Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003192

Physical Location & Seq

Genomic Coordinates Forward (+)

25750608 .. 25756718

Gene Structure 6111 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG218800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGATGGATTTAAAATTCAAAGGTCCAAAATGGGTCGGAAACATTTACCAGAAGTTTGAAGCAATCTGCCATGAGGTGGATGATATTGTAAAACAGGATACAATTAAATATGTGGAAAACCAGATGCATTCAGTGGGTAAAAATGTGAAGAAACTCTGTTCTGATTTACTTCCTCCTTTAGGGCATCCTGTCAAACATGTGGCTGAAGTTGTGGTTATTGAAAAGAATGCTACTGTTAGTACTAAGACAACGAAAAGCTTTCAGGAAAAGTCTGTTGATGCAACTGAAAAACAATCATCTACAGAGCCCAATATAATAGATCCTGTGACAAGCCAGCCGAGTCTTGCCTCAAGTGAACATCACCTTGGGGACCAACTTAGTTCTCTAACTTCTATGGATACTCTTGAGGAGTCAGACTCCAACTTAAGCATAGGAAAGGTTGACGACATTCTGACAAATGAAAACTCGGCCGTGGACAAACCAATTCTGTCAAAGTTAACTTCTCCTGGTGGTGAAGAACATATTGCAGAGTCATCAGTTCATAGTAAATATGAAAACAGACAGGCAGATTTTTCTGAGGTTGAAACCTCCACTGATGAATTGGAGCAAAAATCAAGGCGTGATAACTTTTCTGCTGAAGTTGAGTGTGTGTCTGGTGTTTCAACTGTAATGGTCTCCAATATGGAGCCCAAAGTAATTGATCCAGAAAACCAGCTGAATCTTGTCTCTTGCCAATCTCACCTTTTAGAGCAACTCAGTTCTCCGACTTCCATGGATACTCTTGAAGGCTCAGAGTCAATCTTATGCATGGGAAAAATTGATGGCAATTTGACAAATGAAAACTCAGATGCGAACAAAGAAGAATTTTCCACAAAGGAGTATGCACCTATATTGCTGGAGTCAACCTCTTCCGGTGTGGTAGAACACATTACGATGTCATCAATTGGGGTATCTGATCAAAGAAATGATGAAAATAAACATGCTGTTTTGTCTACGTTTGGACCTGAAACCCCAGTACATGAAGGGGAGTTTGAATCTCTGCAAAACTGGACCCTTTGGGATGACTATGTTGATGAAATTGAATGCGTTTCTGGTGCTTTGAATTCCACTTCTGAAATGTCCTTTTCAGTTGTCTCTGCGGAGAATACTACAGAGGATGTTGGACTTGCATCCTTCAGCAGATCCAATGCAAAGGAATCTCTTAGGATCTCTGAAAATTCACCTGAAAAGTTAACCCAGGAAGCAATGTTTTGTCATAACTCTGTTGAGGGGGTCAGTTTTGTCTCTAATTTATCTGATGTTGCGCATGAAACCTCAGCACATAGTTTGGAGTTTGAATCTCAGCTAAACTCGACTGCTTGGGATAGCTTTGCTAATGAAACTGAGTGTAATTCTGGTGGTTCAAATACAACTTCTGAAATGGTCTCCTCAGGGGAGAATTCTATAGAGGAGGTTGGCTTAACATCCTTCAACTGCTCCAATGCTAAACCACTACGGGTCTCTGAGGATTCACCTCAAAAGTTATCCACAGAAGCAATGTTATGTCCTAATTCTAGTGAGGTGGCTGGTTGTGTTTGTGATATGTCTGAGGTTGTACATGACAATTCAGCACATGGCGTGGAGTCTGAATTCCAGCTAAGCTCGCCAGCTTGGGATGAGTTTTCTGATGATATCCAATGTGTTTGTGGTGCTTCAAAAGATACTTCTGAAGTAGCCTGTTCAGCTGTCCCTGGAGAGAATGCTGCAGCGGAGATTGGACTTCCGTCCTTCGGCAGTTCCAATGCAAAGGAATTTCTTAAGTTCACTGAAAATTCACCTCAAATGTCATCTGTGGAAGTCATGTTTTGTCATAGTTCTGGTGGCTACGCTAGATGTGTTTCTGATAGCTCGGATGGAATCTCATCATCAGCTCCAGCCCTAACTGTGTCCAGTAAGACTAAGGACACTGAAGTTCGACTCTCTTCATTCAGCAGTGTGCTATCGATTGAAGAAGGCACTTCCAGAATCACAGAGACCATGCCTCTGACAGTACCTTCTGGAAAACAGCAAGTCAAGATCTGCGAGTCCGTTCAACATGAGGCTGTAGTGTCCTCTGCAGATACTGGATGTTTGGATGAATCAAGTTCTGATATTGCTTACTGTCACATGGAAAGCATTGATTTGCATGATAAGGTGAAGATTGAGGAAAGCTGTGTCAATGTAGAGGATAGTGTACTTCATGCTATTTCTCAGAGAGCAAGAAAGCAAAGATCATACAAGAAACAAATCCAGGATGCTTTTACATCAAAGAAGAGGTTGGTGAAGGAGTATGAACAGCTAGCGATTTGGTTTGGAGATACTGGTTTAGATTCCAGCCAAGAAGCAACTTCTAACAAGGAAAATTCGGGAACTCATCATGCTGGCGACTCTGAATGGGAGCTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

808

Amino Acids

87.74

Weight (kDa)

4.51

Isoelectric Point (pI)

53.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT2G16575
fragaria_vesca	FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g25880
malus_domestica	MD03G1240400.v1.1 MD11G1259700.v1.1
prunus_persica	Prupe.4G170200_v2.0.a1 Prupe.4G170200_v2.0.a1
pyrus_communis	pycom03g18560 pycom11g22940
rosa_chinensis	RchiOBHm_Chr5g0031461
rosa_laevigata	RLG00000002875 RLG00000029120 RLG00000033309
rosa_multiflora	Rmu_sc0000404.1_g000002
rosa_roxburghii	Rroxscaffold_176G00431450 Rroxscaffold_1G00048870 Rroxscaffold_6G00411210
rosa_rugosa	Rorug05G0126000
rosa_samantha	Rh5AG218800 Rh5BG218100 Rh5CG241800 Rh5DG223400
rosa_wichuraiana	Rw5G019960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1305
AccB7I	CCANNNNNTGG	1 cut(s)	76
AccI	GTMKAC	1 cut(s)	992
AciI	CCGC	2 cut(s)	1139, 1748
AclWI	GGATC	4 cut(s)	314, 695, 1176, 1214
AcoI	YGGCCR	1 cut(s)	468
AcsI	RAATTY	9 cut(s)	14, 863, 1102, 1216, 1438, 1628, 1790, 1810, 2380
AcuI	CTGAAG	5 cut(s)	225, 657, 1159, 1728, 1968
AfaI	GTAC	5 cut(s)	241, 1017, 1596, 2031, 2214
AfiI	CCNNNNNNNGG	3 cut(s)	76, 179, 1769
AflII	CTTAAG	2 cut(s)	424, 1796
AflIII	ACRYGT	1 cut(s)	196
AjnI	CCWGG	4 cut(s)	505, 1236, 1729, 2268
AjuI	GAANNNNNNNTTGG	2 cut(s)	348, 380
Alw26I	GTCTC	7 cut(s)	679, 730, 1138, 1288, 1429, 1504, 2006
AlwI	GGATC	4 cut(s)	314, 695, 1176, 1214
AlwNI	CAGNNNCTG	1 cut(s)	2102
AoxI	GGCC	1 cut(s)	468
ApeKI	GCWGC	2 cut(s)	1742, 1745
ApoI	RAATTY	9 cut(s)	14, 863, 1102, 1216, 1438, 1628, 1790, 1810, 2380
AspLEI	GCGC	1 cut(s)	1306
AspS9I	GGNCC	4 cut(s)	23, 370, 1001, 1050
AsuHPI	GGTGA	8 cut(s)	353, 524, 731, 1212, 1503, 1806, 2185, 2311
AsuNHI	GCTAGC	1 cut(s)	2317
AvaII	GGWCC	4 cut(s)	23, 370, 1001, 1050
AxyI	CCTNAGG	1 cut(s)	1429
BanII	GRGCYC	2 cut(s)	309, 690
BbvCI	CCTCAGC	1 cut(s)	1315
BbvI	GCAGC	2 cut(s)	1729, 1757
BccI	CCATC	2 cut(s)	815, 1886
BceAI	ACGGC	1 cut(s)	455
BciT130I	CCWGG	4 cut(s)	507, 1238, 1731, 2270
BciVI	GTATCC	3 cut(s)	91, 391, 769
BclI	TGATCA	1 cut(s)	955
BcoDI	GTCTC	7 cut(s)	679, 730, 1138, 1288, 1429, 1504, 2006
BfaI	CTAG	3 cut(s)	1554, 1869, 2318
BfmI	CTRYAG	6 cut(s)	300, 1149, 1443, 1743, 2082, 2094
BfrI	CTTAAG	2 cut(s)	424, 1796
BfuI	GTATCC	3 cut(s)	91, 391, 769
BglII	AGATCT	1 cut(s)	2055
BisI	GCNGC	2 cut(s)	1743, 1746
BlpI	GCTNAGC	1 cut(s)	1637
BlsI	GCNGC	2 cut(s)	1744, 1747
BmcAI	AGTACT	1 cut(s)	241
Bme1390I	CCNGG	4 cut(s)	507, 1238, 1731, 2270
Bme18I	GGWCC	4 cut(s)	23, 370, 1001, 1050
BmgT120I	GGNCC	4 cut(s)	23, 370, 1001, 1050
BmiI	GGNNCC	3 cut(s)	371, 687, 1052
BmrFI	CCNGG	4 cut(s)	507, 1238, 1731, 2270
BmrI	ACTGGG	1 cut(s)	1007
BmsI	GCATC	6 cut(s)	114, 193, 268, 838, 1178, 2263
BmtI	GCTAGC	1 cut(s)	2321
BmuI	ACTGGG	1 cut(s)	1007
BoxI	GACNNNNGTC	1 cut(s)	1762
BplI	GAGNNNNNCTC	4 cut(s)	401, 433, 890, 922
BpmI	CTGGAG	3 cut(s)	917, 1752, 1896
Bpu10I	CCTNAGC	1 cut(s)	1315
Bpu1102I	GCTNAGC	1 cut(s)	1637
BpuEI	CTTGAG	2 cut(s)	334, 425
Bsa29I	ATCGAT	1 cut(s)	1982
BsaI	GGTCTC	4 cut(s)	679, 1429, 1504, 2006
BsaJI	CCNNGG	5 cut(s)	364, 471, 771, 1236, 1729
BsaWI	WCCGGW	1 cut(s)	911
BsaXI	ACNNNNNCTCC	1 cut(s)	2408
Bsc4I	CCNNNNNNNGG	3 cut(s)	76, 179, 1769
Bse1I	ACTGG	5 cut(s)	1013, 1052, 1929, 2107, 2344
Bse21I	CCTNAGG	1 cut(s)	1429
Bse3DI	GCAATG	2 cut(s)	1251, 1542
BseBI	CCWGG	4 cut(s)	507, 1238, 1731, 2270
BseCI	ATCGAT	1 cut(s)	1982
BseDI	CCNNGG	5 cut(s)	364, 471, 771, 1236, 1729
BseLI	CCNNNNNNNGG	3 cut(s)	76, 179, 1769
BseMI	GCAATG	2 cut(s)	1251, 1542
BseNI	ACTGG	5 cut(s)	1013, 1052, 1929, 2107, 2344
BseRI	GAGGAG	3 cut(s)	422, 1417, 1463
BseX3I	CGGCCG	1 cut(s)	468
BseXI	GCAGC	2 cut(s)	1729, 1757
Bsh1285I	CGRYCG	1 cut(s)	471
BshFI	GGCC	1 cut(s)	470
BshVI	ATCGAT	1 cut(s)	1982
BsiEI	CGRYCG	1 cut(s)	471
BsiSI	CCGG	1 cut(s)	912
BslFI	GGGAC	2 cut(s)	383, 1712
BslI	CCNNNNNNNGG	3 cut(s)	76, 179, 1769
BsmAI	GTCTC	7 cut(s)	679, 730, 1138, 1288, 1429, 1504, 2006
BsmFI	GGGAC	2 cut(s)	383, 1712
BsmI	GAATGC	4 cut(s)	127, 232, 1088, 1744
BsnI	GGCC	1 cut(s)	470
Bso31I	GGTCTC	4 cut(s)	679, 1429, 1504, 2006
Bsp1286I	GDGCHC	2 cut(s)	309, 690
Bsp1407I	TGTACA	1 cut(s)	1594
Bsp143I	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
Bsp1720I	GCTNAGC	1 cut(s)	1637
Bsp19I	CCATGG	1 cut(s)	771
BspACI	CCGC	2 cut(s)	1139, 1748
BspANI	GGCC	1 cut(s)	470
BspDI	ATCGAT	1 cut(s)	1982
BspLI	GGNNCC	3 cut(s)	371, 687, 1052
BspMAI	CTGCAG	2 cut(s)	1747, 2098
BspOI	GCTAGC	1 cut(s)	2321
BspPI	GGATC	4 cut(s)	314, 695, 1176, 1214
BspTI	CTTAAG	2 cut(s)	424, 1796
BspTNI	GGTCTC	4 cut(s)	679, 1429, 1504, 2006
BsrDI	GCAATG	2 cut(s)	1251, 1542
BsrGI	TGTACA	1 cut(s)	1594
BsrI	ACTGG	5 cut(s)	1013, 1052, 1929, 2107, 2344
BssECI	CCNNGG	5 cut(s)	364, 471, 771, 1236, 1729
BssMI	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
BssT1I	CCWWGG	2 cut(s)	364, 771
Bst2UI	CCWGG	4 cut(s)	507, 1238, 1731, 2270
Bst4CI	ACNGT	5 cut(s)	235, 667, 1924, 2029, 2141
Bst6I	CTCTTC	3 cut(s)	913, 1966, 2285
BstAFI	CTTAAG	2 cut(s)	424, 1796
BstAUI	TGTACA	1 cut(s)	1594
BstC8I	GCNNGC	5 cut(s)	335, 1643, 1647, 2319, 2401
BstDSI	CCRYGG	2 cut(s)	471, 771
BstENI	CCTNNNNNAGG	1 cut(s)	177
BstHHI	GCGC	1 cut(s)	1306
BstKTI	GATC	7 cut(s)	322, 703, 958, 1184, 1209, 2058, 2252
BstMAI	GTCTC	7 cut(s)	679, 730, 1138, 1288, 1429, 1504, 2006
BstMBI	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
BstMCI	CGRYCG	1 cut(s)	471
BstMWI	GCNNNNNNNGC	2 cut(s)	1642, 1721
BstNI	CCWGG	4 cut(s)	507, 1238, 1731, 2270
BstNSI	RCATGY	2 cut(s)	200, 983
BstPAI	GACNNNNGTC	1 cut(s)	1762
BstSCI	CCNGG	4 cut(s)	505, 1236, 1729, 2268
BstSFI	CTRYAG	6 cut(s)	300, 1149, 1443, 1743, 2082, 2094
BstV1I	GCAGC	2 cut(s)	1729, 1757
BstX2I	RGATCY	4 cut(s)	319, 1181, 1206, 2055
BstYI	RGATCY	4 cut(s)	319, 1181, 1206, 2055
BstZI	CGGCCG	1 cut(s)	468
Bsu15I	ATCGAT	1 cut(s)	1982
Bsu36I	CCTNAGG	1 cut(s)	1429
BsuI	GTATCC	3 cut(s)	91, 391, 769
BsuRI	GGCC	1 cut(s)	470
BsuTUI	ATCGAT	1 cut(s)	1982
BtgI	CCRYGG	2 cut(s)	471, 771
BtsI	GCAGTG	1 cut(s)	1978
BtsIMutI	CAGTG	5 cut(s)	138, 591, 1803, 1944, 1978
Cac8I	GCNNGC	5 cut(s)	335, 1643, 1647, 2319, 2401
CaiI	CAGNNNCTG	1 cut(s)	2102
CfoI	GCGC	1 cut(s)	1306
Cfr13I	GGNCC	4 cut(s)	23, 370, 1001, 1050
ClaI	ATCGAT	1 cut(s)	1982
Csp6I	GTAC	5 cut(s)	240, 1016, 1595, 2030, 2213
CviQI	GTAC	5 cut(s)	240, 1016, 1595, 2030, 2213
DpnI	GATC	7 cut(s)	321, 702, 957, 1183, 1208, 2057, 2251
DpnII	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
DraI	TTTAAA	1 cut(s)	12
EaeI	YGGCCR	1 cut(s)	468
EagI	CGGCCG	1 cut(s)	468
Eam1104I	CTCTTC	3 cut(s)	913, 1966, 2285
EarI	CTCTTC	3 cut(s)	913, 1966, 2285
EclXI	CGGCCG	1 cut(s)	468
Eco130I	CCWWGG	2 cut(s)	364, 771
Eco24I	GRGCYC	2 cut(s)	309, 690
Eco31I	GGTCTC	4 cut(s)	679, 1429, 1504, 2006
Eco32I	GATATC	1 cut(s)	1672
Eco47I	GGWCC	4 cut(s)	23, 370, 1001, 1050
Eco52I	CGGCCG	1 cut(s)	468
Eco57I	CTGAAG	5 cut(s)	225, 657, 1159, 1728, 1968
Eco81I	CCTNAGG	1 cut(s)	1429
EcoNI	CCTNNNNNAGG	1 cut(s)	177
EcoRI	GAATTC	3 cut(s)	1102, 1438, 1628
EcoRII	CCWGG	4 cut(s)	505, 1236, 1729, 2268
EcoRV	GATATC	1 cut(s)	1672
EcoT14I	CCWWGG	2 cut(s)	364, 771
EcoT22I	ATGCAT	2 cut(s)	129, 809
EcoT38I	GRGCYC	2 cut(s)	309, 690
ErhI	CCWWGG	2 cut(s)	364, 771
FaqI	GGGAC	2 cut(s)	383, 1712
FbaI	TGATCA	1 cut(s)	955
FblI	GTMKAC	1 cut(s)	992
Fnu4HI	GCNGC	2 cut(s)	1743, 1746
FriOI	GRGCYC	2 cut(s)	309, 690
Fsp4HI	GCNGC	2 cut(s)	1743, 1746
FspBI	CTAG	3 cut(s)	1554, 1869, 2318
FspI	TGCGCA	1 cut(s)	1305
GlaI	GCGC	1 cut(s)	1305
GluI	GCNGC	2 cut(s)	1743, 1746
GsuI	CTGGAG	3 cut(s)	917, 1752, 1896
HaeIII	GGCC	1 cut(s)	470
HapII	CCGG	1 cut(s)	912
HhaI	GCGC	1 cut(s)	1306
Hin6I	GCGC	1 cut(s)	1304
HinP1I	GCGC	1 cut(s)	1304
HincII	GTYRAC	4 cut(s)	442, 498, 903, 1233
HindII	GTYRAC	4 cut(s)	442, 498, 903, 1233
HindIII	AAGCTT	1 cut(s)	256
HpaI	GTTAAC	2 cut(s)	498, 1233
HpaII	CCGG	1 cut(s)	912
HphI	GGTGA	8 cut(s)	353, 524, 731, 1212, 1503, 1806, 2185, 2311
Hpy166II	GTNNAC	9 cut(s)	356, 442, 475, 498, 903, 993, 1233, 1803, 2213
Hpy188III	TCNNGA	8 cut(s)	263, 404, 704, 782, 2001, 2037, 2053, 2385
Hpy8I	GTNNAC	9 cut(s)	356, 442, 475, 498, 903, 993, 1233, 1803, 2213
HpyAV	CCTTC	8 cut(s)	779, 1016, 1183, 1477, 1777, 1985, 2043, 2296
HpyCH4III	ACNGT	5 cut(s)	235, 667, 1924, 2029, 2141
HpyCH4IV	ACGT	1 cut(s)	995
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1642, 1721
HpySE526I	ACGT	1 cut(s)	995
HspAI	GCGC	1 cut(s)	1304
Ksp22I	TGATCA	1 cut(s)	955
KspAI	GTTAAC	2 cut(s)	498, 1233
Kzo9I	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
LmnI	GCTCC	5 cut(s)	604, 685, 1481, 1915, 2416
Lsp1109I	GCAGC	2 cut(s)	1729, 1757
LweI	GCATC	6 cut(s)	114, 193, 268, 838, 1178, 2263
MaeI	CTAG	3 cut(s)	1554, 1869, 2318
MaeII	ACGT	1 cut(s)	995
MaeIII	GTNAC	2 cut(s)	325, 2141
MalI	GATC	7 cut(s)	321, 702, 957, 1183, 1208, 2057, 2251
MboI	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
MboII	GAAGA	8 cut(s)	160, 527, 872, 900, 1953, 2000, 2188, 2302
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	4 cut(s)	319, 1181, 1206, 2055
MhlI	GDGCHC	2 cut(s)	309, 690
MmeI	TCCRAC	4 cut(s)	16, 444, 788, 1141
Mph1103I	ATGCAT	2 cut(s)	129, 809
MseI	TTAA	7 cut(s)	11, 105, 425, 497, 1232, 1460, 1797
MslI	CAYNNNNRTG	1 cut(s)	932
MspA1I	CMGCKG	3 cut(s)	715, 1724, 1748
MspCI	CTTAAG	2 cut(s)	424, 1796
MspI	CCGG	1 cut(s)	912
MspR9I	CCNGG	4 cut(s)	507, 1238, 1731, 2270
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	4 cut(s)	127, 232, 1088, 1744
MvaI	CCWGG	4 cut(s)	507, 1238, 1731, 2270
MwoI	GCNNNNNNNGC	2 cut(s)	1642, 1721
NcoI	CCATGG	1 cut(s)	771
NdeII	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
NheI	GCTAGC	1 cut(s)	2317
NlaIV	GGNNCC	3 cut(s)	371, 687, 1052
NmeAIII	GCCGAG	2 cut(s)	363, 446
NmuCI	GTSAC	2 cut(s)	325, 2141
NsbI	TGCGCA	1 cut(s)	1305
NsiI	ATGCAT	2 cut(s)	129, 809
NspI	RCATGY	2 cut(s)	200, 983
PciI	ACATGT	1 cut(s)	196
PctI	GAATGC	4 cut(s)	127, 232, 1088, 1744
PfeI	GAWTC	9 cut(s)	718, 1034, 1196, 1337, 1508, 1896, 2004, 2117, 2348
PflMI	CCANNNNNTGG	1 cut(s)	76
PfoI	TCCNGGA	1 cut(s)	2268
PkrI	GCNGC	2 cut(s)	1744, 1747
PscI	ACATGT	1 cut(s)	196
PshAI	GACNNNNGTC	1 cut(s)	1762
Psp6I	CCWGG	4 cut(s)	505, 1236, 1729, 2268
PspGI	CCWGG	4 cut(s)	505, 1236, 1729, 2268
PspN4I	GGNNCC	3 cut(s)	371, 687, 1052
PspPI	GGNCC	4 cut(s)	23, 370, 1001, 1050
PstI	CTGCAG	2 cut(s)	1747, 2098
PstNI	CAGNNNCTG	1 cut(s)	2102
PsuI	RGATCY	4 cut(s)	319, 1181, 1206, 2055
PvuII	CAGCTG	2 cut(s)	715, 1724
RsaI	GTAC	5 cut(s)	241, 1017, 1596, 2031, 2214
RsaNI	GTAC	5 cut(s)	240, 1016, 1595, 2030, 2213
RseI	CAYNNNNRTG	1 cut(s)	932
SaqAI	TTAA	7 cut(s)	11, 105, 425, 497, 1232, 1460, 1797
SatI	GCNGC	2 cut(s)	1743, 1746
Sau3AI	GATC	7 cut(s)	319, 700, 955, 1181, 1206, 2055, 2249
Sau96I	GGNCC	4 cut(s)	23, 370, 1001, 1050
ScaI	AGTACT	1 cut(s)	241
ScrFI	CCNGG	4 cut(s)	507, 1238, 1731, 2270
SduI	GDGCHC	2 cut(s)	309, 690
SfaNI	GCATC	6 cut(s)	114, 193, 268, 838, 1178, 2263
SfcI	CTRYAG	6 cut(s)	300, 1149, 1443, 1743, 2082, 2094
SinI	GGWCC	4 cut(s)	23, 370, 1001, 1050
SmiMI	CAYNNNNRTG	1 cut(s)	932
SmlI	CTYRAG	4 cut(s)	349, 404, 424, 1796
SmoI	CTYRAG	4 cut(s)	349, 404, 424, 1796
SsiI	CCGC	2 cut(s)	1139, 1748
SspMI	CTAG	3 cut(s)	1554, 1869, 2318
StyD4I	CCNGG	4 cut(s)	505, 1236, 1729, 2268
StyI	CCWWGG	2 cut(s)	364, 771
TaaI	ACNGT	5 cut(s)	235, 667, 1924, 2029, 2141
TaiI	ACGT	1 cut(s)	998
TaqI	TCGA	3 cut(s)	1352, 1954, 1982
TatI	WGTACW	4 cut(s)	239, 1015, 1594, 2212
TfiI	GAWTC	9 cut(s)	718, 1034, 1196, 1337, 1508, 1896, 2004, 2117, 2348
Tru1I	TTAA	7 cut(s)	11, 105, 425, 497, 1232, 1460, 1797
Tru9I	TTAA	7 cut(s)	11, 105, 425, 497, 1232, 1460, 1797
TscAI	CASTG	5 cut(s)	138, 598, 1810, 1951, 1978
TseFI	GTSAC	2 cut(s)	325, 2141
TseI	GCWGC	2 cut(s)	1742, 1745
Tsp45I	GTSAC	2 cut(s)	325, 2141
TspGWI	ACGGA	2 cut(s)	1752, 2056
TspRI	CASTG	5 cut(s)	138, 598, 1810, 1951, 1978
Van91I	CCANNNNNTGG	1 cut(s)	76
Vha464I	CTTAAG	2 cut(s)	424, 1796
VpaK11BI	GGWCC	4 cut(s)	23, 370, 1001, 1050
XagI	CCTNNNNNAGG	1 cut(s)	177
XapI	RAATTY	9 cut(s)	14, 863, 1102, 1216, 1438, 1628, 1790, 1810, 2380
XceI	RCATGY	2 cut(s)	200, 983
XcmI	CCANNNNNNNNNTGG	2 cut(s)	598, 1682
XmiI	GTMKAC	1 cut(s)	992
XspI	CTAG	3 cut(s)	1554, 1869, 2318
ZrmI	AGTACT	1 cut(s)	241
Zsp2I	ATGCAT	2 cut(s)	129, 809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.