Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0008672

Physical Location & Seq

Genomic Coordinates Forward (+)

8202390 .. 8209799

Gene Structure 7410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g11620.23

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3039 bp

ATGTCTTATTCACATTCTGTGTTCTGTCCTGTCCTCCCCGTTGTCTTCTTCTCTCCCGCCACCTCTTCCACTAAAACCCTAAACCCTAAATTACCAGAGGCTTTACCAGTCACCAAAACTACCCCGTTTCAGCTCCCAGAGCAGAACCAAAGCCAGCGAAGAACAATGGAGCCCGCTACGCTGACGAACTCAATGGACCTAAAGATTGGGGAGCTCTTGAAAGAGGTCCAGCTCGACTATTCACCCGCATTCACCAAGGCCGTCGACGACGCCGTTTCATTCATCAAAAGAGCCATCGACAAAATCCCAGAAGGCCTCAATGTTACAGCTGATGAAGCGCGGGGATTCGTCAGGGACATTGGCGCTGACAAGGTCGAATTCGCGTTTAAGAAGCCGAAATCTATTGAAATTGGTGGGAGTTATGCCATACAGTGCGTTGTAAAACCTGAAGTTAATGTGGACCTCTTCGTTCGGATGCCCAAGGAGTGTTTCCATGAGAAAGACTATTTGAATTACCGGTACCATGCGAAAAGGTGCCTGTACCTTTGTGTAATAAAAAAGTTTTTGAAGTCTTCTTCATTAGTTGAATGGTCCACCTTACAGAATGAAGCCCGGAAACCTGTATTGATTGTCTATCCAGGCGTAAAACTTGTCGAAGTCCCTGAGTTTTGTGTAAGGATAATTCCTACAGCACCATCCCTTTTCAACATTCCAAAGTTGCACCTAGAGCGCAATAATGTTCGTGCTTTAAATCAAGGGGGAGTTCCTCAGGCTACTCCTAAGTACAATAGTAGTATTTTGGAAGACATGCTCATTGAAGATACTGAAGAAATTCTCAAGAAAACTTTTCTCGGGTGGAAAGAATTACAAGAGGCATTAATTTTGCTGAAGGTCTGGGCTCGTCGGAGGACACCAATATATGCTTATGATTGCTTGGGTGGATATCTGATCTCTGTCATTTTGTCATACCTTGTGGATAGGAATCGTATTAAAAAGTCAATGACGACAATGCACATATTCCGTTTTAGCCTGAGCTTCCTTGCCAATTCAGAACTTTGGAAACATGGGCTCTACTTTACACCGAAAGACCAAAAAGCTATTCCAAAGGAGAAAAGGTTGCCTCTTAAAGAATCATTTCCAGTTGTTATATGTAGTCCAGCTACAAACTTTAATTTGGCCTTCCGAATGACAAGGGCTGGATTTCTCGAGCTCCAAGATGAGTCTGCTTCGACACTTACATGCATAGACAAATGTAGAGATGGTGGATTTGAGGAAATTTTTATGACCACGGTGGACTATCCTGTAAAATATGACCACATCATAAGGTTGAACTTAAAGGGGAACAGTGCAGTTTATGCATCAGGATTCTGCTTGGACGATGAATGTTGGAGATTATATGAGCAGAAGGTGCAGAGTGTTTTAATTCAAGGGTTGAGTGACAGAGTGAAGAATGTACGTGTTACCTGGAGAAATATGTTATCAGACCGCATCATAAAAAATGGATTGTCAACCCTCAATGCGGAGCCATTGCTTATTGGAATTTCCGTAAGCTCCATAGAGAAAGCTTTTAGGCTTGTTGATATTGGTCCAGATGCTGATAACAAAGCGGAGGCCCTCAAATTCCGCAAGTTCTGGGGGGAAAAGTCTGAGCTCAGGAGATTTAAAGATGGTAAAATTGCAGAAAGCACAGATCCTGTATCATCTTCTGGGAATTTGCTTGGGGCATTTGAAATTCTATCGAAGCGCTTGCGGCTTCTTGAAGACATTCCACTGAAGGTTTCTACTGTGCAGCCCCTAGATTCAGCTTTCAGGTTTTCTTCTGTATTCCCACCTGAACCTCATCCGCTTGCTAATGAGAAGGGTGCTTTTGTAAGATTACATAGGTTCACTCCTTCCTGCATTCGTCCGCTGGAAGTTATGATCCAGTTGGAAGGTTCTGGAAACTGGCCAATGGATGATCTAGCAATTGAGAAAACTAAATCTGCCTTCCTTCTCAAGATTGGAGAGAGTCTCCAGAATAATTGGGGGATGACGTGTACAGCTACGGAGGATGATGTGGATGTTTTTGTTTCTGGATATGCATTTCGCCTAAAAATTTGGCATGAGAGAGGCCTGACTTTGTTGAGACGGGAAACTGGAAATGATCTAGTGAAGCAGGTCTCTAATACGGACAGAGAACTTTATTTCCGGAGTCAACATTCCAGCATGATTAATGGATTACAGGGTTGTTATGCAGCATACGGGCCAGTTGTTAGGCTTGCAAAACGGTGGGTAGCTTCACATCTGTTTTCGGCTTGCTTGGGGGAGGAGGCAATTGAACTATTGGTTGCATACGTCTTTTTGAAGCCTTTACCATTCAATGCTCCATGCTCACGAATCACTGGATTTTTGAGGTTCCTACGATTACTATCAGATTATGACTGGAATTTTTCTGCATTAATTGTTGACATAAACAACGATTTGACTCCAAAAGATATGCAAGAGATAAATGATAATTTCATGTCAAGTAGAAAAACTAACGAAGAAAATGTGCTAAGTGTAATCCCAGCAATGTTCTTGGCTACAACTTATGACAAGGCATCTGAGGCCTGGACCAGATTCTCACCAAACTTGATGGAGTTAAAAAGGTTGATGGCTTATGCTGGAAGCAGTGCAAAGTTGTTGACCAAACTGATATCGGAGGATCATGATGATAAGCATAGATGGGAGTGCCTTTTTCGAACTCCTTTGAACAATTATGACGCAGTTATTCTTCTTCACAGAGAAAAATTACCTTACCCCCAACATCTTCTCTTTCCATCCGAATTAAATCAAGGTGCAGGGGTACATGTGGCATGTGGGAATGCGAGCAACGTTTTCCACCCATTTCTGTTGCCTGGAGACATGAAAGGAAATTCGGAGGCACTAAGAAATAAGCTATTGGTAAACTTTGATCCACTGAGGTGCTATGTCGGGGATCTAGAGGCAAGTTTTATAAAGAGTACCCCAACACCTTCAAGCTATGGTATGATTCTCTGGGAGGTGATGCTGTTGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Nrap Nrap_D2 Nrap_D3 Nrap_D4 Nrap_D5 Nrap_D6

Protein Analysis

1013

Amino Acids

114.85

Weight (kDa)

8.52

Isoelectric Point (pI)

44.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63810 AT1G63810
fragaria_vesca	FvH4_1g13250 FvH4_1g13250
malus_domestica	MD02G1146900.v1.1 MD15G1261100.v1.1
prunus_persica	Prupe.7G155300_v2.0.a1 Prupe.7G155300_v2.0.a1 Prupe.7G155300_v2.0.a1
pyrus_communis	pycom02g11620 pycom15g22840 pycom15g22850
rosa_chinensis	RchiOBHm_Chr2g0101431 RchiOBHm_Chr2g0101471
rosa_laevigata	RLG00000017080
rosa_multiflora	Rmu_sc0006153.1_g000056
rosa_roxburghii	Rroxscaffold_2G00141310
rosa_rugosa	Rorug02G0098300
rosa_samantha	Rh2AG147000 Rh2BG152300 Rh2CG152800 Rh2DG152400
rosa_wichuraiana	Rw2G011460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2975
Acc36I	ACCTGC	1 cut(s)	2146
Acc65I	GGTACC	1 cut(s)	519
AccB1I	GGYRCC	2 cut(s)	519, 534
AccI	GTMKAC	1 cut(s)	264
AccII	CGCG	2 cut(s)	340, 383
AccIII	TCCGGA	1 cut(s)	2187
AclI	AACGTT	1 cut(s)	2853
AclWI	GGATC	5 cut(s)	1685, 1915, 2691, 2927, 2964
AcoI	YGGCCR	1 cut(s)	1946
AcuI	CTGAAG	4 cut(s)	468, 846, 908, 1793
AcyI	GRCGYC	1 cut(s)	270
AfaI	GTAC	7 cut(s)	521, 542, 785, 1455, 2038, 2826, 2983
AfeI	AGCGCT	1 cut(s)	1745
AfiI	CCNNNNNNNGG	1 cut(s)	1519
AflIII	ACRYGT	3 cut(s)	1456, 2033, 2827
AgeI	ACCGGT	1 cut(s)	516
AjiI	CACGTC	1 cut(s)	2034
AjnI	CCWGG	4 cut(s)	637, 1463, 2588, 2875
AjuI	GAANNNNNNNTTGG	4 cut(s)	473, 505, 1083, 1115
AleI	CACNNNNGTG	1 cut(s)	2941
AloI	GAACNNNNNNTCC	2 cut(s)	2169, 2201
Alw21I	GWGCWC	3 cut(s)	216, 1212, 1653
Alw26I	GTCTC	4 cut(s)	2015, 2119, 2164, 2874
AlwI	GGATC	5 cut(s)	1685, 1915, 2691, 2927, 2964
AlwNI	CAGNNNCTG	2 cut(s)	1595, 1694
Ama87I	CYCGRG	2 cut(s)	851, 1205
Aor13HI	TCCGGA	1 cut(s)	2187
Aor51HI	AGCGCT	1 cut(s)	1745
AoxI	GGCC	8 cut(s)	258, 313, 1176, 1611, 1946, 2110, 2243, 2586
ApeKI	GCWGC	2 cut(s)	1789, 2234
AseI	ATTAAT	3 cut(s)	878, 2211, 2438
AsiGI	ACCGGT	1 cut(s)	516
Asp700I	GAANNNNTTC	3 cut(s)	831, 1134, 1764
Asp718I	GGTACC	1 cut(s)	519
AspLEI	GCGC	4 cut(s)	340, 365, 732, 1746
AspS9I	GGNCC	8 cut(s)	196, 226, 460, 591, 1586, 1612, 2243, 2592
AsuC2I	CCSGG	1 cut(s)	613
AsuHPI	GGTGA	5 cut(s)	103, 234, 244, 2595, 3034
AsuII	TTCGAA	1 cut(s)	2719
AvaI	CYCGRG	2 cut(s)	851, 1205
AvaII	GGWCC	6 cut(s)	196, 226, 460, 591, 1586, 2592
AxyI	CCTNAGG	1 cut(s)	768
BalI	TGGCCA	1 cut(s)	1948
BanI	GGYRCC	2 cut(s)	519, 534
BanII	GRGCYC	6 cut(s)	174, 216, 901, 1071, 1212, 1653
BbsI	GAAGAC	4 cut(s)	37, 564, 810, 1767
Bbv12I	GWGCWC	3 cut(s)	216, 1212, 1653
BbvI	GCAGC	2 cut(s)	1801, 2246
BccI	CCATC	8 cut(s)	302, 703, 1253, 1661, 2608, 2626, 2697, 2806
BceAI	ACGGC	2 cut(s)	245, 257
BcgI	CGANNNNNNTGC	2 cut(s)	1729, 1763
BciT130I	CCWGG	4 cut(s)	639, 1465, 2590, 2877
BcnI	CCSGG	1 cut(s)	613
BcoDI	GTCTC	4 cut(s)	2015, 2119, 2164, 2874
BfaI	CTAG	5 cut(s)	725, 1796, 1961, 2147, 2960
BfmI	CTRYAG	1 cut(s)	687
BfoI	RGCGCY	2 cut(s)	366, 1747
BfuAI	ACCTGC	1 cut(s)	2146
BisI	GCNGC	3 cut(s)	1751, 1790, 2235
BlsI	GCNGC	3 cut(s)	1752, 1791, 2236
Bme1390I	CCNGG	5 cut(s)	613, 639, 1465, 2590, 2877
Bme18I	GGWCC	6 cut(s)	196, 226, 460, 591, 1586, 2592
BmeT110I	CYCGRG	2 cut(s)	851, 1205
BmgBI	CACGTC	1 cut(s)	2034
BmgT120I	GGNCC	8 cut(s)	196, 226, 460, 591, 1586, 1612, 2243, 2592
BmiI	GGNNCC	5 cut(s)	171, 521, 536, 1524, 2396
BmrFI	CCNGG	5 cut(s)	613, 639, 1465, 2590, 2877
BmsI	GCATC	6 cut(s)	465, 1367, 1497, 1582, 2588, 3015
BpiI	GAAGAC	4 cut(s)	37, 564, 810, 1767
BplI	GAGNNNNNCTC	2 cut(s)	1995, 2027
BpmI	CTGGAG	3 cut(s)	1486, 1997, 2898
Bpu10I	CCTNAGC	2 cut(s)	1031, 1652
Bpu14I	TTCGAA	1 cut(s)	2719
BpuEI	CTTGAG	2 cut(s)	821, 1979
BpuMI	CCSGG	1 cut(s)	613
BsaAI	YACGTR	1 cut(s)	1457
BsaBI	GATNNNNATC	2 cut(s)	981, 2407
BsaHI	GRCGYC	1 cut(s)	270
BsaI	GGTCTC	1 cut(s)	2164
BsaJI	CCNNGG	3 cut(s)	255, 480, 1287
BsaWI	WCCGGW	2 cut(s)	516, 2187
BsaXI	ACNNNNNCTCC	2 cut(s)	1100, 1130
Bsc4I	CCNNNNNNNGG	1 cut(s)	1519
Bse118I	RCCGGY	1 cut(s)	516
Bse1I	ACTGG	8 cut(s)	107, 1139, 1924, 1949, 2140, 2246, 2386, 2426
Bse21I	CCTNAGG	1 cut(s)	768
Bse3DI	GCAATG	2 cut(s)	1526, 2556
Bse8I	GATNNNNATC	2 cut(s)	981, 2407
BseAI	TCCGGA	1 cut(s)	2187
BseBI	CCWGG	4 cut(s)	639, 1465, 2590, 2877
BseDI	CCNNGG	3 cut(s)	255, 480, 1287
BseGI	GGATG	8 cut(s)	480, 695, 1840, 1960, 2034, 2056, 2065, 2798
BseJI	GATNNNNATC	2 cut(s)	981, 2407
BseLI	CCNNNNNNNGG	1 cut(s)	1519
BseMI	GCAATG	2 cut(s)	1526, 2556
BseMII	CTCAG	7 cut(s)	654, 782, 1022, 1638, 1666, 2574, 2930
BseNI	ACTGG	8 cut(s)	107, 1139, 1924, 1949, 2140, 2246, 2386, 2426
BseRI	GAGGAG	1 cut(s)	2321
BseXI	GCAGC	2 cut(s)	1801, 2246
BseYI	CCCAGC	1 cut(s)	2545
BsgI	GTGCAG	4 cut(s)	1368, 1430, 1808, 2838
Bsh1236I	CGCG	2 cut(s)	340, 383
BshFI	GGCC	8 cut(s)	260, 315, 1178, 1613, 1948, 2112, 2245, 2588
BshNI	GGYRCC	2 cut(s)	519, 534
BshTI	ACCGGT	1 cut(s)	516
BsiHKAI	GWGCWC	3 cut(s)	216, 1212, 1653
BsiHKCI	CYCGRG	2 cut(s)	851, 1205
BsiSI	CCGG	3 cut(s)	517, 613, 2188
BslFI	GGGAC	2 cut(s)	368, 644
BslI	CCNNNNNNNGG	1 cut(s)	1519
BsmAI	GTCTC	4 cut(s)	2015, 2119, 2164, 2874
BsmBI	CGTCTC	1 cut(s)	2119
BsmFI	GGGAC	2 cut(s)	368, 644
BsmI	GAATGC	3 cut(s)	248, 1899, 2848
BsnI	GGCC	8 cut(s)	260, 315, 1178, 1613, 1948, 2112, 2245, 2588
Bso31I	GGTCTC	1 cut(s)	2164
BsoBI	CYCGRG	2 cut(s)	851, 1205
Bsp119I	TTCGAA	1 cut(s)	2719
Bsp1286I	GDGCHC	6 cut(s)	174, 216, 901, 1071, 1212, 1653
Bsp13I	TCCGGA	1 cut(s)	2187
Bsp1407I	TGTACA	1 cut(s)	2036
Bsp143I	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
BspANI	GGCC	8 cut(s)	260, 315, 1178, 1613, 1948, 2112, 2245, 2588
BspCNI	CTCAG	7 cut(s)	655, 781, 1023, 1639, 1665, 2575, 2931
BspEI	TCCGGA	1 cut(s)	2187
BspFNI	CGCG	2 cut(s)	340, 383
BspHI	TCATGA	1 cut(s)	2686
BspLI	GGNNCC	5 cut(s)	171, 521, 536, 1524, 2396
BspMI	ACCTGC	1 cut(s)	2146
BspPI	GGATC	5 cut(s)	1685, 1915, 2691, 2927, 2964
BspT104I	TTCGAA	1 cut(s)	2719
BspT107I	GGYRCC	2 cut(s)	519, 534
BspTNI	GGTCTC	1 cut(s)	2164
BsrDI	GCAATG	2 cut(s)	1526, 2556
BsrFI	RCCGGY	1 cut(s)	516
BsrGI	TGTACA	1 cut(s)	2036
BsrI	ACTGG	8 cut(s)	107, 1139, 1924, 1949, 2140, 2246, 2386, 2426
BssAI	RCCGGY	1 cut(s)	516
BssECI	CCNNGG	3 cut(s)	255, 480, 1287
BssMI	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
BssNI	GRCGYC	1 cut(s)	270
BssT1I	CCWWGG	2 cut(s)	255, 480
Bst2UI	CCWGG	4 cut(s)	639, 1465, 2590, 2877
Bst4CI	ACNGT	5 cut(s)	432, 1291, 1346, 1786, 2268
Bst6I	CTCTTC	2 cut(s)	70, 470
BstACI	GRCGYC	1 cut(s)	270
BstAPI	GCANNNNNTGC	2 cut(s)	1355, 1408
BstAUI	TGTACA	1 cut(s)	2036
BstBAI	YACGTR	1 cut(s)	1457
BstBI	TTCGAA	1 cut(s)	2719
BstC8I	GCNNGC	7 cut(s)	155, 174, 1748, 1848, 2259, 2296, 2848
BstDSI	CCRYGG	1 cut(s)	1287
BstF5I	GGATG	8 cut(s)	480, 695, 1840, 1960, 2034, 2056, 2065, 2798
BstFNI	CGCG	2 cut(s)	340, 383
BstH2I	RGCGCY	2 cut(s)	366, 1747
BstHHI	GCGC	4 cut(s)	340, 365, 732, 1746
BstKTI	GATC	8 cut(s)	951, 1693, 1923, 1960, 2146, 2686, 2935, 2959
BstMAI	GTCTC	4 cut(s)	2015, 2119, 2164, 2874
BstMBI	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
BstMWI	GCNNNNNNNGC	8 cut(s)	139, 178, 335, 727, 1355, 1408, 1750, 2585
BstNI	CCWGG	4 cut(s)	639, 1465, 2590, 2877
BstNSI	RCATGY	4 cut(s)	811, 1242, 2831, 2838
BstSCI	CCNGG	5 cut(s)	611, 637, 1463, 2588, 2875
BstSFI	CTRYAG	1 cut(s)	687
BstUI	CGCG	2 cut(s)	340, 383
BstV1I	GCAGC	2 cut(s)	1801, 2246
BstV2I	GAAGAC	4 cut(s)	37, 564, 810, 1767
BstX2I	RGATCY	2 cut(s)	1690, 2956
BstYI	RGATCY	2 cut(s)	1690, 2956
Bsu36I	CCTNAGG	1 cut(s)	768
BsuRI	GGCC	8 cut(s)	260, 315, 1178, 1613, 1948, 2112, 2245, 2588
BtgI	CCRYGG	1 cut(s)	1287
BtrI	CACGTC	1 cut(s)	2034
BtsCI	GGATG	8 cut(s)	480, 695, 1840, 1960, 2034, 2056, 2065, 2798
BtsI	GCAGTG	1 cut(s)	2656
BtsIMutI	CAGTG	6 cut(s)	437, 1351, 1769, 2379, 2656, 2936
BveI	ACCTGC	1 cut(s)	2146
Cac8I	GCNNGC	7 cut(s)	155, 174, 1748, 1848, 2259, 2296, 2848
CaiI	CAGNNNCTG	2 cut(s)	1595, 1694
CciI	TCATGA	1 cut(s)	2686
CfoI	GCGC	4 cut(s)	340, 365, 732, 1746
Cfr10I	RCCGGY	1 cut(s)	516
Cfr13I	GGNCC	8 cut(s)	196, 226, 460, 591, 1586, 1612, 2243, 2592
CseI	GACGC	2 cut(s)	278, 2750
Csp6I	GTAC	7 cut(s)	520, 541, 784, 1454, 2037, 2825, 2982
CspAI	ACCGGT	1 cut(s)	516
CviQI	GTAC	7 cut(s)	520, 541, 784, 1454, 2037, 2825, 2982
DpnI	GATC	8 cut(s)	950, 1692, 1922, 1959, 2145, 2685, 2934, 2958
DpnII	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
DraI	TTTAAA	2 cut(s)	750, 1663
EaeI	YGGCCR	1 cut(s)	1946
Eam1104I	CTCTTC	2 cut(s)	70, 470
EarI	CTCTTC	2 cut(s)	70, 470
Ecl136II	GAGCTC	3 cut(s)	214, 1210, 1651
Eco130I	CCWWGG	2 cut(s)	255, 480
Eco147I	AGGCCT	3 cut(s)	315, 2112, 2588
Eco24I	GRGCYC	6 cut(s)	174, 216, 901, 1071, 1212, 1653
Eco31I	GGTCTC	1 cut(s)	2164
Eco32I	GATATC	2 cut(s)	944, 2676
Eco47I	GGWCC	6 cut(s)	196, 226, 460, 591, 1586, 2592
Eco47III	AGCGCT	1 cut(s)	1745
Eco53kI	GAGCTC	3 cut(s)	214, 1210, 1651
Eco57I	CTGAAG	4 cut(s)	468, 846, 908, 1793
Eco81I	CCTNAGG	1 cut(s)	768
Eco88I	CYCGRG	2 cut(s)	851, 1205
EcoICRI	GAGCTC	3 cut(s)	214, 1210, 1651
EcoO109I	RGGNCCY	1 cut(s)	1612
EcoRI	GAATTC	1 cut(s)	377
EcoRII	CCWGG	4 cut(s)	637, 1463, 2588, 2875
EcoRV	GATATC	2 cut(s)	944, 2676
EcoT14I	CCWWGG	2 cut(s)	255, 480
EcoT22I	ATGCAT	3 cut(s)	1244, 1360, 2083
EcoT38I	GRGCYC	6 cut(s)	174, 216, 901, 1071, 1212, 1653
ErhI	CCWWGG	2 cut(s)	255, 480
Esp3I	CGTCTC	1 cut(s)	2119
FaqI	GGGAC	2 cut(s)	368, 644
FauI	CCCGC	4 cut(s)	64, 181, 253, 333
FblI	GTMKAC	1 cut(s)	264
Fnu4HI	GCNGC	3 cut(s)	1751, 1790, 2235
FokI	GGATG	8 cut(s)	487, 682, 1827, 1967, 2041, 2063, 2072, 2785
FriOI	GRGCYC	6 cut(s)	174, 216, 901, 1071, 1212, 1653
Fsp4HI	GCNGC	3 cut(s)	1751, 1790, 2235
FspBI	CTAG	5 cut(s)	725, 1796, 1961, 2147, 2960
GlaI	GCGC	4 cut(s)	339, 364, 731, 1745
GluI	GCNGC	3 cut(s)	1751, 1790, 2235
GsaI	CCCAGC	1 cut(s)	2549
GsuI	CTGGAG	3 cut(s)	1486, 1997, 2898
HaeII	RGCGCY	2 cut(s)	366, 1747
HaeIII	GGCC	8 cut(s)	260, 315, 1178, 1613, 1948, 2112, 2245, 2588
HapII	CCGG	3 cut(s)	517, 613, 2188
HgaI	GACGC	2 cut(s)	278, 2750
HhaI	GCGC	4 cut(s)	340, 365, 732, 1746
Hin1I	GRCGYC	1 cut(s)	270
Hin6I	GCGC	4 cut(s)	338, 363, 730, 1744
HinP1I	GCGC	4 cut(s)	338, 363, 730, 1744
HincII	GTYRAC	5 cut(s)	265, 1509, 2195, 2446, 2664
HindII	GTYRAC	5 cut(s)	265, 1509, 2195, 2446, 2664
HindIII	AAGCTT	1 cut(s)	1563
HpaII	CCGG	3 cut(s)	517, 613, 2188
HphI	GGTGA	5 cut(s)	103, 234, 244, 2595, 3034
Hpy99I	CGWCG	4 cut(s)	266, 269, 272, 906
HpyCH4III	ACNGT	5 cut(s)	432, 1291, 1346, 1786, 2268
HpyCH4IV	ACGT	4 cut(s)	1456, 2033, 2334, 2853
HpyF10VI	GCNNNNNNNGC	8 cut(s)	139, 178, 335, 727, 1355, 1408, 1750, 2585
HpySE526I	ACGT	4 cut(s)	1456, 2033, 2334, 2853
Hsp92I	GRCGYC	1 cut(s)	270
HspAI	GCGC	4 cut(s)	338, 363, 730, 1744
Kpn2I	TCCGGA	1 cut(s)	2187
KpnI	GGTACC	1 cut(s)	523
Kzo9I	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
LmnI	GCTCC	7 cut(s)	138, 169, 211, 1215, 1522, 1556, 2368
Lsp1109I	GCAGC	2 cut(s)	1801, 2246
LweI	GCATC	6 cut(s)	465, 1367, 1497, 1582, 2588, 3015
MaeI	CTAG	5 cut(s)	725, 1796, 1961, 2147, 2960
MaeII	ACGT	4 cut(s)	1456, 2033, 2334, 2853
MaeIII	GTNAC	4 cut(s)	109, 322, 1436, 1459
MalI	GATC	8 cut(s)	950, 1692, 1922, 1959, 2145, 2685, 2934, 2958
MboI	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
MfeI	CAATTG	2 cut(s)	1965, 2313
MflI	RGATCY	2 cut(s)	1690, 2956
MhlI	GDGCHC	6 cut(s)	174, 216, 901, 1071, 1212, 1653
MlsI	TGGCCA	1 cut(s)	1948
MluNI	TGGCCA	1 cut(s)	1948
MlyI	GAGTC	4 cut(s)	1229, 2017, 2200, 2458
MmeI	TCCRAC	3 cut(s)	884, 1367, 1908
Mox20I	TGGCCA	1 cut(s)	1948
Mph1103I	ATGCAT	3 cut(s)	1244, 1360, 2083
MroI	TCCGGA	1 cut(s)	2187
MroXI	GAANNNNTTC	3 cut(s)	831, 1134, 1764
MscI	TGGCCA	1 cut(s)	1948
MslI	CAYNNNNRTG	2 cut(s)	1237, 2941
Msp20I	TGGCCA	1 cut(s)	1948
MspA1I	CMGCKG	2 cut(s)	329, 1909
MspI	CCGG	3 cut(s)	517, 613, 2188
MspR9I	CCNGG	5 cut(s)	613, 639, 1465, 2590, 2877
MunI	CAATTG	2 cut(s)	1965, 2313
Mva1269I	GAATGC	3 cut(s)	248, 1899, 2848
MvaI	CCWGG	4 cut(s)	639, 1465, 2590, 2877
MvnI	CGCG	2 cut(s)	340, 383
MwoI	GCNNNNNNNGC	8 cut(s)	139, 178, 335, 727, 1355, 1408, 1750, 2585
NciI	CCSGG	1 cut(s)	613
NdeII	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
NlaIV	GGNNCC	5 cut(s)	171, 521, 536, 1524, 2396
NmuCI	GTSAC	2 cut(s)	109, 1436
NsiI	ATGCAT	3 cut(s)	1244, 1360, 2083
NspI	RCATGY	4 cut(s)	811, 1242, 2831, 2838
NspV	TTCGAA	1 cut(s)	2719
OliI	CACNNNNGTG	1 cut(s)	2941
PaeR7I	CTCGAG	1 cut(s)	1205
PagI	TCATGA	1 cut(s)	2686
PceI	AGGCCT	3 cut(s)	315, 2112, 2588
PciI	ACATGT	1 cut(s)	2827
PcsI	WCGNNNNNNNCGW	1 cut(s)	270
PctI	GAATGC	3 cut(s)	248, 1899, 2848
PdmI	GAANNNNTTC	3 cut(s)	831, 1134, 1764
PfeI	GAWTC	8 cut(s)	345, 982, 1130, 1365, 1799, 2376, 2598, 3010
PflFI	GACNNNGTC	1 cut(s)	371
PinAI	ACCGGT	1 cut(s)	516
PkrI	GCNGC	3 cut(s)	1752, 1791, 2236
PleI	GAGTC	4 cut(s)	1228, 2016, 2199, 2458
PpsI	GAGTC	4 cut(s)	1228, 2016, 2199, 2458
Ppu21I	YACGTR	1 cut(s)	1457
PscI	ACATGT	1 cut(s)	2827
PshBI	ATTAAT	3 cut(s)	878, 2211, 2438
PsiI	TTATAA	1 cut(s)	2975
Psp124BI	GAGCTC	3 cut(s)	216, 1212, 1653
Psp1406I	AACGTT	1 cut(s)	2853
Psp6I	CCWGG	4 cut(s)	637, 1463, 2588, 2875
PspFI	CCCAGC	1 cut(s)	2545
PspGI	CCWGG	4 cut(s)	637, 1463, 2588, 2875
PspN4I	GGNNCC	5 cut(s)	171, 521, 536, 1524, 2396
PspPI	GGNCC	8 cut(s)	196, 226, 460, 591, 1586, 1612, 2243, 2592
PstNI	CAGNNNCTG	2 cut(s)	1595, 1694
PsuI	RGATCY	2 cut(s)	1690, 2956
PsyI	GACNNNGTC	1 cut(s)	371
PvuII	CAGCTG	1 cut(s)	329
RsaI	GTAC	7 cut(s)	521, 542, 785, 1455, 2038, 2826, 2983
RsaNI	GTAC	7 cut(s)	520, 541, 784, 1454, 2037, 2825, 2982
RseI	CAYNNNNRTG	2 cut(s)	1237, 2941
SacI	GAGCTC	3 cut(s)	216, 1212, 1653
SalI	GTCGAC	1 cut(s)	263
SatI	GCNGC	3 cut(s)	1751, 1790, 2235
Sau3AI	GATC	8 cut(s)	948, 1690, 1920, 1957, 2143, 2683, 2932, 2956
Sau96I	GGNCC	8 cut(s)	196, 226, 460, 591, 1586, 1612, 2243, 2592
SchI	GAGTC	4 cut(s)	1229, 2017, 2200, 2458
ScrFI	CCNGG	5 cut(s)	613, 639, 1465, 2590, 2877
SduI	GDGCHC	6 cut(s)	174, 216, 901, 1071, 1212, 1653
SfaNI	GCATC	6 cut(s)	465, 1367, 1497, 1582, 2588, 3015
SfcI	CTRYAG	1 cut(s)	687
Sfr274I	CTCGAG	1 cut(s)	1205
SfuI	TTCGAA	1 cut(s)	2719
SgrDI	CGTCGACG	1 cut(s)	263
SinI	GGWCC	6 cut(s)	196, 226, 460, 591, 1586, 2592
SlaI	CTCGAG	1 cut(s)	1205
SmiMI	CAYNNNNRTG	2 cut(s)	1237, 2941
SmlI	CTYRAG	3 cut(s)	836, 1205, 1994
SmoI	CTYRAG	3 cut(s)	836, 1205, 1994
SseBI	AGGCCT	3 cut(s)	315, 2112, 2588
SspMI	CTAG	5 cut(s)	725, 1796, 1961, 2147, 2960
SstI	GAGCTC	3 cut(s)	216, 1212, 1653
StuI	AGGCCT	3 cut(s)	315, 2112, 2588
StyD4I	CCNGG	5 cut(s)	611, 637, 1463, 2588, 2875
StyI	CCWWGG	2 cut(s)	255, 480
TaaI	ACNGT	5 cut(s)	432, 1291, 1346, 1786, 2268
TaiI	ACGT	4 cut(s)	1459, 2036, 2337, 2856
TaqI	TCGA	9 cut(s)	234, 264, 297, 375, 654, 1206, 1229, 1739, 2719
TatI	WGTACW	2 cut(s)	783, 2036
TauI	GCSGC	1 cut(s)	1753
TfiI	GAWTC	8 cut(s)	345, 982, 1130, 1365, 1799, 2376, 2598, 3010
TscAI	CASTG	6 cut(s)	437, 1351, 1776, 2386, 2656, 2943
TseFI	GTSAC	2 cut(s)	109, 1436
TseI	GCWGC	2 cut(s)	1789, 2234
Tsp45I	GTSAC	2 cut(s)	109, 1436
TspDTI	ATGAA	8 cut(s)	267, 271, 348, 567, 621, 1395, 2488, 2900
TspGWI	ACGGA	4 cut(s)	1010, 1534, 2060, 2183
TspRI	CASTG	6 cut(s)	437, 1351, 1776, 2386, 2656, 2943
Tth111I	GACNNNGTC	1 cut(s)	371
VpaK11BI	GGWCC	6 cut(s)	196, 226, 460, 591, 1586, 2592
VspI	ATTAAT	3 cut(s)	878, 2211, 2438
XbaI	TCTAGA	1 cut(s)	2959
XceI	RCATGY	4 cut(s)	811, 1242, 2831, 2838
XhoI	CTCGAG	1 cut(s)	1205
XmiI	GTMKAC	1 cut(s)	264
XmnI	GAANNNNTTC	3 cut(s)	831, 1134, 1764
XspI	CTAG	5 cut(s)	725, 1796, 1961, 2147, 2960
Zsp2I	ATGCAT	3 cut(s)	1244, 1360, 2083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.