Prupe.7G002200_v2.0.a1

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
274812 .. 278146
3335 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G002200.1

Sequence Viewer

Length: 1458 bp
ATGGAAGGGGTATGGTTTCCCAAGTGGGTCATGCTTTTGGTTGTGTTCGGTTGCTTGTGTCTCTCTGGTTGTGTTGTTGAAGGTCTTGGTGTGAATTGGGGAACCATGGCAACCCATAAGTTGCCGCCTGAGACAGTGGTTCAGATGTTGAAGGACAATGGGATTCAGAAGGTGAAGCTTTTCGATGCAGATGAGTCTACTATGAGTGCCTTGGCTGGCAGTGGTCTTGAGGTCATGGTTGCCATACCTAATGACCAGCTTGCTGTCATGGCCACCTATAAACGGGCCAAAGAATGGGTCCGCAGGAATGTTACCCGCTACAATTTCAATGGAGGAGTTAACATCAAGTATGTAGCAGTTGGTAATGAGCCTTTCCTCACATCCTACAATGGTTCATTCCTGAATGTCACGTTCCCAGCACTTCAGAACATTCAAAATGCCCTTAATGAAGCTGGAGTTGGAGATTCGATAAAGGCTACTGTGCCCTTAAATGCAGATGTTTATAACTCACCAGATAGCAACCCTGTTCCATCTGCAGGAAGGTTCCGGAGTGATATCAGTCCACTGATGATCGCTATTGTCCAGTTCTTGGCCAAAAATAAGGCGCCTTTTACTATAAACATCTACCCTTTCCTGAGTCTATATGGCAATGATGACTTCCCATTTAACTATGCCTTCTTTGATGGGGATACCAATCCCATTGTTGATGCCACCACTGGGATTCAATACACCAATGTCTTCGATGCTAATTTTGATACCTTGGTCTCCTCCTTGAAAGCAGAGGGATTTGGGGATATGACCATTGTGGTAGGAGAGGTGGGATGGCCGACAGACGGGGACAAGAATGCCAATGCAGGTAATGCTTACAGATTTTATAATGGGCTTCTACCAAAACTTGGAACCAACAGAGGCACCCCACTGCGACCTGGATATATCGAAGTTTACTTGTTTGGACTGATTGATGAGGATGCAAAGAGCATTGCTCCAGGAAGTTTTGAGCGTCATTGGGGAATTTTCAGTTATGATGGACAGCCCAAATTCCTTGTCGATCTTTCTGGCCAGAGTCAAAACAAGTTACTAGTGCCTGCGAAGAATGTGCAATATCTTTCTAAAAAGTGGTGTATGTTTAACCCAAACGCCAAAGATGTGACCAAACTGGCAGATAATATAAATTATGCTTGCACCTATGCAGATTGCACAGCACTGGAATATGGTTCTTCTTGCAACAATTTGGACGCCAATGGCAATGCTTCGTATGCATTTAATATGTACTACCAGGTTCAGAACCAGGATGATCTGTCCTGTAACTTCGAAGGTTTGGCTACGTTGACAACGCAGAACATTTCACAGGGGAATTGCAATTTCATCATTCAGATTGCAACTTCATCTACATTTTCTCTAAGACCCTCATTGGTAGGCTTACTACTAATGTCACTGTCAGCTTTGATGTTGCTATAG

Protein Analysis

486

Amino Acids

53.11

Weight (kDa)

4.85

Isoelectric Point (pI)

35.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 504, 876
Acc36I ACCTGC 1 cut(s) 845
AccB1I GGYRCC 2 cut(s) 604, 911
AccB7I CCANNNNNTGG 3 cut(s) 294, 589, 896
AccI GTMKAC 1 cut(s) 197
AccIII TCCGGA 1 cut(s) 546
AciI CCGC 3 cut(s) 125, 301, 316
AcoI YGGCCR 4 cut(s) 270, 591, 824, 1057
AcsI RAATTY 2 cut(s) 1011, 1037
AcuI CTGAAG 1 cut(s) 407
AcyI GRCGYC 2 cut(s) 605, 1236
AfaI GTAC 1 cut(s) 1271
AfiI CCNNNNNNNGG 7 cut(s) 282, 294, 536, 589, 717, 833, 896
AgsI TTSAA 6 cut(s) 80, 151, 328, 434, 725, 775
AhlI ACTAGT 1 cut(s) 1078
AjnI CCWGG 4 cut(s) 925, 985, 1275, 1287
AjuI GAANNNNNNNTTGG 2 cut(s) 441, 473
AluBI AGCT 4 cut(s) 178, 259, 452, 1442
AluI AGCT 4 cut(s) 178, 259, 452, 1442
Alw26I GTCTC 3 cut(s) 65, 125, 769
Aor13HI TCCGGA 1 cut(s) 546
AoxI GGCC 5 cut(s) 270, 285, 591, 824, 1057
ApoI RAATTY 2 cut(s) 1011, 1037
ArsI GACNNNNNNTTYG 4 cut(s) 282, 314, 1029, 1061
Asp700I GAANNNNTTC 1 cut(s) 179
AspLEI GCGC 1 cut(s) 607
AspS9I GGNCC 2 cut(s) 285, 298
AsuHPI GGTGA 2 cut(s) 184, 501
AsuII TTCGAA 1 cut(s) 1311
AvaII GGWCC 1 cut(s) 298
BaeGI GKGCMC 1 cut(s) 486
BaeI ACNNNNGTAYC 2 cut(s) 747, 780
BalI TGGCCA 3 cut(s) 272, 593, 1059
BanI GGYRCC 2 cut(s) 604, 911
BbsI GAAGAC 1 cut(s) 730
BccI CCATC 4 cut(s) 538, 677, 816, 1019
BcgI CGANNNNNNTGC 2 cut(s) 1078, 1112
BciT130I CCWGG 4 cut(s) 927, 987, 1277, 1289
BciVI GTATCC 1 cut(s) 682
BcoDI GTCTC 3 cut(s) 65, 125, 769
BcuI ACTAGT 1 cut(s) 1078
BfaI CTAG 1 cut(s) 1079
BfmI CTRYAG 2 cut(s) 534, 1454
BfoI RGCGCY 1 cut(s) 608
BfuAI ACCTGC 1 cut(s) 845
BfuI GTATCC 1 cut(s) 682
BisI GCNGC 1 cut(s) 125
BlsI GCNGC 1 cut(s) 126
Bme1390I CCNGG 4 cut(s) 927, 987, 1277, 1289
Bme18I GGWCC 1 cut(s) 298
BmgT120I GGNCC 2 cut(s) 285, 298
BmiI GGNNCC 6 cut(s) 103, 299, 545, 606, 901, 913
BmrFI CCNGG 4 cut(s) 927, 987, 1277, 1289
BmrI ACTGGG 1 cut(s) 726
BmsI GCATC 4 cut(s) 175, 697, 733, 958
BmuI ACTGGG 1 cut(s) 726
BpiI GAAGAC 1 cut(s) 730
BplI GAGNNNNNCTC 2 cut(s) 967, 999
BpmI CTGGAG 2 cut(s) 474, 969
Bpu14I TTCGAA 1 cut(s) 1311
BpuEI CTTGAG 1 cut(s) 248
BsaBI GATNNNNATC 1 cut(s) 693
BsaHI GRCGYC 2 cut(s) 605, 1236
BsaI GGTCTC 1 cut(s) 769
BsaJI CCNNGG 3 cut(s) 105, 210, 759
BsaWI WCCGGW 1 cut(s) 546
Bsc4I CCNNNNNNNGG 7 cut(s) 282, 294, 536, 589, 717, 833, 896
Bse1I ACTGG 4 cut(s) 583, 721, 1161, 1209
Bse3DI GCAATG 3 cut(s) 655, 978, 1252
Bse8I GATNNNNATC 1 cut(s) 693
BseAI TCCGGA 1 cut(s) 546
BseBI CCWGG 4 cut(s) 927, 987, 1277, 1289
BseDI CCNNGG 3 cut(s) 105, 210, 759
BseGI GGATG 4 cut(s) 380, 827, 973, 1297
BseJI GATNNNNATC 1 cut(s) 693
BseLI CCNNNNNNNGG 7 cut(s) 282, 294, 536, 589, 717, 833, 896
BseMI GCAATG 3 cut(s) 655, 978, 1252
BseMII CTCAG 2 cut(s) 120, 626
BseNI ACTGG 4 cut(s) 583, 721, 1161, 1209
BseRI GAGGAG 2 cut(s) 348, 757
BseSI GKGCMC 1 cut(s) 486
BseYI CCCAGC 1 cut(s) 415
BshFI GGCC 5 cut(s) 272, 287, 593, 826, 1059
BshNI GGYRCC 2 cut(s) 604, 911
BsiSI CCGG 1 cut(s) 547
BslFI GGGAC 1 cut(s) 851
BslI CCNNNNNNNGG 7 cut(s) 282, 294, 536, 589, 717, 833, 896
BsmAI GTCTC 3 cut(s) 65, 125, 769
BsmFI GGGAC 1 cut(s) 851
BsmI GAATGC 1 cut(s) 850
BsnI GGCC 5 cut(s) 272, 287, 593, 826, 1059
Bso31I GGTCTC 1 cut(s) 769
Bsp119I TTCGAA 1 cut(s) 1311
Bsp1286I GDGCHC 1 cut(s) 486
Bsp13I TCCGGA 1 cut(s) 546
Bsp143I GATC 3 cut(s) 570, 1048, 1294
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 3 cut(s) 125, 301, 316
BspANI GGCC 5 cut(s) 272, 287, 593, 826, 1059
BspCNI CTCAG 2 cut(s) 121, 627
BspEI TCCGGA 1 cut(s) 546
BspLI GGNNCC 6 cut(s) 103, 299, 545, 606, 901, 913
BspMAI CTGCAG 1 cut(s) 538
BspMI ACCTGC 1 cut(s) 845
BspT104I TTCGAA 1 cut(s) 1311
BspT107I GGYRCC 2 cut(s) 604, 911
BspTNI GGTCTC 1 cut(s) 769
BsrDI GCAATG 3 cut(s) 655, 978, 1252
BsrI ACTGG 4 cut(s) 583, 721, 1161, 1209
BssECI CCNNGG 3 cut(s) 105, 210, 759
BssMI GATC 3 cut(s) 570, 1048, 1294
BssNI GRCGYC 2 cut(s) 605, 1236
BssT1I CCWWGG 3 cut(s) 105, 210, 759
Bst2UI CCWGG 4 cut(s) 927, 987, 1277, 1289
Bst4CI ACNGT 3 cut(s) 136, 481, 1437
BstACI GRCGYC 2 cut(s) 605, 1236
BstAPI GCANNNNNTGC 1 cut(s) 860
BstBI TTCGAA 1 cut(s) 1311
BstC8I GCNNGC 4 cut(s) 217, 261, 1086, 1180
BstDEI CTNAG 3 cut(s) 129, 635, 1400
BstDSI CCRYGG 1 cut(s) 105
BstF5I GGATG 4 cut(s) 380, 827, 973, 1297
BstH2I RGCGCY 1 cut(s) 608
BstHHI GCGC 1 cut(s) 607
BstKTI GATC 3 cut(s) 573, 1051, 1297
BstMAI GTCTC 3 cut(s) 65, 125, 769
BstMBI GATC 3 cut(s) 570, 1048, 1294
BstMWI GCNNNNNNNGC 3 cut(s) 269, 860, 1256
BstNI CCWGG 4 cut(s) 927, 987, 1277, 1289
BstSCI CCNGG 4 cut(s) 925, 985, 1275, 1287
BstSFI CTRYAG 2 cut(s) 534, 1454
BstSLI GKGCMC 1 cut(s) 486
BstV2I GAAGAC 1 cut(s) 730
BsuI GTATCC 1 cut(s) 682
BsuRI GGCC 5 cut(s) 272, 287, 593, 826, 1059
BtgI CCRYGG 1 cut(s) 105
BtsCI GGATG 4 cut(s) 380, 827, 973, 1297
BtsI GCAGTG 2 cut(s) 226, 917
BtsIMutI CAGTG 7 cut(s) 141, 226, 563, 714, 917, 1202, 1433
BveI ACCTGC 1 cut(s) 845
Cac8I GCNNGC 4 cut(s) 217, 261, 1086, 1180
CfoI GCGC 1 cut(s) 607
Cfr13I GGNCC 2 cut(s) 285, 298
CseI GACGC 2 cut(s) 989, 1244
CsiI ACCWGGT 1 cut(s) 1275
Csp6I GTAC 1 cut(s) 1270
CviAII CATG 4 cut(s) 31, 106, 235, 268
CviQI GTAC 1 cut(s) 1270
DdeI CTNAG 3 cut(s) 129, 635, 1400
DinI GGCGCC 1 cut(s) 606
DpnI GATC 3 cut(s) 572, 1050, 1296
DpnII GATC 3 cut(s) 570, 1048, 1294
EaeI YGGCCR 4 cut(s) 270, 591, 824, 1057
Eco130I CCWWGG 3 cut(s) 105, 210, 759
Eco31I GGTCTC 1 cut(s) 769
Eco32I GATATC 1 cut(s) 556
Eco47I GGWCC 1 cut(s) 298
Eco57I CTGAAG 1 cut(s) 407
EcoRII CCWGG 4 cut(s) 925, 985, 1275, 1287
EcoRV GATATC 1 cut(s) 556
EcoT14I CCWWGG 3 cut(s) 105, 210, 759
EcoT22I ATGCAT 1 cut(s) 1261
EgeI GGCGCC 1 cut(s) 606
EheI GGCGCC 1 cut(s) 606
ErhI CCWWGG 3 cut(s) 105, 210, 759
FaeI CATG 4 cut(s) 34, 109, 238, 271
FaqI GGGAC 1 cut(s) 851
FatI CATG 4 cut(s) 30, 105, 234, 267
FauI CCCGC 1 cut(s) 323
FblI GTMKAC 1 cut(s) 197
Fnu4HI GCNGC 1 cut(s) 125
FokI GGATG 4 cut(s) 367, 834, 980, 1304
Fsp4HI GCNGC 1 cut(s) 125
FspBI CTAG 1 cut(s) 1079
GlaI GCGC 1 cut(s) 606
GluI GCNGC 1 cut(s) 125
GsaI CCCAGC 1 cut(s) 419
GsuI CTGGAG 2 cut(s) 474, 969
HaeII RGCGCY 1 cut(s) 608
HaeIII GGCC 5 cut(s) 272, 287, 593, 826, 1059
HapII CCGG 1 cut(s) 547
HgaI GACGC 2 cut(s) 989, 1244
HhaI GCGC 1 cut(s) 607
Hin1I GRCGYC 2 cut(s) 605, 1236
Hin1II CATG 4 cut(s) 34, 109, 238, 271
Hin6I GCGC 1 cut(s) 605
HinP1I GCGC 1 cut(s) 605
HincII GTYRAC 2 cut(s) 340, 1329
HindII GTYRAC 2 cut(s) 340, 1329
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 6 cut(s) 163, 194, 464, 637, 721, 1063
HpaI GTTAAC 1 cut(s) 340
HpaII CCGG 1 cut(s) 547
HphI GGTGA 2 cut(s) 184, 501
Hpy166II GTNNAC 5 cut(s) 198, 340, 563, 943, 1329
Hpy188I TCNGA 5 cut(s) 144, 168, 426, 1284, 1374
Hpy188III TCNNGA 4 cut(s) 227, 400, 547, 634
Hpy8I GTNNAC 5 cut(s) 198, 340, 563, 943, 1329
HpyAV CCTTC 6 cut(s) 74, 145, 163, 534, 685, 1307
HpyCH4III ACNGT 3 cut(s) 136, 481, 1437
HpyCH4IV ACGT 2 cut(s) 410, 1325
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 860, 1256
HpyF3I CTNAG 3 cut(s) 129, 635, 1400
HpySE526I ACGT 2 cut(s) 410, 1325
Hsp92I GRCGYC 2 cut(s) 605, 1236
Hsp92II CATG 4 cut(s) 34, 109, 238, 271
HspAI GCGC 1 cut(s) 605
KasI GGCGCC 1 cut(s) 604
Kpn2I TCCGGA 1 cut(s) 546
KspAI GTTAAC 1 cut(s) 340
Kzo9I GATC 3 cut(s) 570, 1048, 1294
LmnI GCTCC 1 cut(s) 988
LweI GCATC 4 cut(s) 175, 697, 733, 958
MabI ACCWGGT 1 cut(s) 1275
MaeI CTAG 1 cut(s) 1079
MaeII ACGT 2 cut(s) 410, 1325
MaeIII GTNAC 6 cut(s) 310, 406, 1074, 1147, 1304, 1431
MalI GATC 3 cut(s) 572, 1050, 1296
MboI GATC 3 cut(s) 570, 1048, 1294
MboII GAAGA 3 cut(s) 730, 1102, 1209
MhlI GDGCHC 1 cut(s) 486
MlsI TGGCCA 3 cut(s) 272, 593, 1059
MluCI AATT 9 cut(s) 94, 322, 748, 1011, 1037, 1171, 1228, 1354, 1360
MluNI TGGCCA 3 cut(s) 272, 593, 1059
Mly113I GGCGCC 1 cut(s) 605
MlyI GAGTC 3 cut(s) 203, 646, 1072
MmeI TCCRAC 1 cut(s) 439
MnlI CCTC 9 cut(s) 223, 326, 386, 775, 778, 808, 902, 958, 1417
Mox20I TGGCCA 3 cut(s) 272, 593, 1059
Mph1103I ATGCAT 1 cut(s) 1261
MroI TCCGGA 1 cut(s) 546
MroXI GAANNNNTTC 1 cut(s) 179
MscI TGGCCA 3 cut(s) 272, 593, 1059
MseI TTAA 6 cut(s) 339, 444, 488, 666, 1128, 1263
Msp20I TGGCCA 3 cut(s) 272, 593, 1059
MspI CCGG 1 cut(s) 547
MspR9I CCNGG 4 cut(s) 927, 987, 1277, 1289
Mva1269I GAATGC 1 cut(s) 850
MvaI CCWGG 4 cut(s) 927, 987, 1277, 1289
MwoI GCNNNNNNNGC 3 cut(s) 269, 860, 1256
NarI GGCGCC 1 cut(s) 605
NcoI CCATGG 1 cut(s) 105
NdeII GATC 3 cut(s) 570, 1048, 1294
NlaIII CATG 4 cut(s) 34, 109, 238, 271
NlaIV GGNNCC 6 cut(s) 103, 299, 545, 606, 901, 913
NmuCI GTSAC 3 cut(s) 406, 1147, 1431
NsiI ATGCAT 1 cut(s) 1261
NspV TTCGAA 1 cut(s) 1311
PctI GAATGC 1 cut(s) 850
PdmI GAANNNNTTC 1 cut(s) 179
PfeI GAWTC 3 cut(s) 163, 464, 721
PflMI CCANNNNNTGG 3 cut(s) 294, 589, 896
PfoI TCCNGGA 1 cut(s) 985
PkrI GCNGC 1 cut(s) 126
PleI GAGTC 3 cut(s) 202, 645, 1071
PluTI GGCGCC 1 cut(s) 608
PpsI GAGTC 3 cut(s) 202, 645, 1071
PsiI TTATAA 2 cut(s) 504, 876
Psp6I CCWGG 4 cut(s) 925, 985, 1275, 1287
PspFI CCCAGC 1 cut(s) 415
PspGI CCWGG 4 cut(s) 925, 985, 1275, 1287
PspN4I GGNNCC 6 cut(s) 103, 299, 545, 606, 901, 913
PspPI GGNCC 2 cut(s) 285, 298
PstI CTGCAG 1 cut(s) 538
RsaI GTAC 1 cut(s) 1271
RsaNI GTAC 1 cut(s) 1270
SaqAI TTAA 6 cut(s) 339, 444, 488, 666, 1128, 1263
SatI GCNGC 1 cut(s) 125
Sau3AI GATC 3 cut(s) 570, 1048, 1294
Sau96I GGNCC 2 cut(s) 285, 298
SchI GAGTC 3 cut(s) 203, 646, 1072
ScrFI CCNGG 4 cut(s) 927, 987, 1277, 1289
SduI GDGCHC 1 cut(s) 486
SexAI ACCWGGT 1 cut(s) 1275
SfaNI GCATC 4 cut(s) 175, 697, 733, 958
SfcI CTRYAG 2 cut(s) 534, 1454
SfoI GGCGCC 1 cut(s) 606
SfuI TTCGAA 1 cut(s) 1311
SinI GGWCC 1 cut(s) 298
SmlI CTYRAG 1 cut(s) 227
SmoI CTYRAG 1 cut(s) 227
SpeI ACTAGT 1 cut(s) 1078
Sse9I AATT 9 cut(s) 94, 322, 748, 1011, 1037, 1171, 1228, 1354, 1360
SsiI CCGC 3 cut(s) 125, 301, 316
SspDI GGCGCC 1 cut(s) 604
SspMI CTAG 1 cut(s) 1079
StyD4I CCNGG 4 cut(s) 925, 985, 1275, 1287
StyI CCWWGG 3 cut(s) 105, 210, 759
TaaI ACNGT 3 cut(s) 136, 481, 1437
TaiI ACGT 2 cut(s) 413, 1328
TaqI TCGA 6 cut(s) 183, 467, 741, 936, 1047, 1311
TasI AATT 9 cut(s) 94, 322, 748, 1011, 1037, 1171, 1228, 1354, 1360
TatI WGTACW 1 cut(s) 1269
TauI GCSGC 1 cut(s) 127
TfiI GAWTC 3 cut(s) 163, 464, 721
Tru1I TTAA 6 cut(s) 339, 444, 488, 666, 1128, 1263
Tru9I TTAA 6 cut(s) 339, 444, 488, 666, 1128, 1263
TscAI CASTG 7 cut(s) 141, 226, 570, 721, 924, 1209, 1440
TseFI GTSAC 3 cut(s) 406, 1147, 1431
Tsp45I GTSAC 3 cut(s) 406, 1147, 1431
TspDTI ATGAA 4 cut(s) 384, 462, 1354, 1374
TspRI CASTG 7 cut(s) 141, 226, 570, 721, 924, 1209, 1440
Van91I CCANNNNNTGG 3 cut(s) 294, 589, 896
VpaK11BI GGWCC 1 cut(s) 298
XapI RAATTY 2 cut(s) 1011, 1037
XmiI GTMKAC 1 cut(s) 197
XmnI GAANNNNTTC 1 cut(s) 179
XspI CTAG 1 cut(s) 1079
Zsp2I ATGCAT 1 cut(s) 1261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.