pycom15g21220

Methyltransferase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0007936
Physical Location & Seq
Reverse (-)
15227823 .. 15229716
1894 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g21220.1

Sequence Viewer

Length: 792 bp
ATGGCCTTTAAAAATTGGTTTTGCCTACATTTGACAGAGGCTTCTCCAACCCATTTCGTTCCCTTACCAGACTTACGCTGCTGCGGCAGCAACTACCTAGTTATGGAAGGAATTGACTCGCCCGATATGTCGACGGTATCGCGTCATCGTTTCGGGGACGACTCGGAAGAACCGGCCTTCTCCGTCTCCATCATCGAGAATATGAAGGAAGAGTACGGGCTCTTCGTGTGGCCCTGCAGCTTAGCCCTGGCGGAGTATGTTTGGCAACAGAGATTGCGCTTTTCGGGAGCTAGCGTAGTCGAGCTTGGCGCTGGAACTTCCTTGCCCGGTCTGGTTGCCGCCAGAGTTGGTGCTGACGTCACTCTCACTGATGATTCGAGTAGATTGGAGGTGCTGGACAACATGAGAAGAGTGCTCGACCTTAATAAACTTGAGTGCAATGTAATGGGATTGACATGGGGAGCTTGGGATGCATCAACGTTCAGCCTACACCCCAAATTTATTCTCGGGGCTGATGTATTGTATGATGCTAGTGCCTTTGATGACCTCTTTGCCACCGTGACATTTCTGCTCCGAAATTCTCCAGGGTCAGTCTTCATAACAACATACCATAATCGAAGCGGGCATCATCTTATTGAATTCTTGATGGTCAAATGGGGATTGAAGTGCTTGAAGCTTCTTGATGCCTTTTCATTTATGCCATCCTACAAGGCATCCAGGCTAAGTGGCAACCTTCAACTGGCAGAGATCGTTCTGGATAGCGAACAGGCTGAGACAACGGTTTTGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

264

Amino Acids

29.31

Weight (kDa)

5.03

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 62 - 207 1.1e-19 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 360
AccI GTMKAC 1 cut(s) 131
AccII CGCG 1 cut(s) 142
AciI CCGC 4 cut(s) 84, 251, 339, 621
AclI AACGTT 1 cut(s) 479
AcsI RAATTY 3 cut(s) 497, 577, 638
AcyI GRCGYC 1 cut(s) 357
AfaI GTAC 1 cut(s) 215
AfiI CCNNNNNNNGG 2 cut(s) 103, 739
AgsI TTSAA 4 cut(s) 638, 664, 673, 737
AjnI CCWGG 3 cut(s) 246, 583, 716
AluBI AGCT 5 cut(s) 240, 290, 304, 464, 676
AluI AGCT 5 cut(s) 240, 290, 304, 464, 676
Alw21I GWGCWC 1 cut(s) 417
Alw26I GTCTC 2 cut(s) 190, 767
Ama87I CYCGRG 1 cut(s) 506
AoxI GGCC 3 cut(s) 3, 174, 230
ApeKI GCWGC 4 cut(s) 78, 81, 87, 237
ApoI RAATTY 3 cut(s) 497, 577, 638
ArsI GACNNNNNNTTYG 1 cut(s) 766
AspLEI GCGC 2 cut(s) 279, 311
AspS9I GGNCC 1 cut(s) 231
AsuC2I CCSGG 1 cut(s) 327
AsuNHI GCTAGC 1 cut(s) 290
AvaI CYCGRG 1 cut(s) 506
BanII GRGCYC 1 cut(s) 222
BarI GAAGNNNNNNTAC 4 cut(s) 197, 206, 229, 238
BbsI GAAGAC 1 cut(s) 586
Bbv12I GWGCWC 1 cut(s) 417
BbvI GCAGC 4 cut(s) 65, 68, 99, 249
BccI CCATC 3 cut(s) 197, 640, 709
BciT130I CCWGG 3 cut(s) 248, 585, 718
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 2 cut(s) 190, 767
BfaI CTAG 3 cut(s) 98, 291, 531
BfmI CTRYAG 1 cut(s) 235
BfoI RGCGCY 1 cut(s) 312
BisI GCNGC 6 cut(s) 79, 82, 85, 88, 238, 339
BlpI GCTNAGC 1 cut(s) 241
BlsI GCNGC 6 cut(s) 80, 83, 86, 89, 239, 340
Bme1390I CCNGG 4 cut(s) 248, 327, 585, 718
BmeT110I CYCGRG 1 cut(s) 506
BmgT120I GGNCC 1 cut(s) 231
BmrFI CCNGG 4 cut(s) 248, 327, 585, 718
BmsI GCATC 6 cut(s) 460, 482, 517, 634, 673, 722
BmtI GCTAGC 1 cut(s) 294
BpiI GAAGAC 1 cut(s) 586
BpmI CTGGAG 1 cut(s) 567
Bpu1102I GCTNAGC 1 cut(s) 241
BpuEI CTTGAG 1 cut(s) 452
BpuMI CCSGG 1 cut(s) 327
BsaHI GRCGYC 1 cut(s) 357
BsaJI CCNNGG 2 cut(s) 246, 584
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 2 cut(s) 103, 739
Bse118I RCCGGY 1 cut(s) 172
Bse1I ACTGG 1 cut(s) 744
Bse3DI GCAATG 1 cut(s) 445
BseBI CCWGG 3 cut(s) 248, 585, 718
BseDI CCNNGG 2 cut(s) 246, 584
BseGI GGATG 3 cut(s) 475, 701, 713
BseLI CCNNNNNNNGG 2 cut(s) 103, 739
BseMI GCAATG 1 cut(s) 445
BseMII CTCAG 1 cut(s) 762
BseNI ACTGG 1 cut(s) 744
BseXI GCAGC 4 cut(s) 65, 68, 99, 249
Bsh1236I CGCG 1 cut(s) 142
BshFI GGCC 3 cut(s) 5, 176, 232
BsiHKAI GWGCWC 1 cut(s) 417
BsiHKCI CYCGRG 1 cut(s) 506
BsiSI CCGG 2 cut(s) 173, 327
BslFI GGGAC 1 cut(s) 170
BslI CCNNNNNNNGG 2 cut(s) 103, 739
BsmAI GTCTC 2 cut(s) 190, 767
BsmBI CGTCTC 1 cut(s) 190
BsmFI GGGAC 1 cut(s) 170
BsnI GGCC 3 cut(s) 5, 176, 232
BsoBI CYCGRG 1 cut(s) 506
Bsp1286I GDGCHC 2 cut(s) 222, 417
Bsp143I GATC 1 cut(s) 747
Bsp1720I GCTNAGC 1 cut(s) 241
BspACI CCGC 4 cut(s) 84, 251, 339, 621
BspANI GGCC 3 cut(s) 5, 176, 232
BspCNI CTCAG 1 cut(s) 763
BspFNI CGCG 1 cut(s) 142
BspMAI CTGCAG 1 cut(s) 239
BspOI GCTAGC 1 cut(s) 294
BspQI GCTCTTC 1 cut(s) 227
BsrDI GCAATG 1 cut(s) 445
BsrFI RCCGGY 1 cut(s) 172
BsrI ACTGG 1 cut(s) 744
BssAI RCCGGY 1 cut(s) 172
BssECI CCNNGG 2 cut(s) 246, 584
BssMI GATC 1 cut(s) 747
BssNI GRCGYC 1 cut(s) 357
Bst2UI CCWGG 3 cut(s) 248, 585, 718
Bst4CI ACNGT 3 cut(s) 136, 559, 781
Bst6I CTCTTC 3 cut(s) 204, 227, 403
BstACI GRCGYC 1 cut(s) 357
BstC8I GCNNGC 2 cut(s) 292, 623
BstDEI CTNAG 3 cut(s) 241, 722, 771
BstF5I GGATG 3 cut(s) 475, 701, 713
BstFNI CGCG 1 cut(s) 142
BstH2I RGCGCY 1 cut(s) 312
BstHHI GCGC 2 cut(s) 279, 311
BstKTI GATC 1 cut(s) 750
BstMAI GTCTC 2 cut(s) 190, 767
BstMBI GATC 1 cut(s) 747
BstMWI GCNNNNNNNGC 3 cut(s) 84, 87, 470
BstNI CCWGG 3 cut(s) 248, 585, 718
BstSCI CCNGG 4 cut(s) 246, 325, 583, 716
BstSFI CTRYAG 1 cut(s) 235
BstUI CGCG 1 cut(s) 142
BstV1I GCAGC 4 cut(s) 65, 68, 99, 249
BstV2I GAAGAC 1 cut(s) 586
BsuRI GGCC 3 cut(s) 5, 176, 232
BtsCI GGATG 3 cut(s) 475, 701, 713
BtsIMutI CAGTG 1 cut(s) 366
Cac8I GCNNGC 2 cut(s) 292, 623
CfoI GCGC 2 cut(s) 279, 311
Cfr10I RCCGGY 1 cut(s) 172
Cfr13I GGNCC 1 cut(s) 231
CseI GACGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 214
CviAII CATG 2 cut(s) 403, 456
CviQI GTAC 1 cut(s) 214
DdeI CTNAG 3 cut(s) 241, 722, 771
DpnI GATC 1 cut(s) 749
DpnII GATC 1 cut(s) 747
DraI TTTAAA 1 cut(s) 10
Eam1104I CTCTTC 3 cut(s) 204, 227, 403
EarI CTCTTC 3 cut(s) 204, 227, 403
EciI GGCGGA 1 cut(s) 266
Eco24I GRGCYC 1 cut(s) 222
Eco88I CYCGRG 1 cut(s) 506
EcoRI GAATTC 1 cut(s) 638
EcoRII CCWGG 3 cut(s) 246, 583, 716
EcoT22I ATGCAT 1 cut(s) 475
EcoT38I GRGCYC 1 cut(s) 222
Esp3I CGTCTC 1 cut(s) 190
FaeI CATG 2 cut(s) 406, 459
FaqI GGGAC 1 cut(s) 170
FatI CATG 2 cut(s) 402, 455
FauI CCCGC 1 cut(s) 614
FblI GTMKAC 1 cut(s) 131
Fnu4HI GCNGC 6 cut(s) 79, 82, 85, 88, 238, 339
FokI GGATG 3 cut(s) 482, 688, 700
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 6 cut(s) 79, 82, 85, 88, 238, 339
FspBI CTAG 3 cut(s) 98, 291, 531
GlaI GCGC 2 cut(s) 278, 310
GluI GCNGC 6 cut(s) 79, 82, 85, 88, 238, 339
GsuI CTGGAG 1 cut(s) 567
HaeII RGCGCY 1 cut(s) 312
HaeIII GGCC 3 cut(s) 5, 176, 232
HapII CCGG 2 cut(s) 173, 327
HgaI GACGC 1 cut(s) 131
HhaI GCGC 2 cut(s) 279, 311
Hin1I GRCGYC 1 cut(s) 357
Hin1II CATG 2 cut(s) 406, 459
Hin6I GCGC 2 cut(s) 277, 309
HinP1I GCGC 2 cut(s) 277, 309
HincII GTYRAC 1 cut(s) 132
HindII GTYRAC 1 cut(s) 132
HindIII AAGCTT 1 cut(s) 674
HinfI GANTC 3 cut(s) 116, 161, 374
HpaII CCGG 2 cut(s) 173, 327
Hpy166II GTNNAC 1 cut(s) 132
Hpy188I TCNGA 2 cut(s) 166, 575
Hpy188III TCNNGA 5 cut(s) 196, 285, 643, 680, 755
Hpy8I GTNNAC 1 cut(s) 132
Hpy99I CGWCG 1 cut(s) 136
HpyAV CCTTC 4 cut(s) 101, 187, 199, 743
HpyCH4III ACNGT 3 cut(s) 136, 559, 781
HpyCH4IV ACGT 2 cut(s) 357, 479
HpyCH4V TGCA 4 cut(s) 237, 438, 473, 787
HpyF10VI GCNNNNNNNGC 3 cut(s) 84, 87, 470
HpyF3I CTNAG 3 cut(s) 241, 722, 771
HpySE526I ACGT 2 cut(s) 357, 479
Hsp92I GRCGYC 1 cut(s) 357
Hsp92II CATG 2 cut(s) 406, 459
HspAI GCGC 2 cut(s) 277, 309
Kzo9I GATC 1 cut(s) 747
LguI GCTCTTC 1 cut(s) 227
LmnI GCTCC 3 cut(s) 287, 461, 576
Lsp1109I GCAGC 4 cut(s) 65, 68, 99, 249
LweI GCATC 6 cut(s) 460, 482, 517, 634, 673, 722
MaeI CTAG 3 cut(s) 98, 291, 531
MaeII ACGT 2 cut(s) 357, 479
MaeIII GTNAC 2 cut(s) 358, 559
MalI GATC 1 cut(s) 749
MboI GATC 1 cut(s) 747
MboII GAAGA 5 cut(s) 179, 214, 221, 420, 586
MhlI GDGCHC 2 cut(s) 222, 417
MluCI AATT 5 cut(s) 13, 111, 497, 577, 638
MlyI GAGTC 2 cut(s) 110, 155
MmeI TCCRAC 1 cut(s) 71
MnlI CCTC 3 cut(s) 31, 382, 557
Mph1103I ATGCAT 1 cut(s) 475
MseI TTAA 2 cut(s) 9, 423
MspI CCGG 2 cut(s) 173, 327
MspR9I CCNGG 4 cut(s) 248, 327, 585, 718
MvaI CCWGG 3 cut(s) 248, 585, 718
MvnI CGCG 1 cut(s) 142
MwoI GCNNNNNNNGC 3 cut(s) 84, 87, 470
NciI CCSGG 1 cut(s) 327
NdeII GATC 1 cut(s) 747
NheI GCTAGC 1 cut(s) 290
NlaIII CATG 2 cut(s) 406, 459
NmuCI GTSAC 2 cut(s) 358, 559
NsiI ATGCAT 1 cut(s) 475
PciSI GCTCTTC 1 cut(s) 227
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PfeI GAWTC 1 cut(s) 374
PkrI GCNGC 6 cut(s) 80, 83, 86, 89, 239, 340
PleI GAGTC 2 cut(s) 110, 155
PpsI GAGTC 2 cut(s) 110, 155
Psp1406I AACGTT 1 cut(s) 479
Psp6I CCWGG 3 cut(s) 246, 583, 716
PspGI CCWGG 3 cut(s) 246, 583, 716
PspPI GGNCC 1 cut(s) 231
PstI CTGCAG 1 cut(s) 239
RsaI GTAC 1 cut(s) 215
RsaNI GTAC 1 cut(s) 214
SalI GTCGAC 1 cut(s) 130
SapI GCTCTTC 1 cut(s) 227
SaqAI TTAA 2 cut(s) 9, 423
SatI GCNGC 6 cut(s) 79, 82, 85, 88, 238, 339
Sau3AI GATC 1 cut(s) 747
Sau96I GGNCC 1 cut(s) 231
SchI GAGTC 2 cut(s) 110, 155
ScrFI CCNGG 4 cut(s) 248, 327, 585, 718
SduI GDGCHC 2 cut(s) 222, 417
SfaNI GCATC 6 cut(s) 460, 482, 517, 634, 673, 722
SfcI CTRYAG 1 cut(s) 235
SmlI CTYRAG 1 cut(s) 431
SmoI CTYRAG 1 cut(s) 431
Sse9I AATT 5 cut(s) 13, 111, 497, 577, 638
SsiI CCGC 4 cut(s) 84, 251, 339, 621
SspMI CTAG 3 cut(s) 98, 291, 531
StyD4I CCNGG 4 cut(s) 246, 325, 583, 716
TaaI ACNGT 3 cut(s) 136, 559, 781
TaiI ACGT 2 cut(s) 360, 482
TaqI TCGA 6 cut(s) 131, 195, 300, 377, 417, 616
TasI AATT 5 cut(s) 13, 111, 497, 577, 638
TauI GCSGC 2 cut(s) 87, 341
TfiI GAWTC 1 cut(s) 374
Tru1I TTAA 2 cut(s) 9, 423
Tru9I TTAA 2 cut(s) 9, 423
TscAI CASTG 1 cut(s) 373
TseFI GTSAC 2 cut(s) 358, 559
TseI GCWGC 4 cut(s) 78, 81, 87, 237
Tsp45I GTSAC 2 cut(s) 358, 559
TspDTI ATGAA 3 cut(s) 218, 586, 681
TspGWI ACGGA 1 cut(s) 172
TspRI CASTG 1 cut(s) 373
XapI RAATTY 3 cut(s) 497, 577, 638
XmiI GTMKAC 1 cut(s) 131
XspI CTAG 3 cut(s) 98, 291, 531
ZraI GACGTC 1 cut(s) 358
Zsp2I ATGCAT 1 cut(s) 475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.