTGTTTGGACAAGGAATGTTGGAGACTCTATGAGCAGAAAGTGCATAGCCTGCTTTTAGAAGGACTCGGTGACAGAGCTAAATCAATCCGTGTAGTTTGGAGAAATACCAATCAAGATTGGCATGTAGAGAGTGGCTTGTCAGTTCTTGACAGAGAACCTCTTTTCATTGGCATATCTGTCAGCTCCACTGAAAAGGCTTATAGAACAGTTGATATTGGGCCAGATGCTGAAAACAAGATAGAGGCACTTAGATTCCGGAAGTTTTGGGGTGAGAAGTCTGATCTAAGGAGGTTTAAAGATGGAAGAATATCTGAAAGCACAGTTTGGGAGACTCAGCAGTGGACCAAACATCTTATCATGAAACAAATTGTTGAATATATCCTTAAGCGGCATCTTTCACTGACGTCCGATGACATTGTACAATTAGTGGATCAACTTGATTTCTCTCTAAACTATGGGGGCAAAGACCCAATATCTTTATCTGGAAATTTGGTTCAAGCCTATGAAGTTTTATCAAAGTGCTTGCGTGAGATTGAAGGCATACCTCTCAAAGTCTCTAGCGTTCAGTCTTTAGATTCAGCTCTCAGGTTCACATCCGTATTCCCTCCTGAACCTCACCCAGTGGCTTGCGAAAAAATCGATTCGCGAAGACTGCAAAAACTTATACCATCCTGCATTCCAGCAATGGAAGTCATGATTCAGCTAGAAGGTTCTGGTAACTGGCCCATGGATGATTTAGCAGTTGAGAAAACAAAATCTGCCTTCCTCCTGAAAATTGCAGAGAGCCTTCAGAACGTCAAGGGAATACCATGCACAGCTACTGAGGATAATGTCGATGTTTTCATTGGTGGTTACGCATTTCGCTTGAGAATATTGCATGAAAGAGGCCTGAGTTTGGTGAAGAGAGAAATTGGAGTGGACCCGGTGAAGCATGTTTCCTCTACCGATAAAATGCTTTTTATTCGTAGTCAACATGCAAGTATGATTAATGGTTTGCAAGGTCGATTTCCTGTATACGCACCAGTTGCCAGGCTTGCAAAAAGATGGGTTTCTGCGCATCTCTTTTCTGGTTGCCTGGCAGAAGAGGCCATTGAACTTTTGGTTGCTTATCTCTTCCTCACACCTCTCCCACTCGGTGTTCCTTCCTCCCGGATTAATGGATTCTTAAGGTTCTTGCGATTACTAGCAGACTATGAATGGATGTTCTACCCGTTGATTGTTGACATAAACAATGACTTTGGTAGAAATGACGAGAAAGAGATCAATGATAACTTCATGTCAAGTAGAAAAGGCTACGAAGAGGACAAACAAAACATAAGTTCAGCTATGTTCTTGGCTGCTCCTTACGACAAGGCATCAGAGGCATGGACATCAACTTCACCAAATTTATTGGAACAAAAAAGGTTGGTGGCTTATGCTCGAAGCAGTGCAAACGTGTTGAGCAAGATGGTATTGCAAGAACATAATGATTCTGTTCAATGGGAGTGCCTTTTCAGGACACCCTTGAACAACTATGACGCAGTTATTCTTCTCCATAGAGACAAATTACCTTATCCACGTCGTCTTCTGTTTCCATCTGAACTTAACCAAGGGAAGCATGTAGCACGGGGAAAAGCGAGTAGATTGTTCAACCCATTTATGTCGCCTGGAGATTTGAAGAGAAGCCATGAAGAGCTTAAGAATAAGCTAATGGTGGACTTCGAGCCGACCAAGTGCTTGTTGAGTGGGTTGCAGGAAGAGTTTGGGACGTTGAAGCCATGGTATGATCATATAGGAGGCGACGCAATTGGTTTAACATGGAACAAACACAATTCAAAGAAACGAGAACGAGATGAAGAAGAAGAAGAAGAAGAAGAAAGTAATCCAATGGAGATGTTAAAGGCGGTAGGCGAAATGGGTAAAGGGTTAGTGAGGGATATCTATTTGCTCAAGCCTCCACGCTTTGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
Nrap Nrap_D2 Nrap_D3 Nrap_D4 Nrap_D5 Nrap_D6

Protein Analysis

1053

Amino Acids

120.15

Weight (kDa)

6.42

Isoelectric Point (pI)

48.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nrap PF03813 98 - 232 1e-37 Nrap protein domain 1
Nrap_D2 PF17403 237 - 378 3.4e-34 Nrap protein PAP/OAS-like domain
Nrap_D3 PF17404 383 - 537 7.5e-41 Nrap protein domain 3
Nrap_D4 PF17405 560 - 737 1.2e-42 Nrap protein nucleotidyltransferase domain 4
Nrap_D5 PF17406 740 - 903 1.5e-45 Nrap protein PAP/OAS1-like domain 5
Nrap_D6 PF17407 906 - 1044 3.3e-14 Nrap protein domain 6
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1619
Acc16I TGCGCA 1 cut(s) 2268
AccI GTMKAC 1 cut(s) 2226
AccII CGCG 1 cut(s) 1858
AccIII TCCGGA 2 cut(s) 1026, 1467
AciI CCGC 4 cut(s) 534, 923, 1600, 3095
AclWI GGATC 1 cut(s) 1650
AcsI RAATTY 5 cut(s) 146, 667, 936, 1699, 2596
AcuI CTGAAG 2 cut(s) 752, 1985
AcyI GRCGYC 1 cut(s) 1616
AdeI CACNNNGTG 4 cut(s) 848, 932, 1834, 2348
AfaI GTAC 2 cut(s) 31, 1632
AfiI CCNNNNNNNGG 1 cut(s) 2107
AflII CTTAAG 4 cut(s) 1079, 1595, 2377, 2888
AflIII ACRYGT 2 cut(s) 651, 2646
AjiI CACGTC 1 cut(s) 2771
AjnI CCWGG 5 cut(s) 505, 1047, 2240, 2286, 2857
AloI GAACNNNNNNTCC 2 cut(s) 1689, 1721
Alw21I GWGCWC 1 cut(s) 758
Alw26I GTCTC 6 cut(s) 949, 1203, 1228, 1535, 1771, 2745
AlwI GGATC 1 cut(s) 1650
AlwNI CAGNNNCTG 2 cut(s) 1439, 2033
Aor13HI TCCGGA 2 cut(s) 1026, 1467
AoxI GGCC 4 cut(s) 1430, 1934, 2098, 2298
ApeKI GCWGC 1 cut(s) 2549
ApoI RAATTY 5 cut(s) 146, 667, 936, 1699, 2596
AseI ATTAAT 2 cut(s) 2199, 2367
Asp700I GAANNNNTTC 2 cut(s) 147, 689
AspLEI GCGC 1 cut(s) 2269
AspS9I GGNCC 4 cut(s) 1430, 1554, 1935, 2131
AsuC2I CCSGG 2 cut(s) 2135, 2362
AsuHPI GGTGA 6 cut(s) 1292, 1493, 1820, 2122, 2149, 2583
AvaII GGWCC 2 cut(s) 1554, 2131
BaeI ACNNNNGTAYC 2 cut(s) 276, 309
BanII GRGCYC 2 cut(s) 618, 758
BbsI GAAGAC 2 cut(s) 1867, 2768
Bbv12I GWGCWC 1 cut(s) 758
BbvI GCAGC 1 cut(s) 2536
BccI CCATC 8 cut(s) 125, 596, 1097, 1505, 1888, 2250, 2653, 2794
BciT130I CCWGG 5 cut(s) 507, 1049, 2242, 2288, 2859
BciVI GTATCC 1 cut(s) 277
BclI TGATCA 2 cut(s) 496, 2977
BcnI CCSGG 2 cut(s) 2135, 2362
BcoDI GTCTC 6 cut(s) 949, 1203, 1228, 1535, 1771, 2745
BfaI CTAG 5 cut(s) 174, 456, 1770, 1916, 2396
BfmI CTRYAG 1 cut(s) 597
BfrI CTTAAG 4 cut(s) 1079, 1595, 2377, 2888
BfuI GTATCC 1 cut(s) 277
BisI GCNGC 2 cut(s) 1601, 2550
BlsI GCNGC 2 cut(s) 1602, 2551
Bme1390I CCNGG 7 cut(s) 507, 1049, 2135, 2242, 2288, 2362, 2859
Bme18I GGWCC 2 cut(s) 1554, 2131
BmgBI CACGTC 1 cut(s) 2771
BmgT120I GGNCC 4 cut(s) 1430, 1554, 1935, 2131
BmiI GGNNCC 1 cut(s) 2133
BmrFI CCNGG 7 cut(s) 507, 1049, 2135, 2242, 2288, 2362, 2859
BmrI ACTGGG 1 cut(s) 1826
BmsI GCATC 7 cut(s) 49, 706, 951, 1426, 1612, 2278, 2576
BmuI ACTGGG 1 cut(s) 1826
BpiI GAAGAC 2 cut(s) 1867, 2768
BpmI CTGGAG 3 cut(s) 680, 1070, 2880
Bpu10I CCTNAGC 1 cut(s) 612
BpuEI CTTGAG 4 cut(s) 619, 665, 2098, 3125
BpuMI CCSGG 2 cut(s) 2135, 2362
Bsa29I ATCGAT 1 cut(s) 1851
BsaHI GRCGYC 1 cut(s) 1616
BsaJI CCNNGG 4 cut(s) 159, 1938, 2800, 2969
BsaWI WCCGGW 2 cut(s) 1026, 1467
BsaXI ACNNNNNCTCC 2 cut(s) 638, 668
Bsc4I CCNNNNNNNGG 1 cut(s) 2107
Bse1I ACTGG 5 cut(s) 464, 1035, 1832, 1937, 2234
Bse3DI GCAATG 1 cut(s) 1902
BseAI TCCGGA 2 cut(s) 1026, 1467
BseBI CCWGG 5 cut(s) 507, 1049, 2242, 2288, 2859
BseCI ATCGAT 1 cut(s) 1851
BseDI CCNNGG 4 cut(s) 159, 1938, 2800, 2969
BseGI GGATG 5 cut(s) 1035, 1805, 1880, 1948, 2418
BseLI CCNNNNNNNGG 1 cut(s) 2107
BseMI GCAATG 1 cut(s) 1902
BseMII CTCAG 9 cut(s) 97, 603, 663, 687, 1111, 1559, 1810, 2025, 2093
BseNI ACTGG 5 cut(s) 464, 1035, 1832, 1937, 2234
BseRI GAGGAG 2 cut(s) 968, 1130
BseXI GCAGC 1 cut(s) 2536
BseYI CCCAGC 1 cut(s) 481
Bsh1236I CGCG 1 cut(s) 1858
BshFI GGCC 4 cut(s) 1432, 1936, 2100, 2300
BshVI ATCGAT 1 cut(s) 1851
BsiHKAI GWGCWC 1 cut(s) 758
BsiSI CCGG 5 cut(s) 281, 1027, 1468, 2135, 2362
BslFI GGGAC 2 cut(s) 593, 2971
BslI CCNNNNNNNGG 1 cut(s) 2107
BsmAI GTCTC 6 cut(s) 949, 1203, 1228, 1535, 1771, 2745
BsmFI GGGAC 2 cut(s) 593, 2971
BsmI GAATGC 1 cut(s) 1887
BsnI GGCC 4 cut(s) 1432, 1936, 2100, 2300
Bsp1286I GDGCHC 2 cut(s) 618, 758
Bsp13I TCCGGA 2 cut(s) 1026, 1467
Bsp1407I TGTACA 1 cut(s) 1630
Bsp143I GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
Bsp19I CCATGG 2 cut(s) 1938, 2969
Bsp68I TCGCGA 1 cut(s) 1858
BspACI CCGC 4 cut(s) 534, 923, 1600, 3095
BspANI GGCC 4 cut(s) 1432, 1936, 2100, 2300
BspCNI CTCAG 9 cut(s) 96, 604, 664, 688, 1110, 1558, 1809, 2026, 2094
BspDI ATCGAT 1 cut(s) 1851
BspEI TCCGGA 2 cut(s) 1026, 1467
BspFNI CGCG 1 cut(s) 1858
BspHI TCATGA 2 cut(s) 1569, 1905
BspLI GGNNCC 1 cut(s) 2133
BspMAI CTGCAG 1 cut(s) 601
BspPI GGATC 1 cut(s) 1650
BspQI GCTCTTC 1 cut(s) 2877
BspTI CTTAAG 4 cut(s) 1079, 1595, 2377, 2888
BsrDI GCAATG 1 cut(s) 1902
BsrGI TGTACA 1 cut(s) 1630
BsrI ACTGG 5 cut(s) 464, 1035, 1832, 1937, 2234
BssECI CCNNGG 4 cut(s) 159, 1938, 2800, 2969
BssMI GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
BssNAI GTATAC 1 cut(s) 2227
BssNI GRCGYC 1 cut(s) 1616
BssT1I CCWWGG 3 cut(s) 1938, 2800, 2969
Bst1107I GTATAC 1 cut(s) 2227
Bst2UI CCWGG 5 cut(s) 507, 1049, 2242, 2288, 2859
Bst4CI ACNGT 4 cut(s) 106, 546, 1420, 1534
Bst6I CTCTTC 7 cut(s) 2108, 2289, 2330, 2505, 2864, 2877, 2943
BstACI GRCGYC 1 cut(s) 1616
BstAFI CTTAAG 4 cut(s) 1079, 1595, 2377, 2888
BstAPI GCANNNNNTGC 4 cut(s) 848, 1252, 1261, 2237
BstAUI TGTACA 1 cut(s) 1630
BstC8I GCNNGC 5 cut(s) 64, 1262, 1736, 1840, 2247
BstDSI CCRYGG 2 cut(s) 1938, 2969
BstEII GGTNACC 1 cut(s) 154
BstF5I GGATG 5 cut(s) 1035, 1805, 1880, 1948, 2418
BstFNI CGCG 1 cut(s) 1858
BstHHI GCGC 1 cut(s) 2269
BstKTI GATC 6 cut(s) 298, 499, 1495, 1645, 2475, 2980
BstMAI GTCTC 6 cut(s) 949, 1203, 1228, 1535, 1771, 2745
BstMBI GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
BstMWI GCNNNNNNNGC 8 cut(s) 848, 1252, 1261, 1864, 2237, 2246, 2297, 2573
BstNI CCWGG 5 cut(s) 507, 1049, 2242, 2288, 2859
BstNSI RCATGY 5 cut(s) 655, 1337, 2147, 2189, 2813
BstPI GGTNACC 1 cut(s) 154
BstSCI CCNGG 7 cut(s) 505, 1047, 2133, 2240, 2286, 2360, 2857
BstSFI CTRYAG 1 cut(s) 597
BstUI CGCG 1 cut(s) 1858
BstV1I GCAGC 1 cut(s) 2536
BstV2I GAAGAC 2 cut(s) 1867, 2768
BstZ17I GTATAC 1 cut(s) 2227
Bsu15I ATCGAT 1 cut(s) 1851
BsuI GTATCC 1 cut(s) 277
BsuRI GGCC 4 cut(s) 1432, 1936, 2100, 2300
BsuTUI ATCGAT 1 cut(s) 1851
BtgI CCRYGG 2 cut(s) 1938, 2969
BtgZI GCGATG 1 cut(s) 729
BtrI CACGTC 1 cut(s) 2771
BtsCI GGATG 5 cut(s) 1035, 1805, 1880, 1948, 2418
BtsI GCAGTG 4 cut(s) 1159, 1200, 1556, 2644
BtsIMutI CAGTG 9 cut(s) 542, 1042, 1159, 1200, 1398, 1556, 1610, 1839, 2644
BtuMI TCGCGA 1 cut(s) 1858
Cac8I GCNNGC 5 cut(s) 64, 1262, 1736, 1840, 2247
CaiI CAGNNNCTG 2 cut(s) 1439, 2033
CciI TCATGA 2 cut(s) 1569, 1905
CfoI GCGC 1 cut(s) 2269
Cfr13I GGNCC 4 cut(s) 1430, 1554, 1935, 2131
ClaI ATCGAT 1 cut(s) 1851
CseI GACGC 3 cut(s) 1084, 2738, 3002
Csp6I GTAC 2 cut(s) 30, 1631
CspCI CAANNNNNGTGG 2 cut(s) 229, 264
CviQI GTAC 2 cut(s) 30, 1631
DpnI GATC 6 cut(s) 297, 498, 1494, 1644, 2474, 2979
DpnII GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
DraI TTTAAA 1 cut(s) 1507
DraIII CACNNNGTG 4 cut(s) 848, 932, 1834, 2348
Eam1104I CTCTTC 7 cut(s) 2108, 2289, 2330, 2505, 2864, 2877, 2943
EarI CTCTTC 7 cut(s) 2108, 2289, 2330, 2505, 2864, 2877, 2943
EciI GGCGGA 1 cut(s) 912
Ecl136II GAGCTC 1 cut(s) 756
Eco130I CCWWGG 3 cut(s) 1938, 2800, 2969
Eco147I AGGCCT 1 cut(s) 2100
Eco24I GRGCYC 2 cut(s) 618, 758
Eco32I GATATC 1 cut(s) 3130
Eco47I GGWCC 2 cut(s) 1554, 2131
Eco53kI GAGCTC 1 cut(s) 756
Eco57I CTGAAG 2 cut(s) 752, 1985
Eco91I GGTNACC 1 cut(s) 154
EcoICRI GAGCTC 1 cut(s) 756
EcoO65I GGTNACC 1 cut(s) 154
EcoRII CCWGG 5 cut(s) 505, 1047, 2240, 2286, 2857
EcoRV GATATC 1 cut(s) 3130
EcoT14I CCWWGG 3 cut(s) 1938, 2800, 2969
EcoT38I GRGCYC 2 cut(s) 618, 758
ErhI CCWWGG 3 cut(s) 1938, 2800, 2969
FalI AAGNNNNNCTT 2 cut(s) 674, 706
FaqI GGGAC 2 cut(s) 593, 2971
FbaI TGATCA 2 cut(s) 496, 2977
FblI GTMKAC 1 cut(s) 2226
Fnu4HI GCNGC 2 cut(s) 1601, 2550
FokI GGATG 5 cut(s) 1042, 1792, 1867, 1955, 2425
FriOI GRGCYC 2 cut(s) 618, 758
Fsp4HI GCNGC 2 cut(s) 1601, 2550
FspBI CTAG 5 cut(s) 174, 456, 1770, 1916, 2396
FspI TGCGCA 1 cut(s) 2268
GlaI GCGC 1 cut(s) 2268
GluI GCNGC 2 cut(s) 1601, 2550
GsaI CCCAGC 1 cut(s) 485
GsuI CTGGAG 3 cut(s) 680, 1070, 2880
HaeIII GGCC 4 cut(s) 1432, 1936, 2100, 2300
HapII CCGG 5 cut(s) 281, 1027, 1468, 2135, 2362
HgaI GACGC 3 cut(s) 1084, 2738, 3002
HhaI GCGC 1 cut(s) 2269
Hin1I GRCGYC 1 cut(s) 1616
Hin6I GCGC 1 cut(s) 2267
HinP1I GCGC 1 cut(s) 2267
HincII GTYRAC 4 cut(s) 43, 438, 2183, 2434
HindII GTYRAC 4 cut(s) 43, 438, 2183, 2434
HindIII AAGCTT 1 cut(s) 89
HpaI GTTAAC 1 cut(s) 43
HpaII CCGG 5 cut(s) 281, 1027, 1468, 2135, 2362
HphI GGTGA 6 cut(s) 1292, 1493, 1820, 2122, 2149, 2583
Hpy99I CGWCG 3 cut(s) 115, 2775, 2996
HpyCH4III ACNGT 4 cut(s) 106, 546, 1420, 1534
HpyCH4IV ACGT 8 cut(s) 582, 765, 1007, 1616, 2007, 2646, 2770, 2960
HpyF10VI GCNNNNNNNGC 8 cut(s) 848, 1252, 1261, 1864, 2237, 2246, 2297, 2573
HpySE526I ACGT 8 cut(s) 582, 765, 1007, 1616, 2007, 2646, 2770, 2960
Hsp92I GRCGYC 1 cut(s) 1616
HspAI GCGC 1 cut(s) 2267
Kpn2I TCCGGA 2 cut(s) 1026, 1467
Ksp22I TGATCA 2 cut(s) 496, 2977
KspAI GTTAAC 1 cut(s) 43
Kzo9I GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
LguI GCTCTTC 1 cut(s) 2877
LmnI GCTCC 5 cut(s) 175, 753, 1051, 1400, 2557
Lsp1109I GCAGC 1 cut(s) 2536
LweI GCATC 7 cut(s) 49, 706, 951, 1426, 1612, 2278, 2576
MaeI CTAG 5 cut(s) 174, 456, 1770, 1916, 2396
MaeII ACGT 8 cut(s) 582, 765, 1007, 1616, 2007, 2646, 2770, 2960
MaeIII GTNAC 8 cut(s) 154, 254, 592, 868, 1170, 1280, 1928, 2063
MalI GATC 6 cut(s) 297, 498, 1494, 1644, 2474, 2979
MboI GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
MfeI CAATTG 1 cut(s) 2997
MhlI GDGCHC 2 cut(s) 618, 758
MlyI GAGTC 4 cut(s) 17, 1230, 1269, 1537
MmeI TCCRAC 2 cut(s) 1021, 1211
MroI TCCGGA 2 cut(s) 1026, 1467
MroXI GAANNNNTTC 2 cut(s) 147, 689
MspCI CTTAAG 4 cut(s) 1079, 1595, 2377, 2888
MspI CCGG 5 cut(s) 281, 1027, 1468, 2135, 2362
MspR9I CCNGG 7 cut(s) 507, 1049, 2135, 2242, 2288, 2362, 2859
MunI CAATTG 1 cut(s) 2997
Mva1269I GAATGC 1 cut(s) 1887
MvaI CCWGG 5 cut(s) 507, 1049, 2242, 2288, 2859
MvnI CGCG 1 cut(s) 1858
MwoI GCNNNNNNNGC 8 cut(s) 848, 1252, 1261, 1864, 2237, 2246, 2297, 2573
NciI CCSGG 2 cut(s) 2135, 2362
NcoI CCATGG 2 cut(s) 1938, 2969
NdeII GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
NlaIV GGNNCC 1 cut(s) 2133
NmuCI GTSAC 2 cut(s) 868, 1280
NruI TCGCGA 1 cut(s) 1858
NsbI TGCGCA 1 cut(s) 2268
NspI RCATGY 5 cut(s) 655, 1337, 2147, 2189, 2813
PagI TCATGA 2 cut(s) 1569, 1905
PceI AGGCCT 1 cut(s) 2100
PciI ACATGT 1 cut(s) 651
PciSI GCTCTTC 1 cut(s) 2877
PctI GAATGC 1 cut(s) 1887
PdmI GAANNNNTTC 2 cut(s) 147, 689
PfoI TCCNGGA 3 cut(s) 505, 1047, 2360
PkrI GCNGC 2 cut(s) 1602, 2551
PleI GAGTC 4 cut(s) 17, 1230, 1269, 1537
PpsI GAGTC 4 cut(s) 17, 1230, 1269, 1537
PscI ACATGT 1 cut(s) 651
PshBI ATTAAT 2 cut(s) 2199, 2367
Psp124BI GAGCTC 1 cut(s) 758
Psp6I CCWGG 5 cut(s) 505, 1047, 2240, 2286, 2857
PspEI GGTNACC 1 cut(s) 154
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 5 cut(s) 505, 1047, 2240, 2286, 2857
PspN4I GGNNCC 1 cut(s) 2133
PspPI GGNCC 4 cut(s) 1430, 1554, 1935, 2131
PstI CTGCAG 1 cut(s) 601
PstNI CAGNNNCTG 2 cut(s) 1439, 2033
RruI TCGCGA 1 cut(s) 1858
RsaI GTAC 2 cut(s) 31, 1632
RsaNI GTAC 2 cut(s) 30, 1631
SacI GAGCTC 1 cut(s) 758
SapI GCTCTTC 1 cut(s) 2877
SatI GCNGC 2 cut(s) 1601, 2550
Sau3AI GATC 6 cut(s) 295, 496, 1492, 1642, 2472, 2977
Sau96I GGNCC 4 cut(s) 1430, 1554, 1935, 2131
SchI GAGTC 4 cut(s) 17, 1230, 1269, 1537
ScrFI CCNGG 7 cut(s) 507, 1049, 2135, 2242, 2288, 2362, 2859
SduI GDGCHC 2 cut(s) 618, 758
SfaNI GCATC 7 cut(s) 49, 706, 951, 1426, 1612, 2278, 2576
SfcI CTRYAG 1 cut(s) 597
SinI GGWCC 2 cut(s) 1554, 2131
SmlI CTYRAG 8 cut(s) 634, 680, 1079, 1595, 2077, 2377, 2888, 3140
SmoI CTYRAG 8 cut(s) 634, 680, 1079, 1595, 2077, 2377, 2888, 3140
SseBI AGGCCT 1 cut(s) 2100
SsiI CCGC 4 cut(s) 534, 923, 1600, 3095
SspI AATATT 1 cut(s) 2085
SspMI CTAG 5 cut(s) 174, 456, 1770, 1916, 2396
SstI GAGCTC 1 cut(s) 758
StuI AGGCCT 1 cut(s) 2100
StyD4I CCNGG 7 cut(s) 505, 1047, 2133, 2240, 2286, 2360, 2857
StyI CCWWGG 3 cut(s) 1938, 2800, 2969
TaaI ACNGT 4 cut(s) 106, 546, 1420, 1534
TaiI ACGT 8 cut(s) 585, 768, 1010, 1619, 2010, 2649, 2773, 2963
TaqI TCGA 9 cut(s) 113, 758, 947, 1113, 1851, 2046, 2215, 2632, 2913
TatI WGTACW 1 cut(s) 1630
TauI GCSGC 1 cut(s) 1603
TscAI CASTG 9 cut(s) 549, 1042, 1166, 1200, 1405, 1556, 1617, 1839, 2644
TseFI GTSAC 2 cut(s) 868, 1280
TseI GCWGC 1 cut(s) 2549
Tsp45I GTSAC 2 cut(s) 868, 1280
TspGWI ACGGA 4 cut(s) 575, 798, 1289, 1798
TspRI CASTG 9 cut(s) 549, 1042, 1166, 1200, 1405, 1556, 1617, 1839, 2644
Vha464I CTTAAG 4 cut(s) 1079, 1595, 2377, 2888
VpaK11BI GGWCC 2 cut(s) 1554, 2131
VspI ATTAAT 2 cut(s) 2199, 2367
XapI RAATTY 5 cut(s) 146, 667, 936, 1699, 2596
XceI RCATGY 5 cut(s) 655, 1337, 2147, 2189, 2813
XcmI CCANNNNNNNNNTGG 2 cut(s) 268, 2308
XmiI GTMKAC 1 cut(s) 2226
XmnI GAANNNNTTC 2 cut(s) 147, 689
XspI CTAG 5 cut(s) 174, 456, 1770, 1916, 2396
ZraI GACGTC 1 cut(s) 1617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.