Rorug07G0034200

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
2439047 .. 2441116
2070 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0034200.1

Sequence Viewer

Length: 1512 bp
ATGTTCGGCCAAACCAGCAGCAACACAAGTAAGAACCCTTTTGGTAGCACAACCCAATTCCAATTTGGTGCCCAAACAAGTAGACCTTTTGGAGGAGCTTCAACCAGATTCGCACCATTCGATGCTTCAACTGCTCAAACAAGTAGGTCCTTTGGTGAATTTGTAACCACAACTCAACCATCACAACCAGCTCAGAGAGGCAGTAGTCAGTTTTCATTTGGCACTAGTACTGTTCCTGCTTTTGGCCAAAAATTTGGTGCTTCGAGTTCTCCCTTTGGGGCTCAATCAACAACACAAGCAGTTGGAAACACCGCTTCTGCCGGAGGCCAACGCCAGGGAAGTAGATTGGCTGCTTACGAAGTCACACATGGACAAGACCTTAGGGCCCCCGGAACGTTTCAGTTACTGTCAATATCAGCAATGCAAGTTTACGAGAGCAAAAGCGTGGAGGAATTGCGATTTGAAGATTACCAGTTGGGGGATAAAGGTGGAAAAGCTACCATGAAGACAAACACCCCTTGCAATCCTACACCATCTTTTCCCTTTCCTCAAACATCTTCTTCTTCTTCACCTTCACCATCAATTTCATCAACTCCAGCAACCAATGCTTTTAGATGCTTTACTTCTAATTGGAGTACTTCATCTTTACCATCGATTTGTTCATCAAGTCCAGCAATCAATGCTTTTACATCCTTCAATTGTTCATCGTCAAGTCCAGCAATCAATGCTTTTACATGGACTTCATCTTCACCGTCGACTAGTTCATCGCCAAGTCCAGCAATCAATGCTTTTACATGGACTTCATCTTCACCATCGACTAGTTCATCATCAACTCCAGCAACCAATGCTTTTAAAACACCACCAACACCTACACCACCCTTTTCTTCCTTTCCTTCTCAGCCTTCTTCAAATCCATTTAATACCTCCAATAGTACTCCTCCTCCATCTTCCTTTCCTTCTTGGACTTCTTCACAATTAACTAGTCCATCACTTCCAGCGATCTTTACCTTTACAACACCTACACCTTTAATCCCACAGACACAAACATCCACTAGTACTCCGGCTCCTCCTCCTTCTTCTAAGCCGCTTTTCGACTGCTTTAAGACTCTTCAACCTAATACTACCCCCGGCTCAAACATTTTCAATCCAACACAGCCGCAGCCAAGCAACACACCCATTCTTCAGCAGAATAACTTAGTACAACAACCAGTACTAGTACCTGCTACAAATCCATTTGGAACCCCTCGCGCAACACCTCAGGTGTCGGATGGTGGTACTGTTCAGTATGGAATTTCAAGCATTCCTGTTGTGGATAGACCTGCGCCGGCTAACGTTAGGGTCTCATCTTTGTTGACTGCTAGACAACTGGTACAAAGGCACATTGGTTTTCCTGCTGCAAGTTCAAGAATATATGATCTTTATAAGAATAAGAATGGTAGTAGTCATCCCAAGGTCCCTTTTTTCAGTGATGATGCTGATCAAGCACCCAACGCGCCCAAGATCATGCTCTAG

Protein Analysis

503

Amino Acids

52.82

Weight (kDa)

9.65

Isoelectric Point (pI)

62.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 138 - 157 4.2e-08 Nup98, Gle2-binding sequence
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010656)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1422
Acc36I ACCTGC 2 cut(s) 1228, 1327
AccB1I GGYRCC 1 cut(s) 68
AccI GTMKAC 2 cut(s) 82, 755
AccII CGCG 2 cut(s) 1248, 1493
AciI CCGC 3 cut(s) 312, 1085, 1157
AclI AACGTT 2 cut(s) 395, 1332
AcoI YGGCCR 2 cut(s) 7, 244
AcsI RAATTY 3 cut(s) 158, 251, 1290
AcuI CTGAAG 1 cut(s) 1166
AfaI GTAC 9 cut(s) 229, 637, 934, 1057, 1200, 1212, 1218, 1276, 1371
AfiI CCNNNNNNNGG 4 cut(s) 92, 242, 334, 478
AgsI TTSAA 9 cut(s) 102, 129, 464, 697, 909, 1112, 1144, 1296, 1404
AhlI ACTAGT 6 cut(s) 224, 758, 818, 980, 1052, 1213
AjnI CCWGG 1 cut(s) 333
AluBI AGCT 3 cut(s) 98, 191, 497
AluI AGCT 3 cut(s) 98, 191, 497
Alw26I GTCTC 1 cut(s) 1345
AlwNI CAGNNNCTG 1 cut(s) 406
AoxI GGCC 4 cut(s) 7, 244, 325, 384
ApaI GGGCCC 1 cut(s) 388
ApeKI GCWGC 4 cut(s) 18, 350, 1159, 1394
ApoI RAATTY 3 cut(s) 158, 251, 1290
AspLEI GCGC 3 cut(s) 1250, 1324, 1495
AspS9I GGNCC 4 cut(s) 147, 384, 385, 1453
AsuC2I CCSGG 2 cut(s) 390, 1128
AsuHPI GGTGA 5 cut(s) 167, 561, 567, 741, 801
AvaII GGWCC 2 cut(s) 147, 1453
AxyI CCTNAGG 2 cut(s) 380, 1257
BaeGI GKGCMC 2 cut(s) 73, 388
BalI TGGCCA 1 cut(s) 246
BanI GGYRCC 1 cut(s) 68
BanII GRGCYC 2 cut(s) 283, 388
BbsI GAAGAC 1 cut(s) 512
BbvI GCAGC 4 cut(s) 30, 337, 1171, 1381
BccI CCATC 8 cut(s) 187, 541, 586, 658, 820, 952, 994, 1262
BciT130I CCWGG 1 cut(s) 335
BclI TGATCA 1 cut(s) 1477
BcnI CCSGG 2 cut(s) 390, 1128
BcoDI GTCTC 1 cut(s) 1345
BcuI ACTAGT 6 cut(s) 224, 758, 818, 980, 1052, 1213
BfaI CTAG 8 cut(s) 225, 759, 819, 981, 1053, 1214, 1359, 1510
BfuAI ACCTGC 2 cut(s) 1228, 1327
BisI GCNGC 6 cut(s) 19, 351, 1085, 1157, 1160, 1395
BlsI GCNGC 6 cut(s) 20, 352, 1086, 1158, 1161, 1396
BmcAI AGTACT 5 cut(s) 229, 637, 934, 1057, 1212
Bme1390I CCNGG 3 cut(s) 335, 390, 1128
Bme18I GGWCC 2 cut(s) 147, 1453
BmgT120I GGNCC 4 cut(s) 147, 384, 385, 1453
BmiI GGNNCC 6 cut(s) 70, 386, 387, 1065, 1240, 1455
BmrFI CCNGG 3 cut(s) 335, 390, 1128
BmsI GCATC 3 cut(s) 112, 605, 1462
BpiI GAAGAC 1 cut(s) 512
BpmI CTGGAG 2 cut(s) 579, 819
BpuMI CCSGG 2 cut(s) 390, 1128
Bsa29I ATCGAT 1 cut(s) 653
BsaBI GATNNNNATC 1 cut(s) 1476
BsaI GGTCTC 1 cut(s) 1345
BsaJI CCNNGG 4 cut(s) 334, 388, 1126, 1449
BsaXI ACNNNNNCTCC 6 cut(s) 925, 955, 1042, 1048, 1072, 1078
Bsc4I CCNNNNNNNGG 4 cut(s) 92, 242, 334, 478
Bse118I RCCGGY 1 cut(s) 1324
Bse1I ACTGG 3 cut(s) 472, 1208, 1371
Bse21I CCTNAGG 2 cut(s) 380, 1257
Bse3DI GCAATG 1 cut(s) 426
Bse8I GATNNNNATC 1 cut(s) 1476
BseBI CCWGG 1 cut(s) 335
BseCI ATCGAT 1 cut(s) 653
BseDI CCNNGG 4 cut(s) 334, 388, 1126, 1449
BseGI GGATG 4 cut(s) 689, 1046, 1273, 1444
BseJI GATNNNNATC 1 cut(s) 1476
BseLI CCNNNNNNNGG 4 cut(s) 92, 242, 334, 478
BseMI GCAATG 1 cut(s) 426
BseMII CTCAG 3 cut(s) 206, 911, 1271
BseNI ACTGG 3 cut(s) 472, 1208, 1371
BseRI GAGGAG 5 cut(s) 108, 927, 930, 1056, 1059
BseSI GKGCMC 2 cut(s) 73, 388
BseXI GCAGC 4 cut(s) 30, 337, 1171, 1381
Bsh1236I CGCG 2 cut(s) 1248, 1493
BshFI GGCC 4 cut(s) 9, 246, 327, 386
BshNI GGYRCC 1 cut(s) 68
BshVI ATCGAT 1 cut(s) 653
BsiSI CCGG 5 cut(s) 321, 390, 1061, 1128, 1325
BslFI GGGAC 1 cut(s) 1439
BslI CCNNNNNNNGG 4 cut(s) 92, 242, 334, 478
BsmAI GTCTC 1 cut(s) 1345
BsmFI GGGAC 1 cut(s) 1439
BsmI GAATGC 1 cut(s) 1299
BsnI GGCC 4 cut(s) 9, 246, 327, 386
Bso31I GGTCTC 1 cut(s) 1345
Bsp120I GGGCCC 1 cut(s) 384
Bsp1286I GDGCHC 3 cut(s) 73, 283, 388
Bsp143I GATC 4 cut(s) 999, 1414, 1477, 1500
BspACI CCGC 3 cut(s) 312, 1085, 1157
BspANI GGCC 4 cut(s) 9, 246, 327, 386
BspCNI CTCAG 3 cut(s) 205, 910, 1270
BspDI ATCGAT 1 cut(s) 653
BspFNI CGCG 2 cut(s) 1248, 1493
BspLI GGNNCC 6 cut(s) 70, 386, 387, 1065, 1240, 1455
BspMI ACCTGC 2 cut(s) 1228, 1327
BspT107I GGYRCC 1 cut(s) 68
BspTNI GGTCTC 1 cut(s) 1345
BsrDI GCAATG 1 cut(s) 426
BsrFI RCCGGY 1 cut(s) 1324
BsrI ACTGG 3 cut(s) 472, 1208, 1371
BssAI RCCGGY 1 cut(s) 1324
BssECI CCNNGG 4 cut(s) 334, 388, 1126, 1449
BssMI GATC 4 cut(s) 999, 1414, 1477, 1500
BssT1I CCWWGG 1 cut(s) 1449
Bst2UI CCWGG 1 cut(s) 335
Bst4CI ACNGT 4 cut(s) 232, 408, 753, 1279
Bst6I CTCTTC 1 cut(s) 1113
BstAPI GCANNNNNTGC 5 cut(s) 605, 680, 725, 785, 845
BstC8I GCNNGC 1 cut(s) 1326
BstDEI CTNAG 6 cut(s) 192, 380, 897, 1080, 1195, 1257
BstENI CCTNNNNNAGG 1 cut(s) 90
BstF5I GGATG 4 cut(s) 689, 1046, 1273, 1444
BstFNI CGCG 2 cut(s) 1248, 1493
BstHHI GCGC 3 cut(s) 1250, 1324, 1495
BstKTI GATC 4 cut(s) 1002, 1417, 1480, 1503
BstMAI GTCTC 1 cut(s) 1345
BstMBI GATC 4 cut(s) 999, 1414, 1477, 1500
BstMWI GCNNNNNNNGC 9 cut(s) 15, 131, 605, 680, 725, 785, 845, 1481, 1490
BstNI CCWGG 1 cut(s) 335
BstSCI CCNGG 3 cut(s) 333, 388, 1126
BstSLI GKGCMC 2 cut(s) 73, 388
BstUI CGCG 2 cut(s) 1248, 1493
BstV1I GCAGC 4 cut(s) 30, 337, 1171, 1381
BstV2I GAAGAC 1 cut(s) 512
BstXI CCANNNNNNTGG 1 cut(s) 254
Bsu15I ATCGAT 1 cut(s) 653
Bsu36I CCTNAGG 2 cut(s) 380, 1257
BsuRI GGCC 4 cut(s) 9, 246, 327, 386
BsuTUI ATCGAT 1 cut(s) 653
BtgZI GCGATG 1 cut(s) 750
BtsCI GGATG 4 cut(s) 689, 1046, 1273, 1444
BtsIMutI CAGTG 1 cut(s) 1471
BveI ACCTGC 2 cut(s) 1228, 1327
Cac8I GCNNGC 1 cut(s) 1326
CaiI CAGNNNCTG 1 cut(s) 406
CfoI GCGC 3 cut(s) 1250, 1324, 1495
Cfr10I RCCGGY 1 cut(s) 1324
Cfr13I GGNCC 4 cut(s) 147, 384, 385, 1453
ClaI ATCGAT 1 cut(s) 653
Csp6I GTAC 9 cut(s) 228, 636, 933, 1056, 1199, 1211, 1217, 1275, 1370
CviAII CATG 5 cut(s) 368, 502, 735, 795, 1504
CviQI GTAC 9 cut(s) 228, 636, 933, 1056, 1199, 1211, 1217, 1275, 1370
DdeI CTNAG 6 cut(s) 192, 380, 897, 1080, 1195, 1257
DpnI GATC 4 cut(s) 1001, 1416, 1479, 1502
DpnII GATC 4 cut(s) 999, 1414, 1477, 1500
DraI TTTAAA 1 cut(s) 853
EaeI YGGCCR 2 cut(s) 7, 244
Eam1104I CTCTTC 1 cut(s) 1113
EarI CTCTTC 1 cut(s) 1113
Eco130I CCWWGG 1 cut(s) 1449
Eco24I GRGCYC 2 cut(s) 283, 388
Eco31I GGTCTC 1 cut(s) 1345
Eco47I GGWCC 2 cut(s) 147, 1453
Eco57I CTGAAG 1 cut(s) 1166
Eco81I CCTNAGG 2 cut(s) 380, 1257
EcoNI CCTNNNNNAGG 1 cut(s) 90
EcoO109I RGGNCCY 4 cut(s) 147, 384, 385, 1453
EcoRII CCWGG 1 cut(s) 333
EcoT14I CCWWGG 1 cut(s) 1449
EcoT38I GRGCYC 2 cut(s) 283, 388
ErhI CCWWGG 1 cut(s) 1449
FaeI CATG 5 cut(s) 371, 505, 738, 798, 1507
FaiI YATR 9 cut(s) 369, 503, 736, 796, 1287, 1411, 1413, 1422, 1505
FalI AAGNNNNNCTT 2 cut(s) 70, 102
FaqI GGGAC 1 cut(s) 1439
FatI CATG 5 cut(s) 367, 501, 734, 794, 1503
FbaI TGATCA 1 cut(s) 1477
FblI GTMKAC 2 cut(s) 82, 755
Fnu4HI GCNGC 6 cut(s) 19, 351, 1085, 1157, 1160, 1395
FokI GGATG 4 cut(s) 676, 1033, 1280, 1431
FriOI GRGCYC 2 cut(s) 283, 388
Fsp4HI GCNGC 6 cut(s) 19, 351, 1085, 1157, 1160, 1395
FspBI CTAG 8 cut(s) 225, 759, 819, 981, 1053, 1214, 1359, 1510
GlaI GCGC 3 cut(s) 1249, 1323, 1494
GluI GCNGC 6 cut(s) 19, 351, 1085, 1157, 1160, 1395
GsuI CTGGAG 2 cut(s) 579, 819
HaeIII GGCC 4 cut(s) 9, 246, 327, 386
HapII CCGG 5 cut(s) 321, 390, 1061, 1128, 1325
HhaI GCGC 3 cut(s) 1250, 1324, 1495
Hin1II CATG 5 cut(s) 371, 505, 738, 798, 1507
Hin6I GCGC 3 cut(s) 1248, 1322, 1493
HinP1I GCGC 3 cut(s) 1248, 1322, 1493
HincII GTYRAC 2 cut(s) 756, 1353
HindII GTYRAC 2 cut(s) 756, 1353
HinfI GANTC 2 cut(s) 108, 1105
HpaII CCGG 5 cut(s) 321, 390, 1061, 1128, 1325
HphI GGTGA 5 cut(s) 167, 561, 567, 741, 801
Hpy166II GTNNAC 4 cut(s) 83, 430, 756, 1353
Hpy188I TCNGA 2 cut(s) 195, 1267
Hpy188III TCNNGA 1 cut(s) 1404
Hpy8I GTNNAC 4 cut(s) 83, 430, 756, 1353
Hpy99I CGWCG 1 cut(s) 757
HpyAV CCTTC 6 cut(s) 582, 703, 903, 912, 966, 1083
HpyCH4III ACNGT 4 cut(s) 232, 408, 753, 1279
HpyCH4IV ACGT 2 cut(s) 395, 1332
HpyCH4V TGCA 3 cut(s) 424, 522, 1397
HpyF10VI GCNNNNNNNGC 9 cut(s) 15, 131, 605, 680, 725, 785, 845, 1481, 1490
HpyF3I CTNAG 6 cut(s) 192, 380, 897, 1080, 1195, 1257
HpySE526I ACGT 2 cut(s) 395, 1332
Hsp92II CATG 5 cut(s) 371, 505, 738, 798, 1507
HspAI GCGC 3 cut(s) 1248, 1322, 1493
KroI GCCGGC 1 cut(s) 1324
KroNI GCCGGC 1 cut(s) 1326
Ksp22I TGATCA 1 cut(s) 1477
Kzo9I GATC 4 cut(s) 999, 1414, 1477, 1500
LmnI GCTCC 2 cut(s) 95, 1069
Lsp1109I GCAGC 4 cut(s) 30, 337, 1171, 1381
LweI GCATC 3 cut(s) 112, 605, 1462
MaeI CTAG 8 cut(s) 225, 759, 819, 981, 1053, 1214, 1359, 1510
MaeII ACGT 2 cut(s) 395, 1332
MaeIII GTNAC 3 cut(s) 163, 361, 402
MalI GATC 4 cut(s) 1001, 1416, 1479, 1502
MboI GATC 4 cut(s) 999, 1414, 1477, 1500
MfeI CAATTG 1 cut(s) 697
MhlI GDGCHC 3 cut(s) 73, 283, 388
MlsI TGGCCA 1 cut(s) 246
MluNI TGGCCA 1 cut(s) 246
MlyI GAGTC 1 cut(s) 1099
MmeI TCCRAC 3 cut(s) 283, 1172, 1245
Mox20I TGGCCA 1 cut(s) 246
MroNI GCCGGC 1 cut(s) 1324
MscI TGGCCA 1 cut(s) 246
MseI TTAA 5 cut(s) 852, 918, 977, 1028, 1101
Msp20I TGGCCA 1 cut(s) 246
MspI CCGG 5 cut(s) 321, 390, 1061, 1128, 1325
MspR9I CCNGG 3 cut(s) 335, 390, 1128
MunI CAATTG 1 cut(s) 697
Mva1269I GAATGC 1 cut(s) 1299
MvaI CCWGG 1 cut(s) 335
MvnI CGCG 2 cut(s) 1248, 1493
MwoI GCNNNNNNNGC 9 cut(s) 15, 131, 605, 680, 725, 785, 845, 1481, 1490
NaeI GCCGGC 1 cut(s) 1326
NciI CCSGG 2 cut(s) 390, 1128
NdeII GATC 4 cut(s) 999, 1414, 1477, 1500
NgoMIV GCCGGC 1 cut(s) 1324
NlaIII CATG 5 cut(s) 371, 505, 738, 798, 1507
NlaIV GGNNCC 6 cut(s) 70, 386, 387, 1065, 1240, 1455
NmuCI GTSAC 1 cut(s) 361
PcsI WCGNNNNNNNCGW 1 cut(s) 117
PctI GAATGC 1 cut(s) 1299
PdiI GCCGGC 1 cut(s) 1326
PfeI GAWTC 1 cut(s) 108
PkrI GCNGC 6 cut(s) 20, 352, 1086, 1158, 1161, 1396
PleI GAGTC 1 cut(s) 1099
PpsI GAGTC 1 cut(s) 1099
PpuMI RGGWCCY 2 cut(s) 147, 1453
PsiI TTATAA 1 cut(s) 1422
Psp1406I AACGTT 2 cut(s) 395, 1332
Psp5II RGGWCCY 2 cut(s) 147, 1453
Psp6I CCWGG 1 cut(s) 333
PspGI CCWGG 1 cut(s) 333
PspN4I GGNNCC 6 cut(s) 70, 386, 387, 1065, 1240, 1455
PspOMI GGGCCC 1 cut(s) 384
PspPI GGNCC 4 cut(s) 147, 384, 385, 1453
PspPPI RGGWCCY 2 cut(s) 147, 1453
PstNI CAGNNNCTG 1 cut(s) 406
RsaI GTAC 9 cut(s) 229, 637, 934, 1057, 1200, 1212, 1218, 1276, 1371
RsaNI GTAC 9 cut(s) 228, 636, 933, 1056, 1199, 1211, 1217, 1275, 1370
SalI GTCGAC 1 cut(s) 754
SaqAI TTAA 5 cut(s) 852, 918, 977, 1028, 1101
SatI GCNGC 6 cut(s) 19, 351, 1085, 1157, 1160, 1395
Sau3AI GATC 4 cut(s) 999, 1414, 1477, 1500
Sau96I GGNCC 4 cut(s) 147, 384, 385, 1453
ScaI AGTACT 5 cut(s) 229, 637, 934, 1057, 1212
SchI GAGTC 1 cut(s) 1099
ScrFI CCNGG 3 cut(s) 335, 390, 1128
SduI GDGCHC 3 cut(s) 73, 283, 388
SfaNI GCATC 3 cut(s) 112, 605, 1462
SinI GGWCC 2 cut(s) 147, 1453
SpeI ACTAGT 6 cut(s) 224, 758, 818, 980, 1052, 1213
SsiI CCGC 3 cut(s) 312, 1085, 1157
SspMI CTAG 8 cut(s) 225, 759, 819, 981, 1053, 1214, 1359, 1510
StyD4I CCNGG 3 cut(s) 333, 388, 1126
StyI CCWWGG 1 cut(s) 1449
TaaI ACNGT 4 cut(s) 232, 408, 753, 1279
TaiI ACGT 2 cut(s) 398, 1335
TaqI TCGA 6 cut(s) 120, 263, 653, 755, 815, 1092
TatI WGTACW 6 cut(s) 227, 635, 932, 1055, 1198, 1210
TauI GCSGC 2 cut(s) 1087, 1159
TfiI GAWTC 1 cut(s) 108
Tru1I TTAA 5 cut(s) 852, 918, 977, 1028, 1101
Tru9I TTAA 5 cut(s) 852, 918, 977, 1028, 1101
TscAI CASTG 1 cut(s) 1471
TseFI GTSAC 1 cut(s) 361
TseI GCWGC 4 cut(s) 18, 350, 1159, 1394
Tsp45I GTSAC 1 cut(s) 361
TspRI CASTG 1 cut(s) 1471
VpaK11BI GGWCC 2 cut(s) 147, 1453
XagI CCTNNNNNAGG 1 cut(s) 90
XapI RAATTY 3 cut(s) 158, 251, 1290
XcmI CCANNNNNNNNNTGG 1 cut(s) 62
XmiI GTMKAC 2 cut(s) 82, 755
XspI CTAG 8 cut(s) 225, 759, 819, 981, 1053, 1214, 1359, 1510
ZrmI AGTACT 5 cut(s) 229, 637, 934, 1057, 1212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.