AT1G64760

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
24054051 .. 24056491
2441 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G64760.1

Sequence Viewer

Length: 1446 bp
ATGTCGAATCTGTTGGCTCTCGTCGTCGGATTCGTAATCGTAATTGGTCATTTGGGTATTTTGGTAAATGGGTTGGGTGTGAATTGGGGAACAATGGCTACACATAAGCTACCTCCAAAGACAGTGGTTCAGATGCTTAAAGACAATAACATCAACAAAGTTAAGCTTTTTGATGCGGACGAGACAACCATGGGTGCACTCGCTGGATCGGGTCTTGAAGTGATGGTCGCTATTCCCAATGATCAGCTTAAGGTTATGACTAGTTACGACCGAGCCAAAGATTGGGTTCGTAAGAATGTCACTCGTTATAACTTCGATGGTGGTGTCAATATCACGTTTGTAGCTGTTGGGAATGAGCCATTCCTCAAATCATACAATGGATCGTTCATAAACCTCACATTCCCTGCACTTGCGAACATTCAAAACGCTTTAAATGAAGCCGGACTAGGAAACTCTGTCAAAGCAACAGTCCCTTTAAACGCGGATGTATACGATTCACCAGCAAGCAATCCCGTTCCATCTGCAGGAAGATTCCGTCCCGATATCATCGGTCAAATGACTCAGATTGTTGACTTTCTTGGCAAGAACAATGCTCCCATCACAATTAACATCTACCCTTTCTTAAGTCTCTATGGGAATGATGATTTCCCACTCAACTACGCCTTCTTCGATGGTGCTGAACCGATAAACGACAACGGTATTGATTATACAAACGTTTTCGATGCCAATTTCGATACTTTGGTGTCGTCTTTGAAAGCTGTTGGTCACGGAGATATGCCAATAATCGTTGGAGAAGTTGGTTGGCCAACAGAGGGTGACAAACACGCTAATGCAGGCAGTGCTTACAGATTCTACAACGGGCTTTTACCGAGGCTTGGAACAAACAAAGGAACTCCATTGAGACCAACCTACATTGAGGTATACTTGTTCGGATTACTCGACGAGGATGCAAAAAGTATAGCACCGGGACCGTTCGAACGCCATTGGGGAATATTTAAATTCGACGGGCAACCAAAGTTTCCTATAGATCTTTCAGGTCAAGGACAGAGTAAGTTCTTGATTGGTGCACAAAACGTGCCGTATCTACCCAACAAGTGGTGTACGTTTAATCCAGAAGCCAAGGACTTGACAAAACTCGCGGCTAATATAGATTACGCCTGCACTTTCTCTGATTGCACGGCGCTTGGATACGGATCTTCTTGCAATACTCTTGATGCAAATGGAAACGCGTCGTATGCGTTTAACATGTTCTTTCAAGTGAAGAATCAAGATGAGAGTGCTTGCTATTTTCAAGGTTTGGCCACCATTACAACGCAGAATATATCTCAAGGACAATGCAATTTCCCTATTCAGATTGTGGCTTCCTCAGCCTCTTCTTTTTCTTGTTCGTCTTATTCTTTGGTTGTGTTGATCGTTTGGTTTCTGTTATCAGGGATGATGTTTTGA

Protein Analysis

481

Amino Acids

52.28

Weight (kDa)

5.01

Isoelectric Point (pI)

34.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_17 PF00332 25 - 343 9.2e-62 Glycosyl hydrolases family 17
X8 PF07983 365 - 435 1.6e-14 X8 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 309
AccB7I CCANNNNNTGG 2 cut(s) 282, 1095
AccI GTMKAC 2 cut(s) 489, 921
AccII CGCG 3 cut(s) 482, 1139, 1229
AciI CCGC 3 cut(s) 176, 482, 1139
AclI AACGTT 1 cut(s) 714
AclWI GGATC 3 cut(s) 214, 388, 1201
AcoI YGGCCR 2 cut(s) 803, 1299
AcsI RAATTY 1 cut(s) 998
AfaI GTAC 1 cut(s) 1102
AfiI CCNNNNNNNGG 5 cut(s) 282, 524, 812, 875, 1095
AflII CTTAAG 2 cut(s) 248, 622
AflIII ACRYGT 2 cut(s) 1227, 1245
AgsI TTSAA 5 cut(s) 218, 422, 754, 1256, 1292
AhlI ACTAGT 1 cut(s) 260
AluBI AGCT 5 cut(s) 109, 166, 247, 344, 758
AluI AGCT 5 cut(s) 109, 166, 247, 344, 758
Alw21I GWGCWC 2 cut(s) 199, 1069
Alw26I GTCTC 3 cut(s) 176, 632, 895
Alw44I GTGCAC 2 cut(s) 195, 1065
AlwI GGATC 3 cut(s) 214, 388, 1201
AoxI GGCC 2 cut(s) 803, 1299
ApaLI GTGCAC 2 cut(s) 195, 1065
ApoI RAATTY 1 cut(s) 998
ArsI GACNNNNNNTTYG 2 cut(s) 453, 485
AspLEI GCGC 1 cut(s) 1183
AspS9I GGNCC 1 cut(s) 968
AsuC2I CCSGG 1 cut(s) 966
AsuHPI GGTGA 2 cut(s) 489, 827
AsuII TTCGAA 1 cut(s) 975
AvaII GGWCC 1 cut(s) 968
BaeGI GKGCMC 2 cut(s) 199, 1069
BaeI ACNNNNGTAYC 2 cut(s) 726, 759
BalI TGGCCA 2 cut(s) 805, 1301
Bbv12I GWGCWC 2 cut(s) 199, 1069
BbvCI CCTCAGC 1 cut(s) 1366
BccI CCATC 5 cut(s) 217, 311, 526, 605, 665
BceAI ACGGC 2 cut(s) 1063, 1194
BcgI CGANNNNNNTGC 2 cut(s) 929, 963
BciVI GTATCC 1 cut(s) 1181
BclI TGATCA 1 cut(s) 241
BcnI CCSGG 1 cut(s) 966
BcoDI GTCTC 3 cut(s) 176, 632, 895
BcuI ACTAGT 1 cut(s) 260
BfaI CTAG 2 cut(s) 261, 446
BfmI CTRYAG 2 cut(s) 522, 1023
BfoI RGCGCY 1 cut(s) 1184
BfrI CTTAAG 2 cut(s) 248, 622
BfuI GTATCC 1 cut(s) 1181
BglII AGATCT 1 cut(s) 1027
BisI GCNGC 1 cut(s) 1140
BlsI GCNGC 1 cut(s) 1141
Bme1390I CCNGG 1 cut(s) 966
Bme18I GGWCC 1 cut(s) 968
BmgT120I GGNCC 1 cut(s) 968
BmiI GGNNCC 1 cut(s) 969
BmrFI CCNGG 1 cut(s) 966
BmsI GCATC 5 cut(s) 123, 163, 712, 937, 1204
Bpu10I CCTNAGC 1 cut(s) 1366
Bpu14I TTCGAA 1 cut(s) 975
BpuEI CTTGAG 1 cut(s) 1311
BpuMI CCSGG 1 cut(s) 966
BsaBI GATNNNNATC 1 cut(s) 1192
BsaI GGTCTC 1 cut(s) 895
BsaJI CCNNGG 3 cut(s) 189, 869, 1119
Bsc4I CCNNNNNNNGG 5 cut(s) 282, 524, 812, 875, 1095
Bse8I GATNNNNATC 1 cut(s) 1192
BseDI CCNNGG 3 cut(s) 189, 869, 1119
BseGI GGATG 3 cut(s) 490, 952, 1440
BseJI GATNNNNATC 1 cut(s) 1192
BseLI CCNNNNNNNGG 5 cut(s) 282, 524, 812, 875, 1095
BseMII CTCAG 2 cut(s) 575, 1380
BseSI GKGCMC 2 cut(s) 199, 1069
BsgI GTGCAG 2 cut(s) 390, 1144
Bsh1236I CGCG 3 cut(s) 482, 1139, 1229
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 2 cut(s) 805, 1301
BsiEI CGRYCG 1 cut(s) 271
BsiHKAI GWGCWC 2 cut(s) 199, 1069
BsiSI CCGG 2 cut(s) 441, 965
BslFI GGGAC 3 cut(s) 455, 522, 981
BslI CCNNNNNNNGG 5 cut(s) 282, 524, 812, 875, 1095
BsmAI GTCTC 3 cut(s) 176, 632, 895
BsmFI GGGAC 3 cut(s) 455, 522, 981
BsnI GGCC 2 cut(s) 805, 1301
Bso31I GGTCTC 1 cut(s) 895
Bsp119I TTCGAA 1 cut(s) 975
Bsp1286I GDGCHC 2 cut(s) 199, 1069
Bsp143I GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
Bsp19I CCATGG 1 cut(s) 189
BspACI CCGC 3 cut(s) 176, 482, 1139
BspANI GGCC 2 cut(s) 805, 1301
BspCNI CTCAG 2 cut(s) 574, 1379
BspFNI CGCG 3 cut(s) 482, 1139, 1229
BspLI GGNNCC 1 cut(s) 969
BspMAI CTGCAG 1 cut(s) 526
BspPI GGATC 3 cut(s) 214, 388, 1201
BspT104I TTCGAA 1 cut(s) 975
BspTI CTTAAG 2 cut(s) 248, 622
BspTNI GGTCTC 1 cut(s) 895
BssECI CCNNGG 3 cut(s) 189, 869, 1119
BssMI GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
BssNAI GTATAC 2 cut(s) 490, 922
BssT1I CCWWGG 2 cut(s) 189, 1119
Bst1107I GTATAC 2 cut(s) 490, 922
Bst4CI ACNGT 4 cut(s) 124, 469, 698, 972
Bst6I CTCTTC 1 cut(s) 1378
BstAFI CTTAAG 2 cut(s) 248, 622
BstAPI GCANNNNNTGC 1 cut(s) 839
BstBI TTCGAA 1 cut(s) 975
BstC8I GCNNGC 4 cut(s) 505, 835, 1159, 1282
BstDEI CTNAG 2 cut(s) 561, 1366
BstDSI CCRYGG 1 cut(s) 189
BstF5I GGATG 3 cut(s) 490, 952, 1440
BstFNI CGCG 3 cut(s) 482, 1139, 1229
BstH2I RGCGCY 1 cut(s) 1184
BstHHI GCGC 1 cut(s) 1183
BstKTI GATC 6 cut(s) 209, 244, 383, 1030, 1196, 1413
BstMAI GTCTC 3 cut(s) 176, 632, 895
BstMBI GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
BstMCI CGRYCG 1 cut(s) 271
BstMWI GCNNNNNNNGC 3 cut(s) 839, 1235, 1367
BstNSI RCATGY 1 cut(s) 1249
BstSCI CCNGG 1 cut(s) 964
BstSFI CTRYAG 2 cut(s) 522, 1023
BstSLI GKGCMC 2 cut(s) 199, 1069
BstUI CGCG 3 cut(s) 482, 1139, 1229
BstX2I RGATCY 2 cut(s) 1027, 1193
BstYI RGATCY 2 cut(s) 1027, 1193
BstZ17I GTATAC 2 cut(s) 490, 922
BsuI GTATCC 1 cut(s) 1181
BsuRI GGCC 2 cut(s) 805, 1301
BtgI CCRYGG 1 cut(s) 189
BtsCI GGATG 3 cut(s) 490, 952, 1440
BtsI GCAGTG 1 cut(s) 844
BtsIMutI CAGTG 2 cut(s) 129, 844
Cac8I GCNNGC 4 cut(s) 505, 835, 1159, 1282
CfoI GCGC 1 cut(s) 1183
Cfr13I GGNCC 1 cut(s) 968
CseI GACGC 1 cut(s) 1218
Csp6I GTAC 1 cut(s) 1101
CspCI CAANNNNNGTGG 2 cut(s) 105, 140
CviAII CATG 2 cut(s) 190, 1246
CviQI GTAC 1 cut(s) 1101
DdeI CTNAG 2 cut(s) 561, 1366
DpnI GATC 6 cut(s) 208, 243, 382, 1029, 1195, 1412
DpnII GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
DraI TTTAAA 3 cut(s) 432, 477, 997
EaeI YGGCCR 2 cut(s) 803, 1299
Eam1104I CTCTTC 1 cut(s) 1378
EarI CTCTTC 1 cut(s) 1378
Eco130I CCWWGG 2 cut(s) 189, 1119
Eco31I GGTCTC 1 cut(s) 895
Eco32I GATATC 1 cut(s) 544
Eco47I GGWCC 1 cut(s) 968
EcoRV GATATC 1 cut(s) 544
EcoT14I CCWWGG 2 cut(s) 189, 1119
ErhI CCWWGG 2 cut(s) 189, 1119
FaeI CATG 2 cut(s) 193, 1249
FalI AAGNNNNNCTT 2 cut(s) 150, 182
FaqI GGGAC 3 cut(s) 455, 522, 981
FatI CATG 2 cut(s) 189, 1245
FbaI TGATCA 1 cut(s) 241
FblI GTMKAC 2 cut(s) 489, 921
Fnu4HI GCNGC 1 cut(s) 1140
FokI GGATG 2 cut(s) 497, 959
Fsp4HI GCNGC 1 cut(s) 1140
FspBI CTAG 2 cut(s) 261, 446
GlaI GCGC 1 cut(s) 1182
GluI GCNGC 1 cut(s) 1140
HaeII RGCGCY 1 cut(s) 1184
HaeIII GGCC 2 cut(s) 805, 1301
HapII CCGG 2 cut(s) 441, 965
HgaI GACGC 1 cut(s) 1218
HhaI GCGC 1 cut(s) 1183
Hin1II CATG 2 cut(s) 193, 1249
Hin6I GCGC 1 cut(s) 1181
HinP1I GCGC 1 cut(s) 1181
HincII GTYRAC 1 cut(s) 571
HindII GTYRAC 1 cut(s) 571
HindIII AAGCTT 1 cut(s) 164
HinfI GANTC 7 cut(s) 7, 30, 494, 531, 559, 849, 1264
HpaII CCGG 2 cut(s) 441, 965
HphI GGTGA 2 cut(s) 489, 827
Hpy166II GTNNAC 6 cut(s) 197, 490, 571, 922, 1067, 1101
Hpy188I TCNGA 6 cut(s) 29, 132, 564, 932, 1171, 1353
Hpy188III TCNNGA 6 cut(s) 215, 539, 1057, 1112, 1211, 1268
Hpy8I GTNNAC 6 cut(s) 197, 490, 571, 922, 1067, 1101
Hpy99I CGWCG 5 cut(s) 26, 29, 944, 1007, 1234
HpyAV CCTTC 1 cut(s) 673
HpyCH4III ACNGT 4 cut(s) 124, 469, 698, 972
HpyCH4IV ACGT 4 cut(s) 335, 714, 1074, 1103
HpyF10VI GCNNNNNNNGC 3 cut(s) 839, 1235, 1367
HpyF3I CTNAG 2 cut(s) 561, 1366
HpySE526I ACGT 4 cut(s) 335, 714, 1074, 1103
Hsp92II CATG 2 cut(s) 193, 1249
HspAI GCGC 1 cut(s) 1181
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
LmnI GCTCC 1 cut(s) 598
LweI GCATC 5 cut(s) 123, 163, 712, 937, 1204
MaeI CTAG 2 cut(s) 261, 446
MaeII ACGT 4 cut(s) 335, 714, 1074, 1103
MaeIII GTNAC 4 cut(s) 263, 298, 764, 815
MalI GATC 6 cut(s) 208, 243, 382, 1029, 1195, 1412
MboI GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
MboII GAAGA 5 cut(s) 540, 658, 1188, 1273, 1365
MflI RGATCY 2 cut(s) 1027, 1193
MhlI GDGCHC 2 cut(s) 199, 1069
MlsI TGGCCA 2 cut(s) 805, 1301
MluCI AATT 6 cut(s) 42, 82, 603, 727, 998, 1339
MluI ACGCGT 1 cut(s) 1227
MluNI TGGCCA 2 cut(s) 805, 1301
MlyI GAGTC 1 cut(s) 553
MmeI TCCRAC 2 cut(s) 7, 769
MnlI CCTC 9 cut(s) 123, 374, 404, 805, 864, 910, 937, 1375, 1381
Mox20I TGGCCA 2 cut(s) 805, 1301
MscI TGGCCA 2 cut(s) 805, 1301
MslI CAYNNNNRTG 1 cut(s) 828
Msp20I TGGCCA 2 cut(s) 805, 1301
MspCI CTTAAG 2 cut(s) 248, 622
MspI CCGG 2 cut(s) 441, 965
MspR9I CCNGG 1 cut(s) 966
MvnI CGCG 3 cut(s) 482, 1139, 1229
MwoI GCNNNNNNNGC 3 cut(s) 839, 1235, 1367
NciI CCSGG 1 cut(s) 966
NcoI CCATGG 1 cut(s) 189
NdeII GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
NlaIII CATG 2 cut(s) 193, 1249
NlaIV GGNNCC 1 cut(s) 969
NmuCI GTSAC 3 cut(s) 298, 764, 815
NspI RCATGY 1 cut(s) 1249
NspV TTCGAA 1 cut(s) 975
PciI ACATGT 1 cut(s) 1245
PcsI WCGNNNNNNNCGW 3 cut(s) 30, 666, 936
PfeI GAWTC 6 cut(s) 7, 30, 494, 531, 849, 1264
PflMI CCANNNNNTGG 2 cut(s) 282, 1095
PkrI GCNGC 1 cut(s) 1141
PleI GAGTC 1 cut(s) 553
PpsI GAGTC 1 cut(s) 553
PscI ACATGT 1 cut(s) 1245
PsiI TTATAA 1 cut(s) 309
Psp1406I AACGTT 1 cut(s) 714
PspN4I GGNNCC 1 cut(s) 969
PspPI GGNCC 1 cut(s) 968
PsrI GAACNNNNNNTAC 2 cut(s) 82, 114
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 2 cut(s) 1027, 1193
RsaI GTAC 1 cut(s) 1102
RsaNI GTAC 1 cut(s) 1101
RseI CAYNNNNRTG 1 cut(s) 828
SatI GCNGC 1 cut(s) 1140
Sau3AI GATC 6 cut(s) 206, 241, 380, 1027, 1193, 1410
Sau96I GGNCC 1 cut(s) 968
SchI GAGTC 1 cut(s) 553
ScrFI CCNGG 1 cut(s) 966
SduI GDGCHC 2 cut(s) 199, 1069
SfaNI GCATC 5 cut(s) 123, 163, 712, 937, 1204
SfcI CTRYAG 2 cut(s) 522, 1023
SfuI TTCGAA 1 cut(s) 975
SinI GGWCC 1 cut(s) 968
SmiI ATTTAAAT 1 cut(s) 997
SmiMI CAYNNNNRTG 1 cut(s) 828
SmlI CTYRAG 3 cut(s) 248, 622, 1326
SmoI CTYRAG 3 cut(s) 248, 622, 1326
SpeI ACTAGT 1 cut(s) 260
Sse9I AATT 6 cut(s) 42, 82, 603, 727, 998, 1339
SsiI CCGC 3 cut(s) 176, 482, 1139
SspI AATATT 1 cut(s) 993
SspMI CTAG 2 cut(s) 261, 446
StyD4I CCNGG 1 cut(s) 964
StyI CCWWGG 2 cut(s) 189, 1119
SwaI ATTTAAAT 1 cut(s) 997
TaaI ACNGT 4 cut(s) 124, 469, 698, 972
TaiI ACGT 4 cut(s) 338, 717, 1077, 1106
TaqI TCGA 8 cut(s) 5, 315, 669, 720, 732, 939, 975, 1002
TaqII GACCGA 2 cut(s) 285, 539
TasI AATT 6 cut(s) 42, 82, 603, 727, 998, 1339
TauI GCSGC 1 cut(s) 1142
TfiI GAWTC 6 cut(s) 7, 30, 494, 531, 849, 1264
TscAI CASTG 2 cut(s) 129, 844
TseFI GTSAC 3 cut(s) 298, 764, 815
Tsp45I GTSAC 3 cut(s) 298, 764, 815
TspDTI ATGAA 2 cut(s) 376, 450
TspGWI ACGGA 3 cut(s) 524, 783, 1206
TspRI CASTG 2 cut(s) 129, 844
Van91I CCANNNNNTGG 2 cut(s) 282, 1095
Vha464I CTTAAG 2 cut(s) 248, 622
VneI GTGCAC 2 cut(s) 195, 1065
VpaK11BI GGWCC 1 cut(s) 968
XapI RAATTY 1 cut(s) 998
XceI RCATGY 1 cut(s) 1249
XmiI GTMKAC 2 cut(s) 489, 921
XspI CTAG 2 cut(s) 261, 446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.