Rorug07G0034300

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
2442881 .. 2443962
1082 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0034300.1

Sequence Viewer

Length: 1044 bp
ATGTCCAAATCAAAATACAAGAAACAAACAATGGCCAGCGGTGGACCCAACTGGGAAGGATTGCTGAAGTGGAGCCTAGCTCATTCTGATGGGACTGGCCCTAACCGCAGTTTAAGCGAAGAGGATCGTAAGTGGTTCATGGAAGCAATGCAAGAGCAGACTTTCGATGTGGTGAAGCGAATGAAGGAGATCTCTCTAGTAATGCAAACTCCGGAGCATGTTTTGGAAGATCAAGGAGTTACTCCAGCTGACATTGAAGATTTGTTAGATGAGTTGCAGGAGCATGTTGAGTCCATTGACATGGCCAACGATCTTCACTCAATTGGCGGGTTGGTCCCATTACTTGGTTACTTAAAGAACTCCAATGCTAATATCAGAGCAAAAGCTGCAGAAGTTGTGACCACTATTGTGCAGAACAATCCAAAGAGCCAGAAACTTGTTATGGAAGCAAACGGCTTTGAATATCTGTTTTCTTTATTCACATCCGATCCTGTGGTTAATGTCCGAACCAAAGCGCTTGGTGCAATCTCCTCTTTGATCCGGGACAACAAACCGGGTGTCATTGCCTTTCGCAAAGAAAATAATGGGTATGAAGCCTTGCGAGATAGTCTAGCTTCTGAAAGCGCGAGATTTCAAAGGAAAGCCCTGAGTTTGATCAACTACTTACTCCGCGAGAATAGATATGATTGCATCATAGTAAACAAGTTAGGATTTCCATGCCTAATGGTGCAGCTTGCCTCTAGCAAAGATGTAGACGTGCGAGAAGGTGCACTCCAGGGCCTACTTGAGCTTGCTCGAGGGAAAACTCAAGGGATCAGAGAAGATGAGAAATTGAAGCAACTTCTTCGAAATCGAATTGAAGATGTTGGAGCAGGTAGGGAGGAGAGGCAGCTGCTAGACTCCCTGTGGAATGCATGCTACAACAAGCCATCGCCTCTTCGCGAGAAGGGGCTTCTCGTGCTTCCTGGGGAAGATGCCCCGCCACCTGATGTTGCAAGCAAGCATTTTGAACCTGCTCTTAGAGCAATGGCTCCAAAGCCTTGA

Protein Analysis

347

Amino Acids

38.77

Weight (kDa)

6.07

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fes1 PF08609 19 - 105 1.5e-11 Nucleotide exchange factor Fes1
SIL1 PF16782 82 - 226 9.9e-06 Nucleotide exchange factor SIL1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010656)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 863, 1021
AccB7I CCANNNNNTGG 1 cut(s) 344
AccI GTMKAC 1 cut(s) 753
AccII CGCG 3 cut(s) 626, 672, 942
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 5 cut(s) 39, 106, 327, 670, 980
AclWI GGATC 4 cut(s) 132, 482, 532, 821
AcoI YGGCCR 2 cut(s) 33, 303
AcuI CTGAAG 1 cut(s) 86
AfeI AGCGCT 1 cut(s) 516
AfiI CCNNNNNNNGG 1 cut(s) 344
AgsI TTSAA 6 cut(s) 257, 461, 635, 835, 860, 1010
AjiI CACGTC 1 cut(s) 757
AjnI CCWGG 2 cut(s) 774, 964
AleI CACNNNNGTG 1 cut(s) 407
AluBI AGCT 7 cut(s) 80, 248, 386, 614, 733, 790, 892
AluI AGCT 7 cut(s) 80, 248, 386, 614, 733, 790, 892
Alw21I GWGCWC 1 cut(s) 772
Alw44I GTGCAC 1 cut(s) 768
AlwI GGATC 4 cut(s) 132, 482, 532, 821
Ama87I CYCGRG 1 cut(s) 795
Aor13HI TCCGGA 1 cut(s) 211
Aor51HI AGCGCT 1 cut(s) 516
AoxI GGCC 4 cut(s) 33, 97, 303, 778
ApaLI GTGCAC 1 cut(s) 768
ApeKI GCWGC 4 cut(s) 386, 730, 889, 892
ArsI GACNNNNNNTTYG 2 cut(s) 543, 575
AspLEI GCGC 2 cut(s) 517, 626
AspS9I GGNCC 4 cut(s) 44, 98, 334, 778
AsuC2I CCSGG 2 cut(s) 542, 555
AsuHPI GGTGA 1 cut(s) 184
AsuII TTCGAA 1 cut(s) 847
AvaI CYCGRG 1 cut(s) 795
AvaII GGWCC 2 cut(s) 44, 334
BaeGI GKGCMC 1 cut(s) 772
BalI TGGCCA 2 cut(s) 35, 305
BauI CACGAG 1 cut(s) 956
Bbv12I GWGCWC 1 cut(s) 772
BbvI GCAGC 4 cut(s) 373, 742, 879, 901
BccI CCATC 2 cut(s) 83, 937
BceAI ACGGC 1 cut(s) 469
BcgI CGANNNNNNTGC 2 cut(s) 827, 861
BciT130I CCWGG 2 cut(s) 776, 966
BclI TGATCA 1 cut(s) 654
BcnI CCSGG 2 cut(s) 542, 555
BfaI CTAG 5 cut(s) 77, 197, 611, 741, 896
BfmI CTRYAG 1 cut(s) 387
BfoI RGCGCY 1 cut(s) 518
BfuAI ACCTGC 2 cut(s) 863, 1021
BglII AGATCT 1 cut(s) 189
BisI GCNGC 4 cut(s) 387, 731, 890, 893
BlsI GCNGC 4 cut(s) 388, 732, 891, 894
Bme1390I CCNGG 4 cut(s) 542, 555, 776, 966
Bme18I GGWCC 2 cut(s) 44, 334
BmeT110I CYCGRG 1 cut(s) 795
BmgBI CACGTC 1 cut(s) 757
BmgT120I GGNCC 4 cut(s) 44, 98, 334, 778
BmiI GGNNCC 4 cut(s) 46, 74, 336, 1032
BmrFI CCNGG 4 cut(s) 542, 555, 776, 966
BmrI ACTGGG 1 cut(s) 61
BmsI GCATC 2 cut(s) 699, 964
BmuI ACTGGG 1 cut(s) 61
BplI GAGNNNNNCTC 2 cut(s) 64, 96
BpmI CTGGAG 2 cut(s) 228, 758
Bpu14I TTCGAA 1 cut(s) 847
BpuEI CTTGAG 2 cut(s) 792, 806
BpuMI CCSGG 2 cut(s) 542, 555
BsaJI CCNNGG 2 cut(s) 775, 965
BsaWI WCCGGW 1 cut(s) 211
Bsc4I CCNNNNNNNGG 1 cut(s) 344
Bse1I ACTGG 2 cut(s) 56, 100
Bse3DI GCAATG 3 cut(s) 153, 561, 1032
BseAI TCCGGA 1 cut(s) 211
BseBI CCWGG 2 cut(s) 776, 966
BseDI CCNNGG 2 cut(s) 775, 965
BseGI GGATG 1 cut(s) 482
BseLI CCNNNNNNNGG 1 cut(s) 344
BseMI GCAATG 3 cut(s) 153, 561, 1032
BseMII CTCAG 1 cut(s) 638
BseNI ACTGG 2 cut(s) 56, 100
BseRI GAGGAG 2 cut(s) 520, 896
BseSI GKGCMC 1 cut(s) 772
BseXI GCAGC 4 cut(s) 373, 742, 879, 901
BsgI GTGCAG 2 cut(s) 431, 749
Bsh1236I CGCG 3 cut(s) 626, 672, 942
BshFI GGCC 4 cut(s) 35, 99, 305, 780
BsiHKAI GWGCWC 1 cut(s) 772
BsiHKCI CYCGRG 1 cut(s) 795
BsiSI CCGG 3 cut(s) 212, 541, 554
BslFI GGGAC 3 cut(s) 106, 320, 557
BslI CCNNNNNNNGG 1 cut(s) 344
BsmFI GGGAC 3 cut(s) 106, 320, 557
BsmI GAATGC 1 cut(s) 916
BsnI GGCC 4 cut(s) 35, 99, 305, 780
BsoBI CYCGRG 1 cut(s) 795
Bsp119I TTCGAA 1 cut(s) 847
Bsp1286I GDGCHC 1 cut(s) 772
Bsp13I TCCGGA 1 cut(s) 211
Bsp143I GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
Bsp68I TCGCGA 1 cut(s) 942
BspACI CCGC 5 cut(s) 39, 106, 327, 670, 980
BspANI GGCC 4 cut(s) 35, 99, 305, 780
BspCNI CTCAG 1 cut(s) 639
BspEI TCCGGA 1 cut(s) 211
BspFNI CGCG 3 cut(s) 626, 672, 942
BspLI GGNNCC 4 cut(s) 46, 74, 336, 1032
BspMAI CTGCAG 1 cut(s) 391
BspMI ACCTGC 2 cut(s) 863, 1021
BspPI GGATC 4 cut(s) 132, 482, 532, 821
BspT104I TTCGAA 1 cut(s) 847
BsrDI GCAATG 3 cut(s) 153, 561, 1032
BsrI ACTGG 2 cut(s) 56, 100
BssECI CCNNGG 2 cut(s) 775, 965
BssMI GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
BssSI CACGAG 1 cut(s) 956
Bst2BI CACGAG 1 cut(s) 956
Bst2UI CCWGG 2 cut(s) 776, 966
Bst6I CTCTTC 2 cut(s) 114, 942
BstAPI GCANNNNNTGC 1 cut(s) 386
BstBI TTCGAA 1 cut(s) 847
BstC8I GCNNGC 6 cut(s) 37, 735, 792, 916, 997, 1001
BstDEI CTNAG 2 cut(s) 647, 1019
BstF5I GGATG 1 cut(s) 482
BstFNI CGCG 3 cut(s) 626, 672, 942
BstH2I RGCGCY 1 cut(s) 518
BstHHI GCGC 2 cut(s) 517, 626
BstKTI GATC 8 cut(s) 127, 192, 232, 313, 490, 540, 657, 816
BstMBI GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
BstMWI GCNNNNNNNGC 6 cut(s) 105, 114, 386, 521, 958, 1022
BstNI CCWGG 2 cut(s) 776, 966
BstNSI RCATGY 3 cut(s) 221, 287, 918
BstSCI CCNGG 4 cut(s) 540, 553, 774, 964
BstSFI CTRYAG 1 cut(s) 387
BstSLI GKGCMC 1 cut(s) 772
BstUI CGCG 3 cut(s) 626, 672, 942
BstV1I GCAGC 4 cut(s) 373, 742, 879, 901
BstX2I RGATCY 1 cut(s) 189
BstXI CCANNNNNNTGG 1 cut(s) 301
BstYI RGATCY 1 cut(s) 189
BsuRI GGCC 4 cut(s) 35, 99, 305, 780
BtgZI GCGATG 1 cut(s) 915
BtrI CACGTC 1 cut(s) 757
BtsCI GGATG 1 cut(s) 482
BtuMI TCGCGA 1 cut(s) 942
BveI ACCTGC 2 cut(s) 863, 1021
Cac8I GCNNGC 6 cut(s) 37, 735, 792, 916, 997, 1001
CfoI GCGC 2 cut(s) 517, 626
Cfr13I GGNCC 4 cut(s) 44, 98, 334, 778
CviAII CATG 6 cut(s) 139, 218, 284, 301, 717, 915
DdeI CTNAG 2 cut(s) 647, 1019
DpnI GATC 8 cut(s) 126, 191, 231, 312, 489, 539, 656, 815
DpnII GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
EaeI YGGCCR 2 cut(s) 33, 303
Eam1104I CTCTTC 2 cut(s) 114, 942
EarI CTCTTC 2 cut(s) 114, 942
Eco47I GGWCC 2 cut(s) 44, 334
Eco47III AGCGCT 1 cut(s) 516
Eco57I CTGAAG 1 cut(s) 86
Eco88I CYCGRG 1 cut(s) 795
EcoO109I RGGNCCY 1 cut(s) 778
EcoRII CCWGG 2 cut(s) 774, 964
EcoT22I ATGCAT 1 cut(s) 916
FaeI CATG 6 cut(s) 142, 221, 287, 304, 720, 918
FaqI GGGAC 3 cut(s) 106, 320, 557
FatI CATG 6 cut(s) 138, 217, 283, 300, 716, 914
FauI CCCGC 2 cut(s) 320, 987
FbaI TGATCA 1 cut(s) 654
FblI GTMKAC 1 cut(s) 753
Fnu4HI GCNGC 4 cut(s) 387, 731, 890, 893
FokI GGATG 1 cut(s) 469
Fsp4HI GCNGC 4 cut(s) 387, 731, 890, 893
FspBI CTAG 5 cut(s) 77, 197, 611, 741, 896
GlaI GCGC 2 cut(s) 516, 625
GluI GCNGC 4 cut(s) 387, 731, 890, 893
GsuI CTGGAG 2 cut(s) 228, 758
HaeII RGCGCY 1 cut(s) 518
HaeIII GGCC 4 cut(s) 35, 99, 305, 780
HapII CCGG 3 cut(s) 212, 541, 554
HhaI GCGC 2 cut(s) 517, 626
Hin1II CATG 6 cut(s) 142, 221, 287, 304, 720, 918
Hin6I GCGC 2 cut(s) 515, 624
HinP1I GCGC 2 cut(s) 515, 624
HinfI GANTC 2 cut(s) 290, 899
HpaII CCGG 3 cut(s) 212, 541, 554
HphI GGTGA 1 cut(s) 184
Hpy166II GTNNAC 4 cut(s) 44, 700, 754, 770
Hpy188I TCNGA 6 cut(s) 88, 377, 487, 506, 619, 818
Hpy188III TCNNGA 2 cut(s) 212, 941
Hpy8I GTNNAC 4 cut(s) 44, 700, 754, 770
HpyAV CCTTC 4 cut(s) 50, 178, 758, 940
HpyCH4IV ACGT 1 cut(s) 756
HpyF10VI GCNNNNNNNGC 6 cut(s) 105, 114, 386, 521, 958, 1022
HpyF3I CTNAG 2 cut(s) 647, 1019
HpySE526I ACGT 1 cut(s) 756
Hsp92II CATG 6 cut(s) 142, 221, 287, 304, 720, 918
HspAI GCGC 2 cut(s) 515, 624
Kpn2I TCCGGA 1 cut(s) 211
Ksp22I TGATCA 1 cut(s) 654
Kzo9I GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
LmnI GCTCC 5 cut(s) 72, 214, 280, 869, 1036
Lsp1109I GCAGC 4 cut(s) 373, 742, 879, 901
LweI GCATC 2 cut(s) 699, 964
MaeI CTAG 5 cut(s) 77, 197, 611, 741, 896
MaeII ACGT 1 cut(s) 756
MaeIII GTNAC 3 cut(s) 238, 347, 397
MalI GATC 8 cut(s) 126, 191, 231, 312, 489, 539, 656, 815
MboI GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
MboII GAAGA 9 cut(s) 131, 239, 269, 305, 833, 836, 872, 929, 983
MfeI CAATTG 1 cut(s) 321
MflI RGATCY 1 cut(s) 189
MhlI GDGCHC 1 cut(s) 772
MlsI TGGCCA 2 cut(s) 35, 305
MluCI AATT 3 cut(s) 321, 830, 855
MluNI TGGCCA 2 cut(s) 35, 305
MlyI GAGTC 2 cut(s) 299, 893
MmeI TCCRAC 1 cut(s) 847
MnlI CCTC 7 cut(s) 115, 541, 748, 791, 874, 879, 945
Mox20I TGGCCA 2 cut(s) 35, 305
Mph1103I ATGCAT 1 cut(s) 916
MroI TCCGGA 1 cut(s) 211
MscI TGGCCA 2 cut(s) 35, 305
MseI TTAA 3 cut(s) 113, 353, 498
MslI CAYNNNNRTG 3 cut(s) 87, 299, 407
Msp20I TGGCCA 2 cut(s) 35, 305
MspA1I CMGCKG 3 cut(s) 39, 248, 892
MspI CCGG 3 cut(s) 212, 541, 554
MspR9I CCNGG 4 cut(s) 542, 555, 776, 966
MunI CAATTG 1 cut(s) 321
Mva1269I GAATGC 1 cut(s) 916
MvaI CCWGG 2 cut(s) 776, 966
MvnI CGCG 3 cut(s) 626, 672, 942
MwoI GCNNNNNNNGC 6 cut(s) 105, 114, 386, 521, 958, 1022
NciI CCSGG 2 cut(s) 542, 555
NdeII GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
NlaIII CATG 6 cut(s) 142, 221, 287, 304, 720, 918
NlaIV GGNNCC 4 cut(s) 46, 74, 336, 1032
NmuCI GTSAC 1 cut(s) 397
NruI TCGCGA 1 cut(s) 942
NsiI ATGCAT 1 cut(s) 916
NspI RCATGY 3 cut(s) 221, 287, 918
NspV TTCGAA 1 cut(s) 847
OliI CACNNNNGTG 1 cut(s) 407
PaeI GCATGC 1 cut(s) 918
PaeR7I CTCGAG 1 cut(s) 795
PctI GAATGC 1 cut(s) 916
PflMI CCANNNNNTGG 1 cut(s) 344
PfoI TCCNGGA 1 cut(s) 540
PkrI GCNGC 4 cut(s) 388, 732, 891, 894
PleI GAGTC 2 cut(s) 298, 893
PpsI GAGTC 2 cut(s) 298, 893
Psp6I CCWGG 2 cut(s) 774, 964
PspGI CCWGG 2 cut(s) 774, 964
PspN4I GGNNCC 4 cut(s) 46, 74, 336, 1032
PspPI GGNCC 4 cut(s) 44, 98, 334, 778
PspXI VCTCGAGB 1 cut(s) 795
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 189
PvuII CAGCTG 2 cut(s) 248, 892
RruI TCGCGA 1 cut(s) 942
RseI CAYNNNNRTG 3 cut(s) 87, 299, 407
SaqAI TTAA 3 cut(s) 113, 353, 498
SatI GCNGC 4 cut(s) 387, 731, 890, 893
Sau3AI GATC 8 cut(s) 124, 189, 229, 310, 487, 537, 654, 813
Sau96I GGNCC 4 cut(s) 44, 98, 334, 778
SchI GAGTC 2 cut(s) 299, 893
ScrFI CCNGG 4 cut(s) 542, 555, 776, 966
SduI GDGCHC 1 cut(s) 772
SfaNI GCATC 2 cut(s) 699, 964
SfcI CTRYAG 1 cut(s) 387
Sfr274I CTCGAG 1 cut(s) 795
SfuI TTCGAA 1 cut(s) 847
SinI GGWCC 2 cut(s) 44, 334
SlaI CTCGAG 1 cut(s) 795
SmiMI CAYNNNNRTG 3 cut(s) 87, 299, 407
SmlI CTYRAG 3 cut(s) 785, 795, 807
SmoI CTYRAG 3 cut(s) 785, 795, 807
SphI GCATGC 1 cut(s) 918
Sse9I AATT 3 cut(s) 321, 830, 855
SsiI CCGC 5 cut(s) 39, 106, 327, 670, 980
SspMI CTAG 5 cut(s) 77, 197, 611, 741, 896
StyD4I CCNGG 4 cut(s) 540, 553, 774, 964
TaiI ACGT 1 cut(s) 759
TaqI TCGA 4 cut(s) 165, 796, 847, 853
TasI AATT 3 cut(s) 321, 830, 855
Tru1I TTAA 3 cut(s) 113, 353, 498
Tru9I TTAA 3 cut(s) 113, 353, 498
TseFI GTSAC 1 cut(s) 397
TseI GCWGC 4 cut(s) 386, 730, 889, 892
Tsp45I GTSAC 1 cut(s) 397
TspDTI ATGAA 3 cut(s) 127, 197, 606
Van91I CCANNNNNTGG 1 cut(s) 344
VneI GTGCAC 1 cut(s) 768
VpaK11BI GGWCC 2 cut(s) 44, 334
XceI RCATGY 3 cut(s) 221, 287, 918
XhoI CTCGAG 1 cut(s) 795
XmiI GTMKAC 1 cut(s) 753
XspI CTAG 5 cut(s) 77, 197, 611, 741, 896
Zsp2I ATGCAT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.