AT1G72570

AP2-like ethylene-responsive transcription factor AIL1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
27331381 .. 27333698
2318 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G72570.1

Sequence Viewer

Length: 1248 bp
ATGAAGAAATGGTTGGGATTTTCATTGACACCTCCTTTGAGAATCTGCAATAGTGAAGAAGAAGAACTTAGGCATGACGGTTCCGATGTTTGGAGATATGATATTAACTTTGATCATCATCATCATGATGAAGACGTTCCAAAGGTGGAAGATCTCCTCTCAAACTCTCATCAAACCGAGTATCCTATAAACCATAACCAAACCAATGTCAACTGCACCACTGTGGTTAACAGGTTAAACCCACCCGGTTACCTTCTCCACGACCAAACCGTAGTTACACCACATTACCCGAACCTAGATCCGAACCTTAGCAATGATTATGGAGGTTTTGAGAGGGTCGGTTCGGTCTCGGTTTTCAAATCTTGGTTAGAGCAAGGCACTCCAGCATTCCCACTCTCGAGTCATTACGTTACTGAAGAGGCTGGTACGAGCAATAATATTAGTCATTTTAGTAACGAAGAGACTGGTTATAACACCAATGGCTCAATGCTATCATTGGCTTTGAGCCATGGGGCTTGTTCTGATTTGATCAACGAATCGAATGTATCCGCACGGGTCGAAGAACCGGTTAAGGTAGATGAGAAGCGGAAGAGATTGGTTGTTAAACCTCAGGTAAAGGAATCCGTTCCTCGGAAGTCGGTTGATAGTTATGGACAAAGAACTTCTCAGTATCGTGGAGTTACAAGGCATAGATGGACAGGGAGATATGAAGCTCACTTATGGGATAATAGCTGTAAGAAGGAGGGACAGACAAGGAGAGGAAGACAAGTGTATCTTGGAGGGTATGATGAGGAGGAGAAAGCAGCGAGGGCATATGATTTAGCGGCTCTGAAGTATTGGGGTCCTACCACTCACTTAAATTTCCCTTTGAGTAATTACGAAAAGGAGATCGAGGAACTCAATAACATGAATCGGCAAGAATTTGTTGCCATGTTGAGGAGGAATAGCAGCGGGTTTTCGAGGGGAGCTTCCGTGTATAGAGGAGTTACAAGGCATCATCAACATGGAAGGTGGCAAGCCAGAATTGGAAGAGTTGCTGGAAACAAGGACTTGTACCTTGGAACATTTAGCACGCAAGAAGAAGCAGCGGAGGCGTACGATATCGCGGCAATTAAATTCAGAGGCCTAAACGCTGTAACCAATTTCGATATAAATAGATATGACGTGAAGAGGATATGTTCAAGCTCAACGATTGTTGATAGCGACCAGGCCAAACATTCTCCCACCAGCTCTGGCGCCGGCCACTAA

Protein Analysis

415

Amino Acids

47.13

Weight (kDa)

6.58

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AP2 PF00847 223 - 281 3.5e-12 AP2 domain
AP2 PF00847 324 - 375 1.4e-09 AP2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010758)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 471
AccB1I GGYRCC 1 cut(s) 1235
AccII CGCG 1 cut(s) 1106
AciI CCGC 6 cut(s) 549, 586, 824, 951, 1088, 1106
AclWI GGATC 1 cut(s) 293
AcoI YGGCCR 1 cut(s) 1240
AcsI RAATTY 3 cut(s) 859, 920, 1115
AcuI CTGAAG 2 cut(s) 435, 851
AcyI GRCGYC 1 cut(s) 1236
AfaI GTAC 3 cut(s) 427, 1055, 1097
AfiI CCNNNNNNNGG 3 cut(s) 90, 630, 936
AgeI ACCGGT 1 cut(s) 565
AgsI TTSAA 2 cut(s) 358, 1182
AjiI CACGTC 1 cut(s) 1165
AjnI CCWGG 1 cut(s) 1206
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AleI CACNNNNGTG 1 cut(s) 221
AluBI AGCT 5 cut(s) 713, 732, 968, 1185, 1230
AluI AGCT 5 cut(s) 713, 732, 968, 1185, 1230
Alw26I GTCTC 2 cut(s) 352, 455
AlwI GGATC 1 cut(s) 293
Ama87I CYCGRG 1 cut(s) 397
AoxI GGCC 3 cut(s) 1123, 1209, 1240
ApeKI GCWGC 3 cut(s) 803, 948, 1085
ApoI RAATTY 3 cut(s) 859, 920, 1115
ArsI GACNNNNNNTTYG 2 cut(s) 19, 51
AsiGI ACCGGT 1 cut(s) 565
Asp700I GAANNNNTTC 2 cut(s) 135, 624
AspLEI GCGC 1 cut(s) 1238
AspS9I GGNCC 1 cut(s) 842
AsuC2I CCSGG 1 cut(s) 246
AvaI CYCGRG 1 cut(s) 397
AvaII GGWCC 1 cut(s) 842
AxyI CCTNAGG 1 cut(s) 609
BaeI ACNNNNGTAYC 2 cut(s) 755, 788
BanI GGYRCC 1 cut(s) 1235
BbsI GAAGAC 2 cut(s) 138, 769
BbvI GCAGC 3 cut(s) 815, 960, 1097
BccI CCATC 1 cut(s) 687
BciT130I CCWGG 1 cut(s) 1208
BciVI GTATCC 2 cut(s) 192, 556
BclI TGATCA 2 cut(s) 112, 528
BcnI CCSGG 1 cut(s) 246
BcoDI GTCTC 2 cut(s) 352, 455
BfaI CTAG 1 cut(s) 296
BfoI RGCGCY 1 cut(s) 1239
BfuI GTATCC 2 cut(s) 192, 556
BglII AGATCT 1 cut(s) 151
BisI GCNGC 5 cut(s) 804, 825, 949, 1086, 1107
BlsI GCNGC 5 cut(s) 805, 826, 950, 1087, 1108
Bme1390I CCNGG 2 cut(s) 246, 1208
Bme18I GGWCC 1 cut(s) 842
BmeT110I CYCGRG 1 cut(s) 397
BmgBI CACGTC 1 cut(s) 1165
BmgT120I GGNCC 1 cut(s) 842
BmiI GGNNCC 3 cut(s) 82, 843, 1237
BmrFI CCNGG 2 cut(s) 246, 1208
BmsI GCATC 1 cut(s) 1003
BpiI GAAGAC 2 cut(s) 138, 769
BpmI CTGGAG 1 cut(s) 366
Bpu10I CCTNAGC 1 cut(s) 308
BpuMI CCSGG 1 cut(s) 246
BsaBI GATNNNNATC 1 cut(s) 117
BsaHI GRCGYC 1 cut(s) 1236
BsaI GGTCTC 1 cut(s) 352
BsaJI CCNNGG 3 cut(s) 508, 629, 1057
BsaWI WCCGGW 1 cut(s) 565
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 630, 936
Bse118I RCCGGY 2 cut(s) 565, 1238
Bse1I ACTGG 1 cut(s) 469
Bse21I CCTNAGG 1 cut(s) 609
Bse3DI GCAATG 1 cut(s) 319
Bse8I GATNNNNATC 1 cut(s) 117
BseBI CCWGG 1 cut(s) 1208
BseDI CCNNGG 3 cut(s) 508, 629, 1057
BseJI GATNNNNATC 1 cut(s) 117
BseLI CCNNNNNNNGG 3 cut(s) 90, 630, 936
BseMI GCAATG 1 cut(s) 319
BseMII CTCAG 2 cut(s) 623, 680
BseNI ACTGG 1 cut(s) 469
BseRI GAGGAG 5 cut(s) 146, 806, 809, 952, 996
BseXI GCAGC 3 cut(s) 815, 960, 1097
BsgI GTGCAG 1 cut(s) 199
Bsh1236I CGCG 1 cut(s) 1106
BshFI GGCC 3 cut(s) 1125, 1211, 1242
BshNI GGYRCC 1 cut(s) 1235
BshTI ACCGGT 1 cut(s) 565
BsiHKCI CYCGRG 1 cut(s) 397
BsiSI CCGG 3 cut(s) 246, 566, 1239
BsiWI CGTACG 1 cut(s) 1095
BslFI GGGAC 1 cut(s) 759
BslI CCNNNNNNNGG 3 cut(s) 90, 630, 936
BsmAI GTCTC 2 cut(s) 352, 455
BsmFI GGGAC 1 cut(s) 759
BsmI GAATGC 1 cut(s) 386
BsnI GGCC 3 cut(s) 1125, 1211, 1242
Bso31I GGTCTC 1 cut(s) 352
BsoBI CYCGRG 1 cut(s) 397
Bsp143I GATC 5 cut(s) 112, 151, 298, 528, 888
Bsp19I CCATGG 1 cut(s) 508
BspACI CCGC 6 cut(s) 549, 586, 824, 951, 1088, 1106
BspANI GGCC 3 cut(s) 1125, 1211, 1242
BspCNI CTCAG 2 cut(s) 622, 679
BspFNI CGCG 1 cut(s) 1106
BspHI TCATGA 1 cut(s) 124
BspLI GGNNCC 3 cut(s) 82, 843, 1237
BspPI GGATC 1 cut(s) 293
BspT107I GGYRCC 1 cut(s) 1235
BspTNI GGTCTC 1 cut(s) 352
BsrDI GCAATG 1 cut(s) 319
BsrFI RCCGGY 2 cut(s) 565, 1238
BsrI ACTGG 1 cut(s) 469
BssAI RCCGGY 2 cut(s) 565, 1238
BssECI CCNNGG 3 cut(s) 508, 629, 1057
BssMI GATC 5 cut(s) 112, 151, 298, 528, 888
BssNI GRCGYC 1 cut(s) 1236
BssT1I CCWWGG 2 cut(s) 508, 1057
Bst2UI CCWGG 1 cut(s) 1208
Bst4CI ACNGT 3 cut(s) 80, 223, 271
Bst6I CTCTTC 5 cut(s) 411, 453, 584, 1024, 1163
BstACI GRCGYC 1 cut(s) 1236
BstC8I GCNNGC 3 cut(s) 1017, 1073, 1240
BstDEI CTNAG 4 cut(s) 68, 308, 609, 666
BstDSI CCRYGG 1 cut(s) 508
BstEII GGTNACC 1 cut(s) 248
BstFNI CGCG 1 cut(s) 1106
BstH2I RGCGCY 1 cut(s) 1239
BstHHI GCGC 1 cut(s) 1238
BstKTI GATC 5 cut(s) 115, 154, 301, 531, 891
BstMAI GTCTC 2 cut(s) 352, 455
BstMBI GATC 5 cut(s) 112, 151, 298, 528, 888
BstMWI GCNNNNNNNGC 2 cut(s) 809, 1091
BstNI CCWGG 1 cut(s) 1208
BstPI GGTNACC 1 cut(s) 248
BstSCI CCNGG 2 cut(s) 244, 1206
BstUI CGCG 1 cut(s) 1106
BstV1I GCAGC 3 cut(s) 815, 960, 1097
BstV2I GAAGAC 2 cut(s) 138, 769
BstX2I RGATCY 2 cut(s) 151, 298
BstYI RGATCY 2 cut(s) 151, 298
Bsu36I CCTNAGG 1 cut(s) 609
BsuI GTATCC 2 cut(s) 192, 556
BsuRI GGCC 3 cut(s) 1125, 1211, 1242
BtgI CCRYGG 1 cut(s) 508
BtrI CACGTC 1 cut(s) 1165
BtsIMutI CAGTG 1 cut(s) 219
Cac8I GCNNGC 3 cut(s) 1017, 1073, 1240
CciI TCATGA 1 cut(s) 124
CfoI GCGC 1 cut(s) 1238
Cfr10I RCCGGY 2 cut(s) 565, 1238
Cfr13I GGNCC 1 cut(s) 842
Csp6I GTAC 3 cut(s) 426, 1054, 1096
CspAI ACCGGT 1 cut(s) 565
CviAII CATG 6 cut(s) 74, 125, 509, 907, 931, 1004
CviQI GTAC 3 cut(s) 426, 1054, 1096
DdeI CTNAG 4 cut(s) 68, 308, 609, 666
DinI GGCGCC 1 cut(s) 1237
DpnI GATC 5 cut(s) 114, 153, 300, 530, 890
DpnII GATC 5 cut(s) 112, 151, 298, 528, 888
EaeI YGGCCR 1 cut(s) 1240
Eam1104I CTCTTC 5 cut(s) 411, 453, 584, 1024, 1163
EarI CTCTTC 5 cut(s) 411, 453, 584, 1024, 1163
Eco130I CCWWGG 2 cut(s) 508, 1057
Eco147I AGGCCT 1 cut(s) 1125
Eco31I GGTCTC 1 cut(s) 352
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 1 cut(s) 842
Eco57I CTGAAG 2 cut(s) 435, 851
Eco81I CCTNAGG 1 cut(s) 609
Eco88I CYCGRG 1 cut(s) 397
Eco91I GGTNACC 1 cut(s) 248
EcoO109I RGGNCCY 1 cut(s) 842
EcoO65I GGTNACC 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 1206
EcoRV GATATC 1 cut(s) 1102
EcoT14I CCWWGG 2 cut(s) 508, 1057
EgeI GGCGCC 1 cut(s) 1237
EheI GGCGCC 1 cut(s) 1237
ErhI CCWWGG 2 cut(s) 508, 1057
FaeI CATG 6 cut(s) 77, 128, 512, 910, 934, 1007
FalI AAGNNNNNCTT 4 cut(s) 51, 83, 759, 791
FaqI GGGAC 1 cut(s) 759
FatI CATG 6 cut(s) 73, 124, 508, 906, 930, 1003
FauI CCCGC 1 cut(s) 944
FauNDI CATATG 1 cut(s) 814
FbaI TGATCA 2 cut(s) 112, 528
Fnu4HI GCNGC 5 cut(s) 804, 825, 949, 1086, 1107
Fsp4HI GCNGC 5 cut(s) 804, 825, 949, 1086, 1107
FspBI CTAG 1 cut(s) 296
GlaI GCGC 1 cut(s) 1237
GluI GCNGC 5 cut(s) 804, 825, 949, 1086, 1107
GsuI CTGGAG 1 cut(s) 366
HaeII RGCGCY 1 cut(s) 1239
HaeIII GGCC 3 cut(s) 1125, 1211, 1242
HapII CCGG 3 cut(s) 246, 566, 1239
HhaI GCGC 1 cut(s) 1238
Hin1I GRCGYC 1 cut(s) 1236
Hin1II CATG 6 cut(s) 77, 128, 512, 910, 934, 1007
Hin6I GCGC 1 cut(s) 1236
HinP1I GCGC 1 cut(s) 1236
HincII GTYRAC 2 cut(s) 211, 229
HindII GTYRAC 2 cut(s) 211, 229
HinfI GANTC 5 cut(s) 42, 400, 536, 620, 910
HpaI GTTAAC 1 cut(s) 229
HpaII CCGG 3 cut(s) 246, 566, 1239
Hpy166II GTNNAC 2 cut(s) 211, 229
Hpy188I TCNGA 6 cut(s) 85, 303, 523, 633, 831, 1121
Hpy188III TCNNGA 2 cut(s) 125, 397
Hpy8I GTNNAC 2 cut(s) 211, 229
HpyAV CCTTC 3 cut(s) 263, 733, 1002
HpyCH4III ACNGT 3 cut(s) 80, 223, 271
HpyCH4IV ACGT 3 cut(s) 135, 408, 1164
HpyCH4V TGCA 2 cut(s) 48, 216
HpyF10VI GCNNNNNNNGC 2 cut(s) 809, 1091
HpyF3I CTNAG 4 cut(s) 68, 308, 609, 666
HpySE526I ACGT 3 cut(s) 135, 408, 1164
Hsp92I GRCGYC 1 cut(s) 1236
Hsp92II CATG 6 cut(s) 77, 128, 512, 910, 934, 1007
HspAI GCGC 1 cut(s) 1236
KasI GGCGCC 1 cut(s) 1235
KroI GCCGGC 1 cut(s) 1238
KroNI GCCGGC 1 cut(s) 1240
Ksp22I TGATCA 2 cut(s) 112, 528
KspAI GTTAAC 1 cut(s) 229
Kzo9I GATC 5 cut(s) 112, 151, 298, 528, 888
LmnI GCTCC 1 cut(s) 965
Lsp1109I GCAGC 3 cut(s) 815, 960, 1097
LweI GCATC 1 cut(s) 1003
MaeI CTAG 1 cut(s) 296
MaeII ACGT 3 cut(s) 135, 408, 1164
MaeIII GTNAC 7 cut(s) 248, 274, 409, 452, 679, 985, 1135
MalI GATC 5 cut(s) 114, 153, 300, 530, 890
MboI GATC 5 cut(s) 112, 151, 298, 528, 888
MflI RGATCY 2 cut(s) 151, 298
MluCI AATT 7 cut(s) 859, 874, 920, 1023, 1110, 1115, 1141
Mly113I GGCGCC 1 cut(s) 1236
MlyI GAGTC 1 cut(s) 409
MroNI GCCGGC 1 cut(s) 1238
MroXI GAANNNNTTC 2 cut(s) 135, 624
MseI TTAA 7 cut(s) 105, 228, 236, 570, 603, 857, 1113
MslI CAYNNNNRTG 4 cut(s) 123, 126, 221, 1002
MspA1I CMGCKG 2 cut(s) 951, 1088
MspI CCGG 3 cut(s) 246, 566, 1239
MspR9I CCNGG 2 cut(s) 246, 1208
Mva1269I GAATGC 1 cut(s) 386
MvaI CCWGG 1 cut(s) 1208
MvnI CGCG 1 cut(s) 1106
MwoI GCNNNNNNNGC 2 cut(s) 809, 1091
NaeI GCCGGC 1 cut(s) 1240
NarI GGCGCC 1 cut(s) 1236
NciI CCSGG 1 cut(s) 246
NcoI CCATGG 1 cut(s) 508
NdeI CATATG 1 cut(s) 814
NdeII GATC 5 cut(s) 112, 151, 298, 528, 888
NgoMIV GCCGGC 1 cut(s) 1238
NlaIII CATG 6 cut(s) 77, 128, 512, 910, 934, 1007
NlaIV GGNNCC 3 cut(s) 82, 843, 1237
OliI CACNNNNGTG 1 cut(s) 221
PaeR7I CTCGAG 1 cut(s) 397
PagI TCATGA 1 cut(s) 124
PceI AGGCCT 1 cut(s) 1125
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PctI GAATGC 1 cut(s) 386
PdiI GCCGGC 1 cut(s) 1240
PdmI GAANNNNTTC 2 cut(s) 135, 624
PfeI GAWTC 4 cut(s) 42, 536, 620, 910
Pfl23II CGTACG 1 cut(s) 1095
PinAI ACCGGT 1 cut(s) 565
PkrI GCNGC 5 cut(s) 805, 826, 950, 1087, 1108
PleI GAGTC 1 cut(s) 408
PluTI GGCGCC 1 cut(s) 1239
PpsI GAGTC 1 cut(s) 408
PpuMI RGGWCCY 1 cut(s) 842
PsiI TTATAA 1 cut(s) 471
Psp5II RGGWCCY 1 cut(s) 842
Psp6I CCWGG 1 cut(s) 1206
PspEI GGTNACC 1 cut(s) 248
PspGI CCWGG 1 cut(s) 1206
PspLI CGTACG 1 cut(s) 1095
PspN4I GGNNCC 3 cut(s) 82, 843, 1237
PspPI GGNCC 1 cut(s) 842
PspPPI RGGWCCY 1 cut(s) 842
PsuI RGATCY 2 cut(s) 151, 298
RsaI GTAC 3 cut(s) 427, 1055, 1097
RsaNI GTAC 3 cut(s) 426, 1054, 1096
RseI CAYNNNNRTG 4 cut(s) 123, 126, 221, 1002
SaqAI TTAA 7 cut(s) 105, 228, 236, 570, 603, 857, 1113
SatI GCNGC 5 cut(s) 804, 825, 949, 1086, 1107
Sau3AI GATC 5 cut(s) 112, 151, 298, 528, 888
Sau96I GGNCC 1 cut(s) 842
SchI GAGTC 1 cut(s) 409
ScrFI CCNGG 2 cut(s) 246, 1208
SfaNI GCATC 1 cut(s) 1003
SfoI GGCGCC 1 cut(s) 1237
Sfr274I CTCGAG 1 cut(s) 397
SinI GGWCC 1 cut(s) 842
SlaI CTCGAG 1 cut(s) 397
SmiMI CAYNNNNRTG 4 cut(s) 123, 126, 221, 1002
SmlI CTYRAG 1 cut(s) 397
SmoI CTYRAG 1 cut(s) 397
Sse9I AATT 7 cut(s) 859, 874, 920, 1023, 1110, 1115, 1141
SseBI AGGCCT 1 cut(s) 1125
SsiI CCGC 6 cut(s) 549, 586, 824, 951, 1088, 1106
SspDI GGCGCC 1 cut(s) 1235
SspI AATATT 1 cut(s) 439
SspMI CTAG 1 cut(s) 296
StuI AGGCCT 1 cut(s) 1125
StyD4I CCNGG 2 cut(s) 244, 1206
StyI CCWWGG 2 cut(s) 508, 1057
TaaI ACNGT 3 cut(s) 80, 223, 271
TaiI ACGT 3 cut(s) 138, 411, 1167
TaqI TCGA 6 cut(s) 398, 539, 558, 891, 959, 1146
TaqII GACCGA 1 cut(s) 334
TasI AATT 7 cut(s) 859, 874, 920, 1023, 1110, 1115, 1141
TauI GCSGC 2 cut(s) 827, 1109
TfiI GAWTC 4 cut(s) 42, 536, 620, 910
Tru1I TTAA 7 cut(s) 105, 228, 236, 570, 603, 857, 1113
Tru9I TTAA 7 cut(s) 105, 228, 236, 570, 603, 857, 1113
TscAI CASTG 1 cut(s) 226
TseI GCWGC 3 cut(s) 803, 948, 1085
TspDTI ATGAA 5 cut(s) 12, 17, 144, 723, 923
TspGWI ACGGA 2 cut(s) 613, 961
TspRI CASTG 1 cut(s) 226
VpaK11BI GGWCC 1 cut(s) 842
XapI RAATTY 3 cut(s) 859, 920, 1115
XhoI CTCGAG 1 cut(s) 397
XmnI GAANNNNTTC 2 cut(s) 135, 624
XspI CTAG 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.