AT1G63855

Lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007936
Physical Location & Seq
Reverse (-)
23699369 .. 23701013
1645 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G63855.6

Sequence Viewer

Length: 480 bp
ATGATGACTACTACGACGACGACGATTTCTCAGCATAACTTCTATGGTGCTGGAGATTCGGAAACTTGCATTTCTATTATTGAGAATTTGAAGGAAGAGTATGGATTGTTTGTTTGGCCTTGTAGCGTTATCCTCGCTGAGTATGTTTGGCAACACAGATCTCGATTTCGTGATTCTTCGATACTCGAGCTAGGAGCTGGTACTTCCTTGCCTGGTTTAGTAGCTGCAAAGGTTGGGGCTAATGTCACTCTTACTGATGATGCAACTAAACCAGAGGTTTTGGATAATATGAGAAGAGTCTGTGAGCTTAACAAGCTGAACTGTAATGTGTTGGGTCTCACCTGGGGTGTGTGGGATGCACCGATACTCGACCTGCGACCAAACATTATACTTGGGGCTGATGTTTTATATGATTCAAGTGGTTCGTTTCATTTGTTTTTGTTTTGGGTATTGGCCTTTTCTTTTTCCCCTTGTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

159

Amino Acids

17.65

Weight (kDa)

4.73

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 22 - 140 4.9e-15 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 381
AcsI RAATTY 1 cut(s) 85
AfaI GTAC 1 cut(s) 202
AgsI TTSAA 2 cut(s) 91, 417
AjnI CCWGG 2 cut(s) 211, 341
AluBI AGCT 5 cut(s) 190, 197, 224, 307, 316
AluI AGCT 5 cut(s) 190, 197, 224, 307, 316
Alw26I GTCTC 1 cut(s) 341
Ama87I CYCGRG 1 cut(s) 185
AoxI GGCC 2 cut(s) 116, 453
ApeKI GCWGC 1 cut(s) 224
ApoI RAATTY 1 cut(s) 85
AsuHPI GGTGA 1 cut(s) 331
AvaI CYCGRG 1 cut(s) 185
BbvI GCAGC 1 cut(s) 211
BciT130I CCWGG 2 cut(s) 213, 343
BcoDI GTCTC 1 cut(s) 341
BfaI CTAG 1 cut(s) 191
BfuAI ACCTGC 1 cut(s) 381
BglII AGATCT 1 cut(s) 158
BisI GCNGC 1 cut(s) 225
BlsI GCNGC 1 cut(s) 226
Bme1390I CCNGG 2 cut(s) 213, 343
BmeT110I CYCGRG 1 cut(s) 185
BmrFI CCNGG 2 cut(s) 213, 343
BmsI GCATC 2 cut(s) 250, 346
BpmI CTGGAG 1 cut(s) 72
BsaI GGTCTC 1 cut(s) 341
BsaJI CCNNGG 1 cut(s) 342
BseBI CCWGG 2 cut(s) 213, 343
BseDI CCNNGG 1 cut(s) 342
BseGI GGATG 1 cut(s) 361
BseMII CTCAG 2 cut(s) 44, 129
BseXI GCAGC 1 cut(s) 211
BshFI GGCC 2 cut(s) 118, 455
BsiHKCI CYCGRG 1 cut(s) 185
BsmAI GTCTC 1 cut(s) 341
BsnI GGCC 2 cut(s) 118, 455
Bso31I GGTCTC 1 cut(s) 341
BsoBI CYCGRG 1 cut(s) 185
Bsp143I GATC 1 cut(s) 158
BspANI GGCC 2 cut(s) 118, 455
BspCNI CTCAG 2 cut(s) 43, 130
BspMI ACCTGC 1 cut(s) 381
BspTNI GGTCTC 1 cut(s) 341
BssECI CCNNGG 1 cut(s) 342
BssMI GATC 1 cut(s) 158
Bst2UI CCWGG 2 cut(s) 213, 343
Bst4CI ACNGT 1 cut(s) 323
Bst6I CTCTTC 2 cut(s) 90, 289
BstDEI CTNAG 2 cut(s) 30, 138
BstF5I GGATG 1 cut(s) 361
BstKTI GATC 1 cut(s) 161
BstMAI GTCTC 1 cut(s) 341
BstMBI GATC 1 cut(s) 158
BstMWI GCNNNNNNNGC 1 cut(s) 313
BstNI CCWGG 2 cut(s) 213, 343
BstSCI CCNGG 2 cut(s) 211, 341
BstV1I GCAGC 1 cut(s) 211
BstX2I RGATCY 1 cut(s) 158
BstYI RGATCY 1 cut(s) 158
BsuRI GGCC 2 cut(s) 118, 455
BtsCI GGATG 1 cut(s) 361
BveI ACCTGC 1 cut(s) 381
Csp6I GTAC 1 cut(s) 201
CviJI RGCY 9 cut(s) 118, 190, 197, 224, 239, 307, 316, 398, 455
CviKI_1 RGCY 9 cut(s) 118, 190, 197, 224, 239, 307, 316, 398, 455
CviQI GTAC 1 cut(s) 201
DdeI CTNAG 2 cut(s) 30, 138
DpnI GATC 1 cut(s) 160
DpnII GATC 1 cut(s) 158
Eam1104I CTCTTC 2 cut(s) 90, 289
EarI CTCTTC 2 cut(s) 90, 289
Eco31I GGTCTC 1 cut(s) 341
Eco88I CYCGRG 1 cut(s) 185
EcoRII CCWGG 2 cut(s) 211, 341
FaiI YATR 8 cut(s) 36, 45, 102, 144, 290, 389, 409, 411
Fnu4HI GCNGC 1 cut(s) 225
FokI GGATG 1 cut(s) 368
Fsp4HI GCNGC 1 cut(s) 225
FspBI CTAG 1 cut(s) 191
GluI GCNGC 1 cut(s) 225
GsuI CTGGAG 1 cut(s) 72
HaeIII GGCC 2 cut(s) 118, 455
HinfI GANTC 4 cut(s) 56, 173, 297, 413
HphI GGTGA 1 cut(s) 331
Hpy188I TCNGA 1 cut(s) 61
Hpy188III TCNNGA 2 cut(s) 162, 170
Hpy99I CGWCG 3 cut(s) 19, 22, 25
HpyAV CCTTC 1 cut(s) 85
HpyCH4III ACNGT 1 cut(s) 323
HpyCH4V TGCA 4 cut(s) 69, 227, 263, 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 313
HpyF3I CTNAG 2 cut(s) 30, 138
Kzo9I GATC 1 cut(s) 158
LmnI GCTCC 1 cut(s) 194
LpnPI CCDG 8 cut(s) 36, 183, 198, 225, 285, 328, 355, 386
Lsp1109I GCAGC 1 cut(s) 211
LweI GCATC 2 cut(s) 250, 346
MaeI CTAG 1 cut(s) 191
MaeIII GTNAC 1 cut(s) 244
MalI GATC 1 cut(s) 160
MboI GATC 1 cut(s) 158
MboII GAAGA 3 cut(s) 107, 168, 306
MflI RGATCY 1 cut(s) 158
MluCI AATT 1 cut(s) 85
MlyI GAGTC 1 cut(s) 306
MnlI CCTC 2 cut(s) 143, 268
MseI TTAA 1 cut(s) 309
MspR9I CCNGG 2 cut(s) 213, 343
MvaI CCWGG 2 cut(s) 213, 343
MwoI GCNNNNNNNGC 1 cut(s) 313
NdeII GATC 1 cut(s) 158
NmuCI GTSAC 1 cut(s) 244
PaeR7I CTCGAG 1 cut(s) 185
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PfeI GAWTC 3 cut(s) 56, 173, 413
PkrI GCNGC 1 cut(s) 226
PleI GAGTC 1 cut(s) 305
PpsI GAGTC 1 cut(s) 305
Psp6I CCWGG 2 cut(s) 211, 341
PspGI CCWGG 2 cut(s) 211, 341
PspXI VCTCGAGB 1 cut(s) 185
PsuI RGATCY 1 cut(s) 158
RsaI GTAC 1 cut(s) 202
RsaNI GTAC 1 cut(s) 201
SaqAI TTAA 1 cut(s) 309
SatI GCNGC 1 cut(s) 225
Sau3AI GATC 1 cut(s) 158
SchI GAGTC 1 cut(s) 306
ScrFI CCNGG 2 cut(s) 213, 343
SetI ASST 9 cut(s) 192, 199, 226, 234, 279, 309, 318, 344, 375
SfaNI GCATC 2 cut(s) 250, 346
Sfr274I CTCGAG 1 cut(s) 185
SlaI CTCGAG 1 cut(s) 185
SmlI CTYRAG 1 cut(s) 185
SmoI CTYRAG 1 cut(s) 185
Sse9I AATT 1 cut(s) 85
SspMI CTAG 1 cut(s) 191
StyD4I CCNGG 2 cut(s) 211, 341
TaaI ACNGT 1 cut(s) 323
TaqI TCGA 4 cut(s) 163, 179, 186, 369
TasI AATT 1 cut(s) 85
TfiI GAWTC 3 cut(s) 56, 173, 413
Tru1I TTAA 1 cut(s) 309
Tru9I TTAA 1 cut(s) 309
TseFI GTSAC 1 cut(s) 244
TseI GCWGC 1 cut(s) 224
Tsp45I GTSAC 1 cut(s) 244
TspDTI ATGAA 1 cut(s) 419
XapI RAATTY 1 cut(s) 85
XhoI CTCGAG 1 cut(s) 185
XspI CTAG 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.