Rh2CG126200

Methyltransferase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0007936
Physical Location & Seq
Reverse (-)
11264796 .. 11266194
1399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG126200.1

Sequence Viewer

Length: 453 bp
ATGTCTTTGGAACTTTTGACCGGAATTGGACTCTATAAACAGATTTCGCAGCGGCGGGAAGAAGAAGAGCAAAGGCGGTCGGATATGGAAGGCGGTGAATCGGAGATGACGACAGTATCACGTCATCATTTCGGAGATGACTCGGACCGACCGGACTTGTCTATATCCATAATCGAGAATATGAAAGAAGACTATGGGCTGTTCGTGTGGCCTTGCAGTATAGTCCTGGCGGAGTATGTGTGGCAGCAAAGACTGCGTTTTGCCGGAGCTAGTGTGGTTGAGCTTGGTGCTGGAACTTCTTTGCCTGGTTTGGTTGCCGCCAAAGTGGGCGCTGACGTCACTCTTACTGATGAATCCAATAGGTTGGAGGTGCTGAGCAACATGAAAAGTGTTATTGAACTTAACAAACTTCAATGCAATGTAAGCTATTATGCCATAACTCGACCGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

150

Amino Acids

16.76

Weight (kDa)

4.78

Isoelectric Point (pI)

52.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 52 - 143 6.3e-14 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 339
AciI CCGC 6 cut(s) 52, 55, 76, 93, 230, 318
AcyI GRCGYC 1 cut(s) 336
AgsI TTSAA 2 cut(s) 398, 413
AjiI CACGTC 1 cut(s) 122
AjnI CCWGG 2 cut(s) 225, 304
AluBI AGCT 3 cut(s) 269, 283, 426
AluI AGCT 3 cut(s) 269, 283, 426
AoxI GGCC 1 cut(s) 209
ApeKI GCWGC 2 cut(s) 49, 244
AspLEI GCGC 1 cut(s) 332
AspS9I GGNCC 1 cut(s) 145
AsuHPI GGTGA 1 cut(s) 107
AvaII GGWCC 1 cut(s) 145
BaeI ACNNNNGTAYC 2 cut(s) 99, 132
BbsI GAAGAC 1 cut(s) 195
BbvI GCAGC 2 cut(s) 61, 256
BciT130I CCWGG 2 cut(s) 227, 306
BfaI CTAG 1 cut(s) 270
BfoI RGCGCY 1 cut(s) 333
BisI GCNGC 4 cut(s) 50, 53, 245, 318
BlpI GCTNAGC 1 cut(s) 374
BlsI GCNGC 4 cut(s) 51, 54, 246, 319
Bme1390I CCNGG 2 cut(s) 227, 306
Bme18I GGWCC 1 cut(s) 145
BmgBI CACGTC 1 cut(s) 122
BmgT120I GGNCC 1 cut(s) 145
BmrFI CCNGG 2 cut(s) 227, 306
BpiI GAAGAC 1 cut(s) 195
Bpu1102I GCTNAGC 1 cut(s) 374
BsaHI GRCGYC 1 cut(s) 336
BsaWI WCCGGW 2 cut(s) 20, 151
BsaXI ACNNNNNCTCC 4 cut(s) 224, 254, 258, 288
Bse118I RCCGGY 1 cut(s) 445
Bse3DI GCAATG 1 cut(s) 424
BseBI CCWGG 2 cut(s) 227, 306
BseMI GCAATG 1 cut(s) 424
BseMII CTCAG 1 cut(s) 365
BseXI GCAGC 2 cut(s) 61, 256
Bsh1285I CGRYCG 3 cut(s) 80, 152, 446
BshFI GGCC 1 cut(s) 211
BsiEI CGRYCG 3 cut(s) 80, 152, 446
BsiSI CCGG 4 cut(s) 21, 152, 264, 446
BsnI GGCC 1 cut(s) 211
Bsp1720I GCTNAGC 1 cut(s) 374
BspACI CCGC 6 cut(s) 52, 55, 76, 93, 230, 318
BspANI GGCC 1 cut(s) 211
BspCNI CTCAG 1 cut(s) 366
BspQI GCTCTTC 1 cut(s) 60
BsrDI GCAATG 1 cut(s) 424
BsrFI RCCGGY 1 cut(s) 445
BssAI RCCGGY 1 cut(s) 445
BssNI GRCGYC 1 cut(s) 336
Bst2UI CCWGG 2 cut(s) 227, 306
Bst4CI ACNGT 1 cut(s) 115
Bst6I CTCTTC 1 cut(s) 60
BstACI GRCGYC 1 cut(s) 336
BstAPI GCANNNNNTGC 1 cut(s) 253
BstDEI CTNAG 2 cut(s) 374, 450
BstH2I RGCGCY 1 cut(s) 333
BstHHI GCGC 1 cut(s) 332
BstMCI CGRYCG 3 cut(s) 80, 152, 446
BstMWI GCNNNNNNNGC 2 cut(s) 253, 423
BstNI CCWGG 2 cut(s) 227, 306
BstSCI CCNGG 2 cut(s) 225, 304
BstV1I GCAGC 2 cut(s) 61, 256
BstV2I GAAGAC 1 cut(s) 195
BstXI CCANNNNNNTGG 1 cut(s) 364
BsuRI GGCC 1 cut(s) 211
BtrI CACGTC 1 cut(s) 122
CfoI GCGC 1 cut(s) 332
Cfr10I RCCGGY 1 cut(s) 445
Cfr13I GGNCC 1 cut(s) 145
CpoI CGGWCCG 1 cut(s) 145
CspI CGGWCCG 1 cut(s) 145
CviAII CATG 1 cut(s) 382
CviJI RGCY 6 cut(s) 199, 211, 269, 283, 426, 449
CviKI_1 RGCY 6 cut(s) 199, 211, 269, 283, 426, 449
DdeI CTNAG 2 cut(s) 374, 450
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
EciI GGCGGA 1 cut(s) 245
Eco47I GGWCC 1 cut(s) 145
EcoRII CCWGG 2 cut(s) 225, 304
FaeI CATG 1 cut(s) 385
FatI CATG 1 cut(s) 381
FauI CCCGC 1 cut(s) 48
Fnu4HI GCNGC 4 cut(s) 50, 53, 245, 318
Fsp4HI GCNGC 4 cut(s) 50, 53, 245, 318
FspBI CTAG 1 cut(s) 270
GlaI GCGC 1 cut(s) 331
GluI GCNGC 4 cut(s) 50, 53, 245, 318
HaeII RGCGCY 1 cut(s) 333
HaeIII GGCC 1 cut(s) 211
HapII CCGG 4 cut(s) 21, 152, 264, 446
HhaI GCGC 1 cut(s) 332
Hin1I GRCGYC 1 cut(s) 336
Hin1II CATG 1 cut(s) 385
Hin6I GCGC 1 cut(s) 330
HinP1I GCGC 1 cut(s) 330
HinfI GANTC 4 cut(s) 30, 98, 140, 353
HpaII CCGG 4 cut(s) 21, 152, 264, 446
HphI GGTGA 1 cut(s) 107
Hpy188I TCNGA 4 cut(s) 82, 103, 134, 145
Hpy188III TCNNGA 1 cut(s) 175
HpyAV CCTTC 1 cut(s) 83
HpyCH4III ACNGT 1 cut(s) 115
HpyCH4IV ACGT 2 cut(s) 121, 336
HpyCH4V TGCA 2 cut(s) 216, 417
HpyF10VI GCNNNNNNNGC 2 cut(s) 253, 423
HpyF3I CTNAG 2 cut(s) 374, 450
HpySE526I ACGT 2 cut(s) 121, 336
Hsp92I GRCGYC 1 cut(s) 336
Hsp92II CATG 1 cut(s) 385
HspAI GCGC 1 cut(s) 330
LguI GCTCTTC 1 cut(s) 60
LmnI GCTCC 1 cut(s) 266
LpnPI CCDG 8 cut(s) 34, 165, 212, 239, 276, 277, 291, 318
Lsp1109I GCAGC 2 cut(s) 61, 256
MaeI CTAG 1 cut(s) 270
MaeII ACGT 2 cut(s) 121, 336
MaeIII GTNAC 1 cut(s) 337
MboII GAAGA 4 cut(s) 71, 74, 77, 200
MluCI AATT 1 cut(s) 24
MlyI GAGTC 2 cut(s) 24, 134
MmeI TCCRAC 2 cut(s) 60, 345
MnlI CCTC 1 cut(s) 361
MseI TTAA 1 cut(s) 402
MspA1I CMGCKG 1 cut(s) 52
MspI CCGG 4 cut(s) 21, 152, 264, 446
MspR9I CCNGG 2 cut(s) 227, 306
MvaI CCWGG 2 cut(s) 227, 306
MwoI GCNNNNNNNGC 2 cut(s) 253, 423
NlaIII CATG 1 cut(s) 385
NmuCI GTSAC 1 cut(s) 337
PciSI GCTCTTC 1 cut(s) 60
PcsI WCGNNNNNNNCGW 1 cut(s) 107
PfeI GAWTC 2 cut(s) 98, 353
PkrI GCNGC 4 cut(s) 51, 54, 246, 319
PleI GAGTC 2 cut(s) 24, 134
PpsI GAGTC 2 cut(s) 24, 134
Psp6I CCWGG 2 cut(s) 225, 304
PspGI CCWGG 2 cut(s) 225, 304
PspPI GGNCC 1 cut(s) 145
Rsr2I CGGWCCG 1 cut(s) 145
RsrII CGGWCCG 1 cut(s) 145
SapI GCTCTTC 1 cut(s) 60
SaqAI TTAA 1 cut(s) 402
SatI GCNGC 4 cut(s) 50, 53, 245, 318
Sau96I GGNCC 1 cut(s) 145
SchI GAGTC 2 cut(s) 24, 134
ScrFI CCNGG 2 cut(s) 227, 306
SetI ASST 7 cut(s) 124, 271, 285, 339, 365, 372, 428
SinI GGWCC 1 cut(s) 145
Sse9I AATT 1 cut(s) 24
SsiI CCGC 6 cut(s) 52, 55, 76, 93, 230, 318
SspMI CTAG 1 cut(s) 270
StyD4I CCNGG 2 cut(s) 225, 304
TaaI ACNGT 1 cut(s) 115
TaiI ACGT 2 cut(s) 124, 339
TaqI TCGA 2 cut(s) 174, 442
TaqII GACCGA 1 cut(s) 162
TasI AATT 1 cut(s) 24
TauI GCSGC 2 cut(s) 55, 320
TfiI GAWTC 2 cut(s) 98, 353
Tru1I TTAA 1 cut(s) 402
Tru9I TTAA 1 cut(s) 402
TseFI GTSAC 1 cut(s) 337
TseI GCWGC 2 cut(s) 49, 244
Tsp45I GTSAC 1 cut(s) 337
TspDTI ATGAA 3 cut(s) 197, 366, 398
VpaK11BI GGWCC 1 cut(s) 145
XspI CTAG 1 cut(s) 270
ZraI GACGTC 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.