Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010656

Physical Location & Seq

Genomic Coordinates Reverse (-)

23758241 .. 23760663

Gene Structure 2423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G64040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGGAAGATAGTGTGGTGGATGATGTTATAAAGAGGTTACTAGGAGCGAAAAACGGGAAGACGACGAAGCAGGTTCAGTTGACGGAGGCTGAGATTAAACATCTTTGTTCTACCGCTAAGCAGATCTTTCTCACTCAACCTAATCTTCTTGAACTCGAGGCTCCTATTAAGATTTGTGGAGATACTCATGGTCAGTTCTCAGATCTTTTGAGATTGTTCGAGTATGGTGGCTACCCACCAGCTGCAAACTATTTGTTTCTTGGGGATTATGTAGATCGTGGAAAGCAGAGTGTAGAGACCATATGCCTTCTTCTTGCCTACAAGATCAAATACAAAGAGAATTTCTTTCTTCTACGTGGGAACCATGAGTGTGCTTCTATAAACCGTATATACGGATTCTATGACGAGTGCAAGAAGAGATATAGCGTTCGAGTGTGGAAGATATTTACTGACTGCTTTAATTGTCTACCTGTTGCTGCTCTTATTGATGAAAAGATCCTCTGTATGCATGGTGGGCTATCGCCTGAGTTGAAGCACTTGGATGAGATCAGGAACATTCCTCGTCCTGCTGACATTCCTGATCATGGACTACTGTGTGATCTGTTGTGGTCTGATCCTGACAAAGACATTGAAGGATGGGGAGAGAATGACAGGGGTGTCTCGTACACTTTTGGGGCTGATAAAGTCGAGGAGTTTCTTCAAACGCATGACCTTGACTTAATTTGTAGAGCTCATCAGGTTGTGGAAGACGGGTATGAATTCTTTGCAAATAGACAGCTAGTAACGATATTCTCGGCCCCAAACTACTGCGGAGAGTTTGATAACGCAGGAGCAATGATGAGTGTGGATGATTCCTTGACGTGCTCATTTCAGATCCTTAAAGCATCTGAGAAGAAAGGAAACTTCGGGTTTGGCAAAAATGCAGGAAGGCGAGGAACCCCGCCTCGCAAGGGTGGTGGAAAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000164 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:0140096 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04022 ko04024 ko04113 ko04114 ko04218 ko04261 ko04270 ko04390 ko04510 ko04611 ko04720 ko04728 ko04750 ko04810 ko04910 ko04921 ko04931 ko05031 ko05034 ko05168 ko05205 map03015 map04022 map04024 map04113 map04114 map04218 map04261 map04270 map04390 map04510 map04611 map04720 map04728 map04750 map04810 map04910 map04921 map04931 map05031 map05034 map05168 map05205

Pfam Domains

Protein Families

Metallophos STPPase_N

Protein Analysis

322

Amino Acids

36.21

Weight (kDa)

5.68

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STPPase_N	PF16891	6 - 53	1.1e-19	Serine-threonine protein phosphatase N-terminal domain
Metallophos	PF00149	55 - 248	4.9e-51	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010656)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64040 AT4G11240
fragaria_vesca	FvH4_5g03260
malus_domestica	MD14G1112500.v1.1 MD14G1112800.v1.1 MD14G1112900.v1.1
prunus_persica	Prupe.5G107100_v2.0.a1
pyrus_communis	pycom14g10790
rosa_chinensis	RchiOBHm_Chr7g0196511
rosa_laevigata	RLG00000004008
rosa_multiflora	Rmu_sc0013350.1_g000011 Rmu_sc0019310.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259240
rosa_rugosa	Rorug07G0034200 Rorug07G0034300
rosa_samantha	Rh7AG158400 Rh7BG160400 Rh7CG166800 Rh7DG159600
rosa_wichuraiana	Rw7G013840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	29
AasI	GACNNNNNNGTC	1 cut(s)	656
Acc36I	ACCTGC	1 cut(s)	61
AccI	GTMKAC	1 cut(s)	466
AciI	CCGC	3 cut(s)	114, 810, 941
AclWI	GGATC	3 cut(s)	490, 608, 868
AcsI	RAATTY	2 cut(s)	340, 758
AfaI	GTAC	1 cut(s)	665
AfiI	CCNNNNNNNGG	2 cut(s)	584, 950
AgsI	TTSAA	4 cut(s)	152, 532, 632, 701
AjiI	CACGTC	1 cut(s)	861
AluBI	AGCT	3 cut(s)	242, 731, 778
AluI	AGCT	3 cut(s)	242, 731, 778
Alw21I	GWGCWC	2 cut(s)	733, 866
Alw26I	GTCTC	2 cut(s)	290, 664
AlwI	GGATC	3 cut(s)	490, 608, 868
Ama87I	CYCGRG	1 cut(s)	155
AoxI	GGCC	1 cut(s)	795
ApeKI	GCWGC	2 cut(s)	242, 476
ApoI	RAATTY	2 cut(s)	340, 758
AspS9I	GGNCC	1 cut(s)	796
AvaI	CYCGRG	1 cut(s)	155
BanII	GRGCYC	1 cut(s)	733
BbsI	GAAGAC	2 cut(s)	65, 753
Bbv12I	GWGCWC	2 cut(s)	733, 866
BbvI	GCAGC	2 cut(s)	229, 463
BccI	CCATC	1 cut(s)	630
BclI	TGATCA	1 cut(s)	580
BcoDI	GTCTC	2 cut(s)	290, 664
BfaI	CTAG	2 cut(s)	41, 779
BfuAI	ACCTGC	1 cut(s)	61
BglII	AGATCT	2 cut(s)	123, 202
BisI	GCNGC	2 cut(s)	243, 477
BlpI	GCTNAGC	1 cut(s)	117
BlsI	GCNGC	2 cut(s)	244, 478
BmeT110I	CYCGRG	1 cut(s)	155
BmgBI	CACGTC	1 cut(s)	861
BmgT120I	GGNCC	1 cut(s)	796
BmiI	GGNNCC	4 cut(s)	162, 362, 798, 937
BmsI	GCATC	1 cut(s)	893
BpiI	GAAGAC	2 cut(s)	65, 753
Bpu1102I	GCTNAGC	1 cut(s)	117
BsaAI	YACGTR	1 cut(s)	356
BsaI	GGTCTC	1 cut(s)	290
Bsc4I	CCNNNNNNNGG	2 cut(s)	584, 950
Bse3DI	GCAATG	1 cut(s)	840
BseGI	GGATG	4 cut(s)	25, 547, 641, 853
BseLI	CCNNNNNNNGG	2 cut(s)	584, 950
BseMI	GCAATG	1 cut(s)	840
BseMII	CTCAG	4 cut(s)	81, 213, 516, 879
BseRI	GAGGAG	1 cut(s)	704
BseXI	GCAGC	2 cut(s)	229, 463
BshFI	GGCC	1 cut(s)	797
BsiHKAI	GWGCWC	2 cut(s)	733, 866
BsiHKCI	CYCGRG	1 cut(s)	155
BslI	CCNNNNNNNGG	2 cut(s)	584, 950
BsmAI	GTCTC	2 cut(s)	290, 664
BsnI	GGCC	1 cut(s)	797
Bso31I	GGTCTC	1 cut(s)	290
BsoBI	CYCGRG	1 cut(s)	155
Bsp1286I	GDGCHC	2 cut(s)	733, 866
Bsp1720I	GCTNAGC	1 cut(s)	117
BspACI	CCGC	3 cut(s)	114, 810, 941
BspANI	GGCC	1 cut(s)	797
BspCNI	CTCAG	4 cut(s)	82, 212, 517, 880
BspLI	GGNNCC	4 cut(s)	162, 362, 798, 937
BspMI	ACCTGC	1 cut(s)	61
BspPI	GGATC	3 cut(s)	490, 608, 868
BspTNI	GGTCTC	1 cut(s)	290
BsrDI	GCAATG	1 cut(s)	840
Bst4CI	ACNGT	2 cut(s)	386, 594
Bst6I	CTCTTC	1 cut(s)	410
BstBAI	YACGTR	1 cut(s)	356
BstDEI	CTNAG	5 cut(s)	90, 117, 199, 525, 888
BstF5I	GGATG	4 cut(s)	25, 547, 641, 853
BstMAI	GTCTC	2 cut(s)	290, 664
BstMWI	GCNNNNNNNGC	1 cut(s)	514
BstV1I	GCAGC	2 cut(s)	229, 463
BstV2I	GAAGAC	2 cut(s)	65, 753
BstX2I	RGATCY	4 cut(s)	123, 202, 495, 873
BstYI	RGATCY	4 cut(s)	123, 202, 495, 873
BsuRI	GGCC	1 cut(s)	797
BtrI	CACGTC	1 cut(s)	861
BtsCI	GGATG	4 cut(s)	25, 547, 641, 853
BveI	ACCTGC	1 cut(s)	61
Cfr13I	GGNCC	1 cut(s)	796
Csp6I	GTAC	1 cut(s)	664
CspCI	CAANNNNNGTGG	1 cut(s)	937
CviAII	CATG	5 cut(s)	188, 365, 509, 584, 707
CviQI	GTAC	1 cut(s)	664
DdeI	CTNAG	5 cut(s)	90, 117, 199, 525, 888
DrdI	GACNNNNNNGTC	1 cut(s)	656
DseDI	GACNNNNNNGTC	1 cut(s)	656
Eam1104I	CTCTTC	1 cut(s)	410
EarI	CTCTTC	1 cut(s)	410
Ecl136II	GAGCTC	1 cut(s)	731
Eco24I	GRGCYC	1 cut(s)	733
Eco31I	GGTCTC	1 cut(s)	290
Eco53kI	GAGCTC	1 cut(s)	731
Eco88I	CYCGRG	1 cut(s)	155
EcoICRI	GAGCTC	1 cut(s)	731
EcoRI	GAATTC	1 cut(s)	758
EcoT22I	ATGCAT	1 cut(s)	510
EcoT38I	GRGCYC	1 cut(s)	733
FaeI	CATG	5 cut(s)	191, 368, 512, 587, 710
FalI	AAGNNNNNCTT	2 cut(s)	110, 142
FatI	CATG	5 cut(s)	187, 364, 508, 583, 706
FauI	CCCGC	1 cut(s)	948
FauNDI	CATATG	1 cut(s)	302
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	466
Fnu4HI	GCNGC	2 cut(s)	243, 477
FokI	GGATG	4 cut(s)	32, 554, 648, 860
FriOI	GRGCYC	1 cut(s)	733
Fsp4HI	GCNGC	2 cut(s)	243, 477
FspBI	CTAG	2 cut(s)	41, 779
GluI	GCNGC	2 cut(s)	243, 477
HaeIII	GGCC	1 cut(s)	797
Hin1II	CATG	5 cut(s)	191, 368, 512, 587, 710
HincII	GTYRAC	1 cut(s)	81
HindII	GTYRAC	1 cut(s)	81
HinfI	GANTC	2 cut(s)	396, 851
Hpy166II	GTNNAC	3 cut(s)	81, 467, 666
Hpy188I	TCNGA	4 cut(s)	202, 613, 873, 889
Hpy188III	TCNNGA	4 cut(s)	149, 550, 578, 617
Hpy8I	GTNNAC	3 cut(s)	81, 467, 666
Hpy99I	CGWCG	1 cut(s)	67
HpyAV	CCTTC	3 cut(s)	317, 626, 921
HpyCH4III	ACNGT	2 cut(s)	386, 594
HpyCH4IV	ACGT	2 cut(s)	355, 860
HpyCH4V	TGCA	5 cut(s)	245, 411, 508, 767, 923
HpyF10VI	GCNNNNNNNGC	1 cut(s)	514
HpyF3I	CTNAG	5 cut(s)	90, 117, 199, 525, 888
HpySE526I	ACGT	2 cut(s)	355, 860
Hsp92II	CATG	5 cut(s)	191, 368, 512, 587, 710
Ksp22I	TGATCA	1 cut(s)	580
LmnI	GCTCC	3 cut(s)	44, 166, 830
Lsp1109I	GCAGC	2 cut(s)	229, 463
LweI	GCATC	1 cut(s)	893
MaeI	CTAG	2 cut(s)	41, 779
MaeII	ACGT	2 cut(s)	355, 860
MaeIII	GTNAC	2 cut(s)	36, 781
MflI	RGATCY	4 cut(s)	123, 202, 495, 873
MhlI	GDGCHC	2 cut(s)	733, 866
MluCI	AATT	4 cut(s)	340, 460, 720, 758
MnlI	CCTC	8 cut(s)	27, 79, 151, 509, 570, 682, 926, 954
Mph1103I	ATGCAT	1 cut(s)	510
MseI	TTAA	5 cut(s)	96, 168, 459, 719, 879
MslI	CAYNNNNRTG	2 cut(s)	369, 540
MspA1I	CMGCKG	1 cut(s)	242
MwoI	GCNNNNNNNGC	1 cut(s)	514
NdeI	CATATG	1 cut(s)	302
NlaIII	CATG	5 cut(s)	191, 368, 512, 587, 710
NlaIV	GGNNCC	4 cut(s)	162, 362, 798, 937
NmeAIII	GCCGAG	1 cut(s)	773
NsiI	ATGCAT	1 cut(s)	510
PaeR7I	CTCGAG	1 cut(s)	155
PfeI	GAWTC	2 cut(s)	396, 851
PkrI	GCNGC	2 cut(s)	244, 478
Ppu21I	YACGTR	1 cut(s)	356
PsiI	TTATAA	1 cut(s)	29
Psp124BI	GAGCTC	1 cut(s)	733
PspN4I	GGNNCC	4 cut(s)	162, 362, 798, 937
PspPI	GGNCC	1 cut(s)	796
PspXI	VCTCGAGB	1 cut(s)	155
PsuI	RGATCY	4 cut(s)	123, 202, 495, 873
PvuII	CAGCTG	1 cut(s)	242
RsaI	GTAC	1 cut(s)	665
RsaNI	GTAC	1 cut(s)	664
RseI	CAYNNNNRTG	2 cut(s)	369, 540
SacI	GAGCTC	1 cut(s)	733
SaqAI	TTAA	5 cut(s)	96, 168, 459, 719, 879
SatI	GCNGC	2 cut(s)	243, 477
Sau96I	GGNCC	1 cut(s)	796
SduI	GDGCHC	2 cut(s)	733, 866
SfaNI	GCATC	1 cut(s)	893
Sfr274I	CTCGAG	1 cut(s)	155
SlaI	CTCGAG	1 cut(s)	155
SmiMI	CAYNNNNRTG	2 cut(s)	369, 540
SmlI	CTYRAG	1 cut(s)	155
SmoI	CTYRAG	1 cut(s)	155
Sse9I	AATT	4 cut(s)	340, 460, 720, 758
SsiI	CCGC	3 cut(s)	114, 810, 941
SspMI	CTAG	2 cut(s)	41, 779
SstI	GAGCTC	1 cut(s)	733
TaaI	ACNGT	2 cut(s)	386, 594
TaiI	ACGT	2 cut(s)	358, 863
TaqI	TCGA	4 cut(s)	156, 219, 430, 687
TasI	AATT	4 cut(s)	340, 460, 720, 758
TfiI	GAWTC	2 cut(s)	396, 851
Tru1I	TTAA	5 cut(s)	96, 168, 459, 719, 879
Tru9I	TTAA	5 cut(s)	96, 168, 459, 719, 879
TseI	GCWGC	2 cut(s)	242, 476
TspDTI	ATGAA	2 cut(s)	504, 771
TspGWI	ACGGA	2 cut(s)	98, 408
XapI	RAATTY	2 cut(s)	340, 758
XhoI	CTCGAG	1 cut(s)	155
XmiI	GTMKAC	1 cut(s)	466
XspI	CTAG	2 cut(s)	41, 779
Zsp2I	ATGCAT	1 cut(s)	510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.