Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008086

Physical Location & Seq

Genomic Coordinates Forward (+)

26416872 .. 26419788

Gene Structure 2917 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G70150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1125 bp

ATGGAGTGTGCCGCGCGTGGTTTTGCGACGCGGTGTGTTGGTCCACCGACGCGGAGGTGTGGTCAGTGTGGTGCTGTAGCTTATTGCTCCGTCTCTCATCAGATTTCGCATTGGAGCTATCACAAGGAAGAATGTGAGAGATTAGAAGAGCAAATGCGTCGTGTTGATCTTTTAAATGATTTTCCATTTACATTTACAGAAGAAGCTACAATTCAGGTTAGTCAAAAACATGAGACTAGGTGCTCGTTCTTCATCAAGAGGGGATTACATCGTGTTGGAATGTGGATGTATGAGTGTAACTGTGGAGCTTTGGCTTTTGATAGTTTTAATATTGAAGGGTGGCATTTGCCGAGCTCTTCTTGTCCATGTCGTGGGCCTTTATCTCCAATAACTAAACAGCTATGTACTTGGAAGGATTATTTCGAGTGGAGAAAGTTACCTCTAGATTCACCTGTAGCTCTACTTCTCCACTGGCCACTTACGATATATCATGCAGTTCAAGCCATTGGGATGGGAAATTTGACTCCCCAAATAAGTGATGAACTTCGTATACATTATCTTGGGCCTCAGAAGGAACTTGGGCAACTTGGTGTTTTTGCTGAGCTGCAAGCGCTCTTCCCTGGTCTGCGCATTTATGTAGATTTGATTGGACCTGACGTTCCACAACATATGGATGGAGAAATGATCTCCCTTTGCAGATATTCCCCTTGCATGGGAAAAGAATGTGAATGTAAAAATTCAAGCAAAATTCTCAATTCCGGGAGCAAACCTGCTTTGGTTTCGGCTGTGTCATTACAGCTCCGTAGAGGGTTTTACCATGATCGTTACAATGACATAACAAAGGATTCATTTCCTCCACACATAGTGATTGCTCCAAACGCAGGCATCGCTGCATATCCAAGCTGGTTGCCAACTATTGAACTGATAAAGGAGATACAAGTCCCAGCAGTATTCTCTGATTACTGTGAAGAAGCTTGTCATCTGGCTGCTTGTTGCATTAAAACCATCACAGGACAACCTCTATCATCACCTATTGAGTTGAATCCATTTAGACAGCCAATGGCAGTAGAGGAGAGTACTCTGTTTATCCCTTGCTACTCAAACTGTTTCATCTTCGCAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007276 GO:0007281 GO:0007283 GO:0007286 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019899 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0042826 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044703 GO:0045892 GO:0045934 GO:0048232 GO:0048468 GO:0048515 GO:0048519 GO:0048523 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0060255 GO:0065007 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-MYND

Protein Analysis

374

Amino Acids

42.2

Weight (kDa)

6.23

Isoelectric Point (pI)

63.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	12 - 45	7.2e-09	MYND finger
MSS51_C	PF20179	159 - 355	8.8e-32	MSS51 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70150
fragaria_vesca	FvH4_4g35220 FvH4_4g35220 FvH4_4g35220 FvH4_4g35220 FvH4_4g35220 FvH4_4g35220
malus_domestica	MD16G1084700.v1.1
prunus_persica	Prupe.1G261400_v2.0.a1 Prupe.1G261400_v2.0.a1 Prupe.1G261400_v2.0.a1
pyrus_communis	pycom13g07380
rosa_chinensis	RchiOBHm_Chr4g0444821
rosa_laevigata	RLG00000005799
rosa_multiflora	Rmu_sc0007130.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385310
rosa_rugosa	Rorug04G0355300
rosa_samantha	Rh4AG416700 Rh4BG428500 Rh4BG428600 Rh4CG443200 Rh4DG424200 Rh4DG424300
rosa_wichuraiana	Rw4G035720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	629
Acc36I	ACCTGC	1 cut(s)	778
AccB7I	CCANNNNNTGG	1 cut(s)	371
AccI	GTMKAC	1 cut(s)	550
AccII	CGCG	4 cut(s)	14, 16, 31, 52
AciI	CCGC	3 cut(s)	12, 31, 52
AcoI	YGGCCR	1 cut(s)	473
AcsI	RAATTY	3 cut(s)	517, 736, 747
AdeI	CACNNNGTG	1 cut(s)	865
AfaI	GTAC	2 cut(s)	406, 1078
AfeI	AGCGCT	1 cut(s)	612
AfiI	CCNNNNNNNGG	4 cut(s)	371, 712, 713, 881
AgsI	TTSAA	5 cut(s)	335, 500, 741, 920, 1042
AjnI	CCWGG	1 cut(s)	619
AloI	GAACNNNNNNTCC	2 cut(s)	642, 674
Alw21I	GWGCWC	2 cut(s)	245, 356
Alw26I	GTCTC	2 cut(s)	97, 227
Aor51HI	AGCGCT	1 cut(s)	612
AoxI	GGCC	3 cut(s)	374, 473, 563
ApeKI	GCWGC	3 cut(s)	604, 890, 986
ApoI	RAATTY	3 cut(s)	517, 736, 747
AspLEI	GCGC	3 cut(s)	16, 613, 630
AspS9I	GGNCC	4 cut(s)	41, 374, 563, 650
AsuC2I	CCSGG	1 cut(s)	760
AsuHPI	GGTGA	2 cut(s)	441, 1020
AvaII	GGWCC	2 cut(s)	41, 650
BalI	TGGCCA	1 cut(s)	475
BanII	GRGCYC	1 cut(s)	356
BarI	GAAGNNNNNNTAC	2 cut(s)	447, 479
Bbv12I	GWGCWC	2 cut(s)	245, 356
BbvI	GCAGC	3 cut(s)	591, 877, 973
BccI	CCATC	3 cut(s)	505, 668, 1013
BcgI	CGANNNNNNTGC	2 cut(s)	140, 174
BciT130I	CCWGG	1 cut(s)	621
BcnI	CCSGG	1 cut(s)	760
BcoDI	GTCTC	2 cut(s)	97, 227
BfaI	CTAG	2 cut(s)	237, 443
BfmI	CTRYAG	2 cut(s)	75, 453
BfoI	RGCGCY	1 cut(s)	614
BfuAI	ACCTGC	1 cut(s)	778
BisI	GCNGC	4 cut(s)	12, 605, 891, 987
BlpI	GCTNAGC	1 cut(s)	600
BlsI	GCNGC	4 cut(s)	13, 606, 892, 988
BmcAI	AGTACT	1 cut(s)	1078
Bme1390I	CCNGG	2 cut(s)	621, 760
Bme18I	GGWCC	2 cut(s)	41, 650
BmgT120I	GGNCC	4 cut(s)	41, 374, 563, 650
BmrFI	CCNGG	2 cut(s)	621, 760
BmsI	GCATC	1 cut(s)	894
Bpu1102I	GCTNAGC	1 cut(s)	600
BpuMI	CCSGG	1 cut(s)	760
BsaJI	CCNNGG	1 cut(s)	619
BsaXI	ACNNNNNCTCC	2 cut(s)	46, 76
Bsc4I	CCNNNNNNNGG	4 cut(s)	371, 712, 713, 881
Bse1I	ACTGG	1 cut(s)	476
Bse3DI	GCAATG	1 cut(s)	1125
BseBI	CCWGG	1 cut(s)	621
BseDI	CCNNGG	1 cut(s)	619
BseGI	GGATG	3 cut(s)	291, 516, 679
BseLI	CCNNNNNNNGG	4 cut(s)	371, 712, 713, 881
BseMI	GCAATG	1 cut(s)	1125
BseMII	CTCAG	2 cut(s)	581, 591
BseNI	ACTGG	1 cut(s)	476
BseRI	GAGGAG	1 cut(s)	1085
BseXI	GCAGC	3 cut(s)	591, 877, 973
BseYI	CCCAGC	1 cut(s)	943
Bsh1236I	CGCG	4 cut(s)	14, 16, 31, 52
BshFI	GGCC	3 cut(s)	376, 475, 565
BsiHKAI	GWGCWC	2 cut(s)	245, 356
BsiSI	CCGG	1 cut(s)	759
BslFI	GGGAC	1 cut(s)	926
BslI	CCNNNNNNNGG	4 cut(s)	371, 712, 713, 881
BsmAI	GTCTC	2 cut(s)	97, 227
BsmBI	CGTCTC	1 cut(s)	97
BsmFI	GGGAC	1 cut(s)	926
BsnI	GGCC	3 cut(s)	376, 475, 565
Bsp1286I	GDGCHC	2 cut(s)	245, 356
Bsp143I	GATC	3 cut(s)	166, 684, 820
Bsp1720I	GCTNAGC	1 cut(s)	600
BspACI	CCGC	3 cut(s)	12, 31, 52
BspANI	GGCC	3 cut(s)	376, 475, 565
BspCNI	CTCAG	2 cut(s)	580, 592
BspFNI	CGCG	4 cut(s)	14, 16, 31, 52
BspMI	ACCTGC	1 cut(s)	778
BspQI	GCTCTTC	3 cut(s)	141, 361, 620
BsrDI	GCAATG	1 cut(s)	1125
BsrI	ACTGG	1 cut(s)	476
BssECI	CCNNGG	1 cut(s)	619
BssMI	GATC	3 cut(s)	166, 684, 820
BssNAI	GTATAC	1 cut(s)	551
Bst1107I	GTATAC	1 cut(s)	551
Bst2UI	CCWGG	1 cut(s)	621
Bst4CI	ACNGT	3 cut(s)	302, 965, 1106
Bst6I	CTCTTC	3 cut(s)	141, 361, 620
BstC8I	GCNNGC	2 cut(s)	609, 883
BstDEI	CTNAG	2 cut(s)	567, 600
BstF5I	GGATG	3 cut(s)	291, 516, 679
BstFNI	CGCG	4 cut(s)	14, 16, 31, 52
BstH2I	RGCGCY	1 cut(s)	614
BstHHI	GCGC	3 cut(s)	16, 613, 630
BstKTI	GATC	3 cut(s)	169, 687, 823
BstMAI	GTCTC	2 cut(s)	97, 227
BstMBI	GATC	3 cut(s)	166, 684, 820
BstMWI	GCNNNNNNNGC	4 cut(s)	500, 610, 878, 887
BstNI	CCWGG	1 cut(s)	621
BstSCI	CCNGG	2 cut(s)	619, 758
BstSFI	CTRYAG	2 cut(s)	75, 453
BstUI	CGCG	4 cut(s)	14, 16, 31, 52
BstV1I	GCAGC	3 cut(s)	591, 877, 973
BstXI	CCANNNNNNTGG	1 cut(s)	511
BstZ17I	GTATAC	1 cut(s)	551
BsuRI	GGCC	3 cut(s)	376, 475, 565
BtgZI	GCGATG	1 cut(s)	871
BtsCI	GGATG	3 cut(s)	291, 516, 679
BtsIMutI	CAGTG	2 cut(s)	71, 469
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	2 cut(s)	609, 883
CfoI	GCGC	3 cut(s)	16, 613, 630
Cfr13I	GGNCC	4 cut(s)	41, 374, 563, 650
CseI	GACGC	3 cut(s)	37, 58, 146
Csp6I	GTAC	2 cut(s)	405, 1077
CviAII	CATG	5 cut(s)	230, 366, 491, 712, 818
CviQI	GTAC	2 cut(s)	405, 1077
DdeI	CTNAG	2 cut(s)	567, 600
DpnI	GATC	3 cut(s)	168, 686, 822
DpnII	GATC	3 cut(s)	166, 684, 820
DraI	TTTAAA	1 cut(s)	174
DraIII	CACNNNGTG	1 cut(s)	865
EaeI	YGGCCR	1 cut(s)	473
Eam1104I	CTCTTC	3 cut(s)	141, 361, 620
EarI	CTCTTC	3 cut(s)	141, 361, 620
Ecl136II	GAGCTC	1 cut(s)	354
Eco24I	GRGCYC	1 cut(s)	356
Eco47I	GGWCC	2 cut(s)	41, 650
Eco47III	AGCGCT	1 cut(s)	612
Eco53kI	GAGCTC	1 cut(s)	354
EcoICRI	GAGCTC	1 cut(s)	354
EcoRII	CCWGG	1 cut(s)	619
EcoT38I	GRGCYC	1 cut(s)	356
Esp3I	CGTCTC	1 cut(s)	97
FaeI	CATG	5 cut(s)	233, 369, 494, 715, 821
FaqI	GGGAC	1 cut(s)	926
FatI	CATG	5 cut(s)	229, 365, 490, 711, 817
FauNDI	CATATG	1 cut(s)	669
FblI	GTMKAC	1 cut(s)	550
Fnu4HI	GCNGC	4 cut(s)	12, 605, 891, 987
FokI	GGATG	3 cut(s)	298, 523, 686
FriOI	GRGCYC	1 cut(s)	356
Fsp4HI	GCNGC	4 cut(s)	12, 605, 891, 987
FspBI	CTAG	2 cut(s)	237, 443
FspI	TGCGCA	1 cut(s)	629
GlaI	GCGC	3 cut(s)	15, 612, 629
GluI	GCNGC	4 cut(s)	12, 605, 891, 987
GsaI	CCCAGC	1 cut(s)	947
HaeII	RGCGCY	1 cut(s)	614
HaeIII	GGCC	3 cut(s)	376, 475, 565
HapII	CCGG	1 cut(s)	759
HgaI	GACGC	3 cut(s)	37, 58, 146
HhaI	GCGC	3 cut(s)	16, 613, 630
Hin1II	CATG	5 cut(s)	233, 369, 494, 715, 821
Hin6I	GCGC	3 cut(s)	14, 611, 628
HinP1I	GCGC	3 cut(s)	14, 611, 628
HindIII	AAGCTT	1 cut(s)	972
HinfI	GANTC	4 cut(s)	446, 523, 845, 1042
HpaII	CCGG	1 cut(s)	759
HphI	GGTGA	2 cut(s)	441, 1020
Hpy166II	GTNNAC	2 cut(s)	44, 551
Hpy188I	TCNGA	3 cut(s)	102, 570, 958
Hpy188III	TCNNGA	2 cut(s)	256, 443
Hpy8I	GTNNAC	2 cut(s)	44, 551
Hpy99I	CGWCG	3 cut(s)	31, 52, 162
HpyAV	CCTTC	3 cut(s)	329, 406, 565
HpyCH4III	ACNGT	3 cut(s)	302, 965, 1106
HpyCH4IV	ACGT	1 cut(s)	657
HpyCH4V	TGCA	6 cut(s)	494, 607, 696, 711, 893, 996
HpyF10VI	GCNNNNNNNGC	4 cut(s)	500, 610, 878, 887
HpyF3I	CTNAG	2 cut(s)	567, 600
HpySE526I	ACGT	1 cut(s)	657
Hsp92II	CATG	5 cut(s)	233, 369, 494, 715, 821
HspAI	GCGC	3 cut(s)	14, 611, 628
Kzo9I	GATC	3 cut(s)	166, 684, 820
LguI	GCTCTTC	3 cut(s)	141, 361, 620
LmnI	GCTCC	6 cut(s)	92, 114, 305, 762, 804, 877
Lsp1109I	GCAGC	3 cut(s)	591, 877, 973
LweI	GCATC	1 cut(s)	894
MaeI	CTAG	2 cut(s)	237, 443
MaeII	ACGT	1 cut(s)	657
MaeIII	GTNAC	3 cut(s)	296, 435, 824
MalI	GATC	3 cut(s)	168, 686, 822
MboI	GATC	3 cut(s)	166, 684, 820
MboII	GAAGA	8 cut(s)	140, 158, 212, 241, 348, 607, 980, 1105
MhlI	GDGCHC	2 cut(s)	245, 356
MlsI	TGGCCA	1 cut(s)	475
MluCI	AATT	5 cut(s)	210, 517, 736, 747, 754
MluNI	TGGCCA	1 cut(s)	475
MlyI	GAGTC	1 cut(s)	517
MmeI	TCCRAC	1 cut(s)	256
MnlI	CCTC	8 cut(s)	48, 252, 450, 576, 800, 864, 1029, 1063
Mox20I	TGGCCA	1 cut(s)	475
MscI	TGGCCA	1 cut(s)	475
MseI	TTAA	3 cut(s)	173, 327, 999
MslI	CAYNNNNRTG	2 cut(s)	509, 672
Msp20I	TGGCCA	1 cut(s)	475
MspI	CCGG	1 cut(s)	759
MspR9I	CCNGG	2 cut(s)	621, 760
MvaI	CCWGG	1 cut(s)	621
MvnI	CGCG	4 cut(s)	14, 16, 31, 52
MwoI	GCNNNNNNNGC	4 cut(s)	500, 610, 878, 887
NciI	CCSGG	1 cut(s)	760
NdeI	CATATG	1 cut(s)	669
NdeII	GATC	3 cut(s)	166, 684, 820
NlaIII	CATG	5 cut(s)	233, 369, 494, 715, 821
NmeAIII	GCCGAG	1 cut(s)	375
NsbI	TGCGCA	1 cut(s)	629
PciSI	GCTCTTC	3 cut(s)	141, 361, 620
PfeI	GAWTC	3 cut(s)	446, 845, 1042
PflMI	CCANNNNNTGG	1 cut(s)	371
PfoI	TCCNGGA	1 cut(s)	758
PkrI	GCNGC	4 cut(s)	13, 606, 892, 988
PleI	GAGTC	1 cut(s)	517
PpsI	GAGTC	1 cut(s)	517
Psp124BI	GAGCTC	1 cut(s)	356
Psp6I	CCWGG	1 cut(s)	619
PspFI	CCCAGC	1 cut(s)	943
PspGI	CCWGG	1 cut(s)	619
PspPI	GGNCC	4 cut(s)	41, 374, 563, 650
PsrI	GAACNNNNNNTAC	2 cut(s)	534, 566
RsaI	GTAC	2 cut(s)	406, 1078
RsaNI	GTAC	2 cut(s)	405, 1077
RseI	CAYNNNNRTG	2 cut(s)	509, 672
SacI	GAGCTC	1 cut(s)	356
SapI	GCTCTTC	3 cut(s)	141, 361, 620
SaqAI	TTAA	3 cut(s)	173, 327, 999
SatI	GCNGC	4 cut(s)	12, 605, 891, 987
Sau3AI	GATC	3 cut(s)	166, 684, 820
Sau96I	GGNCC	4 cut(s)	41, 374, 563, 650
ScaI	AGTACT	1 cut(s)	1078
SchI	GAGTC	1 cut(s)	517
ScrFI	CCNGG	2 cut(s)	621, 760
SduI	GDGCHC	2 cut(s)	245, 356
SfaNI	GCATC	1 cut(s)	894
SfcI	CTRYAG	2 cut(s)	75, 453
SinI	GGWCC	2 cut(s)	41, 650
SmiMI	CAYNNNNRTG	2 cut(s)	509, 672
Sse9I	AATT	5 cut(s)	210, 517, 736, 747, 754
SsiI	CCGC	3 cut(s)	12, 31, 52
SspI	AATATT	1 cut(s)	331
SspMI	CTAG	2 cut(s)	237, 443
SstI	GAGCTC	1 cut(s)	356
StyD4I	CCNGG	2 cut(s)	619, 758
TaaI	ACNGT	3 cut(s)	302, 965, 1106
TaiI	ACGT	1 cut(s)	660
TaqI	TCGA	1 cut(s)	423
TasI	AATT	5 cut(s)	210, 517, 736, 747, 754
TatI	WGTACW	2 cut(s)	404, 1076
TauI	GCSGC	1 cut(s)	14
TfiI	GAWTC	3 cut(s)	446, 845, 1042
Tru1I	TTAA	3 cut(s)	173, 327, 999
Tru9I	TTAA	3 cut(s)	173, 327, 999
TscAI	CASTG	2 cut(s)	71, 476
TseI	GCWGC	3 cut(s)	604, 890, 986
TspDTI	ATGAA	4 cut(s)	241, 555, 837, 1099
TspGWI	ACGGA	2 cut(s)	79, 791
TspRI	CASTG	2 cut(s)	71, 476
Van91I	CCANNNNNTGG	1 cut(s)	371
VpaK11BI	GGWCC	2 cut(s)	41, 650
XapI	RAATTY	3 cut(s)	517, 736, 747
XbaI	TCTAGA	1 cut(s)	442
XmiI	GTMKAC	1 cut(s)	550
XspI	CTAG	2 cut(s)	237, 443
ZrmI	AGTACT	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.