Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0010656

Physical Location & Seq

Genomic Coordinates Reverse (-)

18201367 .. 18205580

Gene Structure 4214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1112800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 906 bp

ATGGACGAGAGTATTGTCGACCATCTTATACGGAAGCTTGTGGCAGCGAAGAAAGGCTGGACCACCAAACAGGTGCAACTCACGGAGGCTGAAATACGGCAGCTTTTTTCCACCTCCAAGGAAATCTTTCTCAGTCAGCCGAATCTTCTGGAGCTTGAAGCTCTGATAAAGATCTGTGGAGATGTTCACGGTCAGTATCCAGATATTTTGCGACTGTTTGAGTATGGTGGGTACCCACCTGAGGCCAACTATTTATTCCTAGGAGACTATATCAAATACAAGGAGAAATTCTTTCTCCTCAGAGGCAACCATGAATCTGCTTCCATCAATTGCATCTATGGATTCTATGATGAGTGCAAGAGAAGATTTAATGTTCATATTTGGAAGACATTTATTGACTGCTTCAACTGTCTTCCTGTTGCTGATCTTTTTGATGAGAAGATCCTTTGCATGCATGGCGGTCTATCTCCTGATTTGAAACACTTATATCAGATTAGGAATATTGCACGGCCGGTGGACGTGCCAGATCAGGGCCTTCTCTGTGATCTATTATGGGCTGATCATGATAAAGATGTTGAAGGTTGGGGAGAGAATGATCGTGGCATGTCATATACATTTGGGGCTGACAAGGTTGCTGAATTTCTCCAGAAACATGACCTAGATCTTATTTGCCACGCTCATCAGGTTGTGGAAGATGGATATGAGTTTTTTGGAAACAGGAAGCTGGTAACCATATTTTCAGCTCCAAATTACTGTGGGGAATTTGATAATGCTGGTGCCATGATGAGTGTAGATGATACATTGACATGTTCCTTCCAGATTTTGAAAGCCTCTGAGAAGAAGGGGAAGCTTGGGATAAACAACATGTTAAGACCAGGAACTCCTCCTCACAAGGGTAAGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03015 ko04022 ko04024 ko04113 ko04114 ko04218 ko04261 ko04270 ko04390 ko04510 ko04611 ko04720 ko04728 ko04750 ko04810 ko04910 ko04921 ko04931 ko05031 ko05034 ko05168 ko05205 map03015 map04022 map04024 map04113 map04114 map04218 map04261 map04270 map04390 map04510 map04611 map04720 map04728 map04750 map04810 map04910 map04921 map04931 map05031 map05034 map05168 map05205

Pfam Domains

Protein Families

Metallophos STPPase_N

Protein Analysis

302

Amino Acids

34.34

Weight (kDa)

5.67

Isoelectric Point (pI)

36.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STPPase_N	PF16891	6 - 53	1.1e-16	Serine-threonine protein phosphatase N-terminal domain
Metallophos	PF00149	56 - 230	1.4e-36	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010656)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64040 AT4G11240
fragaria_vesca	FvH4_5g03260
malus_domestica	MD14G1112500.v1.1 MD14G1112800.v1.1 MD14G1112900.v1.1
prunus_persica	Prupe.5G107100_v2.0.a1
pyrus_communis	pycom14g10790
rosa_chinensis	RchiOBHm_Chr7g0196511
rosa_laevigata	RLG00000004008
rosa_multiflora	Rmu_sc0013350.1_g000011 Rmu_sc0019310.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259240
rosa_rugosa	Rorug07G0034200 Rorug07G0034300
rosa_samantha	Rh7AG158400 Rh7BG160400 Rh7CG166800 Rh7DG159600
rosa_wichuraiana	Rw7G013840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	231
AccB1I	GGYRCC	2 cut(s)	231, 776
AccI	GTMKAC	1 cut(s)	18
AciI	CCGC	1 cut(s)	459
AclWI	GGATC	1 cut(s)	436
AcoI	YGGCCR	1 cut(s)	509
AcsI	RAATTY	3 cut(s)	287, 638, 761
AfaI	GTAC	1 cut(s)	233
AfiI	CCNNNNNNNGG	3 cut(s)	241, 530, 893
AflIII	ACRYGT	2 cut(s)	806, 864
AgsI	TTSAA	5 cut(s)	158, 406, 478, 578, 826
AjiI	CACGTC	1 cut(s)	520
AjnI	CCWGG	1 cut(s)	874
AjuI	GAANNNNNNNTTGG	2 cut(s)	239, 271
AluBI	AGCT	7 cut(s)	37, 103, 154, 161, 724, 743, 850
AluI	AGCT	7 cut(s)	37, 103, 154, 161, 724, 743, 850
Alw26I	GTCTC	1 cut(s)	258
AlwI	GGATC	1 cut(s)	436
AoxI	GGCC	3 cut(s)	243, 509, 532
ApeKI	GCWGC	2 cut(s)	44, 100
ApoI	RAATTY	3 cut(s)	287, 638, 761
Asp700I	GAANNNNTTC	1 cut(s)	126
Asp718I	GGTACC	1 cut(s)	231
AspA2I	CCTAGG	1 cut(s)	259
AspS9I	GGNCC	2 cut(s)	60, 532
AvaII	GGWCC	1 cut(s)	60
AvrII	CCTAGG	1 cut(s)	259
AxyI	CCTNAGG	1 cut(s)	240
BanI	GGYRCC	2 cut(s)	231, 776
BbsI	GAAGAC	2 cut(s)	392, 404
BbvI	GCAGC	2 cut(s)	56, 112
BccI	CCATC	3 cut(s)	30, 332, 689
BceAI	ACGGC	2 cut(s)	113, 524
BciT130I	CCWGG	1 cut(s)	876
BciVI	GTATCC	1 cut(s)	207
BclI	TGATCA	1 cut(s)	559
BcoDI	GTCTC	1 cut(s)	258
BfaI	CTAG	2 cut(s)	260, 659
BfuI	GTATCC	1 cut(s)	207
BglII	AGATCT	2 cut(s)	171, 661
BisI	GCNGC	2 cut(s)	45, 101
BlnI	CCTAGG	1 cut(s)	259
BlsI	GCNGC	2 cut(s)	46, 102
Bme1390I	CCNGG	1 cut(s)	876
Bme18I	GGWCC	1 cut(s)	60
BmgBI	CACGTC	1 cut(s)	520
BmgT120I	GGNCC	2 cut(s)	60, 532
BmiI	GGNNCC	2 cut(s)	233, 778
BmrFI	CCNGG	1 cut(s)	876
BmsI	GCATC	1 cut(s)	342
BpiI	GAAGAC	2 cut(s)	392, 404
BpmI	CTGGAG	2 cut(s)	170, 629
BsaBI	GATNNNNATC	1 cut(s)	170
BsaJI	CCNNGG	2 cut(s)	117, 259
Bsc4I	CCNNNNNNNGG	3 cut(s)	241, 530, 893
Bse118I	RCCGGY	1 cut(s)	511
Bse21I	CCTNAGG	1 cut(s)	240
Bse8I	GATNNNNATC	1 cut(s)	170
BseBI	CCWGG	1 cut(s)	876
BseDI	CCNNGG	2 cut(s)	117, 259
BseJI	GATNNNNATC	1 cut(s)	170
BseLI	CCNNNNNNNGG	3 cut(s)	241, 530, 893
BseMII	CTCAG	4 cut(s)	145, 231, 313, 825
BseRI	GAGGAG	3 cut(s)	287, 873, 876
BseX3I	CGGCCG	1 cut(s)	509
BseXI	GCAGC	2 cut(s)	56, 112
Bsh1285I	CGRYCG	1 cut(s)	512
BshFI	GGCC	3 cut(s)	245, 511, 534
BshNI	GGYRCC	2 cut(s)	231, 776
BsiEI	CGRYCG	1 cut(s)	512
BsiSI	CCGG	1 cut(s)	512
BslI	CCNNNNNNNGG	3 cut(s)	241, 530, 893
BsmAI	GTCTC	1 cut(s)	258
BsnI	GGCC	3 cut(s)	245, 511, 534
Bsp143I	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
BspACI	CCGC	1 cut(s)	459
BspANI	GGCC	3 cut(s)	245, 511, 534
BspCNI	CTCAG	4 cut(s)	144, 232, 312, 826
BspHI	TCATGA	1 cut(s)	562
BspLI	GGNNCC	2 cut(s)	233, 778
BspPI	GGATC	1 cut(s)	436
BspT107I	GGYRCC	2 cut(s)	231, 776
BsrFI	RCCGGY	1 cut(s)	511
BssAI	RCCGGY	1 cut(s)	511
BssECI	CCNNGG	2 cut(s)	117, 259
BssMI	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
BssT1I	CCWWGG	2 cut(s)	117, 259
Bst2UI	CCWGG	1 cut(s)	876
Bst4CI	ACNGT	4 cut(s)	191, 216, 410, 755
BstC8I	GCNNGC	1 cut(s)	452
BstDEI	CTNAG	4 cut(s)	131, 240, 299, 834
BstEII	GGTNACC	1 cut(s)	727
BstKTI	GATC	8 cut(s)	174, 427, 444, 529, 547, 562, 598, 664
BstMAI	GTCTC	1 cut(s)	258
BstMBI	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
BstMCI	CGRYCG	1 cut(s)	512
BstMWI	GCNNNNNNNGC	1 cut(s)	456
BstNI	CCWGG	1 cut(s)	876
BstNSI	RCATGY	4 cut(s)	454, 607, 810, 868
BstPI	GGTNACC	1 cut(s)	727
BstSCI	CCNGG	1 cut(s)	874
BstV1I	GCAGC	2 cut(s)	56, 112
BstV2I	GAAGAC	2 cut(s)	392, 404
BstX2I	RGATCY	3 cut(s)	171, 441, 661
BstYI	RGATCY	3 cut(s)	171, 441, 661
BstZI	CGGCCG	1 cut(s)	509
Bsu36I	CCTNAGG	1 cut(s)	240
BsuI	GTATCC	1 cut(s)	207
BsuRI	GGCC	3 cut(s)	245, 511, 534
BtrI	CACGTC	1 cut(s)	520
Cac8I	GCNNGC	1 cut(s)	452
CciI	TCATGA	1 cut(s)	562
Cfr10I	RCCGGY	1 cut(s)	511
Cfr13I	GGNCC	2 cut(s)	60, 532
Csp6I	GTAC	1 cut(s)	232
CviAII	CATG	9 cut(s)	311, 451, 455, 563, 604, 653, 781, 807, 865
CviQI	GTAC	1 cut(s)	232
DdeI	CTNAG	4 cut(s)	131, 240, 299, 834
DpnI	GATC	8 cut(s)	173, 426, 443, 528, 546, 561, 597, 663
DpnII	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
EaeI	YGGCCR	1 cut(s)	509
EagI	CGGCCG	1 cut(s)	509
EclXI	CGGCCG	1 cut(s)	509
Eco130I	CCWWGG	2 cut(s)	117, 259
Eco47I	GGWCC	1 cut(s)	60
Eco52I	CGGCCG	1 cut(s)	509
Eco81I	CCTNAGG	1 cut(s)	240
Eco91I	GGTNACC	1 cut(s)	727
EcoO109I	RGGNCCY	1 cut(s)	532
EcoO65I	GGTNACC	1 cut(s)	727
EcoRII	CCWGG	1 cut(s)	874
EcoT14I	CCWWGG	2 cut(s)	117, 259
EcoT22I	ATGCAT	1 cut(s)	456
ErhI	CCWWGG	2 cut(s)	117, 259
FaeI	CATG	9 cut(s)	314, 454, 458, 566, 607, 656, 784, 810, 868
FalI	AAGNNNNNCTT	2 cut(s)	110, 142
FatI	CATG	9 cut(s)	310, 450, 454, 562, 603, 652, 780, 806, 864
FbaI	TGATCA	1 cut(s)	559
FblI	GTMKAC	1 cut(s)	18
Fnu4HI	GCNGC	2 cut(s)	45, 101
Fsp4HI	GCNGC	2 cut(s)	45, 101
FspBI	CTAG	2 cut(s)	260, 659
GluI	GCNGC	2 cut(s)	45, 101
GsuI	CTGGAG	2 cut(s)	170, 629
HaeIII	GGCC	3 cut(s)	245, 511, 534
HapII	CCGG	1 cut(s)	512
Hin1II	CATG	9 cut(s)	314, 454, 458, 566, 607, 656, 784, 810, 868
HincII	GTYRAC	1 cut(s)	19
HindII	GTYRAC	1 cut(s)	19
HindIII	AAGCTT	2 cut(s)	35, 848
HinfI	GANTC	3 cut(s)	142, 314, 342
HpaII	CCGG	1 cut(s)	512
Hpy166II	GTNNAC	3 cut(s)	19, 187, 517
Hpy188I	TCNGA	4 cut(s)	165, 302, 492, 835
Hpy188III	TCNNGA	6 cut(s)	149, 200, 470, 563, 646, 817
Hpy8I	GTNNAC	3 cut(s)	19, 187, 517
HpyAV	CCTTC	4 cut(s)	545, 572, 823, 835
HpyCH4III	ACNGT	4 cut(s)	191, 216, 410, 755
HpyCH4IV	ACGT	1 cut(s)	519
HpyCH4V	TGCA	6 cut(s)	76, 333, 357, 450, 454, 506
HpyF10VI	GCNNNNNNNGC	1 cut(s)	456
HpyF3I	CTNAG	4 cut(s)	131, 240, 299, 834
HpySE526I	ACGT	1 cut(s)	519
Hsp92II	CATG	9 cut(s)	314, 454, 458, 566, 607, 656, 784, 810, 868
KpnI	GGTACC	1 cut(s)	235
Ksp22I	TGATCA	1 cut(s)	559
Kzo9I	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
LmnI	GCTCC	2 cut(s)	151, 748
Lsp1109I	GCAGC	2 cut(s)	56, 112
LweI	GCATC	1 cut(s)	342
MaeI	CTAG	2 cut(s)	260, 659
MaeII	ACGT	1 cut(s)	519
MaeIII	GTNAC	1 cut(s)	727
MalI	GATC	8 cut(s)	173, 426, 443, 528, 546, 561, 597, 663
MboI	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
MboII	GAAGA	8 cut(s)	61, 137, 375, 397, 404, 451, 704, 850
MfeI	CAATTG	1 cut(s)	328
MflI	RGATCY	3 cut(s)	171, 441, 661
MluCI	AATT	5 cut(s)	287, 328, 638, 748, 761
MnlI	CCTC	8 cut(s)	79, 124, 235, 296, 308, 841, 894, 897
Mph1103I	ATGCAT	1 cut(s)	456
MroXI	GAANNNNTTC	1 cut(s)	126
MseI	TTAA	2 cut(s)	369, 869
MslI	CAYNNNNRTG	1 cut(s)	805
MspI	CCGG	1 cut(s)	512
MspR9I	CCNGG	1 cut(s)	876
MunI	CAATTG	1 cut(s)	328
MvaI	CCWGG	1 cut(s)	876
MwoI	GCNNNNNNNGC	1 cut(s)	456
NdeII	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
NlaIII	CATG	9 cut(s)	314, 454, 458, 566, 607, 656, 784, 810, 868
NlaIV	GGNNCC	2 cut(s)	233, 778
NsiI	ATGCAT	1 cut(s)	456
NspI	RCATGY	4 cut(s)	454, 607, 810, 868
PaeI	GCATGC	1 cut(s)	454
PagI	TCATGA	1 cut(s)	562
PciI	ACATGT	2 cut(s)	806, 864
PdmI	GAANNNNTTC	1 cut(s)	126
PfeI	GAWTC	3 cut(s)	142, 314, 342
PkrI	GCNGC	2 cut(s)	46, 102
PscI	ACATGT	2 cut(s)	806, 864
Psp6I	CCWGG	1 cut(s)	874
PspEI	GGTNACC	1 cut(s)	727
PspGI	CCWGG	1 cut(s)	874
PspN4I	GGNNCC	2 cut(s)	233, 778
PspPI	GGNCC	2 cut(s)	60, 532
PsuI	RGATCY	3 cut(s)	171, 441, 661
RsaI	GTAC	1 cut(s)	233
RsaNI	GTAC	1 cut(s)	232
RseI	CAYNNNNRTG	1 cut(s)	805
SalI	GTCGAC	1 cut(s)	17
SaqAI	TTAA	2 cut(s)	369, 869
SatI	GCNGC	2 cut(s)	45, 101
Sau3AI	GATC	8 cut(s)	171, 424, 441, 526, 544, 559, 595, 661
Sau96I	GGNCC	2 cut(s)	60, 532
ScrFI	CCNGG	1 cut(s)	876
SfaNI	GCATC	1 cut(s)	342
SinI	GGWCC	1 cut(s)	60
SmiMI	CAYNNNNRTG	1 cut(s)	805
SphI	GCATGC	1 cut(s)	454
Sse9I	AATT	5 cut(s)	287, 328, 638, 748, 761
SsiI	CCGC	1 cut(s)	459
SspI	AATATT	1 cut(s)	502
SspMI	CTAG	2 cut(s)	260, 659
StyD4I	CCNGG	1 cut(s)	874
StyI	CCWWGG	2 cut(s)	117, 259
TaaI	ACNGT	4 cut(s)	191, 216, 410, 755
TaiI	ACGT	1 cut(s)	522
TaqI	TCGA	1 cut(s)	18
TasI	AATT	5 cut(s)	287, 328, 638, 748, 761
TfiI	GAWTC	3 cut(s)	142, 314, 342
Tru1I	TTAA	2 cut(s)	369, 869
Tru9I	TTAA	2 cut(s)	369, 869
TseI	GCWGC	2 cut(s)	44, 100
TspDTI	ATGAA	2 cut(s)	327, 365
TspGWI	ACGGA	2 cut(s)	46, 98
VpaK11BI	GGWCC	1 cut(s)	60
XapI	RAATTY	3 cut(s)	287, 638, 761
XceI	RCATGY	4 cut(s)	454, 607, 810, 868
XmaJI	CCTAGG	1 cut(s)	259
XmiI	GTMKAC	1 cut(s)	18
XmnI	GAANNNNTTC	1 cut(s)	126
XspI	CTAG	2 cut(s)	260, 659
Zsp2I	ATGCAT	1 cut(s)	456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.