Prupe.7G173600_v2.0.a1

Methyltransferase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0007936
Physical Location & Seq
Forward (+)
17388532 .. 17391061
2530 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G173600.1

Sequence Viewer

Length: 711 bp
ATGGAACCCATTGACTCGGCCGAAACCGAAACGGCCGATACTCTTATGACGACGGTGTCTCGTCATCATTTCGGGGATGAAATGGACGAACCGGCCTTCTCCATCTCTATCATCGAGAACATGAAGGAAGACTATGGTCTGTTCGTGTGGCCCTGTAGCGTGGTCCTAGCGGAGTATGTTTGGCAACAGAGATTGCGCTTTTCCGGAGCCGGTGTGTTAGAGCTTGGTGCTGGAACTTCCTTGCCAGGTTTAGTTGCAGCCAAAGTTGGTGCCGACGTCACTCTCACTGATGACTCGAGTAGATTAGAGGTGCTGGACAACATGAAACGAGTGCTTGACCTTAATAAACTTGAGTGCAATGTAATGGGATTGACATGGGGAGTTTGGGATGCATCTACATTCAGTTTACATCCAAAATTTGTTCTTGGGGCTGATGTGTTATATGATGCTAGTGCCTTTGATGACCTCTTTGCCACTGTTACATTCCTGCTCCAAAGTTCTCCGGGGTCAGTGTTCATAACAACTTACCATAATCGGAGTGGACATCATCTGATTGAGTTTTTGATGGTCAAATGGGGGTTGAAGTGTGTGAAGCTTCTTGATGCCTTTTCATTTATGCCATCCCACAAGGCATCCGGGCTAAGCGGCAACCTTCAGTTGGCAGAGATTGTTCTGGATAGTCAACGGGCTGAGATACCGGTTTTGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

237

Amino Acids

26.02

Weight (kDa)

4.76

Isoelectric Point (pI)

40.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 55
AatII GACGTC 1 cut(s) 279
AccB1I GGYRCC 1 cut(s) 269
AccIII TCCGGA 1 cut(s) 203
AciI CCGC 2 cut(s) 170, 645
AcoI YGGCCR 2 cut(s) 18, 33
AcsI RAATTY 1 cut(s) 416
AcuI CTGAAG 1 cut(s) 638
AcyI GRCGYC 1 cut(s) 276
AfiI CCNNNNNNNGG 1 cut(s) 658
AgeI ACCGGT 1 cut(s) 697
AgsI TTSAA 1 cut(s) 583
AjnI CCWGG 1 cut(s) 244
AluBI AGCT 2 cut(s) 223, 595
AluI AGCT 2 cut(s) 223, 595
Alw26I GTCTC 1 cut(s) 63
Ama87I CYCGRG 1 cut(s) 295
Aor13HI TCCGGA 1 cut(s) 203
AoxI GGCC 4 cut(s) 18, 33, 93, 149
ApeKI GCWGC 1 cut(s) 257
ApoI RAATTY 1 cut(s) 416
AsiGI ACCGGT 1 cut(s) 697
AspLEI GCGC 1 cut(s) 198
AspS9I GGNCC 2 cut(s) 150, 163
AsuC2I CCSGG 2 cut(s) 504, 637
AvaI CYCGRG 1 cut(s) 295
AvaII GGWCC 1 cut(s) 163
BanI GGYRCC 1 cut(s) 269
BbsI GAAGAC 1 cut(s) 135
BbvI GCAGC 1 cut(s) 269
BccI CCATC 3 cut(s) 110, 559, 628
BceAI ACGGC 1 cut(s) 48
BciT130I CCWGG 1 cut(s) 246
BcnI CCSGG 2 cut(s) 504, 637
BcoDI GTCTC 1 cut(s) 63
BfaI CTAG 2 cut(s) 167, 450
BfmI CTRYAG 1 cut(s) 154
BisI GCNGC 2 cut(s) 258, 646
BlpI GCTNAGC 1 cut(s) 641
BlsI GCNGC 2 cut(s) 259, 647
Bme1390I CCNGG 3 cut(s) 246, 504, 637
Bme18I GGWCC 1 cut(s) 163
BmeT110I CYCGRG 1 cut(s) 295
BmgT120I GGNCC 2 cut(s) 150, 163
BmiI GGNNCC 3 cut(s) 6, 208, 271
BmrFI CCNGG 3 cut(s) 246, 504, 637
BmsI GCATC 5 cut(s) 379, 401, 436, 592, 641
BoxI GACNNNNGTC 1 cut(s) 135
BpiI GAAGAC 1 cut(s) 135
Bpu1102I GCTNAGC 1 cut(s) 641
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 2 cut(s) 504, 637
BsaHI GRCGYC 1 cut(s) 276
BsaJI CCNNGG 1 cut(s) 503
BsaWI WCCGGW 2 cut(s) 203, 697
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bsc4I CCNNNNNNNGG 1 cut(s) 658
Bse118I RCCGGY 3 cut(s) 91, 209, 697
Bse3DI GCAATG 1 cut(s) 364
BseAI TCCGGA 1 cut(s) 203
BseBI CCWGG 1 cut(s) 246
BseDI CCNNGG 1 cut(s) 503
BseGI GGATG 5 cut(s) 82, 394, 409, 620, 632
BseLI CCNNNNNNNGG 1 cut(s) 658
BseMI GCAATG 1 cut(s) 364
BseMII CTCAG 1 cut(s) 681
BseX3I CGGCCG 2 cut(s) 18, 33
BseXI GCAGC 1 cut(s) 269
Bsh1285I CGRYCG 2 cut(s) 21, 36
BshFI GGCC 4 cut(s) 20, 35, 95, 151
BshNI GGYRCC 1 cut(s) 269
BshTI ACCGGT 1 cut(s) 697
BsiEI CGRYCG 2 cut(s) 21, 36
BsiHKCI CYCGRG 1 cut(s) 295
BsiSI CCGG 6 cut(s) 92, 204, 210, 503, 636, 698
BslI CCNNNNNNNGG 1 cut(s) 658
BsmAI GTCTC 1 cut(s) 63
BsnI GGCC 4 cut(s) 20, 35, 95, 151
BsoBI CYCGRG 1 cut(s) 295
Bsp13I TCCGGA 1 cut(s) 203
Bsp1720I GCTNAGC 1 cut(s) 641
BspACI CCGC 2 cut(s) 170, 645
BspANI GGCC 4 cut(s) 20, 35, 95, 151
BspCNI CTCAG 1 cut(s) 682
BspEI TCCGGA 1 cut(s) 203
BspLI GGNNCC 3 cut(s) 6, 208, 271
BspT107I GGYRCC 1 cut(s) 269
BsrDI GCAATG 1 cut(s) 364
BsrFI RCCGGY 3 cut(s) 91, 209, 697
BssAI RCCGGY 3 cut(s) 91, 209, 697
BssECI CCNNGG 1 cut(s) 503
BssNI GRCGYC 1 cut(s) 276
Bst2UI CCWGG 1 cut(s) 246
Bst4CI ACNGT 2 cut(s) 55, 478
BstACI GRCGYC 1 cut(s) 276
BstDEI CTNAG 2 cut(s) 641, 690
BstF5I GGATG 5 cut(s) 82, 394, 409, 620, 632
BstHHI GCGC 1 cut(s) 198
BstMAI GTCTC 1 cut(s) 63
BstMCI CGRYCG 2 cut(s) 21, 36
BstNI CCWGG 1 cut(s) 246
BstPAI GACNNNNGTC 1 cut(s) 135
BstSCI CCNGG 3 cut(s) 244, 502, 635
BstSFI CTRYAG 1 cut(s) 154
BstV1I GCAGC 1 cut(s) 269
BstV2I GAAGAC 1 cut(s) 135
BstZI CGGCCG 2 cut(s) 18, 33
BsuRI GGCC 4 cut(s) 20, 35, 95, 151
BtsCI GGATG 5 cut(s) 82, 394, 409, 620, 632
BtsIMutI CAGTG 3 cut(s) 285, 474, 516
CfoI GCGC 1 cut(s) 198
Cfr10I RCCGGY 3 cut(s) 91, 209, 697
Cfr13I GGNCC 2 cut(s) 150, 163
CspAI ACCGGT 1 cut(s) 697
CviAII CATG 3 cut(s) 121, 322, 375
DdeI CTNAG 2 cut(s) 641, 690
DrdI GACNNNNNNGTC 1 cut(s) 55
DseDI GACNNNNNNGTC 1 cut(s) 55
EaeI YGGCCR 2 cut(s) 18, 33
EagI CGGCCG 2 cut(s) 18, 33
EclXI CGGCCG 2 cut(s) 18, 33
Eco47I GGWCC 1 cut(s) 163
Eco52I CGGCCG 2 cut(s) 18, 33
Eco57I CTGAAG 1 cut(s) 638
Eco88I CYCGRG 1 cut(s) 295
EcoRII CCWGG 1 cut(s) 244
EcoT22I ATGCAT 1 cut(s) 394
FaeI CATG 3 cut(s) 124, 325, 378
FatI CATG 3 cut(s) 120, 321, 374
Fnu4HI GCNGC 2 cut(s) 258, 646
FokI GGATG 5 cut(s) 89, 396, 401, 607, 619
Fsp4HI GCNGC 2 cut(s) 258, 646
FspBI CTAG 2 cut(s) 167, 450
GlaI GCGC 1 cut(s) 197
GluI GCNGC 2 cut(s) 258, 646
HaeIII GGCC 4 cut(s) 20, 35, 95, 151
HapII CCGG 6 cut(s) 92, 204, 210, 503, 636, 698
HhaI GCGC 1 cut(s) 198
Hin1I GRCGYC 1 cut(s) 276
Hin1II CATG 3 cut(s) 124, 325, 378
Hin6I GCGC 1 cut(s) 196
HinP1I GCGC 1 cut(s) 196
HincII GTYRAC 1 cut(s) 683
HindII GTYRAC 1 cut(s) 683
HindIII AAGCTT 1 cut(s) 593
HinfI GANTC 2 cut(s) 14, 293
HpaII CCGG 6 cut(s) 92, 204, 210, 503, 636, 698
Hpy166II GTNNAC 3 cut(s) 407, 542, 683
Hpy188I TCNGA 2 cut(s) 537, 552
Hpy188III TCNNGA 4 cut(s) 115, 204, 599, 674
Hpy8I GTNNAC 3 cut(s) 407, 542, 683
Hpy99I CGWCG 2 cut(s) 55, 278
HpyAV CCTTC 3 cut(s) 106, 118, 662
HpyCH4III ACNGT 2 cut(s) 55, 478
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 4 cut(s) 257, 357, 392, 706
HpyF3I CTNAG 2 cut(s) 641, 690
HpySE526I ACGT 1 cut(s) 276
Hsp92I GRCGYC 1 cut(s) 276
Hsp92II CATG 3 cut(s) 124, 325, 378
HspAI GCGC 1 cut(s) 196
Kpn2I TCCGGA 1 cut(s) 203
LmnI GCTCC 2 cut(s) 206, 495
Lsp1109I GCAGC 1 cut(s) 269
LweI GCATC 5 cut(s) 379, 401, 436, 592, 641
MaeI CTAG 2 cut(s) 167, 450
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 2 cut(s) 277, 478
MboII GAAGA 1 cut(s) 140
MluCI AATT 1 cut(s) 416
MlyI GAGTC 2 cut(s) 8, 287
MnlI CCTC 2 cut(s) 301, 476
Mph1103I ATGCAT 1 cut(s) 394
MroI TCCGGA 1 cut(s) 203
MseI TTAA 1 cut(s) 342
MspI CCGG 6 cut(s) 92, 204, 210, 503, 636, 698
MspR9I CCNGG 3 cut(s) 246, 504, 637
MvaI CCWGG 1 cut(s) 246
NciI CCSGG 2 cut(s) 504, 637
NlaIII CATG 3 cut(s) 124, 325, 378
NlaIV GGNNCC 3 cut(s) 6, 208, 271
NmuCI GTSAC 1 cut(s) 277
NsiI ATGCAT 1 cut(s) 394
PaeR7I CTCGAG 1 cut(s) 295
PflFI GACNNNGTC 1 cut(s) 55
PinAI ACCGGT 1 cut(s) 697
PkrI GCNGC 2 cut(s) 259, 647
PleI GAGTC 2 cut(s) 8, 287
PpsI GAGTC 2 cut(s) 8, 287
PshAI GACNNNNGTC 1 cut(s) 135
Psp6I CCWGG 1 cut(s) 244
PspGI CCWGG 1 cut(s) 244
PspN4I GGNNCC 3 cut(s) 6, 208, 271
PspPI GGNCC 2 cut(s) 150, 163
PspXI VCTCGAGB 1 cut(s) 295
PsyI GACNNNGTC 1 cut(s) 55
SaqAI TTAA 1 cut(s) 342
SatI GCNGC 2 cut(s) 258, 646
Sau96I GGNCC 2 cut(s) 150, 163
SchI GAGTC 2 cut(s) 8, 287
ScrFI CCNGG 3 cut(s) 246, 504, 637
SetI ASST 8 cut(s) 225, 250, 279, 312, 342, 468, 597, 654
SfaNI GCATC 5 cut(s) 379, 401, 436, 592, 641
SfcI CTRYAG 1 cut(s) 154
Sfr274I CTCGAG 1 cut(s) 295
SinI GGWCC 1 cut(s) 163
SlaI CTCGAG 1 cut(s) 295
SmlI CTYRAG 2 cut(s) 295, 350
SmoI CTYRAG 2 cut(s) 295, 350
Sse9I AATT 1 cut(s) 416
SsiI CCGC 2 cut(s) 170, 645
SspMI CTAG 2 cut(s) 167, 450
StyD4I CCNGG 3 cut(s) 244, 502, 635
TaaI ACNGT 2 cut(s) 55, 478
TaiI ACGT 1 cut(s) 279
TaqI TCGA 2 cut(s) 114, 296
TasI AATT 1 cut(s) 416
TauI GCSGC 1 cut(s) 648
Tru1I TTAA 1 cut(s) 342
Tru9I TTAA 1 cut(s) 342
TscAI CASTG 3 cut(s) 292, 481, 516
TseFI GTSAC 1 cut(s) 277
TseI GCWGC 1 cut(s) 257
Tsp45I GTSAC 1 cut(s) 277
TspDTI ATGAA 5 cut(s) 93, 137, 338, 505, 600
TspRI CASTG 3 cut(s) 292, 481, 516
Tth111I GACNNNGTC 1 cut(s) 55
VpaK11BI GGWCC 1 cut(s) 163
XapI RAATTY 1 cut(s) 416
XcmI CCANNNNNNNNNTGG 1 cut(s) 536
XhoI CTCGAG 1 cut(s) 295
XspI CTAG 2 cut(s) 167, 450
ZraI GACGTC 1 cut(s) 277
Zsp2I ATGCAT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.