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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT2G16575 |
| fragaria_vesca | FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g25880 |
| malus_domestica | MD03G1240400.v1.1 MD11G1259700.v1.1 |
| prunus_persica | Prupe.4G170200_v2.0.a1 Prupe.4G170200_v2.0.a1 |
| pyrus_communis | pycom03g18560 pycom11g22940 |
| rosa_chinensis | RchiOBHm_Chr5g0031461 |
| rosa_laevigata | RLG00000002875 RLG00000029120 RLG00000033309 |
| rosa_multiflora | Rmu_sc0000404.1_g000002 |
| rosa_roxburghii | Rroxscaffold_176G00431450 Rroxscaffold_1G00048870 Rroxscaffold_6G00411210 |
| rosa_rugosa | Rorug05G0126000 |
| rosa_samantha | Rh5AG218800 Rh5BG218100 Rh5CG241800 Rh5DG223400 |
| rosa_wichuraiana | Rw5G019960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1351 |
| Acc36I | ACCTGC | 2 cut(s) | 1076, 1351 |
| AccB1I | GGYRCC | 1 cut(s) | 1617 |
| AciI | CCGC | 2 cut(s) | 67, 77 |
| AclWI | GGATC | 5 cut(s) | 284, 297, 678, 855, 1037 |
| AcsI | RAATTY | 5 cut(s) | 53, 152, 238, 991, 1154 |
| AcuI | CTGAAG | 1 cut(s) | 1051 |
| AfaI | GTAC | 4 cut(s) | 1438, 1761, 1944, 2078 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 73, 76, 1284, 1285, 1939 |
| AflII | CTTAAG | 2 cut(s) | 755, 1814 |
| AjnI | CCWGG | 5 cut(s) | 69, 120, 268, 1569, 2037 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 162, 194 |
| AleI | CACNNNNGTG | 1 cut(s) | 1032 |
| Alw26I | GTCTC | 5 cut(s) | 322, 508, 703, 1999, 2097 |
| AlwI | GGATC | 5 cut(s) | 284, 297, 678, 855, 1037 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1136 |
| ApeKI | GCWGC | 2 cut(s) | 917, 2188 |
| ApoI | RAATTY | 5 cut(s) | 53, 152, 238, 991, 1154 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 410, 442 |
| AsuHPI | GGTGA | 9 cut(s) | 258, 509, 577, 639, 704, 1524, 1592, 1664, 1695 |
| AsuNHI | GCTAGC | 1 cut(s) | 2086 |
| AxyI | CCTNAGG | 2 cut(s) | 1122, 1332 |
| BaeGI | GKGCMC | 1 cut(s) | 1620 |
| BamHI | GGATCC | 1 cut(s) | 289 |
| BanI | GGYRCC | 1 cut(s) | 1617 |
| BanII | GRGCYC | 3 cut(s) | 279, 465, 837 |
| BbvI | GCAGC | 2 cut(s) | 904, 2175 |
| BccI | CCATC | 5 cut(s) | 74, 628, 1630, 1771, 1892 |
| BceAI | ACGGC | 1 cut(s) | 1804 |
| BciT130I | CCWGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| BciVI | GTATCC | 2 cut(s) | 742, 919 |
| BcoDI | GTCTC | 5 cut(s) | 322, 508, 703, 1999, 2097 |
| BfaI | CTAG | 9 cut(s) | 507, 534, 702, 729, 906, 1095, 1767, 1998, 2087 |
| BfmI | CTRYAG | 3 cut(s) | 456, 918, 1737 |
| BfrI | CTTAAG | 2 cut(s) | 755, 1814 |
| BfuAI | ACCTGC | 2 cut(s) | 1076, 1351 |
| BfuI | GTATCC | 2 cut(s) | 742, 919 |
| BisI | GCNGC | 2 cut(s) | 918, 2189 |
| BlsI | GCNGC | 2 cut(s) | 919, 2190 |
| BmcAI | AGTACT | 1 cut(s) | 1438 |
| Bme1390I | CCNGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| BmiI | GGNNCC | 4 cut(s) | 291, 834, 1149, 1619 |
| BmrFI | CCNGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| BmrI | ACTGGG | 3 cut(s) | 1026, 1623, 2191 |
| BmsI | GCATC | 6 cut(s) | 619, 991, 1511, 1798, 2032, 2155 |
| BmtI | GCTAGC | 1 cut(s) | 2090 |
| BmuI | ACTGGG | 3 cut(s) | 1026, 1623, 2191 |
| BoxI | GACNNNNGTC | 1 cut(s) | 500 |
| BpmI | CTGGAG | 5 cut(s) | 291, 462, 1086, 1931, 1970 |
| BpuEI | CTTGAG | 2 cut(s) | 392, 953 |
| Bsa29I | ATCGAT | 2 cut(s) | 402, 1887 |
| BsaI | GGTCTC | 1 cut(s) | 322 |
| BsaJI | CCNNGG | 2 cut(s) | 1535, 1569 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 2177 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 73, 76, 1284, 1285, 1939 |
| Bse1I | ACTGG | 5 cut(s) | 479, 685, 1032, 1618, 2186 |
| Bse21I | CCTNAGG | 2 cut(s) | 1122, 1332 |
| Bse3DI | GCAATG | 1 cut(s) | 672 |
| BseBI | CCWGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| BseCI | ATCGAT | 2 cut(s) | 402, 1887 |
| BseDI | CCNNGG | 2 cut(s) | 1535, 1569 |
| BseGI | GGATG | 5 cut(s) | 85, 253, 1411, 1502, 2047 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 73, 76, 1284, 1285, 1939 |
| BseMI | GCAATG | 1 cut(s) | 672 |
| BseMII | CTCAG | 6 cut(s) | 299, 857, 939, 1113, 1323, 1404 |
| BseNI | ACTGG | 5 cut(s) | 479, 685, 1032, 1618, 2186 |
| BseRI | GAGGAG | 4 cut(s) | 1250, 1928, 1933, 1967 |
| BseSI | GKGCMC | 1 cut(s) | 1620 |
| BseXI | GCAGC | 2 cut(s) | 904, 2175 |
| BsgI | GTGCAG | 2 cut(s) | 146, 1206 |
| BshNI | GGYRCC | 1 cut(s) | 1617 |
| BshVI | ATCGAT | 2 cut(s) | 402, 1887 |
| BslFI | GGGAC | 2 cut(s) | 691, 1261 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 73, 76, 1284, 1285, 1939 |
| BsmAI | GTCTC | 5 cut(s) | 322, 508, 703, 1999, 2097 |
| BsmFI | GGGAC | 2 cut(s) | 691, 1261 |
| Bso31I | GGTCTC | 1 cut(s) | 322 |
| Bsp1286I | GDGCHC | 4 cut(s) | 279, 465, 837, 1620 |
| Bsp143I | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| BspACI | CCGC | 2 cut(s) | 67, 77 |
| BspCNI | CTCAG | 6 cut(s) | 300, 858, 940, 1114, 1324, 1405 |
| BspDI | ATCGAT | 2 cut(s) | 402, 1887 |
| BspLI | GGNNCC | 4 cut(s) | 291, 834, 1149, 1619 |
| BspMAI | CTGCAG | 2 cut(s) | 922, 1741 |
| BspMI | ACCTGC | 2 cut(s) | 1076, 1351 |
| BspOI | GCTAGC | 1 cut(s) | 2090 |
| BspPI | GGATC | 5 cut(s) | 284, 297, 678, 855, 1037 |
| BspQI | GCTCTTC | 1 cut(s) | 1876 |
| BspT107I | GGYRCC | 1 cut(s) | 1617 |
| BspTI | CTTAAG | 2 cut(s) | 755, 1814 |
| BspTNI | GGTCTC | 1 cut(s) | 322 |
| BsrDI | GCAATG | 1 cut(s) | 672 |
| BsrI | ACTGG | 5 cut(s) | 479, 685, 1032, 1618, 2186 |
| BssECI | CCNNGG | 2 cut(s) | 1535, 1569 |
| BssMI | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| BssT1I | CCWWGG | 1 cut(s) | 1535 |
| Bst2UI | CCWGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| Bst4CI | ACNGT | 5 cut(s) | 133, 166, 559, 1759, 2108 |
| Bst6I | CTCTTC | 2 cut(s) | 1876, 2054 |
| BstAFI | CTTAAG | 2 cut(s) | 755, 1814 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1352 |
| BstC8I | GCNNGC | 3 cut(s) | 1348, 1989, 2088 |
| BstDEI | CTNAG | 7 cut(s) | 308, 866, 940, 948, 1122, 1332, 1413 |
| BstF5I | GGATG | 5 cut(s) | 85, 253, 1411, 1502, 2047 |
| BstKTI | GATC | 9 cut(s) | 292, 402, 529, 673, 724, 850, 901, 1045, 2021 |
| BstMAI | GTCTC | 5 cut(s) | 322, 508, 703, 1999, 2097 |
| BstMBI | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 832, 1352 |
| BstNI | CCWGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 500 |
| BstSCI | CCNGG | 5 cut(s) | 69, 120, 268, 1569, 2037 |
| BstSFI | CTRYAG | 3 cut(s) | 456, 918, 1737 |
| BstSLI | GKGCMC | 1 cut(s) | 1620 |
| BstV1I | GCAGC | 2 cut(s) | 904, 2175 |
| BstX2I | RGATCY | 1 cut(s) | 289 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 269, 844 |
| BstYI | RGATCY | 1 cut(s) | 289 |
| Bsu15I | ATCGAT | 2 cut(s) | 402, 1887 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1122, 1332 |
| BsuI | GTATCC | 2 cut(s) | 742, 919 |
| BsuTUI | ATCGAT | 2 cut(s) | 402, 1887 |
| BtgZI | GCGATG | 1 cut(s) | 647 |
| BtsCI | GGATG | 5 cut(s) | 85, 253, 1411, 1502, 2047 |
| BtsI | GCAGTG | 3 cut(s) | 927, 1518, 1699 |
| BtsIMutI | CAGTG | 5 cut(s) | 486, 927, 1039, 1518, 1699 |
| BveI | ACCTGC | 2 cut(s) | 1076, 1351 |
| Cac8I | GCNNGC | 3 cut(s) | 1348, 1989, 2088 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1136 |
| ClaI | ATCGAT | 2 cut(s) | 402, 1887 |
| CsiI | ACCWGGT | 1 cut(s) | 120 |
| Csp6I | GTAC | 4 cut(s) | 1437, 1760, 1943, 2077 |
| CviAII | CATG | 4 cut(s) | 851, 1747, 1895, 1934 |
| CviQI | GTAC | 4 cut(s) | 1437, 1760, 1943, 2077 |
| DdeI | CTNAG | 7 cut(s) | 308, 866, 940, 948, 1122, 1332, 1413 |
| DpnI | GATC | 9 cut(s) | 291, 401, 528, 672, 723, 849, 900, 1044, 2020 |
| DpnII | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| DraI | TTTAAA | 1 cut(s) | 10 |
| Eam1104I | CTCTTC | 2 cut(s) | 1876, 2054 |
| EarI | CTCTTC | 2 cut(s) | 1876, 2054 |
| EciI | GGCGGA | 2 cut(s) | 56, 92 |
| Eco130I | CCWWGG | 1 cut(s) | 1535 |
| Eco24I | GRGCYC | 3 cut(s) | 279, 465, 837 |
| Eco31I | GGTCTC | 1 cut(s) | 322 |
| Eco57I | CTGAAG | 1 cut(s) | 1051 |
| Eco81I | CCTNAGG | 2 cut(s) | 1122, 1332 |
| EcoRII | CCWGG | 5 cut(s) | 69, 120, 268, 1569, 2037 |
| EcoT14I | CCWWGG | 1 cut(s) | 1535 |
| EcoT38I | GRGCYC | 3 cut(s) | 279, 465, 837 |
| ErhI | CCWWGG | 1 cut(s) | 1535 |
| FaeI | CATG | 4 cut(s) | 854, 1750, 1898, 1937 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 162, 194, 563, 595 |
| FaqI | GGGAC | 2 cut(s) | 691, 1261 |
| FatI | CATG | 4 cut(s) | 850, 1746, 1894, 1933 |
| FauNDI | CATATG | 1 cut(s) | 1357 |
| Fnu4HI | GCNGC | 2 cut(s) | 918, 2189 |
| FokI | GGATG | 5 cut(s) | 92, 260, 1418, 1489, 2054 |
| FriOI | GRGCYC | 3 cut(s) | 279, 465, 837 |
| Fsp4HI | GCNGC | 2 cut(s) | 918, 2189 |
| FspBI | CTAG | 9 cut(s) | 507, 534, 702, 729, 906, 1095, 1767, 1998, 2087 |
| GluI | GCNGC | 2 cut(s) | 918, 2189 |
| GsuI | CTGGAG | 5 cut(s) | 291, 462, 1086, 1931, 1970 |
| Hin1II | CATG | 4 cut(s) | 854, 1750, 1898, 1937 |
| HincII | GTYRAC | 2 cut(s) | 1091, 1242 |
| HindII | GTYRAC | 2 cut(s) | 1091, 1242 |
| HpaI | GTTAAC | 1 cut(s) | 1242 |
| HphI | GGTGA | 9 cut(s) | 258, 509, 577, 639, 704, 1524, 1592, 1664, 1695 |
| Hpy166II | GTNNAC | 2 cut(s) | 1091, 1242 |
| Hpy188III | TCNNGA | 9 cut(s) | 95, 338, 371, 719, 932, 1151, 1556, 1731, 1767 |
| Hpy8I | GTNNAC | 2 cut(s) | 1091, 1242 |
| HpyAV | CCTTC | 5 cut(s) | 344, 611, 725, 1516, 1715 |
| HpyCH4III | ACNGT | 5 cut(s) | 133, 166, 559, 1759, 2108 |
| HpyCH4IV | ACGT | 1 cut(s) | 2142 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 832, 1352 |
| HpyF3I | CTNAG | 7 cut(s) | 308, 866, 940, 948, 1122, 1332, 1413 |
| HpySE526I | ACGT | 1 cut(s) | 2142 |
| Hsp92II | CATG | 4 cut(s) | 854, 1750, 1898, 1937 |
| KspAI | GTTAAC | 1 cut(s) | 1242 |
| Kzo9I | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| LguI | GCTCTTC | 1 cut(s) | 1876 |
| LmnI | GCTCC | 3 cut(s) | 832, 1520, 2185 |
| Lsp1109I | GCAGC | 2 cut(s) | 904, 2175 |
| LweI | GCATC | 6 cut(s) | 619, 991, 1511, 1798, 2032, 2155 |
| MabI | ACCWGGT | 1 cut(s) | 120 |
| MaeI | CTAG | 9 cut(s) | 507, 534, 702, 729, 906, 1095, 1767, 1998, 2087 |
| MaeII | ACGT | 1 cut(s) | 2142 |
| MaeIII | GTNAC | 3 cut(s) | 250, 565, 853 |
| MalI | GATC | 9 cut(s) | 291, 401, 528, 672, 723, 849, 900, 1044, 2020 |
| MboI | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| MboII | GAAGA | 6 cut(s) | 160, 1057, 1211, 1239, 1863, 2071 |
| MfeI | CAATTG | 1 cut(s) | 438 |
| MflI | RGATCY | 1 cut(s) | 289 |
| MhlI | GDGCHC | 4 cut(s) | 279, 465, 837, 1620 |
| MmeI | TCCRAC | 6 cut(s) | 16, 360, 380, 566, 761, 795 |
| MseI | TTAA | 7 cut(s) | 9, 105, 213, 548, 756, 1241, 1815 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1032, 1214, 1670 |
| MspA1I | CMGCKG | 4 cut(s) | 307, 493, 865, 1948 |
| MspCI | CTTAAG | 2 cut(s) | 755, 1814 |
| MspR9I | CCNGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| MunI | CAATTG | 1 cut(s) | 438 |
| MvaI | CCWGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 832, 1352 |
| NdeI | CATATG | 1 cut(s) | 1357 |
| NdeII | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| NheI | GCTAGC | 1 cut(s) | 2086 |
| NlaIII | CATG | 4 cut(s) | 854, 1750, 1898, 1937 |
| NlaIV | GGNNCC | 4 cut(s) | 291, 834, 1149, 1619 |
| NmeAIII | GCCGAG | 1 cut(s) | 1080 |
| NmuCI | GTSAC | 2 cut(s) | 565, 853 |
| OliI | CACNNNNGTG | 1 cut(s) | 1032 |
| PaqCI | CACCTGC | 1 cut(s) | 1351 |
| PciSI | GCTCTTC | 1 cut(s) | 1876 |
| PfeI | GAWTC | 7 cut(s) | 91, 806, 1607, 1709, 1847, 2034, 2174 |
| PflFI | GACNNNGTC | 1 cut(s) | 571 |
| PfoI | TCCNGGA | 1 cut(s) | 2037 |
| PkrI | GCNGC | 2 cut(s) | 919, 2190 |
| PshAI | GACNNNNGTC | 1 cut(s) | 500 |
| Psp6I | CCWGG | 5 cut(s) | 69, 120, 268, 1569, 2037 |
| PspGI | CCWGG | 5 cut(s) | 69, 120, 268, 1569, 2037 |
| PspN4I | GGNNCC | 4 cut(s) | 291, 834, 1149, 1619 |
| PstI | CTGCAG | 2 cut(s) | 922, 1741 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1136 |
| PsuI | RGATCY | 1 cut(s) | 289 |
| PsyI | GACNNNGTC | 1 cut(s) | 571 |
| PvuII | CAGCTG | 4 cut(s) | 307, 493, 865, 1948 |
| RsaI | GTAC | 4 cut(s) | 1438, 1761, 1944, 2078 |
| RsaNI | GTAC | 4 cut(s) | 1437, 1760, 1943, 2077 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1032, 1214, 1670 |
| SapI | GCTCTTC | 1 cut(s) | 1876 |
| SaqAI | TTAA | 7 cut(s) | 9, 105, 213, 548, 756, 1241, 1815 |
| SatI | GCNGC | 2 cut(s) | 918, 2189 |
| Sau3AI | GATC | 9 cut(s) | 289, 399, 526, 670, 721, 847, 898, 1042, 2018 |
| ScaI | AGTACT | 1 cut(s) | 1438 |
| ScrFI | CCNGG | 5 cut(s) | 71, 122, 270, 1571, 2039 |
| SduI | GDGCHC | 4 cut(s) | 279, 465, 837, 1620 |
| SexAI | ACCWGGT | 1 cut(s) | 120 |
| SfaNI | GCATC | 6 cut(s) | 619, 991, 1511, 1798, 2032, 2155 |
| SfcI | CTRYAG | 3 cut(s) | 456, 918, 1737 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1032, 1214, 1670 |
| SmlI | CTYRAG | 4 cut(s) | 371, 755, 932, 1814 |
| SmoI | CTYRAG | 4 cut(s) | 371, 755, 932, 1814 |
| SsiI | CCGC | 2 cut(s) | 67, 77 |
| SspI | AATATT | 1 cut(s) | 887 |
| SspMI | CTAG | 9 cut(s) | 507, 534, 702, 729, 906, 1095, 1767, 1998, 2087 |
| StyD4I | CCNGG | 5 cut(s) | 69, 120, 268, 1569, 2037 |
| StyI | CCWWGG | 1 cut(s) | 1535 |
| TaaI | ACNGT | 5 cut(s) | 133, 166, 559, 1759, 2108 |
| TaiI | ACGT | 1 cut(s) | 2145 |
| TaqI | TCGA | 2 cut(s) | 402, 1887 |
| TatI | WGTACW | 2 cut(s) | 1436, 2076 |
| TfiI | GAWTC | 7 cut(s) | 91, 806, 1607, 1709, 1847, 2034, 2174 |
| Tru1I | TTAA | 7 cut(s) | 9, 105, 213, 548, 756, 1241, 1815 |
| Tru9I | TTAA | 7 cut(s) | 9, 105, 213, 548, 756, 1241, 1815 |
| TscAI | CASTG | 5 cut(s) | 486, 927, 1039, 1525, 1699 |
| TseFI | GTSAC | 2 cut(s) | 565, 853 |
| TseI | GCWGC | 2 cut(s) | 917, 2188 |
| Tsp45I | GTSAC | 2 cut(s) | 565, 853 |
| TspGWI | ACGGA | 1 cut(s) | 338 |
| TspRI | CASTG | 5 cut(s) | 486, 927, 1039, 1525, 1699 |
| Tth111I | GACNNNGTC | 1 cut(s) | 571 |
| Vha464I | CTTAAG | 2 cut(s) | 755, 1814 |
| XapI | RAATTY | 5 cut(s) | 53, 152, 238, 991, 1154 |
| XbaI | TCTAGA | 1 cut(s) | 1766 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 77 |
| XspI | CTAG | 9 cut(s) | 507, 534, 702, 729, 906, 1095, 1767, 1998, 2087 |
| ZrmI | AGTACT | 1 cut(s) | 1438 |