AT1G65950

aarF domain-containing protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
24546682 .. 24551144
4463 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G65950.2

Sequence Viewer

Length: 1656 bp
ATGGAGATTCTCCGCAAATTCAAAATTCTCGGGAGATCCAAGTCTCCGATCTTTGCTTTCACAGTCACCGCCGGCCTAGCTCTAACCGCCGTCACTGGCAGCGCCACCGCCGTGTCCATCTTCCGAGACTCACCTTCCAATAAAATAGCGACGGCTGTAGAAGGCGTCGTCCGTTCTTCTCGCGCTATCTACTCCATCACTCTCACTGTCGCTGATTACAAGTATACTTTGCGTAGATTACCAGCAGATTCCGATGAGTATCTTCAGAGATTAACAGAGGTTCATTCACGGTCTGCTAAACGAATTCTTAAACTGTGTGAAAGTAATAAAGGTTTCTATGTGAAAGCTGGTCAGTTTGTGGCTACGTTGAAGCTCGTTCCGAAAGAGTACTCGTTGGCTCTTTCCTCGTTGCAGGACAAGGCAGTTCCTTGTAACTTTCAAGAAATAAAGCAAGTTCTGACAAGTAACTTGGGTCAAAATCTCACAGAGATATATTTATCTTTTGATGAGGAACCAATTGCGGCAGCATCTATTGCTCAAGTACATCATGCTGTATTGAAGAACCACCAGGAAGTAGCAGTAAAGGTGCAATACCCTGGATTGAAGCAGAACATGATGTTAGATACAATGATAATGTCATTCCTTTCAAAATCAGTCGCAAAGATATTTCCAGAATACAGATTTGATTGGCTAGTTTATGAATTCGTAAAGTCAATTTCCCAGGAACTTGATTTTCTACAGGAGGCAAAAAATTCAGAGAGAATTGCCAAAAACTTCAAACATAACAAAATGATTACAATTCCTACAGTGTTTTCGGAGTTCACAACCACTCAAGTGCTGACAATGCAGTTTTGCAAGGGTTTCAAGGTTGACGATGTGGAATCCCTCAAAAGGACTAATGTAAGTCCAGAAAAGGTTGCTAAAGTATTGGTTGAAGTGTTTGCTGAAATGATATTTGTTCACGGGTTCATACATGGCGATCCGCATCCTGGAAATATACTAGTTTCTCCTGAAGGCCAGAATGGCTTCTCTCTAGTTCTGCTAGACCATGGGAACTGTAAAACATTGGATGAAGCATTTAGGCGGGACTTTTGTCGGTTGTGGGAAGCTTTGATTCTTCTAGACTCGAACAAGATACAAGAATTAGGGAAACAGTTTGGGGTTGGAAAATATGCCAAATTCTTCCCCGTCATTTTCACCGGAAGAACTAGTGAAAGCAAATCAGGACTGGGAAAAGGAATGTCTATACAAGAGAGGCAAAAACTGAAACAGGAGCTCAAACTTCTGAGATTGGAAGACGTAACAACTTTCATGGGGTCTCTTCCACCTGACTTTCTAACCGTTCTGCGAACAGATGGACTCATACGGTCAATCACTCTAAAGTTAGGTGCTCCACAACGGGTGAGACTACTCGCTTATGCGAAATATGCGGTATACGGGCTTGGCTACAAACCAACTTCTGAACCAGATTTTGTTGAGAAGTCGGTAATCTCCAGATCTGTAATGTTAATGAGTTACCTTCGGTTACGTCTTATTCTAGAATTGATGGAACTCTTTCAAGGAATGAAGAAGCTAAAACATACCATATACGGTTTCTATGGGCAACTCGTTGGCGGTATCACAAATAGTGTAAAGCGAATTACATGCAGCGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

551

Amino Acids

62.04

Weight (kDa)

9.47

Isoelectric Point (pI)

41.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 137 - 381 2.9e-91 ABC1 atypical kinase-like domain
Pkinase PF00069 250 - 358 8.8e-07 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 224, 1434
AccII CGCG 1 cut(s) 183
AciI CCGC 9 cut(s) 13, 69, 87, 108, 521, 983, 1084, 1430, 1614
AclWI GGATC 2 cut(s) 30, 974
AcsI RAATTY 6 cut(s) 17, 24, 303, 701, 751, 1178
AcuI CTGAAG 2 cut(s) 248, 1032
AcyI GRCGYC 1 cut(s) 165
AfaI GTAC 2 cut(s) 389, 543
AfiI CCNNNNNNNGG 2 cut(s) 891, 989
AhlI ACTAGT 2 cut(s) 1000, 1208
AjnI CCWGG 4 cut(s) 567, 595, 720, 988
AleI CACNNNNGTG 2 cut(s) 110, 833
AluBI AGCT 6 cut(s) 80, 347, 373, 1109, 1276, 1573
AluI AGCT 6 cut(s) 80, 347, 373, 1109, 1276, 1573
Alw21I GWGCWC 2 cut(s) 1278, 1393
Alw26I GTCTC 4 cut(s) 48, 120, 1323, 1399
AlwI GGATC 2 cut(s) 30, 974
Ama87I CYCGRG 1 cut(s) 29
AoxI GGCC 2 cut(s) 73, 1015
ApeKI GCWGC 3 cut(s) 99, 524, 1647
ApoI RAATTY 6 cut(s) 17, 24, 303, 701, 751, 1178
Asp700I GAANNNNTTC 2 cut(s) 1025, 1554
AspLEI GCGC 2 cut(s) 104, 185
AsuHPI GGTGA 4 cut(s) 58, 123, 1189, 1414
AvaI CYCGRG 1 cut(s) 29
BanII GRGCYC 1 cut(s) 1278
BbsI GAAGAC 1 cut(s) 1302
Bbv12I GWGCWC 2 cut(s) 1278, 1393
BbvI GCAGC 2 cut(s) 111, 536
BccI CCATC 4 cut(s) 125, 203, 1349, 1540
BceAI ACGGC 3 cut(s) 74, 95, 168
BcgI CGANNNNNNTGC 1 cut(s) 1626
BciT130I CCWGG 4 cut(s) 569, 597, 722, 990
BcoDI GTCTC 4 cut(s) 48, 120, 1323, 1399
BcuI ACTAGT 2 cut(s) 1000, 1208
BfaI CTAG 8 cut(s) 77, 692, 1001, 1034, 1043, 1121, 1209, 1538
BfmI CTRYAG 3 cut(s) 156, 737, 804
BfoI RGCGCY 1 cut(s) 105
BglI GCCNNNNNGGC 1 cut(s) 1023
BglII AGATCT 1 cut(s) 1496
BisI GCNGC 4 cut(s) 100, 522, 525, 1648
BlsI GCNGC 4 cut(s) 101, 523, 526, 1649
BmcAI AGTACT 1 cut(s) 389
Bme1390I CCNGG 4 cut(s) 569, 597, 722, 990
BmeT110I CYCGRG 1 cut(s) 29
BmiI GGNNCC 1 cut(s) 513
BmrFI CCNGG 4 cut(s) 569, 597, 722, 990
BmrI ACTGGG 1 cut(s) 1238
BmsI GCATC 2 cut(s) 536, 994
BmuI ACTGGG 1 cut(s) 1238
BoxI GACNNNNGTC 1 cut(s) 1092
BpiI GAAGAC 1 cut(s) 1302
BpmI CTGGAG 1 cut(s) 1477
BpuEI CTTGAG 2 cut(s) 522, 816
BsaBI GATNNNNATC 2 cut(s) 258, 984
BsaHI GRCGYC 1 cut(s) 165
BsaI GGTCTC 1 cut(s) 1323
BsaJI CCNNGG 3 cut(s) 595, 720, 1048
BsaWI WCCGGW 1 cut(s) 1199
Bsc4I CCNNNNNNNGG 2 cut(s) 891, 989
Bse118I RCCGGY 1 cut(s) 71
Bse1I ACTGG 2 cut(s) 100, 1233
Bse8I GATNNNNATC 2 cut(s) 258, 984
BseBI CCWGG 4 cut(s) 569, 597, 722, 990
BseDI CCNNGG 3 cut(s) 595, 720, 1048
BseGI GGATG 2 cut(s) 985, 1075
BseJI GATNNNNATC 2 cut(s) 258, 984
BseLI CCNNNNNNNGG 2 cut(s) 891, 989
BseMII CTCAG 1 cut(s) 1277
BseNI ACTGG 2 cut(s) 100, 1233
BseXI GCAGC 2 cut(s) 111, 536
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 2 cut(s) 75, 1017
BsiHKAI GWGCWC 2 cut(s) 1278, 1393
BsiHKCI CYCGRG 1 cut(s) 29
BsiSI CCGG 2 cut(s) 72, 1200
BslFI GGGAC 1 cut(s) 1100
BslI CCNNNNNNNGG 2 cut(s) 891, 989
BsmAI GTCTC 4 cut(s) 48, 120, 1323, 1399
BsmFI GGGAC 1 cut(s) 1100
BsnI GGCC 2 cut(s) 75, 1017
Bso31I GGTCTC 1 cut(s) 1323
BsoBI CYCGRG 1 cut(s) 29
Bsp1286I GDGCHC 2 cut(s) 1278, 1393
Bsp143I GATC 4 cut(s) 35, 48, 979, 1496
Bsp19I CCATGG 1 cut(s) 1048
BspACI CCGC 9 cut(s) 13, 69, 87, 108, 521, 983, 1084, 1430, 1614
BspANI GGCC 2 cut(s) 75, 1017
BspCNI CTCAG 1 cut(s) 1278
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 1 cut(s) 513
BspPI GGATC 2 cut(s) 30, 974
BspTNI GGTCTC 1 cut(s) 1323
BsrFI RCCGGY 1 cut(s) 71
BsrI ACTGG 2 cut(s) 100, 1233
BssAI RCCGGY 1 cut(s) 71
BssECI CCNNGG 3 cut(s) 595, 720, 1048
BssMI GATC 4 cut(s) 35, 48, 979, 1496
BssNAI GTATAC 2 cut(s) 225, 1435
BssNI GRCGYC 1 cut(s) 165
BssT1I CCWWGG 1 cut(s) 1048
Bst1107I GTATAC 2 cut(s) 225, 1435
Bst2UI CCWGG 4 cut(s) 569, 597, 722, 990
Bst6I CTCTTC 1 cut(s) 1326
BstACI GRCGYC 1 cut(s) 165
BstAPI GCANNNNNTGC 1 cut(s) 533
BstC8I GCNNGC 1 cut(s) 73
BstDEI CTNAG 1 cut(s) 1286
BstDSI CCRYGG 1 cut(s) 1048
BstF5I GGATG 2 cut(s) 985, 1075
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 2 cut(s) 104, 185
BstKTI GATC 4 cut(s) 38, 51, 982, 1499
BstMAI GTCTC 4 cut(s) 48, 120, 1323, 1399
BstMBI GATC 4 cut(s) 35, 48, 979, 1496
BstMWI GCNNNNNNNGC 6 cut(s) 77, 86, 533, 844, 1023, 1427
BstNI CCWGG 4 cut(s) 569, 597, 722, 990
BstNSI RCATGY 1 cut(s) 1647
BstPAI GACNNNNGTC 1 cut(s) 1092
BstSCI CCNGG 4 cut(s) 567, 595, 720, 988
BstSFI CTRYAG 3 cut(s) 156, 737, 804
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 2 cut(s) 111, 536
BstV2I GAAGAC 1 cut(s) 1302
BstX2I RGATCY 2 cut(s) 35, 1496
BstYI RGATCY 2 cut(s) 35, 1496
BstZ17I GTATAC 2 cut(s) 225, 1435
BsuRI GGCC 2 cut(s) 75, 1017
BtgI CCRYGG 1 cut(s) 1048
BtsCI GGATG 2 cut(s) 985, 1075
BtsIMutI CAGTG 3 cut(s) 93, 204, 813
Cac8I GCNNGC 1 cut(s) 73
CfoI GCGC 2 cut(s) 104, 185
Cfr10I RCCGGY 1 cut(s) 71
CseI GACGC 1 cut(s) 154
Csp6I GTAC 2 cut(s) 388, 542
CviAII CATG 6 cut(s) 548, 613, 974, 1049, 1312, 1644
CviQI GTAC 2 cut(s) 388, 542
DdeI CTNAG 1 cut(s) 1286
DpnI GATC 4 cut(s) 37, 50, 981, 1498
DpnII GATC 4 cut(s) 35, 48, 979, 1496
Eam1104I CTCTTC 1 cut(s) 1326
EarI CTCTTC 1 cut(s) 1326
Ecl136II GAGCTC 1 cut(s) 1276
Eco130I CCWWGG 1 cut(s) 1048
Eco24I GRGCYC 1 cut(s) 1278
Eco31I GGTCTC 1 cut(s) 1323
Eco53kI GAGCTC 1 cut(s) 1276
Eco57I CTGAAG 2 cut(s) 248, 1032
Eco88I CYCGRG 1 cut(s) 29
EcoICRI GAGCTC 1 cut(s) 1276
EcoRI GAATTC 2 cut(s) 303, 701
EcoRII CCWGG 4 cut(s) 567, 595, 720, 988
EcoT14I CCWWGG 1 cut(s) 1048
EcoT38I GRGCYC 1 cut(s) 1278
ErhI CCWWGG 1 cut(s) 1048
FaeI CATG 6 cut(s) 551, 616, 977, 1052, 1315, 1647
FaqI GGGAC 1 cut(s) 1100
FatI CATG 6 cut(s) 547, 612, 973, 1048, 1311, 1643
FauI CCCGC 1 cut(s) 1077
FblI GTMKAC 2 cut(s) 224, 1434
Fnu4HI GCNGC 4 cut(s) 100, 522, 525, 1648
FokI GGATG 2 cut(s) 972, 1082
FriOI GRGCYC 1 cut(s) 1278
Fsp4HI GCNGC 4 cut(s) 100, 522, 525, 1648
FspBI CTAG 8 cut(s) 77, 692, 1001, 1034, 1043, 1121, 1209, 1538
GlaI GCGC 2 cut(s) 103, 184
GluI GCNGC 4 cut(s) 100, 522, 525, 1648
GsuI CTGGAG 1 cut(s) 1477
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 2 cut(s) 75, 1017
HapII CCGG 2 cut(s) 72, 1200
HgaI GACGC 1 cut(s) 154
HhaI GCGC 2 cut(s) 104, 185
Hin1I GRCGYC 1 cut(s) 165
Hin1II CATG 6 cut(s) 551, 616, 977, 1052, 1315, 1647
Hin6I GCGC 2 cut(s) 102, 183
HinP1I GCGC 2 cut(s) 102, 183
HincII GTYRAC 1 cut(s) 871
HindII GTYRAC 1 cut(s) 871
HindIII AAGCTT 1 cut(s) 1107
HinfI GANTC 7 cut(s) 7, 128, 248, 881, 1114, 1124, 1359
HpaII CCGG 2 cut(s) 72, 1200
HphI GGTGA 4 cut(s) 58, 123, 1189, 1414
Hpy166II GTNNAC 5 cut(s) 225, 822, 871, 961, 1435
Hpy188III TCNNGA 9 cut(s) 31, 440, 671, 908, 1010, 1121, 1224, 1494, 1538
Hpy8I GTNNAC 5 cut(s) 225, 822, 871, 961, 1435
Hpy99I CGWCG 2 cut(s) 154, 170
HpyAV CCTTC 4 cut(s) 144, 155, 1007, 1529
HpyCH4IV ACGT 3 cut(s) 365, 1299, 1528
HpyCH4V TGCA 5 cut(s) 412, 589, 847, 855, 1647
HpyF10VI GCNNNNNNNGC 6 cut(s) 77, 86, 533, 844, 1023, 1427
HpyF3I CTNAG 1 cut(s) 1286
HpySE526I ACGT 3 cut(s) 365, 1299, 1528
Hsp92I GRCGYC 1 cut(s) 165
Hsp92II CATG 6 cut(s) 551, 616, 977, 1052, 1315, 1647
HspAI GCGC 2 cut(s) 102, 183
KroI GCCGGC 1 cut(s) 71
KroNI GCCGGC 1 cut(s) 73
Kzo9I GATC 4 cut(s) 35, 48, 979, 1496
LmnI GCTCC 2 cut(s) 1273, 1396
Lsp1109I GCAGC 2 cut(s) 111, 536
LweI GCATC 2 cut(s) 536, 994
MaeI CTAG 8 cut(s) 77, 692, 1001, 1034, 1043, 1121, 1209, 1538
MaeII ACGT 3 cut(s) 365, 1299, 1528
MaeIII GTNAC 7 cut(s) 64, 91, 431, 464, 1300, 1514, 1524
MalI GATC 4 cut(s) 37, 50, 981, 1498
MboI GATC 4 cut(s) 35, 48, 979, 1496
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 2 cut(s) 35, 1496
MhlI GDGCHC 2 cut(s) 1278, 1393
MlyI GAGTC 3 cut(s) 122, 1118, 1353
MmeI TCCRAC 1 cut(s) 1144
MnlI CCTC 6 cut(s) 271, 415, 502, 736, 896, 1248
MroNI GCCGGC 1 cut(s) 71
MroXI GAANNNNTTC 2 cut(s) 1025, 1554
MseI TTAA 3 cut(s) 272, 309, 1508
MslI CAYNNNNRTG 2 cut(s) 110, 833
MspI CCGG 2 cut(s) 72, 1200
MspR9I CCNGG 4 cut(s) 569, 597, 722, 990
MunI CAATTG 1 cut(s) 516
MvaI CCWGG 4 cut(s) 569, 597, 722, 990
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 6 cut(s) 77, 86, 533, 844, 1023, 1427
NaeI GCCGGC 1 cut(s) 73
NcoI CCATGG 1 cut(s) 1048
NdeII GATC 4 cut(s) 35, 48, 979, 1496
NgoMIV GCCGGC 1 cut(s) 71
NlaIII CATG 6 cut(s) 551, 616, 977, 1052, 1315, 1647
NlaIV GGNNCC 1 cut(s) 513
NmuCI GTSAC 2 cut(s) 64, 91
NspI RCATGY 1 cut(s) 1647
OliI CACNNNNGTG 2 cut(s) 110, 833
PdiI GCCGGC 1 cut(s) 73
PdmI GAANNNNTTC 2 cut(s) 1025, 1554
PfeI GAWTC 4 cut(s) 7, 248, 881, 1114
PfoI TCCNGGA 1 cut(s) 988
PkrI GCNGC 4 cut(s) 101, 523, 526, 1649
PleI GAGTC 3 cut(s) 122, 1118, 1353
PpsI GAGTC 3 cut(s) 122, 1118, 1353
PshAI GACNNNNGTC 1 cut(s) 1092
Psp124BI GAGCTC 1 cut(s) 1278
Psp6I CCWGG 4 cut(s) 567, 595, 720, 988
PspGI CCWGG 4 cut(s) 567, 595, 720, 988
PspN4I GGNNCC 1 cut(s) 513
PsuI RGATCY 2 cut(s) 35, 1496
RsaI GTAC 2 cut(s) 389, 543
RsaNI GTAC 2 cut(s) 388, 542
RseI CAYNNNNRTG 2 cut(s) 110, 833
SacI GAGCTC 1 cut(s) 1278
SaqAI TTAA 3 cut(s) 272, 309, 1508
SatI GCNGC 4 cut(s) 100, 522, 525, 1648
Sau3AI GATC 4 cut(s) 35, 48, 979, 1496
ScaI AGTACT 1 cut(s) 389
SchI GAGTC 3 cut(s) 122, 1118, 1353
ScrFI CCNGG 4 cut(s) 569, 597, 722, 990
SduI GDGCHC 2 cut(s) 1278, 1393
SfaNI GCATC 2 cut(s) 536, 994
SfcI CTRYAG 3 cut(s) 156, 737, 804
SmiMI CAYNNNNRTG 2 cut(s) 110, 833
SmlI CTYRAG 2 cut(s) 537, 831
SmoI CTYRAG 2 cut(s) 537, 831
SpeI ACTAGT 2 cut(s) 1000, 1208
SsiI CCGC 9 cut(s) 13, 69, 87, 108, 521, 983, 1084, 1430, 1614
SspMI CTAG 8 cut(s) 77, 692, 1001, 1034, 1043, 1121, 1209, 1538
SstI GAGCTC 1 cut(s) 1278
StyD4I CCNGG 4 cut(s) 567, 595, 720, 988
StyI CCWWGG 1 cut(s) 1048
TaiI ACGT 3 cut(s) 368, 1302, 1531
TaqI TCGA 1 cut(s) 1127
TatI WGTACW 2 cut(s) 387, 541
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 4 cut(s) 7, 248, 881, 1114
Tru1I TTAA 3 cut(s) 272, 309, 1508
Tru9I TTAA 3 cut(s) 272, 309, 1508
TscAI CASTG 3 cut(s) 100, 211, 813
TseFI GTSAC 2 cut(s) 64, 91
TseI GCWGC 3 cut(s) 99, 524, 1647
Tsp45I GTSAC 2 cut(s) 64, 91
TspDTI ATGAA 6 cut(s) 272, 714, 958, 1086, 1300, 1580
TspGWI ACGGA 1 cut(s) 161
TspRI CASTG 3 cut(s) 100, 211, 813
XapI RAATTY 6 cut(s) 17, 24, 303, 701, 751, 1178
XbaI TCTAGA 2 cut(s) 1120, 1537
XceI RCATGY 1 cut(s) 1647
XmiI GTMKAC 2 cut(s) 224, 1434
XmnI GAANNNNTTC 2 cut(s) 1025, 1554
XspI CTAG 8 cut(s) 77, 692, 1001, 1034, 1043, 1121, 1209, 1538
ZrmI AGTACT 1 cut(s) 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.