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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT2G16575 |
| fragaria_vesca | FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g25880 |
| malus_domestica | MD03G1240400.v1.1 MD11G1259700.v1.1 |
| prunus_persica | Prupe.4G170200_v2.0.a1 Prupe.4G170200_v2.0.a1 |
| pyrus_communis | pycom03g18560 pycom11g22940 |
| rosa_chinensis | RchiOBHm_Chr5g0031461 |
| rosa_laevigata | RLG00000002875 RLG00000029120 RLG00000033309 |
| rosa_multiflora | Rmu_sc0000404.1_g000002 |
| rosa_roxburghii | Rroxscaffold_176G00431450 Rroxscaffold_1G00048870 Rroxscaffold_6G00411210 |
| rosa_rugosa | Rorug05G0126000 |
| rosa_samantha | Rh5AG218800 Rh5BG218100 Rh5CG241800 Rh5DG223400 |
| rosa_wichuraiana | Rw5G019960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 196, 836 |
| AccII | CGCG | 1 cut(s) | 217 |
| AciI | CCGC | 6 cut(s) | 215, 558, 659, 1526, 1659, 1829 |
| AclWI | GGATC | 5 cut(s) | 230, 1259, 1509, 1649, 1734 |
| AcoI | YGGCCR | 1 cut(s) | 1848 |
| AcsI | RAATTY | 4 cut(s) | 58, 751, 914, 1130 |
| AcuI | CTGAAG | 1 cut(s) | 1158 |
| AcyI | GRCGYC | 2 cut(s) | 193, 833 |
| AfaI | GTAC | 6 cut(s) | 186, 410, 844, 960, 1060, 1820 |
| AflIII | ACRYGT | 2 cut(s) | 271, 688 |
| AjnI | CCWGG | 2 cut(s) | 265, 943 |
| AleI | CACNNNNGTG | 1 cut(s) | 1447 |
| AluBI | AGCT | 8 cut(s) | 356, 740, 814, 1439, 1705, 1807, 1896, 1933 |
| AluI | AGCT | 8 cut(s) | 356, 740, 814, 1439, 1705, 1807, 1896, 1933 |
| Alw21I | GWGCWC | 1 cut(s) | 98 |
| Alw26I | GTCTC | 6 cut(s) | 483, 888, 1017, 1104, 1164, 1869 |
| AlwI | GGATC | 5 cut(s) | 230, 1259, 1509, 1649, 1734 |
| Ama87I | CYCGRG | 1 cut(s) | 1671 |
| AoxI | GGCC | 2 cut(s) | 1426, 1848 |
| ApeKI | GCWGC | 2 cut(s) | 1439, 1804 |
| ApoI | RAATTY | 4 cut(s) | 58, 751, 914, 1130 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 211, 243 |
| AseI | ATTAAT | 1 cut(s) | 1548 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 708, 1837 |
| AspS9I | GGNCC | 5 cut(s) | 5, 169, 1076, 1427, 1725 |
| AsuII | TTCGAA | 1 cut(s) | 132 |
| AvaI | CYCGRG | 1 cut(s) | 1671 |
| AvaII | GGWCC | 4 cut(s) | 5, 169, 1076, 1725 |
| BalI | TGGCCA | 1 cut(s) | 1850 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 631, 663, 1131, 1163 |
| BbsI | GAAGAC | 1 cut(s) | 1683 |
| Bbv12I | GWGCWC | 1 cut(s) | 98 |
| BbvI | GCAGC | 2 cut(s) | 1426, 1816 |
| BccI | CCATC | 4 cut(s) | 365, 488, 767, 1418 |
| BciT130I | CCWGG | 2 cut(s) | 267, 945 |
| BciVI | GTATCC | 1 cut(s) | 1573 |
| BcoDI | GTCTC | 6 cut(s) | 483, 888, 1017, 1104, 1164, 1869 |
| BfaI | CTAG | 2 cut(s) | 561, 1436 |
| BfmI | CTRYAG | 1 cut(s) | 1407 |
| BfuI | GTATCC | 1 cut(s) | 1573 |
| BisI | GCNGC | 4 cut(s) | 558, 1440, 1660, 1805 |
| BlsI | GCNGC | 4 cut(s) | 559, 1441, 1661, 1806 |
| BmcAI | AGTACT | 3 cut(s) | 410, 844, 1060 |
| Bme1390I | CCNGG | 2 cut(s) | 267, 945 |
| Bme18I | GGWCC | 4 cut(s) | 5, 169, 1076, 1725 |
| BmeT110I | CYCGRG | 1 cut(s) | 1671 |
| BmgT120I | GGNCC | 5 cut(s) | 5, 169, 1076, 1427, 1725 |
| BmiI | GGNNCC | 3 cut(s) | 6, 1429, 1497 |
| BmrFI | CCNGG | 2 cut(s) | 267, 945 |
| BmrI | ACTGGG | 1 cut(s) | 1918 |
| BmsI | GCATC | 6 cut(s) | 406, 529, 811, 1027, 1174, 1816 |
| BmuI | ACTGGG | 1 cut(s) | 1918 |
| BpiI | GAAGAC | 1 cut(s) | 1683 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 62, 94, 489, 521 |
| Bpu14I | TTCGAA | 1 cut(s) | 132 |
| BsaBI | GATNNNNATC | 4 cut(s) | 543, 825, 1041, 1188 |
| BsaHI | GRCGYC | 2 cut(s) | 193, 833 |
| BsaJI | CCNNGG | 3 cut(s) | 768, 1491, 1584 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 1922 |
| Bse1I | ACTGG | 3 cut(s) | 840, 1056, 1924 |
| Bse3DI | GCAATG | 4 cut(s) | 518, 1016, 1163, 1590 |
| Bse8I | GATNNNNATC | 4 cut(s) | 543, 825, 1041, 1188 |
| BseBI | CCWGG | 2 cut(s) | 267, 945 |
| BseDI | CCNNGG | 3 cut(s) | 768, 1491, 1584 |
| BseGI | GGATG | 3 cut(s) | 512, 778, 1243 |
| BseJI | GATNNNNATC | 4 cut(s) | 543, 825, 1041, 1188 |
| BseMI | GCAATG | 4 cut(s) | 518, 1016, 1163, 1590 |
| BseMII | CTCAG | 7 cut(s) | 104, 494, 899, 923, 1139, 1286, 1750 |
| BseNI | ACTGG | 3 cut(s) | 840, 1056, 1924 |
| BseRI | GAGGAG | 1 cut(s) | 754 |
| BseXI | GCAGC | 2 cut(s) | 1426, 1816 |
| BsgI | GTGCAG | 2 cut(s) | 1366, 1425 |
| Bsh1236I | CGCG | 1 cut(s) | 217 |
| BshFI | GGCC | 2 cut(s) | 1428, 1850 |
| BsiHKAI | GWGCWC | 1 cut(s) | 98 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1671 |
| BslFI | GGGAC | 2 cut(s) | 18, 1417 |
| BsmAI | GTCTC | 6 cut(s) | 483, 888, 1017, 1104, 1164, 1869 |
| BsmFI | GGGAC | 2 cut(s) | 18, 1417 |
| BsnI | GGCC | 2 cut(s) | 1428, 1850 |
| BsoBI | CYCGRG | 1 cut(s) | 1671 |
| Bsp119I | TTCGAA | 1 cut(s) | 132 |
| Bsp1286I | GDGCHC | 1 cut(s) | 98 |
| Bsp1407I | TGTACA | 2 cut(s) | 184, 958 |
| Bsp143I | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| BspACI | CCGC | 6 cut(s) | 215, 558, 659, 1526, 1659, 1829 |
| BspANI | GGCC | 2 cut(s) | 1428, 1850 |
| BspCNI | CTCAG | 7 cut(s) | 103, 493, 898, 922, 1138, 1285, 1749 |
| BspFNI | CGCG | 1 cut(s) | 217 |
| BspHI | TCATGA | 2 cut(s) | 196, 535 |
| BspLI | GGNNCC | 3 cut(s) | 6, 1429, 1497 |
| BspPI | GGATC | 5 cut(s) | 230, 1259, 1509, 1649, 1734 |
| BspQI | GCTCTTC | 3 cut(s) | 804, 1020, 1167 |
| BspT104I | TTCGAA | 1 cut(s) | 132 |
| BsrDI | GCAATG | 4 cut(s) | 518, 1016, 1163, 1590 |
| BsrGI | TGTACA | 2 cut(s) | 184, 958 |
| BsrI | ACTGG | 3 cut(s) | 840, 1056, 1924 |
| BssECI | CCNNGG | 3 cut(s) | 768, 1491, 1584 |
| BssMI | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| BssNI | GRCGYC | 2 cut(s) | 193, 833 |
| BssT1I | CCWWGG | 3 cut(s) | 768, 1491, 1584 |
| Bst2UI | CCWGG | 2 cut(s) | 267, 945 |
| Bst4CI | ACNGT | 7 cut(s) | 243, 413, 1262, 1408, 1630, 1656, 1700 |
| BstACI | GRCGYC | 2 cut(s) | 193, 833 |
| BstAUI | TGTACA | 2 cut(s) | 184, 958 |
| BstBI | TTCGAA | 1 cut(s) | 132 |
| BstC8I | GCNNGC | 1 cut(s) | 98 |
| BstF5I | GGATG | 3 cut(s) | 512, 778, 1243 |
| BstFNI | CGCG | 1 cut(s) | 217 |
| BstKTI | GATC | 8 cut(s) | 202, 238, 891, 1254, 1517, 1644, 1742, 1846 |
| BstMAI | GTCTC | 6 cut(s) | 483, 888, 1017, 1104, 1164, 1869 |
| BstMBI | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 811, 1027, 1174 |
| BstNI | CCWGG | 2 cut(s) | 267, 945 |
| BstNSI | RCATGY | 2 cut(s) | 275, 692 |
| BstSCI | CCNGG | 2 cut(s) | 265, 943 |
| BstSFI | CTRYAG | 1 cut(s) | 1407 |
| BstUI | CGCG | 1 cut(s) | 217 |
| BstV1I | GCAGC | 2 cut(s) | 1426, 1816 |
| BstV2I | GAAGAC | 1 cut(s) | 1683 |
| BstX2I | RGATCY | 2 cut(s) | 1514, 1739 |
| BstYI | RGATCY | 2 cut(s) | 1514, 1739 |
| BsuI | GTATCC | 1 cut(s) | 1573 |
| BsuRI | GGCC | 2 cut(s) | 1428, 1850 |
| BtsCI | GGATG | 3 cut(s) | 512, 778, 1243 |
| BtsI | GCAGTG | 1 cut(s) | 395 |
| BtsIMutI | CAGTG | 4 cut(s) | 395, 1635, 1705, 1931 |
| Cac8I | GCNNGC | 1 cut(s) | 98 |
| CciI | TCATGA | 2 cut(s) | 196, 535 |
| Cfr13I | GGNCC | 5 cut(s) | 5, 169, 1076, 1427, 1725 |
| Csp6I | GTAC | 6 cut(s) | 185, 409, 843, 959, 1059, 1819 |
| CviQI | GTAC | 6 cut(s) | 185, 409, 843, 959, 1059, 1819 |
| DpnI | GATC | 8 cut(s) | 201, 237, 890, 1253, 1516, 1643, 1741, 1845 |
| DpnII | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| EaeI | YGGCCR | 1 cut(s) | 1848 |
| Eco130I | CCWWGG | 3 cut(s) | 768, 1491, 1584 |
| Eco47I | GGWCC | 4 cut(s) | 5, 169, 1076, 1725 |
| Eco57I | CTGAAG | 1 cut(s) | 1158 |
| Eco88I | CYCGRG | 1 cut(s) | 1671 |
| EcoRI | GAATTC | 1 cut(s) | 751 |
| EcoRII | CCWGG | 2 cut(s) | 265, 943 |
| EcoT14I | CCWWGG | 3 cut(s) | 768, 1491, 1584 |
| ErhI | CCWWGG | 3 cut(s) | 768, 1491, 1584 |
| FaqI | GGGAC | 2 cut(s) | 18, 1417 |
| FauI | CCCGC | 1 cut(s) | 1822 |
| Fnu4HI | GCNGC | 4 cut(s) | 558, 1440, 1660, 1805 |
| FokI | GGATG | 3 cut(s) | 499, 785, 1250 |
| Fsp4HI | GCNGC | 4 cut(s) | 558, 1440, 1660, 1805 |
| FspBI | CTAG | 2 cut(s) | 561, 1436 |
| GluI | GCNGC | 4 cut(s) | 558, 1440, 1660, 1805 |
| HaeIII | GGCC | 2 cut(s) | 1428, 1850 |
| Hin1I | GRCGYC | 2 cut(s) | 193, 833 |
| HincII | GTYRAC | 2 cut(s) | 76, 837 |
| HindII | GTYRAC | 2 cut(s) | 76, 837 |
| Hpy166II | GTNNAC | 4 cut(s) | 76, 119, 837, 959 |
| Hpy188III | TCNNGA | 8 cut(s) | 197, 491, 536, 1499, 1535, 1671, 1673, 1747 |
| Hpy8I | GTNNAC | 4 cut(s) | 76, 119, 837, 959 |
| HpyAV | CCTTC | 5 cut(s) | 240, 657, 1067, 1753, 1786 |
| HpyCH4III | ACNGT | 7 cut(s) | 243, 413, 1262, 1408, 1630, 1656, 1700 |
| HpyCH4IV | ACGT | 4 cut(s) | 193, 833, 1566, 1764 |
| HpyCH4V | TGCA | 6 cut(s) | 164, 400, 1347, 1442, 1557, 1595 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 811, 1027, 1174 |
| HpySE526I | ACGT | 4 cut(s) | 193, 833, 1566, 1764 |
| Hsp92I | GRCGYC | 2 cut(s) | 193, 833 |
| Kzo9I | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| LguI | GCTCTTC | 3 cut(s) | 804, 1020, 1167 |
| LmnI | GCTCC | 1 cut(s) | 1930 |
| Lsp1109I | GCAGC | 2 cut(s) | 1426, 1816 |
| LweI | GCATC | 6 cut(s) | 406, 529, 811, 1027, 1174, 1816 |
| MaeI | CTAG | 2 cut(s) | 561, 1436 |
| MaeII | ACGT | 4 cut(s) | 193, 833, 1566, 1764 |
| MaeIII | GTNAC | 8 cut(s) | 243, 586, 716, 868, 1084, 1256, 1486, 1567 |
| MalI | GATC | 8 cut(s) | 201, 237, 890, 1253, 1516, 1643, 1741, 1845 |
| MboI | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| MflI | RGATCY | 2 cut(s) | 1514, 1739 |
| MhlI | GDGCHC | 1 cut(s) | 98 |
| MlsI | TGGCCA | 1 cut(s) | 1850 |
| MluCI | AATT | 9 cut(s) | 58, 346, 458, 625, 751, 914, 1130, 1230, 1552 |
| MluNI | TGGCCA | 1 cut(s) | 1850 |
| MlyI | GAGTC | 9 cut(s) | 71, 485, 498, 608, 890, 1106, 1253, 1871, 1880 |
| MmeI | TCCRAC | 1 cut(s) | 33 |
| Mox20I | TGGCCA | 1 cut(s) | 1850 |
| MroXI | GAANNNNTTC | 2 cut(s) | 708, 1837 |
| MscI | TGGCCA | 1 cut(s) | 1850 |
| MseI | TTAA | 9 cut(s) | 902, 1118, 1265, 1332, 1338, 1476, 1548, 1620, 1769 |
| MslI | CAYNNNNRTG | 6 cut(s) | 201, 661, 725, 1035, 1182, 1447 |
| Msp20I | TGGCCA | 1 cut(s) | 1850 |
| MspR9I | CCNGG | 2 cut(s) | 267, 945 |
| MvaI | CCWGG | 2 cut(s) | 267, 945 |
| MvnI | CGCG | 1 cut(s) | 217 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 811, 1027, 1174 |
| NdeII | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 1429, 1497 |
| NmuCI | GTSAC | 3 cut(s) | 243, 716, 1486 |
| NspI | RCATGY | 2 cut(s) | 275, 692 |
| NspV | TTCGAA | 1 cut(s) | 132 |
| OliI | CACNNNNGTG | 1 cut(s) | 1447 |
| PaeR7I | CTCGAG | 1 cut(s) | 1671 |
| PagI | TCATGA | 2 cut(s) | 196, 535 |
| PciI | ACATGT | 2 cut(s) | 271, 688 |
| PciSI | GCTCTTC | 3 cut(s) | 804, 1020, 1167 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 199 |
| PdmI | GAANNNNTTC | 2 cut(s) | 708, 1837 |
| PfoI | TCCNGGA | 1 cut(s) | 265 |
| PkrI | GCNGC | 4 cut(s) | 559, 1441, 1661, 1806 |
| PleI | GAGTC | 9 cut(s) | 71, 484, 498, 607, 889, 1105, 1252, 1870, 1880 |
| PpsI | GAGTC | 9 cut(s) | 71, 484, 498, 607, 889, 1105, 1252, 1870, 1880 |
| PscI | ACATGT | 2 cut(s) | 271, 688 |
| PshBI | ATTAAT | 1 cut(s) | 1548 |
| Psp6I | CCWGG | 2 cut(s) | 265, 943 |
| PspGI | CCWGG | 2 cut(s) | 265, 943 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 1429, 1497 |
| PspPI | GGNCC | 5 cut(s) | 5, 169, 1076, 1427, 1725 |
| PsuI | RGATCY | 2 cut(s) | 1514, 1739 |
| RsaI | GTAC | 6 cut(s) | 186, 410, 844, 960, 1060, 1820 |
| RsaNI | GTAC | 6 cut(s) | 185, 409, 843, 959, 1059, 1819 |
| RseI | CAYNNNNRTG | 6 cut(s) | 201, 661, 725, 1035, 1182, 1447 |
| SapI | GCTCTTC | 3 cut(s) | 804, 1020, 1167 |
| SaqAI | TTAA | 9 cut(s) | 902, 1118, 1265, 1332, 1338, 1476, 1548, 1620, 1769 |
| SatI | GCNGC | 4 cut(s) | 558, 1440, 1660, 1805 |
| Sau3AI | GATC | 8 cut(s) | 199, 235, 888, 1251, 1514, 1641, 1739, 1843 |
| Sau96I | GGNCC | 5 cut(s) | 5, 169, 1076, 1427, 1725 |
| ScaI | AGTACT | 3 cut(s) | 410, 844, 1060 |
| SchI | GAGTC | 9 cut(s) | 71, 485, 498, 608, 890, 1106, 1253, 1871, 1880 |
| ScrFI | CCNGG | 2 cut(s) | 267, 945 |
| SduI | GDGCHC | 1 cut(s) | 98 |
| SfaNI | GCATC | 6 cut(s) | 406, 529, 811, 1027, 1174, 1816 |
| SfcI | CTRYAG | 1 cut(s) | 1407 |
| Sfr274I | CTCGAG | 1 cut(s) | 1671 |
| SfuI | TTCGAA | 1 cut(s) | 132 |
| SinI | GGWCC | 4 cut(s) | 5, 169, 1076, 1725 |
| SlaI | CTCGAG | 1 cut(s) | 1671 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 201, 661, 725, 1035, 1182, 1447 |
| SmlI | CTYRAG | 1 cut(s) | 1671 |
| SmoI | CTYRAG | 1 cut(s) | 1671 |
| Sse9I | AATT | 9 cut(s) | 58, 346, 458, 625, 751, 914, 1130, 1230, 1552 |
| SsiI | CCGC | 6 cut(s) | 215, 558, 659, 1526, 1659, 1829 |
| SspMI | CTAG | 2 cut(s) | 561, 1436 |
| StyD4I | CCNGG | 2 cut(s) | 265, 943 |
| StyI | CCWWGG | 3 cut(s) | 768, 1491, 1584 |
| TaaI | ACNGT | 7 cut(s) | 243, 413, 1262, 1408, 1630, 1656, 1700 |
| TaiI | ACGT | 4 cut(s) | 196, 836, 1569, 1767 |
| TaqI | TCGA | 4 cut(s) | 132, 1023, 1170, 1672 |
| TasI | AATT | 9 cut(s) | 58, 346, 458, 625, 751, 914, 1130, 1230, 1552 |
| TatI | WGTACW | 5 cut(s) | 184, 408, 842, 958, 1058 |
| TauI | GCSGC | 2 cut(s) | 560, 1662 |
| Tru1I | TTAA | 9 cut(s) | 902, 1118, 1265, 1332, 1338, 1476, 1548, 1620, 1769 |
| Tru9I | TTAA | 9 cut(s) | 902, 1118, 1265, 1332, 1338, 1476, 1548, 1620, 1769 |
| TscAI | CASTG | 4 cut(s) | 402, 1635, 1705, 1931 |
| TseFI | GTSAC | 3 cut(s) | 243, 716, 1486 |
| TseI | GCWGC | 2 cut(s) | 1439, 1804 |
| Tsp45I | GTSAC | 3 cut(s) | 243, 716, 1486 |
| TspDTI | ATGAA | 9 cut(s) | 339, 417, 465, 486, 588, 744, 1233, 1518, 1706 |
| TspGWI | ACGGA | 4 cut(s) | 759, 789, 1250, 1836 |
| TspRI | CASTG | 4 cut(s) | 402, 1635, 1705, 1931 |
| VpaK11BI | GGWCC | 4 cut(s) | 5, 169, 1076, 1725 |
| VspI | ATTAAT | 1 cut(s) | 1548 |
| XapI | RAATTY | 4 cut(s) | 58, 751, 914, 1130 |
| XceI | RCATGY | 2 cut(s) | 275, 692 |
| XhoI | CTCGAG | 1 cut(s) | 1671 |
| XmnI | GAANNNNTTC | 2 cut(s) | 708, 1837 |
| XspI | CTAG | 2 cut(s) | 561, 1436 |
| ZraI | GACGTC | 2 cut(s) | 194, 834 |
| ZrmI | AGTACT | 3 cut(s) | 410, 844, 1060 |