Prupe.3G015600_v2.0.a1

AarF domain-containing protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
1115199 .. 1126722
11524 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G015600.6

Sequence Viewer

Length: 1596 bp
ATGCGGAAGGCCAAAACCGCACTCTGCTTAATCACAGCCACTGGCCTCACCTTCCATGCCTTCAACCCCAATTTTCTATCATCTTCCTCCGATTCCTTCCCCAACTTTCCTGAGAAATTACGCGCACCAATCCATGGCGTCAATCGATCTTCTCGCGCAATCGCCACCATTGCTTTCACTGCTGTTGACTACAAGTTCACTTTACATGGACTCTCGGTTGACTCTGATGAGTATCGTCAGAAGCTATCTGAGGTTCATAGAAGGTCCGCCTCAAGAATTCGGAAATTGTGTGAGGTCAATAGAGGGTTCTATGTGAAAGCTGGCCAATTTGTTGCAGCTCTGCGACAGGTTCCCAAAGAATACTCATTGACTCTTTCCTCATTGCAGGATCAGGCAGTTCCATATCATTTCAAGGCTATTAAAGAGGTACTAATCCGCAATCTGGGACCCGAGCTGTCAGATATGTTTTTGTCACTCGATGAACATCCGATAGCTGCGGCATCTATTGCTCAAGTACACCGGGGAGTTCTTAAGGGTCATCAAGAAGTAGCAATTAAGGTGCAGTACCCGGACCTGGAGCAGCAAATGAAAATAGATACAACAACCATGTATTTTCTTTCAAAATCCCTTGCTTGGTTTTTCCCAGAATACAGATTTGAGTGGCTGGTATCAGAATTCGTAGAGTCTATTTCTCTCGAACTTGACTTTATTCAGGAGGCTAGGAATTCTGAGACAACTGCCAATAACTTTGCCAACAACAAATGGGTCAAGGTTCCTCGTGTATTTTGGGACTTAACGACTCATCAAGTTCTGACGATGGAATTCTGTACAGGACAGAAGGTTGATGATGTAGAATATCTGAAGGAAAGGAGAATACACCCAATGAAGGTGGCAGAAGTGTTGTTGGAAGTGTTTGCCGAAATGATTTTCATCCATGGTTTCCTGCATGGAGATCCACACCCTGGTAACATATTAGTTTCTCCTGAAGGTCAGAATGGCTTTTCTTTGGTTATTCTAGACCATGGAATATACAAAAAATTGGATGAAGGATTTAGGTTGGATTACTGTCAGCTCTGGAAGGCATTAATTCTTCTGGACTCAAAAAACTTGCAGCGTTTGGGTGAACGGTTTGGTGTTGCAAAGTATTCTAGATACTTTCCTGTCATTTTTACGGGAAGAACTATTGACAGTAAATCGGCTCTTGGGAAGGCAATGTCAGTTGAAGAAAGACGTAATCTAAAGCAGGAGCTGAAGTCCCTGAAGATGGAAGACATATCTTCATTTATGGAATCCTTACCATCAGATTTTCTCACAATATTGCGTACTGATGGGCTGCTGAGGTCTATTGTTAGCAAGTTGGGGGCTCCACAAAGAGTCAGGTTACTAGCCTATGGCAAATATGCATTATATGGTCTTTCTCCAAAGTTGAATCCTGAATCTGATTTTGCTCTGAAAGTTGTGTTCTCCCGATTGAAGGCAAATGCAAGTTACTATAGGTTAAGGCTTATTATTGAGGTTCTACAGCTGCTTTCATGGATGGCAAAGGTCAAGCTTCTTCTGTATACTATGTATGAAAAGATAAGGTTGTGCTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

532

Amino Acids

60.87

Weight (kDa)

9.23

Isoelectric Point (pI)

36.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 134, 962
AccI GTMKAC 1 cut(s) 1562
AccII CGCG 2 cut(s) 123, 156
AciI CCGC 5 cut(s) 4, 18, 267, 436, 497
AclWI GGATC 2 cut(s) 396, 947
AcoI YGGCCR 1 cut(s) 322
AcsI RAATTY 4 cut(s) 276, 674, 724, 821
AcuI CTGAAG 4 cut(s) 881, 1005, 1271, 1280
AcyI GRCGYC 1 cut(s) 138
AfaI GTAC 5 cut(s) 429, 516, 566, 829, 1324
AfiI CCNNNNNNNGG 8 cut(s) 134, 442, 574, 633, 886, 962, 1264, 1474
AflII CTTAAG 1 cut(s) 530
AgsI TTSAA 6 cut(s) 64, 412, 621, 1223, 1429, 1474
AjnI CCWGG 2 cut(s) 573, 961
AluBI AGCT 9 cut(s) 244, 320, 338, 454, 494, 1072, 1249, 1525, 1552
AluI AGCT 9 cut(s) 244, 320, 338, 454, 494, 1072, 1249, 1525, 1552
Alw26I GTCTC 1 cut(s) 725
AlwI GGATC 2 cut(s) 396, 947
AlwNI CAGNNNCTG 2 cut(s) 41, 1249
Ama87I CYCGRG 1 cut(s) 449
AoxI GGCC 3 cut(s) 9, 43, 322
ApeKI GCWGC 6 cut(s) 335, 494, 580, 1111, 1333, 1525
ApoI RAATTY 4 cut(s) 276, 674, 724, 821
AseI ATTAAT 1 cut(s) 1085
AspLEI GCGC 2 cut(s) 125, 158
AspS9I GGNCC 3 cut(s) 264, 446, 571
AsuC2I CCSGG 2 cut(s) 521, 569
AsuHPI GGTGA 2 cut(s) 40, 1133
AvaI CYCGRG 1 cut(s) 449
AvaII GGWCC 3 cut(s) 264, 446, 571
BalI TGGCCA 1 cut(s) 324
BanII GRGCYC 1 cut(s) 1366
BauI CACGAG 1 cut(s) 777
BbsI GAAGAC 1 cut(s) 1275
BbvCI CCTCAGC 1 cut(s) 1337
BbvI GCAGC 6 cut(s) 347, 481, 592, 1123, 1320, 1512
BccI CCATC 5 cut(s) 811, 1258, 1306, 1322, 1531
BciT130I CCWGG 2 cut(s) 575, 963
BcnI CCSGG 2 cut(s) 521, 569
BcoDI GTCTC 1 cut(s) 725
BfaI CTAG 4 cut(s) 720, 1016, 1149, 1385
BfmI CTRYAG 2 cut(s) 1492, 1520
BfrI CTTAAG 1 cut(s) 530
BisI GCNGC 7 cut(s) 336, 495, 498, 581, 1112, 1334, 1526
BlsI GCNGC 7 cut(s) 337, 496, 499, 582, 1113, 1335, 1527
Bme1390I CCNGG 4 cut(s) 521, 569, 575, 963
Bme18I GGWCC 3 cut(s) 264, 446, 571
BmeT110I CYCGRG 1 cut(s) 449
BmgT120I GGNCC 3 cut(s) 264, 446, 571
BmiI GGNNCC 5 cut(s) 351, 447, 448, 774, 1365
BmrFI CCNGG 4 cut(s) 521, 569, 575, 963
BmsI GCATC 1 cut(s) 509
BpiI GAAGAC 1 cut(s) 1275
BpmI CTGGAG 1 cut(s) 596
Bpu10I CCTNAGC 1 cut(s) 1337
BpuEI CTTGAG 2 cut(s) 256, 495
BpuMI CCSGG 2 cut(s) 521, 569
Bsa29I ATCGAT 1 cut(s) 145
BsaBI GATNNNNATC 3 cut(s) 231, 483, 929
BsaHI GRCGYC 1 cut(s) 138
BsaJI CCNNGG 5 cut(s) 133, 520, 934, 961, 1021
BsaXI ACNNNNNCTCC 2 cut(s) 1238, 1268
Bsc4I CCNNNNNNNGG 8 cut(s) 134, 442, 574, 633, 886, 962, 1264, 1474
Bse1I ACTGG 1 cut(s) 46
Bse3DI GCAATG 3 cut(s) 168, 380, 1218
Bse8I GATNNNNATC 3 cut(s) 231, 483, 929
BseBI CCWGG 2 cut(s) 575, 963
BseCI ATCGAT 1 cut(s) 145
BseDI CCNNGG 5 cut(s) 133, 520, 934, 961, 1021
BseGI GGATG 4 cut(s) 484, 930, 1048, 1542
BseJI GATNNNNATC 3 cut(s) 231, 483, 929
BseLI CCNNNNNNNGG 8 cut(s) 134, 442, 574, 633, 886, 962, 1264, 1474
BseMI GCAATG 3 cut(s) 168, 380, 1218
BseMII CTCAG 4 cut(s) 102, 240, 720, 1328
BseNI ACTGG 1 cut(s) 46
BseXI GCAGC 6 cut(s) 347, 481, 592, 1123, 1320, 1512
BsgI GTGCAG 1 cut(s) 581
Bsh1236I CGCG 2 cut(s) 123, 156
BshFI GGCC 3 cut(s) 11, 45, 324
BshVI ATCGAT 1 cut(s) 145
BsiHKCI CYCGRG 1 cut(s) 449
BsiSI CCGG 2 cut(s) 520, 569
BslFI GGGAC 3 cut(s) 459, 803, 1240
BslI CCNNNNNNNGG 8 cut(s) 134, 442, 574, 633, 886, 962, 1264, 1474
BsmAI GTCTC 1 cut(s) 725
BsmFI GGGAC 3 cut(s) 459, 803, 1240
BsnI GGCC 3 cut(s) 11, 45, 324
BsoBI CYCGRG 1 cut(s) 449
Bsp1286I GDGCHC 1 cut(s) 1366
Bsp1407I TGTACA 1 cut(s) 827
Bsp143I GATC 3 cut(s) 146, 388, 952
Bsp19I CCATGG 3 cut(s) 133, 934, 1021
BspACI CCGC 5 cut(s) 4, 18, 267, 436, 497
BspANI GGCC 3 cut(s) 11, 45, 324
BspCNI CTCAG 4 cut(s) 103, 241, 721, 1329
BspDI ATCGAT 1 cut(s) 145
BspFNI CGCG 2 cut(s) 123, 156
BspLI GGNNCC 5 cut(s) 351, 447, 448, 774, 1365
BspPI GGATC 2 cut(s) 396, 947
BspTI CTTAAG 1 cut(s) 530
BsrDI GCAATG 3 cut(s) 168, 380, 1218
BsrGI TGTACA 1 cut(s) 827
BsrI ACTGG 1 cut(s) 46
BssECI CCNNGG 5 cut(s) 133, 520, 934, 961, 1021
BssMI GATC 3 cut(s) 146, 388, 952
BssNAI GTATAC 1 cut(s) 1563
BssNI GRCGYC 1 cut(s) 138
BssSI CACGAG 1 cut(s) 777
BssT1I CCWWGG 3 cut(s) 133, 934, 1021
Bst1107I GTATAC 1 cut(s) 1563
Bst2BI CACGAG 1 cut(s) 777
Bst2UI CCWGG 2 cut(s) 575, 963
Bst4CI ACNGT 3 cut(s) 1067, 1128, 1190
BstACI GRCGYC 1 cut(s) 138
BstAFI CTTAAG 1 cut(s) 530
BstAPI GCANNNNNTGC 1 cut(s) 506
BstAUI TGTACA 1 cut(s) 827
BstC8I GCNNGC 1 cut(s) 322
BstDEI CTNAG 4 cut(s) 111, 249, 729, 1337
BstDSI CCRYGG 3 cut(s) 133, 934, 1021
BstF5I GGATG 4 cut(s) 484, 930, 1048, 1542
BstFNI CGCG 2 cut(s) 123, 156
BstHHI GCGC 2 cut(s) 125, 158
BstKTI GATC 3 cut(s) 149, 391, 955
BstMAI GTCTC 1 cut(s) 725
BstMBI GATC 3 cut(s) 146, 388, 952
BstMWI GCNNNNNNNGC 4 cut(s) 17, 170, 179, 506
BstNI CCWGG 2 cut(s) 575, 963
BstSCI CCNGG 4 cut(s) 519, 567, 573, 961
BstSFI CTRYAG 2 cut(s) 1492, 1520
BstUI CGCG 2 cut(s) 123, 156
BstV1I GCAGC 6 cut(s) 347, 481, 592, 1123, 1320, 1512
BstV2I GAAGAC 1 cut(s) 1275
BstX2I RGATCY 1 cut(s) 952
BstYI RGATCY 1 cut(s) 952
BstZ17I GTATAC 1 cut(s) 1563
Bsu15I ATCGAT 1 cut(s) 145
BsuRI GGCC 3 cut(s) 11, 45, 324
BsuTUI ATCGAT 1 cut(s) 145
BtgI CCRYGG 3 cut(s) 133, 934, 1021
BtsCI GGATG 4 cut(s) 484, 930, 1048, 1542
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 2 cut(s) 39, 177
Cac8I GCNNGC 1 cut(s) 322
CaiI CAGNNNCTG 2 cut(s) 41, 1249
CfoI GCGC 2 cut(s) 125, 158
Cfr13I GGNCC 3 cut(s) 264, 446, 571
ClaI ATCGAT 1 cut(s) 145
CseI GACGC 1 cut(s) 127
Csp6I GTAC 5 cut(s) 428, 515, 565, 828, 1323
CspCI CAANNNNNGTGG 2 cut(s) 870, 905
CviAII CATG 8 cut(s) 56, 134, 206, 607, 935, 947, 1022, 1533
CviQI GTAC 5 cut(s) 428, 515, 565, 828, 1323
DdeI CTNAG 4 cut(s) 111, 249, 729, 1337
DpnI GATC 3 cut(s) 148, 390, 954
DpnII GATC 3 cut(s) 146, 388, 952
EaeI YGGCCR 1 cut(s) 322
EciI GGCGGA 1 cut(s) 256
Eco130I CCWWGG 3 cut(s) 133, 934, 1021
Eco24I GRGCYC 1 cut(s) 1366
Eco47I GGWCC 3 cut(s) 264, 446, 571
Eco57I CTGAAG 4 cut(s) 881, 1005, 1271, 1280
Eco88I CYCGRG 1 cut(s) 449
EcoO109I RGGNCCY 1 cut(s) 446
EcoRI GAATTC 4 cut(s) 276, 674, 724, 821
EcoRII CCWGG 2 cut(s) 573, 961
EcoT14I CCWWGG 3 cut(s) 133, 934, 1021
EcoT22I ATGCAT 1 cut(s) 1405
EcoT38I GRGCYC 1 cut(s) 1366
ErhI CCWWGG 3 cut(s) 133, 934, 1021
FaeI CATG 8 cut(s) 59, 137, 209, 610, 938, 950, 1025, 1536
FaqI GGGAC 3 cut(s) 459, 803, 1240
FatI CATG 8 cut(s) 55, 133, 205, 606, 934, 946, 1021, 1532
FblI GTMKAC 1 cut(s) 1562
Fnu4HI GCNGC 7 cut(s) 336, 495, 498, 581, 1112, 1334, 1526
FokI GGATG 4 cut(s) 471, 917, 1055, 1549
FriOI GRGCYC 1 cut(s) 1366
Fsp4HI GCNGC 7 cut(s) 336, 495, 498, 581, 1112, 1334, 1526
FspBI CTAG 4 cut(s) 720, 1016, 1149, 1385
GlaI GCGC 2 cut(s) 124, 157
GluI GCNGC 7 cut(s) 336, 495, 498, 581, 1112, 1334, 1526
GsuI CTGGAG 1 cut(s) 596
HaeIII GGCC 3 cut(s) 11, 45, 324
HapII CCGG 2 cut(s) 520, 569
HgaI GACGC 1 cut(s) 127
HhaI GCGC 2 cut(s) 125, 158
Hin1I GRCGYC 1 cut(s) 138
Hin1II CATG 8 cut(s) 59, 137, 209, 610, 938, 950, 1025, 1536
Hin6I GCGC 2 cut(s) 123, 156
HinP1I GCGC 2 cut(s) 123, 156
HincII GTYRAC 2 cut(s) 187, 220
HindII GTYRAC 2 cut(s) 187, 220
HindIII AAGCTT 1 cut(s) 1550
HpaII CCGG 2 cut(s) 520, 569
HphI GGTGA 2 cut(s) 40, 1133
Hpy166II GTNNAC 6 cut(s) 187, 198, 220, 517, 1124, 1563
Hpy8I GTNNAC 6 cut(s) 187, 198, 220, 517, 1124, 1563
HpyCH4III ACNGT 3 cut(s) 1067, 1128, 1190
HpyCH4IV ACGT 1 cut(s) 1231
HpyCH4V TGCA 8 cut(s) 335, 385, 562, 946, 1111, 1139, 1403, 1484
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 170, 179, 506
HpyF3I CTNAG 4 cut(s) 111, 249, 729, 1337
HpySE526I ACGT 1 cut(s) 1231
Hsp92I GRCGYC 1 cut(s) 138
Hsp92II CATG 8 cut(s) 59, 137, 209, 610, 938, 950, 1025, 1536
HspAI GCGC 2 cut(s) 123, 156
KflI GGGWCCC 1 cut(s) 446
Kzo9I GATC 3 cut(s) 146, 388, 952
LmnI GCTCC 3 cut(s) 577, 1246, 1369
Lsp1109I GCAGC 6 cut(s) 347, 481, 592, 1123, 1320, 1512
LweI GCATC 1 cut(s) 509
MaeI CTAG 4 cut(s) 720, 1016, 1149, 1385
MaeII ACGT 1 cut(s) 1231
MaeIII GTNAC 4 cut(s) 471, 965, 1380, 1487
MalI GATC 3 cut(s) 148, 390, 954
MboI GATC 3 cut(s) 146, 388, 952
MboII GAAGA 9 cut(s) 75, 141, 1082, 1188, 1235, 1269, 1273, 1280, 1547
MflI RGATCY 1 cut(s) 952
MhlI GDGCHC 1 cut(s) 1366
MlsI TGGCCA 1 cut(s) 324
MluNI TGGCCA 1 cut(s) 324
MlyI GAGTC 7 cut(s) 204, 215, 364, 692, 793, 1091, 1383
MmeI TCCRAC 2 cut(s) 885, 1038
Mox20I TGGCCA 1 cut(s) 324
Mph1103I ATGCAT 1 cut(s) 1405
MscI TGGCCA 1 cut(s) 324
MseI TTAA 7 cut(s) 29, 420, 531, 555, 794, 1085, 1499
Msp20I TGGCCA 1 cut(s) 324
MspA1I CMGCKG 1 cut(s) 1525
MspCI CTTAAG 1 cut(s) 530
MspI CCGG 2 cut(s) 520, 569
MspR9I CCNGG 4 cut(s) 521, 569, 575, 963
MvaI CCWGG 2 cut(s) 575, 963
MvnI CGCG 2 cut(s) 123, 156
MwoI GCNNNNNNNGC 4 cut(s) 17, 170, 179, 506
NciI CCSGG 2 cut(s) 521, 569
NcoI CCATGG 3 cut(s) 133, 934, 1021
NdeII GATC 3 cut(s) 146, 388, 952
NlaIII CATG 8 cut(s) 59, 137, 209, 610, 938, 950, 1025, 1536
NlaIV GGNNCC 5 cut(s) 351, 447, 448, 774, 1365
NmuCI GTSAC 1 cut(s) 471
NsiI ATGCAT 1 cut(s) 1405
PfeI GAWTC 4 cut(s) 92, 1289, 1429, 1436
PflMI CCANNNNNTGG 2 cut(s) 134, 962
PkrI GCNGC 7 cut(s) 337, 496, 499, 582, 1113, 1335, 1527
PleI GAGTC 7 cut(s) 204, 215, 364, 691, 793, 1091, 1382
PpsI GAGTC 7 cut(s) 204, 215, 364, 691, 793, 1091, 1382
PpuMI RGGWCCY 1 cut(s) 446
PshBI ATTAAT 1 cut(s) 1085
Psp5II RGGWCCY 1 cut(s) 446
Psp6I CCWGG 2 cut(s) 573, 961
PspGI CCWGG 2 cut(s) 573, 961
PspN4I GGNNCC 5 cut(s) 351, 447, 448, 774, 1365
PspPI GGNCC 3 cut(s) 264, 446, 571
PspPPI RGGWCCY 1 cut(s) 446
PstNI CAGNNNCTG 2 cut(s) 41, 1249
PsuI RGATCY 1 cut(s) 952
PvuII CAGCTG 1 cut(s) 1525
RsaI GTAC 5 cut(s) 429, 516, 566, 829, 1324
RsaNI GTAC 5 cut(s) 428, 515, 565, 828, 1323
SaqAI TTAA 7 cut(s) 29, 420, 531, 555, 794, 1085, 1499
SatI GCNGC 7 cut(s) 336, 495, 498, 581, 1112, 1334, 1526
Sau3AI GATC 3 cut(s) 146, 388, 952
Sau96I GGNCC 3 cut(s) 264, 446, 571
SchI GAGTC 7 cut(s) 204, 215, 364, 692, 793, 1091, 1383
ScrFI CCNGG 4 cut(s) 521, 569, 575, 963
SduI GDGCHC 1 cut(s) 1366
SfaNI GCATC 1 cut(s) 509
SfcI CTRYAG 2 cut(s) 1492, 1520
SinI GGWCC 3 cut(s) 264, 446, 571
SmlI CTYRAG 3 cut(s) 271, 510, 530
SmoI CTYRAG 3 cut(s) 271, 510, 530
SsiI CCGC 5 cut(s) 4, 18, 267, 436, 497
SspI AATATT 1 cut(s) 1317
SspMI CTAG 4 cut(s) 720, 1016, 1149, 1385
StyD4I CCNGG 4 cut(s) 519, 567, 573, 961
StyI CCWWGG 3 cut(s) 133, 934, 1021
TaaI ACNGT 3 cut(s) 1067, 1128, 1190
TaiI ACGT 1 cut(s) 1234
TaqI TCGA 3 cut(s) 145, 477, 696
TatI WGTACW 2 cut(s) 514, 827
TauI GCSGC 1 cut(s) 500
TfiI GAWTC 4 cut(s) 92, 1289, 1429, 1436
Tru1I TTAA 7 cut(s) 29, 420, 531, 555, 794, 1085, 1499
Tru9I TTAA 7 cut(s) 29, 420, 531, 555, 794, 1085, 1499
TscAI CASTG 2 cut(s) 46, 184
TseFI GTSAC 1 cut(s) 471
TseI GCWGC 6 cut(s) 335, 494, 580, 1111, 1333, 1525
Tsp45I GTSAC 1 cut(s) 471
TspDTI ATGAA 9 cut(s) 245, 495, 602, 899, 919, 1059, 1269, 1521, 1587
TspRI CASTG 2 cut(s) 46, 184
Van91I CCANNNNNTGG 2 cut(s) 134, 962
Vha464I CTTAAG 1 cut(s) 530
VpaK11BI GGWCC 3 cut(s) 264, 446, 571
VspI ATTAAT 1 cut(s) 1085
XapI RAATTY 4 cut(s) 276, 674, 724, 821
XbaI TCTAGA 2 cut(s) 1015, 1148
XmiI GTMKAC 1 cut(s) 1562
XspI CTAG 4 cut(s) 720, 1016, 1149, 1385
Zsp2I ATGCAT 1 cut(s) 1405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.