AT1G72000

neutral invertase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
27103277 .. 27105663
2387 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G72000.1

Sequence Viewer

Length: 1500 bp
ATGTCTTTAAGCCTTTACGACAGTGCACATTCACTAGACGGTAAGTCTGGTTGGGATACTCCGGTTTTCTCCATGAAAGACTCAATGGATCGTAACCCGATGGTCACAGAAGCTTGGGAGGCTCTCTGCCAGTCTCAGGTCTACTTCCGGGGAAAACCGGTAGGAACCATCGCCGCCTACGACCATGCTTCAGAAGAGGTCTTGAACTATGATCAGGTGTTCGTACGTGATTTTGTACCGAGTGCTCTAGCATTTCTGATGAATGGAGAGCCTGAAATTGTGAAGAACTTTCTCCTGAAGACACTTCATATTCAGGGACAAGACAAAATGATCGACAAGTTCAAGCTTGGTGACGGCGCAATGCCAGCAAGCTTTAAAGTTCTACATAATCCTATCAAGAAGACGGATACGATTATCGCTGACTTTGGAGAAAGCGCCATCGGGAGAGTGGCTCCAGTCGACTCTGGCTTCTGGTGGATCATTCTCCTCCGAGCTTACACTAAGTCTACAGGAGATCATTCTCTAGCAGAGAGACCAGAGTGCCAAAAGGGAATGAGACTCATACTTTCTTTGTGTCTCTCTGAGGGTTTTGATACTTTTCCGACTTTGCTTTGCGCAGATGGTTGCTCGATGGTCGATCGTAGAATGGGCATTTACGGCTATCCGATTGAGATCCAAGCCCTCTTTTTCATGGCTCTTCGATCCGCACTCTCAATGCTGAAACATGATTCTGAGGGTAAAGAGTTCATGGAAAAGATAGTGAAGCGGCTGCACGCACTAAGCTTCCATATGAGAAGCTACTTTTGGCTCGATTTCCAGCAGCTCAATGACATTTACCGTTACAAGACGGAGGAGTACTCTCACACCGCGGTAAACAAGTTCAACGTAATCCCTGACTCCATCCCTGATTGGATCTTTGACTTCATGCCTCTCCGAGGTGGCTACTTCGTTGGAAATGTCAGTCCCGCCCGCATGGACTTCAGGTGGTTTGCGTTAGGAAATTGTATCGCAATTCTTTCCTCATTGGCCACACCAGAGCAGTCCATGGCGATCATGGACCTGATTGAGGCCCGGTGGGAAGAACTTGTGGGAGAGATGCCGTTGAAGATATGTTATCCGGCGATGGAGAGTCACGAGTGGGGGATTGTCACTGGCTGTGACCCTAAGAACACAAGGTGGAGCTACCACAACGGAGGCTCTTGGCCAGTGCTTCTATGGTTACTAACGGCGGCAAGCATAAAGACTGGACGGCCACAAATAGCACGACGGGCTATAGAGTTGGCGGAGGCACGACTGTTGAAGGATGGATGGCCGGAGTACTACGACGGAAAGTCTGGAAGATTCATCGGAAAACAGGCTAGGAAATCTCAGACATGGTCAATCGCTGGCTATTTGGTCGCCAAGATGATGATGGATGATCCAACGCATGTGGGAATGATCTCAATGGAAGAAGAGAAACATATGAAACCTCCTCTTAGAAGATCTTCTTCTTGGACTTAA

Protein Analysis

499

Amino Acids

56.79

Weight (kDa)

6.25

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_100 PF12899 38 - 474 7e-216 Alkaline and neutral invertase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 616
AccI GTMKAC 3 cut(s) 141, 459, 506
AccII CGCG 1 cut(s) 869
AciI CCGC 9 cut(s) 174, 705, 766, 867, 869, 966, 970, 1229, 1283
AclWI GGATC 6 cut(s) 96, 485, 667, 696, 920, 1412
AcoI YGGCCR 4 cut(s) 1026, 1202, 1250, 1310
AcuI CTGAAG 3 cut(s) 174, 317, 964
AdeI CACNNNGTG 1 cut(s) 1176
AfaI GTAC 4 cut(s) 225, 237, 857, 1319
AfiI CCNNNNNNNGG 3 cut(s) 136, 935, 1066
AgeI ACCGGT 1 cut(s) 157
AgsI TTSAA 5 cut(s) 205, 343, 883, 1105, 1300
AhdI GACNNNNNGTC 2 cut(s) 43, 1330
AjuI GAANNNNNNNTTGG 2 cut(s) 787, 819
AluBI AGCT 8 cut(s) 113, 346, 372, 494, 783, 798, 823, 1182
AluI AGCT 8 cut(s) 113, 346, 372, 494, 783, 798, 823, 1182
Alw21I GWGCWC 2 cut(s) 28, 247
Alw26I GTCTC 4 cut(s) 138, 526, 550, 581
Alw44I GTGCAC 1 cut(s) 24
AlwI GGATC 6 cut(s) 96, 485, 667, 696, 920, 1412
AoxI GGCC 5 cut(s) 1026, 1068, 1202, 1250, 1310
ApaLI GTGCAC 1 cut(s) 24
ApeKI GCWGC 2 cut(s) 769, 820
AsiGI ACCGGT 1 cut(s) 157
Asp700I GAANNNNTTC 1 cut(s) 1483
AspLEI GCGC 3 cut(s) 359, 437, 617
AspS9I GGNCC 2 cut(s) 1057, 1069
AsuC2I CCSGG 2 cut(s) 149, 1072
AsuHPI GGTGA 1 cut(s) 362
AvaII GGWCC 1 cut(s) 1057
BaeGI GKGCMC 1 cut(s) 28
BaeI ACNNNNGTAYC 2 cut(s) 48, 81
BalI TGGCCA 2 cut(s) 1028, 1204
BauI CACGAG 1 cut(s) 1133
BbsI GAAGAC 2 cut(s) 305, 407
Bbv12I GWGCWC 2 cut(s) 28, 247
BbvI GCAGC 2 cut(s) 756, 832
BceAI ACGGC 5 cut(s) 370, 673, 1084, 1242, 1265
BciVI GTATCC 2 cut(s) 49, 400
BclI TGATCA 1 cut(s) 211
BcnI CCSGG 2 cut(s) 149, 1072
BcoDI GTCTC 4 cut(s) 138, 526, 550, 581
BfaI CTAG 4 cut(s) 35, 248, 524, 1359
BfmI CTRYAG 2 cut(s) 507, 1272
BfoI RGCGCY 1 cut(s) 438
BfuI GTATCC 2 cut(s) 49, 400
BglII AGATCT 1 cut(s) 1481
BisI GCNGC 5 cut(s) 174, 767, 770, 821, 1230
BlsI GCNGC 5 cut(s) 175, 768, 771, 822, 1231
BmcAI AGTACT 2 cut(s) 857, 1319
Bme1390I CCNGG 2 cut(s) 149, 1072
Bme18I GGWCC 1 cut(s) 1057
BmeRI GACNNNNNGTC 2 cut(s) 43, 1330
BmgT120I GGNCC 2 cut(s) 1057, 1069
BmiI GGNNCC 2 cut(s) 166, 453
BmrFI CCNGG 2 cut(s) 149, 1072
BmsI GCATC 1 cut(s) 1086
BpiI GAAGAC 2 cut(s) 305, 407
BplI GAGNNNNNCTC 4 cut(s) 436, 468, 842, 874
BpmI CTGGAG 1 cut(s) 438
BpuMI CCSGG 2 cut(s) 149, 1072
BsaAI YACGTR 1 cut(s) 227
BsaBI GATNNNNATC 1 cut(s) 671
BsaI GGTCTC 1 cut(s) 526
BsaJI CCNNGG 4 cut(s) 148, 867, 934, 1044
BsaWI WCCGGW 2 cut(s) 61, 157
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 935, 1066
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 5 cut(s) 130, 455, 1156, 1205, 1249
Bse3DI GCAATG 1 cut(s) 366
Bse8I GATNNNNATC 1 cut(s) 671
BseDI CCNNGG 4 cut(s) 148, 867, 934, 1044
BseGI GGATG 4 cut(s) 900, 1309, 1313, 1420
BseJI GATNNNNATC 1 cut(s) 671
BseLI CCNNNNNNNGG 3 cut(s) 136, 935, 1066
BseMI GCAATG 1 cut(s) 366
BseMII CTCAG 4 cut(s) 149, 573, 723, 1382
BseNI ACTGG 5 cut(s) 130, 455, 1156, 1205, 1249
BseRI GAGGAG 3 cut(s) 476, 866, 1461
BseSI GKGCMC 1 cut(s) 28
BseXI GCAGC 2 cut(s) 756, 832
BsgI GTGCAG 1 cut(s) 755
Bsh1236I CGCG 1 cut(s) 869
Bsh1285I CGRYCG 1 cut(s) 640
BshFI GGCC 5 cut(s) 1028, 1070, 1204, 1252, 1312
BshTI ACCGGT 1 cut(s) 157
BsiEI CGRYCG 1 cut(s) 640
BsiHKAI GWGCWC 2 cut(s) 28, 247
BsiSI CCGG 6 cut(s) 62, 148, 158, 1072, 1118, 1313
BsiWI CGTACG 1 cut(s) 223
BslFI GGGAC 2 cut(s) 330, 948
BslI CCNNNNNNNGG 3 cut(s) 136, 935, 1066
BsmAI GTCTC 4 cut(s) 138, 526, 550, 581
BsmFI GGGAC 2 cut(s) 330, 948
BsnI GGCC 5 cut(s) 1028, 1070, 1204, 1252, 1312
Bso31I GGTCTC 1 cut(s) 526
Bsp1286I GDGCHC 2 cut(s) 28, 247
Bsp19I CCATGG 1 cut(s) 1044
BspACI CCGC 9 cut(s) 174, 705, 766, 867, 869, 966, 970, 1229, 1283
BspANI GGCC 5 cut(s) 1028, 1070, 1204, 1252, 1312
BspCNI CTCAG 4 cut(s) 148, 574, 724, 1381
BspFNI CGCG 1 cut(s) 869
BspLI GGNNCC 2 cut(s) 166, 453
BspPI GGATC 6 cut(s) 96, 485, 667, 696, 920, 1412
BspQI GCTCTTC 1 cut(s) 702
BspTNI GGTCTC 1 cut(s) 526
BsrDI GCAATG 1 cut(s) 366
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 5 cut(s) 130, 455, 1156, 1205, 1249
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 4 cut(s) 148, 867, 934, 1044
BssSI CACGAG 1 cut(s) 1133
BssT1I CCWWGG 1 cut(s) 1044
Bst2BI CACGAG 1 cut(s) 1133
Bst4CI ACNGT 4 cut(s) 23, 41, 839, 1296
Bst6I CTCTTC 3 cut(s) 189, 702, 1446
BstBAI YACGTR 1 cut(s) 227
BstC8I GCNNGC 6 cut(s) 366, 370, 774, 970, 1234, 1387
BstDEI CTNAG 8 cut(s) 135, 501, 582, 732, 779, 1164, 1368, 1475
BstDSI CCRYGG 2 cut(s) 867, 1044
BstENI CCTNNNNNAGG 2 cut(s) 933, 1064
BstF5I GGATG 4 cut(s) 900, 1309, 1313, 1420
BstFNI CGCG 1 cut(s) 869
BstH2I RGCGCY 1 cut(s) 438
BstHHI GCGC 3 cut(s) 359, 437, 617
BstMAI GTCTC 4 cut(s) 138, 526, 550, 581
BstMCI CGRYCG 1 cut(s) 640
BstMWI GCNNNNNNNGC 4 cut(s) 119, 365, 657, 1268
BstNSI RCATGY 1 cut(s) 1430
BstSCI CCNGG 2 cut(s) 147, 1070
BstSFI CTRYAG 2 cut(s) 507, 1272
BstSLI GKGCMC 1 cut(s) 28
BstUI CGCG 1 cut(s) 869
BstV1I GCAGC 2 cut(s) 756, 832
BstV2I GAAGAC 2 cut(s) 305, 407
BstX2I RGATCY 3 cut(s) 672, 912, 1481
BstYI RGATCY 3 cut(s) 672, 912, 1481
BsuI GTATCC 2 cut(s) 49, 400
BsuRI GGCC 5 cut(s) 1028, 1070, 1204, 1252, 1312
BtgI CCRYGG 2 cut(s) 867, 1044
BtgZI GCGATG 2 cut(s) 154, 1136
BtsCI GGATG 4 cut(s) 900, 1309, 1313, 1420
BtsIMutI CAGTG 3 cut(s) 28, 1149, 1212
Cac8I GCNNGC 6 cut(s) 366, 370, 774, 970, 1234, 1387
CfoI GCGC 3 cut(s) 359, 437, 617
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 2 cut(s) 1057, 1069
Cfr42I CCGCGG 1 cut(s) 870
Csp6I GTAC 4 cut(s) 224, 236, 856, 1318
CspAI ACCGGT 1 cut(s) 157
CspCI CAANNNNNGTGG 2 cut(s) 1410, 1445
CviQI GTAC 4 cut(s) 224, 236, 856, 1318
DdeI CTNAG 8 cut(s) 135, 501, 582, 732, 779, 1164, 1368, 1475
DraI TTTAAA 1 cut(s) 376
DraIII CACNNNGTG 1 cut(s) 1176
DriI GACNNNNNGTC 2 cut(s) 43, 1330
EaeI YGGCCR 4 cut(s) 1026, 1202, 1250, 1310
Eam1104I CTCTTC 3 cut(s) 189, 702, 1446
Eam1105I GACNNNNNGTC 2 cut(s) 43, 1330
EarI CTCTTC 3 cut(s) 189, 702, 1446
EciI GGCGGA 1 cut(s) 1298
Eco130I CCWWGG 1 cut(s) 1044
Eco31I GGTCTC 1 cut(s) 526
Eco47I GGWCC 1 cut(s) 1057
Eco57I CTGAAG 3 cut(s) 174, 317, 964
EcoNI CCTNNNNNAGG 2 cut(s) 933, 1064
EcoT14I CCWWGG 1 cut(s) 1044
ErhI CCWWGG 1 cut(s) 1044
FalI AAGNNNNNCTT 1 cut(s) 1471
FaqI GGGAC 2 cut(s) 330, 948
FauI CCCGC 2 cut(s) 973, 977
FauNDI CATATG 2 cut(s) 789, 1461
FbaI TGATCA 1 cut(s) 211
FblI GTMKAC 3 cut(s) 141, 459, 506
Fnu4HI GCNGC 5 cut(s) 174, 767, 770, 821, 1230
FokI GGATG 4 cut(s) 887, 1316, 1320, 1427
Fsp4HI GCNGC 5 cut(s) 174, 767, 770, 821, 1230
FspBI CTAG 4 cut(s) 35, 248, 524, 1359
FspI TGCGCA 1 cut(s) 616
GlaI GCGC 3 cut(s) 358, 436, 616
GluI GCNGC 5 cut(s) 174, 767, 770, 821, 1230
GsuI CTGGAG 1 cut(s) 438
HaeII RGCGCY 1 cut(s) 438
HaeIII GGCC 5 cut(s) 1028, 1070, 1204, 1252, 1312
HapII CCGG 6 cut(s) 62, 148, 158, 1072, 1118, 1313
HhaI GCGC 3 cut(s) 359, 437, 617
Hin6I GCGC 3 cut(s) 357, 435, 615
HinP1I GCGC 3 cut(s) 357, 435, 615
HincII GTYRAC 1 cut(s) 460
HindII GTYRAC 1 cut(s) 460
HindIII AAGCTT 4 cut(s) 111, 344, 370, 781
HinfI GANTC 7 cut(s) 80, 461, 558, 728, 896, 1129, 1341
HpaII CCGG 6 cut(s) 62, 148, 158, 1072, 1118, 1313
HphI GGTGA 1 cut(s) 362
Hpy166II GTNNAC 5 cut(s) 26, 142, 460, 507, 874
Hpy188III TCNNGA 6 cut(s) 202, 295, 397, 442, 1133, 1335
Hpy8I GTNNAC 5 cut(s) 26, 142, 460, 507, 874
Hpy99I CGWCG 2 cut(s) 1269, 1328
HpyAV CCTTC 1 cut(s) 1294
HpyCH4III ACNGT 4 cut(s) 23, 41, 839, 1296
HpyCH4IV ACGT 2 cut(s) 226, 885
HpyCH4V TGCA 2 cut(s) 26, 772
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 365, 657, 1268
HpyF3I CTNAG 8 cut(s) 135, 501, 582, 732, 779, 1164, 1368, 1475
HpySE526I ACGT 2 cut(s) 226, 885
HspAI GCGC 3 cut(s) 357, 435, 615
Ksp22I TGATCA 1 cut(s) 211
KspI CCGCGG 1 cut(s) 870
LguI GCTCTTC 1 cut(s) 702
LmnI GCTCC 2 cut(s) 457, 1179
Lsp1109I GCAGC 2 cut(s) 756, 832
LweI GCATC 1 cut(s) 1086
MaeI CTAG 4 cut(s) 35, 248, 524, 1359
MaeII ACGT 2 cut(s) 226, 885
MaeIII GTNAC 8 cut(s) 92, 103, 350, 839, 1130, 1147, 1157, 1218
MflI RGATCY 3 cut(s) 672, 912, 1481
MhlI GDGCHC 2 cut(s) 28, 247
MlsI TGGCCA 2 cut(s) 1028, 1204
MluCI AATT 3 cut(s) 276, 1000, 1011
MluNI TGGCCA 2 cut(s) 1028, 1204
MlyI GAGTC 5 cut(s) 74, 455, 552, 890, 1138
MmeI TCCRAC 3 cut(s) 626, 931, 1445
Mox20I TGGCCA 2 cut(s) 1028, 1204
MroXI GAANNNNTTC 1 cut(s) 1483
MscI TGGCCA 2 cut(s) 1028, 1204
MseI TTAA 3 cut(s) 8, 375, 1498
Msp20I TGGCCA 2 cut(s) 1028, 1204
MspA1I CMGCKG 1 cut(s) 869
MspI CCGG 6 cut(s) 62, 148, 158, 1072, 1118, 1313
MspR9I CCNGG 2 cut(s) 149, 1072
MvnI CGCG 1 cut(s) 869
MwoI GCNNNNNNNGC 4 cut(s) 119, 365, 657, 1268
NciI CCSGG 2 cut(s) 149, 1072
NcoI CCATGG 1 cut(s) 1044
NdeI CATATG 2 cut(s) 789, 1461
NlaIV GGNNCC 2 cut(s) 166, 453
NmuCI GTSAC 5 cut(s) 103, 350, 1130, 1147, 1157
NsbI TGCGCA 1 cut(s) 616
NspI RCATGY 1 cut(s) 1430
PciSI GCTCTTC 1 cut(s) 702
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PdmI GAANNNNTTC 1 cut(s) 1483
PfeI GAWTC 2 cut(s) 728, 1341
Pfl23II CGTACG 1 cut(s) 223
PflFI GACNNNGTC 1 cut(s) 1375
PinAI ACCGGT 1 cut(s) 157
PkrI GCNGC 5 cut(s) 175, 768, 771, 822, 1231
Ple19I CGATCG 1 cut(s) 640
PleI GAGTC 5 cut(s) 74, 455, 552, 890, 1137
PpsI GAGTC 5 cut(s) 74, 455, 552, 890, 1137
Ppu21I YACGTR 1 cut(s) 227
PspLI CGTACG 1 cut(s) 223
PspN4I GGNNCC 2 cut(s) 166, 453
PspPI GGNCC 2 cut(s) 1057, 1069
PsuI RGATCY 3 cut(s) 672, 912, 1481
PsyI GACNNNGTC 1 cut(s) 1375
PvuI CGATCG 1 cut(s) 640
RsaI GTAC 4 cut(s) 225, 237, 857, 1319
RsaNI GTAC 4 cut(s) 224, 236, 856, 1318
SacII CCGCGG 1 cut(s) 870
SalI GTCGAC 1 cut(s) 458
SapI GCTCTTC 1 cut(s) 702
SaqAI TTAA 3 cut(s) 8, 375, 1498
SatI GCNGC 5 cut(s) 174, 767, 770, 821, 1230
Sau96I GGNCC 2 cut(s) 1057, 1069
ScaI AGTACT 2 cut(s) 857, 1319
SchI GAGTC 5 cut(s) 74, 455, 552, 890, 1138
ScrFI CCNGG 2 cut(s) 149, 1072
SduI GDGCHC 2 cut(s) 28, 247
SfaNI GCATC 1 cut(s) 1086
SfcI CTRYAG 2 cut(s) 507, 1272
Sfr303I CCGCGG 1 cut(s) 870
SgrBI CCGCGG 1 cut(s) 870
SinI GGWCC 1 cut(s) 1057
Sse9I AATT 3 cut(s) 276, 1000, 1011
SsiI CCGC 9 cut(s) 174, 705, 766, 867, 869, 966, 970, 1229, 1283
SspMI CTAG 4 cut(s) 35, 248, 524, 1359
StyD4I CCNGG 2 cut(s) 147, 1070
StyI CCWWGG 1 cut(s) 1044
TaaI ACNGT 4 cut(s) 23, 41, 839, 1296
TaiI ACGT 2 cut(s) 229, 888
TaqI TCGA 6 cut(s) 333, 459, 629, 636, 700, 810
TasI AATT 3 cut(s) 276, 1000, 1011
TatI WGTACW 2 cut(s) 855, 1317
TauI GCSGC 3 cut(s) 176, 769, 1232
TfiI GAWTC 2 cut(s) 728, 1341
Tru1I TTAA 3 cut(s) 8, 375, 1498
Tru9I TTAA 3 cut(s) 8, 375, 1498
TscAI CASTG 3 cut(s) 28, 1156, 1212
TseFI GTSAC 5 cut(s) 103, 350, 1130, 1147, 1157
TseI GCWGC 2 cut(s) 769, 820
Tsp45I GTSAC 5 cut(s) 103, 350, 1130, 1147, 1157
TspDTI ATGAA 8 cut(s) 89, 275, 296, 679, 736, 913, 1333, 1478
TspGWI ACGGA 4 cut(s) 419, 863, 1206, 1341
TspRI CASTG 3 cut(s) 28, 1156, 1212
Tth111I GACNNNGTC 1 cut(s) 1375
VneI GTGCAC 1 cut(s) 24
VpaK11BI GGWCC 1 cut(s) 1057
XagI CCTNNNNNAGG 2 cut(s) 933, 1064
XceI RCATGY 1 cut(s) 1430
XcmI CCANNNNNNNNNTGG 4 cut(s) 445, 1051, 1212, 1408
XmiI GTMKAC 3 cut(s) 141, 459, 506
XmnI GAANNNNTTC 1 cut(s) 1483
XspI CTAG 4 cut(s) 35, 248, 524, 1359
ZrmI AGTACT 2 cut(s) 857, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.