Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0010656

Physical Location & Seq

Genomic Coordinates Reverse (-)

18226998 .. 18231411

Gene Structure 4414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1112900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 960 bp

ATGGACGAGAGTATTGTCGACGATCTTATACGAAAGCTTGTGGCTGCGAAGAATGGCCGGACCACCAAACAGGTGCAACTGACGGAAGCTGAAATACGGCAGCTTTGCTCTGCCTCCAAGGAAATCTTTCTCAGTCAGCCGAATCTTCTGGAGCTTGAAGCTCCAATTAAGATTTGTGGAGATGTTCACGGTCAGTTTTCAGATCTTTTGCGACTGTTTGAGTATGGTGGGTACCCACCAGAAGCCAATTATTTATTCCTAGGAGACTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATATGCCTTCTCCTTGCATACAAGATCAAATACAAGGAGAACTTTTTTCTCCTCAGAGGCAACCATGAATGCGCTTCCATCAACCGCATCTATGGATTCTATGATGAGTGCAAGAGAAGATTTAATGTTCGTATTTGGAAGACATTTACTGACTGCTTCAACTGTCTTCCTGTTGCTGCTCTTATTGATGAGAAGATCCTTTGCATGCATGGCGGTCTATCTCCTGATTTGAAACACTTAGATGAGATCAGGAATATTGCACGGCCAGTGGATGTGCCAGATCAGGGCCTTCTCTGTGATCTATTATGGGCTGATCCTGATAAAGATGTTGAAGGTTGGGGAGAGAATGATCGTGGCGTGTCATATACATTTGGGGCTGACAAGGTTGCTGAGTTTCTCCAGAAACATGACCTAGATCTTATTTGCCGCGCTCATCAGGTTGTGGAAGATGGATATGAGTTTTTTGGAAAAAGGAAGCTGGTTACCATATTTTCAGCTCCAAATTACTGTGGGGAGTTTGATAATGCTGGTGCCATGATGAGTGTAGATGATACATTGACATGTTCCTTCCAGATTTTGAAAGCCTCTGAGAAGAAGGGGAAGCTTGGGATAAACAACATGTTAAGACCAGGAACTCCTCCTCACAAGGGTAAGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03015 ko04022 ko04024 ko04113 ko04114 ko04218 ko04261 ko04270 ko04390 ko04510 ko04611 ko04720 ko04728 ko04750 ko04810 ko04910 ko04921 ko04931 ko05031 ko05034 ko05168 ko05205 map03015 map04022 map04024 map04113 map04114 map04218 map04261 map04270 map04390 map04510 map04611 map04720 map04728 map04750 map04810 map04910 map04921 map04931 map05031 map05034 map05168 map05205

Pfam Domains

Protein Families

Metallophos STPPase_N

Protein Analysis

320

Amino Acids

36.09

Weight (kDa)

5.6

Isoelectric Point (pI)

34.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STPPase_N	PF16891	6 - 53	9.4e-21	Serine-threonine protein phosphatase N-terminal domain
Metallophos	PF00149	55 - 248	4e-51	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010656)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64040 AT4G11240
fragaria_vesca	FvH4_5g03260
malus_domestica	MD14G1112500.v1.1 MD14G1112800.v1.1 MD14G1112900.v1.1
prunus_persica	Prupe.5G107100_v2.0.a1
pyrus_communis	pycom14g10790
rosa_chinensis	RchiOBHm_Chr7g0196511
rosa_laevigata	RLG00000004008
rosa_multiflora	Rmu_sc0013350.1_g000011 Rmu_sc0019310.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259240
rosa_rugosa	Rorug07G0034200 Rorug07G0034300
rosa_samantha	Rh7AG158400 Rh7BG160400 Rh7CG166800 Rh7DG159600
rosa_wichuraiana	Rw7G013840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	231
AccB1I	GGYRCC	2 cut(s)	231, 830
AccI	GTMKAC	1 cut(s)	18
AccII	CGCG	1 cut(s)	729
AciI	CCGC	3 cut(s)	385, 513, 727
AclWI	GGATC	2 cut(s)	490, 608
AcoI	YGGCCR	2 cut(s)	55, 563
AfaI	GTAC	1 cut(s)	233
AfiI	CCNNNNNNNGG	2 cut(s)	584, 947
AflIII	ACRYGT	2 cut(s)	860, 918
AgsI	TTSAA	5 cut(s)	158, 460, 532, 632, 880
AjnI	CCWGG	1 cut(s)	928
AjuI	GAANNNNNNNTTGG	2 cut(s)	239, 271
AluBI	AGCT	8 cut(s)	37, 89, 103, 154, 161, 778, 797, 904
AluI	AGCT	8 cut(s)	37, 89, 103, 154, 161, 778, 797, 904
Alw26I	GTCTC	2 cut(s)	258, 290
AlwI	GGATC	2 cut(s)	490, 608
AoxI	GGCC	3 cut(s)	55, 563, 586
ApeKI	GCWGC	3 cut(s)	44, 100, 476
Asp700I	GAANNNNTTC	1 cut(s)	126
Asp718I	GGTACC	1 cut(s)	231
AspA2I	CCTAGG	1 cut(s)	259
AspLEI	GCGC	2 cut(s)	374, 731
AspS9I	GGNCC	2 cut(s)	60, 586
AvaII	GGWCC	1 cut(s)	60
AvrII	CCTAGG	1 cut(s)	259
BanI	GGYRCC	2 cut(s)	231, 830
BarI	GAAGNNNNNNTAC	2 cut(s)	78, 110
BbsI	GAAGAC	2 cut(s)	446, 458
BbvI	GCAGC	3 cut(s)	31, 112, 463
BccI	CCATC	2 cut(s)	386, 743
BceAI	ACGGC	2 cut(s)	113, 578
BciT130I	CCWGG	1 cut(s)	930
BcoDI	GTCTC	2 cut(s)	258, 290
BfaI	CTAG	2 cut(s)	260, 713
BglII	AGATCT	2 cut(s)	202, 715
BisI	GCNGC	4 cut(s)	45, 101, 477, 727
BlnI	CCTAGG	1 cut(s)	259
BlsI	GCNGC	4 cut(s)	46, 102, 478, 728
Bme1390I	CCNGG	1 cut(s)	930
Bme18I	GGWCC	1 cut(s)	60
BmgT120I	GGNCC	2 cut(s)	60, 586
BmiI	GGNNCC	2 cut(s)	233, 832
BmrFI	CCNGG	1 cut(s)	930
BmsI	GCATC	1 cut(s)	396
BpiI	GAAGAC	2 cut(s)	446, 458
BpmI	CTGGAG	2 cut(s)	170, 683
BsaJI	CCNNGG	2 cut(s)	117, 259
BsaXI	ACNNNNNCTCC	2 cut(s)	255, 285
Bsc4I	CCNNNNNNNGG	2 cut(s)	584, 947
Bse1I	ACTGG	1 cut(s)	566
BseBI	CCWGG	1 cut(s)	930
BseDI	CCNNGG	2 cut(s)	117, 259
BseGI	GGATG	1 cut(s)	577
BseLI	CCNNNNNNNGG	2 cut(s)	584, 947
BseMII	CTCAG	4 cut(s)	145, 367, 681, 879
BseNI	ACTGG	1 cut(s)	566
BseRI	GAGGAG	3 cut(s)	341, 927, 930
BseXI	GCAGC	3 cut(s)	31, 112, 463
Bsh1236I	CGCG	1 cut(s)	729
BshFI	GGCC	3 cut(s)	57, 565, 588
BshNI	GGYRCC	2 cut(s)	231, 830
BsiSI	CCGG	1 cut(s)	58
BslI	CCNNNNNNNGG	2 cut(s)	584, 947
BsmAI	GTCTC	2 cut(s)	258, 290
BsmI	GAATGC	1 cut(s)	374
BsnI	GGCC	3 cut(s)	57, 565, 588
BspACI	CCGC	3 cut(s)	385, 513, 727
BspANI	GGCC	3 cut(s)	57, 565, 588
BspCNI	CTCAG	4 cut(s)	144, 366, 682, 880
BspFNI	CGCG	1 cut(s)	729
BspLI	GGNNCC	2 cut(s)	233, 832
BspPI	GGATC	2 cut(s)	490, 608
BspT107I	GGYRCC	2 cut(s)	231, 830
BsrI	ACTGG	1 cut(s)	566
BssECI	CCNNGG	2 cut(s)	117, 259
BssT1I	CCWWGG	2 cut(s)	117, 259
Bst2UI	CCWGG	1 cut(s)	930
Bst4CI	ACNGT	4 cut(s)	191, 216, 464, 809
BstC8I	GCNNGC	1 cut(s)	506
BstDEI	CTNAG	5 cut(s)	131, 353, 538, 690, 888
BstEII	GGTNACC	1 cut(s)	781
BstF5I	GGATG	1 cut(s)	577
BstFNI	CGCG	1 cut(s)	729
BstHHI	GCGC	2 cut(s)	374, 731
BstMAI	GTCTC	2 cut(s)	258, 290
BstMWI	GCNNNNNNNGC	1 cut(s)	510
BstNI	CCWGG	1 cut(s)	930
BstNSI	RCATGY	3 cut(s)	508, 864, 922
BstPI	GGTNACC	1 cut(s)	781
BstSCI	CCNGG	1 cut(s)	928
BstUI	CGCG	1 cut(s)	729
BstV1I	GCAGC	3 cut(s)	31, 112, 463
BstV2I	GAAGAC	2 cut(s)	446, 458
BstX2I	RGATCY	3 cut(s)	202, 495, 715
BstYI	RGATCY	3 cut(s)	202, 495, 715
BsuRI	GGCC	3 cut(s)	57, 565, 588
BtsCI	GGATG	1 cut(s)	577
BtsIMutI	CAGTG	1 cut(s)	573
Cac8I	GCNNGC	1 cut(s)	506
CfoI	GCGC	2 cut(s)	374, 731
Cfr13I	GGNCC	2 cut(s)	60, 586
Csp6I	GTAC	1 cut(s)	232
CviAII	CATG	7 cut(s)	365, 505, 509, 707, 835, 861, 919
CviQI	GTAC	1 cut(s)	232
DdeI	CTNAG	5 cut(s)	131, 353, 538, 690, 888
EaeI	YGGCCR	2 cut(s)	55, 563
Eco130I	CCWWGG	2 cut(s)	117, 259
Eco47I	GGWCC	1 cut(s)	60
Eco91I	GGTNACC	1 cut(s)	781
EcoO109I	RGGNCCY	1 cut(s)	586
EcoO65I	GGTNACC	1 cut(s)	781
EcoRII	CCWGG	1 cut(s)	928
EcoT14I	CCWWGG	2 cut(s)	117, 259
EcoT22I	ATGCAT	1 cut(s)	510
ErhI	CCWWGG	2 cut(s)	117, 259
FaeI	CATG	7 cut(s)	368, 508, 512, 710, 838, 864, 922
FalI	AAGNNNNNCTT	4 cut(s)	110, 142, 326, 358
FatI	CATG	7 cut(s)	364, 504, 508, 706, 834, 860, 918
FblI	GTMKAC	1 cut(s)	18
Fnu4HI	GCNGC	4 cut(s)	45, 101, 477, 727
FokI	GGATG	1 cut(s)	584
Fsp4HI	GCNGC	4 cut(s)	45, 101, 477, 727
FspBI	CTAG	2 cut(s)	260, 713
GlaI	GCGC	2 cut(s)	373, 730
GluI	GCNGC	4 cut(s)	45, 101, 477, 727
GsuI	CTGGAG	2 cut(s)	170, 683
HaeIII	GGCC	3 cut(s)	57, 565, 588
HapII	CCGG	1 cut(s)	58
HhaI	GCGC	2 cut(s)	374, 731
Hin1II	CATG	7 cut(s)	368, 508, 512, 710, 838, 864, 922
Hin6I	GCGC	2 cut(s)	372, 729
HinP1I	GCGC	2 cut(s)	372, 729
HincII	GTYRAC	1 cut(s)	19
HindII	GTYRAC	1 cut(s)	19
HindIII	AAGCTT	2 cut(s)	35, 902
HinfI	GANTC	2 cut(s)	142, 396
HpaII	CCGG	1 cut(s)	58
Hpy166II	GTNNAC	2 cut(s)	19, 187
Hpy188I	TCNGA	3 cut(s)	202, 356, 889
Hpy188III	TCNNGA	6 cut(s)	149, 524, 550, 617, 700, 871
Hpy8I	GTNNAC	2 cut(s)	19, 187
Hpy99I	CGWCG	1 cut(s)	23
HpyAV	CCTTC	5 cut(s)	317, 599, 626, 877, 889
HpyCH4III	ACNGT	4 cut(s)	191, 216, 464, 809
HpyCH4V	TGCA	6 cut(s)	76, 317, 411, 504, 508, 560
HpyF10VI	GCNNNNNNNGC	1 cut(s)	510
HpyF3I	CTNAG	5 cut(s)	131, 353, 538, 690, 888
Hsp92II	CATG	7 cut(s)	368, 508, 512, 710, 838, 864, 922
HspAI	GCGC	2 cut(s)	372, 729
KpnI	GGTACC	1 cut(s)	235
LmnI	GCTCC	3 cut(s)	151, 166, 802
Lsp1109I	GCAGC	3 cut(s)	31, 112, 463
LweI	GCATC	1 cut(s)	396
MaeI	CTAG	2 cut(s)	260, 713
MaeIII	GTNAC	1 cut(s)	781
MboII	GAAGA	8 cut(s)	61, 137, 429, 451, 458, 505, 758, 904
MflI	RGATCY	3 cut(s)	202, 495, 715
MluCI	AATT	3 cut(s)	165, 247, 802
MnlI	CCTC	6 cut(s)	124, 350, 362, 895, 948, 951
Mph1103I	ATGCAT	1 cut(s)	510
MroXI	GAANNNNTTC	1 cut(s)	126
MseI	TTAA	3 cut(s)	168, 423, 923
MslI	CAYNNNNRTG	2 cut(s)	540, 859
MspI	CCGG	1 cut(s)	58
MspR9I	CCNGG	1 cut(s)	930
Mva1269I	GAATGC	1 cut(s)	374
MvaI	CCWGG	1 cut(s)	930
MvnI	CGCG	1 cut(s)	729
MwoI	GCNNNNNNNGC	1 cut(s)	510
NlaIII	CATG	7 cut(s)	368, 508, 512, 710, 838, 864, 922
NlaIV	GGNNCC	2 cut(s)	233, 832
NsiI	ATGCAT	1 cut(s)	510
NspI	RCATGY	3 cut(s)	508, 864, 922
PaeI	GCATGC	1 cut(s)	508
PciI	ACATGT	2 cut(s)	860, 918
PctI	GAATGC	1 cut(s)	374
PdmI	GAANNNNTTC	1 cut(s)	126
PfeI	GAWTC	2 cut(s)	142, 396
PkrI	GCNGC	4 cut(s)	46, 102, 478, 728
PscI	ACATGT	2 cut(s)	860, 918
Psp6I	CCWGG	1 cut(s)	928
PspEI	GGTNACC	1 cut(s)	781
PspGI	CCWGG	1 cut(s)	928
PspN4I	GGNNCC	2 cut(s)	233, 832
PspPI	GGNCC	2 cut(s)	60, 586
PsuI	RGATCY	3 cut(s)	202, 495, 715
RsaI	GTAC	1 cut(s)	233
RsaNI	GTAC	1 cut(s)	232
RseI	CAYNNNNRTG	2 cut(s)	540, 859
SalI	GTCGAC	1 cut(s)	17
SaqAI	TTAA	3 cut(s)	168, 423, 923
SatI	GCNGC	4 cut(s)	45, 101, 477, 727
Sau96I	GGNCC	2 cut(s)	60, 586
ScrFI	CCNGG	1 cut(s)	930
SfaNI	GCATC	1 cut(s)	396
SinI	GGWCC	1 cut(s)	60
SmiMI	CAYNNNNRTG	2 cut(s)	540, 859
SphI	GCATGC	1 cut(s)	508
Sse9I	AATT	3 cut(s)	165, 247, 802
SsiI	CCGC	3 cut(s)	385, 513, 727
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	2 cut(s)	260, 713
StyD4I	CCNGG	1 cut(s)	928
StyI	CCWWGG	2 cut(s)	117, 259
TaaI	ACNGT	4 cut(s)	191, 216, 464, 809
TaqI	TCGA	1 cut(s)	18
TasI	AATT	3 cut(s)	165, 247, 802
TauI	GCSGC	1 cut(s)	729
TfiI	GAWTC	2 cut(s)	142, 396
Tru1I	TTAA	3 cut(s)	168, 423, 923
Tru9I	TTAA	3 cut(s)	168, 423, 923
TscAI	CASTG	1 cut(s)	573
TseI	GCWGC	3 cut(s)	44, 100, 476
TspDTI	ATGAA	1 cut(s)	381
TspGWI	ACGGA	1 cut(s)	98
TspRI	CASTG	1 cut(s)	573
VpaK11BI	GGWCC	1 cut(s)	60
XceI	RCATGY	3 cut(s)	508, 864, 922
XmaJI	CCTAGG	1 cut(s)	259
XmiI	GTMKAC	1 cut(s)	18
XmnI	GAANNNNTTC	1 cut(s)	126
XspI	CTAG	2 cut(s)	260, 713
Zsp2I	ATGCAT	1 cut(s)	510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.