No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G17780 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT1G73130 AT2G16575 |
| fragaria_vesca | FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g18640 FvH4_3g25880 |
| malus_domestica | MD03G1240400.v1.1 MD11G1259700.v1.1 |
| prunus_persica | Prupe.4G170200_v2.0.a1 Prupe.4G170200_v2.0.a1 |
| pyrus_communis | pycom03g18560 pycom11g22940 |
| rosa_chinensis | RchiOBHm_Chr5g0031461 |
| rosa_laevigata | RLG00000002875 RLG00000029120 RLG00000033309 |
| rosa_multiflora | Rmu_sc0000404.1_g000002 |
| rosa_roxburghii | Rroxscaffold_176G00431450 Rroxscaffold_1G00048870 Rroxscaffold_6G00411210 |
| rosa_rugosa | Rorug05G0126000 |
| rosa_samantha | Rh5AG218800 Rh5BG218100 Rh5CG241800 Rh5DG223400 |
| rosa_wichuraiana | Rw5G019960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2390 |
| Acc16I | TGCGCA | 1 cut(s) | 1305 |
| Acc36I | ACCTGC | 1 cut(s) | 2390 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 76 |
| AccII | CGCG | 1 cut(s) | 473 |
| AciI | CCGC | 4 cut(s) | 471, 473, 1139, 1748 |
| AclWI | GGATC | 4 cut(s) | 314, 695, 1176, 1214 |
| AcoI | YGGCCR | 1 cut(s) | 468 |
| AcsI | RAATTY | 8 cut(s) | 1102, 1144, 1216, 1438, 1628, 1790, 1810, 2380 |
| AcuI | CTGAAG | 6 cut(s) | 225, 657, 1159, 1524, 1728, 1968 |
| AfaI | GTAC | 6 cut(s) | 241, 1017, 1596, 2031, 2214, 2309 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 76, 179, 1769 |
| AflII | CTTAAG | 2 cut(s) | 424, 1796 |
| AflIII | ACRYGT | 1 cut(s) | 196 |
| AjnI | CCWGG | 4 cut(s) | 505, 1236, 1729, 2268 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 348, 380 |
| Alw26I | GTCTC | 7 cut(s) | 679, 730, 1138, 1288, 1429, 1504, 2006 |
| AlwI | GGATC | 4 cut(s) | 314, 695, 1176, 1214 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2102 |
| AoxI | GGCC | 2 cut(s) | 468, 1456 |
| ApeKI | GCWGC | 2 cut(s) | 1742, 1745 |
| ApoI | RAATTY | 8 cut(s) | 1102, 1144, 1216, 1438, 1628, 1790, 1810, 2380 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 447 |
| AspLEI | GCGC | 1 cut(s) | 1306 |
| AspS9I | GGNCC | 4 cut(s) | 23, 370, 1001, 1050 |
| AsuHPI | GGTGA | 8 cut(s) | 353, 524, 1212, 1503, 1806, 2185, 2311, 2414 |
| AsuNHI | GCTAGC | 1 cut(s) | 2317 |
| AvaII | GGWCC | 4 cut(s) | 23, 370, 1001, 1050 |
| AxyI | CCTNAGG | 1 cut(s) | 1429 |
| BanII | GRGCYC | 2 cut(s) | 309, 690 |
| BauI | CACGAG | 1 cut(s) | 1554 |
| BbsI | GAAGAC | 2 cut(s) | 450, 2183 |
| BbvCI | CCTCAGC | 1 cut(s) | 1315 |
| BbvI | GCAGC | 2 cut(s) | 1729, 1757 |
| BccI | CCATC | 2 cut(s) | 815, 1886 |
| BciT130I | CCWGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| BciVI | GTATCC | 3 cut(s) | 91, 769, 891 |
| BclI | TGATCA | 1 cut(s) | 955 |
| BcoDI | GTCTC | 7 cut(s) | 679, 730, 1138, 1288, 1429, 1504, 2006 |
| BfaI | CTAG | 2 cut(s) | 1346, 2318 |
| BfmI | CTRYAG | 6 cut(s) | 300, 1149, 1443, 1743, 2082, 2094 |
| BfrI | CTTAAG | 2 cut(s) | 424, 1796 |
| BfuAI | ACCTGC | 1 cut(s) | 2390 |
| BfuI | GTATCC | 3 cut(s) | 91, 769, 891 |
| BglII | AGATCT | 1 cut(s) | 2055 |
| BisI | GCNGC | 3 cut(s) | 471, 1743, 1746 |
| BlpI | GCTNAGC | 1 cut(s) | 1637 |
| BlsI | GCNGC | 3 cut(s) | 472, 1744, 1747 |
| BmcAI | AGTACT | 1 cut(s) | 241 |
| Bme1390I | CCNGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| Bme18I | GGWCC | 4 cut(s) | 23, 370, 1001, 1050 |
| BmgT120I | GGNCC | 4 cut(s) | 23, 370, 1001, 1050 |
| BmiI | GGNNCC | 3 cut(s) | 371, 687, 1052 |
| BmrFI | CCNGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| BmrI | ACTGGG | 1 cut(s) | 1007 |
| BmsI | GCATC | 6 cut(s) | 114, 193, 268, 838, 1178, 2263 |
| BmtI | GCTAGC | 1 cut(s) | 2321 |
| BmuI | ACTGGG | 1 cut(s) | 1007 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1762 |
| BpiI | GAAGAC | 2 cut(s) | 450, 2183 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 401, 433, 890, 922 |
| BpmI | CTGGAG | 3 cut(s) | 917, 1752, 1896 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1315 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1637 |
| BpuEI | CTTGAG | 2 cut(s) | 334, 425 |
| BsaAI | YACGTR | 1 cut(s) | 1598 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1900 |
| BsaI | GGTCTC | 4 cut(s) | 679, 1429, 1504, 2006 |
| BsaJI | CCNNGG | 5 cut(s) | 364, 471, 771, 1236, 1729 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 2408 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 76, 179, 1769 |
| Bse1I | ACTGG | 5 cut(s) | 1013, 1052, 1929, 2107, 2344 |
| Bse21I | CCTNAGG | 1 cut(s) | 1429 |
| Bse3DI | GCAATG | 3 cut(s) | 970, 1251, 1542 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1900 |
| BseBI | CCWGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| BseDI | CCNNGG | 5 cut(s) | 364, 471, 771, 1236, 1729 |
| BseJI | GATNNNNATC | 1 cut(s) | 1900 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 76, 179, 1769 |
| BseMI | GCAATG | 3 cut(s) | 970, 1251, 1542 |
| BseNI | ACTGG | 5 cut(s) | 1013, 1052, 1929, 2107, 2344 |
| BseRI | GAGGAG | 3 cut(s) | 422, 1417, 1463 |
| BseXI | GCAGC | 2 cut(s) | 1729, 1757 |
| Bsh1236I | CGCG | 1 cut(s) | 473 |
| BshFI | GGCC | 2 cut(s) | 470, 1458 |
| BsiWI | CGTACG | 1 cut(s) | 1594 |
| BslFI | GGGAC | 2 cut(s) | 383, 1712 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 76, 179, 1769 |
| BsmAI | GTCTC | 7 cut(s) | 679, 730, 1138, 1288, 1429, 1504, 2006 |
| BsmFI | GGGAC | 2 cut(s) | 383, 1712 |
| BsmI | GAATGC | 3 cut(s) | 127, 1088, 1744 |
| BsnI | GGCC | 2 cut(s) | 470, 1458 |
| Bso31I | GGTCTC | 4 cut(s) | 679, 1429, 1504, 2006 |
| Bsp1286I | GDGCHC | 2 cut(s) | 309, 690 |
| Bsp143I | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1637 |
| Bsp19I | CCATGG | 1 cut(s) | 771 |
| BspACI | CCGC | 4 cut(s) | 471, 473, 1139, 1748 |
| BspANI | GGCC | 2 cut(s) | 470, 1458 |
| BspFNI | CGCG | 1 cut(s) | 473 |
| BspLI | GGNNCC | 3 cut(s) | 371, 687, 1052 |
| BspMAI | CTGCAG | 2 cut(s) | 1747, 2098 |
| BspMI | ACCTGC | 1 cut(s) | 2390 |
| BspOI | GCTAGC | 1 cut(s) | 2321 |
| BspPI | GGATC | 4 cut(s) | 314, 695, 1176, 1214 |
| BspTI | CTTAAG | 2 cut(s) | 424, 1796 |
| BspTNI | GGTCTC | 4 cut(s) | 679, 1429, 1504, 2006 |
| BsrDI | GCAATG | 3 cut(s) | 970, 1251, 1542 |
| BsrI | ACTGG | 5 cut(s) | 1013, 1052, 1929, 2107, 2344 |
| BssECI | CCNNGG | 5 cut(s) | 364, 471, 771, 1236, 1729 |
| BssMI | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| BssSI | CACGAG | 1 cut(s) | 1554 |
| BssT1I | CCWWGG | 2 cut(s) | 364, 771 |
| Bst2BI | CACGAG | 1 cut(s) | 1554 |
| Bst2UI | CCWGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| Bst4CI | ACNGT | 5 cut(s) | 235, 667, 1924, 2029, 2141 |
| Bst6I | CTCTTC | 2 cut(s) | 913, 2285 |
| BstAFI | CTTAAG | 2 cut(s) | 424, 1796 |
| BstBAI | YACGTR | 1 cut(s) | 1598 |
| BstC8I | GCNNGC | 4 cut(s) | 335, 1643, 1647, 2319 |
| BstDSI | CCRYGG | 2 cut(s) | 471, 771 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 177 |
| BstFNI | CGCG | 1 cut(s) | 473 |
| BstHHI | GCGC | 1 cut(s) | 1306 |
| BstKTI | GATC | 7 cut(s) | 322, 703, 958, 1184, 1209, 2058, 2252 |
| BstMAI | GTCTC | 7 cut(s) | 679, 730, 1138, 1288, 1429, 1504, 2006 |
| BstMBI | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1136, 1642, 2093 |
| BstNI | CCWGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| BstNSI | RCATGY | 2 cut(s) | 200, 983 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1762 |
| BstSCI | CCNGG | 4 cut(s) | 505, 1236, 1729, 2268 |
| BstSFI | CTRYAG | 6 cut(s) | 300, 1149, 1443, 1743, 2082, 2094 |
| BstUI | CGCG | 1 cut(s) | 473 |
| BstV1I | GCAGC | 2 cut(s) | 1729, 1757 |
| BstV2I | GAAGAC | 2 cut(s) | 450, 2183 |
| BstX2I | RGATCY | 5 cut(s) | 319, 700, 1181, 1206, 2055 |
| BstYI | RGATCY | 5 cut(s) | 319, 700, 1181, 1206, 2055 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1429 |
| BsuI | GTATCC | 3 cut(s) | 91, 769, 891 |
| BsuRI | GGCC | 2 cut(s) | 470, 1458 |
| BtgI | CCRYGG | 2 cut(s) | 471, 771 |
| BtsI | GCAGTG | 1 cut(s) | 1978 |
| BtsIMutI | CAGTG | 5 cut(s) | 138, 591, 1803, 1944, 1978 |
| BveI | ACCTGC | 1 cut(s) | 2390 |
| Cac8I | GCNNGC | 4 cut(s) | 335, 1643, 1647, 2319 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2102 |
| CfoI | GCGC | 1 cut(s) | 1306 |
| Cfr13I | GGNCC | 4 cut(s) | 23, 370, 1001, 1050 |
| Cfr42I | CCGCGG | 1 cut(s) | 474 |
| CseI | GACGC | 1 cut(s) | 2076 |
| Csp6I | GTAC | 6 cut(s) | 240, 1016, 1595, 2030, 2213, 2308 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 873, 908 |
| CviQI | GTAC | 6 cut(s) | 240, 1016, 1595, 2030, 2213, 2308 |
| DpnI | GATC | 7 cut(s) | 321, 702, 957, 1183, 1208, 2057, 2251 |
| DpnII | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| DraI | TTTAAA | 1 cut(s) | 12 |
| EaeI | YGGCCR | 1 cut(s) | 468 |
| Eam1104I | CTCTTC | 2 cut(s) | 913, 2285 |
| EarI | CTCTTC | 2 cut(s) | 913, 2285 |
| Eco130I | CCWWGG | 2 cut(s) | 364, 771 |
| Eco24I | GRGCYC | 2 cut(s) | 309, 690 |
| Eco31I | GGTCTC | 4 cut(s) | 679, 1429, 1504, 2006 |
| Eco32I | GATATC | 1 cut(s) | 1672 |
| Eco47I | GGWCC | 4 cut(s) | 23, 370, 1001, 1050 |
| Eco57I | CTGAAG | 6 cut(s) | 225, 657, 1159, 1524, 1728, 1968 |
| Eco81I | CCTNAGG | 1 cut(s) | 1429 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 177 |
| EcoRI | GAATTC | 4 cut(s) | 1102, 1144, 1438, 1628 |
| EcoRII | CCWGG | 4 cut(s) | 505, 1236, 1729, 2268 |
| EcoRV | GATATC | 1 cut(s) | 1672 |
| EcoT14I | CCWWGG | 2 cut(s) | 364, 771 |
| EcoT22I | ATGCAT | 2 cut(s) | 129, 809 |
| EcoT38I | GRGCYC | 2 cut(s) | 309, 690 |
| ErhI | CCWWGG | 2 cut(s) | 364, 771 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1941, 1973 |
| FaqI | GGGAC | 2 cut(s) | 383, 1712 |
| FbaI | TGATCA | 1 cut(s) | 955 |
| Fnu4HI | GCNGC | 3 cut(s) | 471, 1743, 1746 |
| FriOI | GRGCYC | 2 cut(s) | 309, 690 |
| Fsp4HI | GCNGC | 3 cut(s) | 471, 1743, 1746 |
| FspBI | CTAG | 2 cut(s) | 1346, 2318 |
| FspI | TGCGCA | 1 cut(s) | 1305 |
| GlaI | GCGC | 1 cut(s) | 1305 |
| GluI | GCNGC | 3 cut(s) | 471, 1743, 1746 |
| GsuI | CTGGAG | 3 cut(s) | 917, 1752, 1896 |
| HaeIII | GGCC | 2 cut(s) | 470, 1458 |
| HgaI | GACGC | 1 cut(s) | 2076 |
| HhaI | GCGC | 1 cut(s) | 1306 |
| Hin6I | GCGC | 1 cut(s) | 1304 |
| HinP1I | GCGC | 1 cut(s) | 1304 |
| HincII | GTYRAC | 3 cut(s) | 498, 903, 1233 |
| HindII | GTYRAC | 3 cut(s) | 498, 903, 1233 |
| HindIII | AAGCTT | 1 cut(s) | 256 |
| HpaI | GTTAAC | 2 cut(s) | 498, 1233 |
| HphI | GGTGA | 8 cut(s) | 353, 524, 1212, 1503, 1806, 2185, 2311, 2414 |
| Hpy166II | GTNNAC | 6 cut(s) | 356, 498, 903, 1233, 1803, 2213 |
| Hpy188III | TCNNGA | 9 cut(s) | 263, 404, 704, 782, 1556, 2001, 2037, 2053, 2385 |
| Hpy8I | GTNNAC | 6 cut(s) | 356, 498, 903, 1233, 1803, 2213 |
| HpyAV | CCTTC | 8 cut(s) | 779, 1016, 1183, 1477, 1777, 1985, 2043, 2296 |
| HpyCH4III | ACNGT | 5 cut(s) | 235, 667, 1924, 2029, 2141 |
| HpyCH4IV | ACGT | 2 cut(s) | 1597, 1866 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1136, 1642, 2093 |
| HpySE526I | ACGT | 2 cut(s) | 1597, 1866 |
| HspAI | GCGC | 1 cut(s) | 1304 |
| Ksp22I | TGATCA | 1 cut(s) | 955 |
| KspAI | GTTAAC | 2 cut(s) | 498, 1233 |
| KspI | CCGCGG | 1 cut(s) | 474 |
| Kzo9I | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| LmnI | GCTCC | 5 cut(s) | 604, 685, 1481, 1915, 2416 |
| Lsp1109I | GCAGC | 2 cut(s) | 1729, 1757 |
| LweI | GCATC | 6 cut(s) | 114, 193, 268, 838, 1178, 2263 |
| MaeI | CTAG | 2 cut(s) | 1346, 2318 |
| MaeII | ACGT | 2 cut(s) | 1597, 1866 |
| MaeIII | GTNAC | 6 cut(s) | 325, 385, 397, 1598, 2141, 2402 |
| MalI | GATC | 7 cut(s) | 321, 702, 957, 1183, 1208, 2057, 2251 |
| MboI | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| MfeI | CAATTG | 2 cut(s) | 942, 1983 |
| MflI | RGATCY | 5 cut(s) | 319, 700, 1181, 1206, 2055 |
| MhlI | GDGCHC | 2 cut(s) | 309, 690 |
| MmeI | TCCRAC | 4 cut(s) | 16, 444, 788, 1141 |
| Mph1103I | ATGCAT | 2 cut(s) | 129, 809 |
| MroXI | GAANNNNTTC | 1 cut(s) | 447 |
| MseI | TTAA | 6 cut(s) | 11, 105, 425, 497, 1232, 1797 |
| MslI | CAYNNNNRTG | 2 cut(s) | 932, 2400 |
| MspA1I | CMGCKG | 4 cut(s) | 473, 715, 1130, 1748 |
| MspCI | CTTAAG | 2 cut(s) | 424, 1796 |
| MspR9I | CCNGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| MunI | CAATTG | 2 cut(s) | 942, 1983 |
| Mva1269I | GAATGC | 3 cut(s) | 127, 1088, 1744 |
| MvaI | CCWGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| MvnI | CGCG | 1 cut(s) | 473 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1136, 1642, 2093 |
| NcoI | CCATGG | 1 cut(s) | 771 |
| NdeII | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| NheI | GCTAGC | 1 cut(s) | 2317 |
| NlaIV | GGNNCC | 3 cut(s) | 371, 687, 1052 |
| NmeAIII | GCCGAG | 1 cut(s) | 363 |
| NmuCI | GTSAC | 4 cut(s) | 325, 1598, 2141, 2402 |
| NsbI | TGCGCA | 1 cut(s) | 1305 |
| NsiI | ATGCAT | 2 cut(s) | 129, 809 |
| NspI | RCATGY | 2 cut(s) | 200, 983 |
| PaqCI | CACCTGC | 1 cut(s) | 2390 |
| PciI | ACATGT | 1 cut(s) | 196 |
| PctI | GAATGC | 3 cut(s) | 127, 1088, 1744 |
| PdmI | GAANNNNTTC | 1 cut(s) | 447 |
| Pfl23II | CGTACG | 1 cut(s) | 1594 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 76 |
| PfoI | TCCNGGA | 1 cut(s) | 2268 |
| PkrI | GCNGC | 3 cut(s) | 472, 1744, 1747 |
| Ppu21I | YACGTR | 1 cut(s) | 1598 |
| PscI | ACATGT | 1 cut(s) | 196 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1762 |
| Psp6I | CCWGG | 4 cut(s) | 505, 1236, 1729, 2268 |
| PspGI | CCWGG | 4 cut(s) | 505, 1236, 1729, 2268 |
| PspLI | CGTACG | 1 cut(s) | 1594 |
| PspN4I | GGNNCC | 3 cut(s) | 371, 687, 1052 |
| PspPI | GGNCC | 4 cut(s) | 23, 370, 1001, 1050 |
| PstI | CTGCAG | 2 cut(s) | 1747, 2098 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2102 |
| PsuI | RGATCY | 5 cut(s) | 319, 700, 1181, 1206, 2055 |
| PvuII | CAGCTG | 2 cut(s) | 715, 1130 |
| RsaI | GTAC | 6 cut(s) | 241, 1017, 1596, 2031, 2214, 2309 |
| RsaNI | GTAC | 6 cut(s) | 240, 1016, 1595, 2030, 2213, 2308 |
| RseI | CAYNNNNRTG | 2 cut(s) | 932, 2400 |
| SacII | CCGCGG | 1 cut(s) | 474 |
| SaqAI | TTAA | 6 cut(s) | 11, 105, 425, 497, 1232, 1797 |
| SatI | GCNGC | 3 cut(s) | 471, 1743, 1746 |
| Sau3AI | GATC | 7 cut(s) | 319, 700, 955, 1181, 1206, 2055, 2249 |
| Sau96I | GGNCC | 4 cut(s) | 23, 370, 1001, 1050 |
| ScaI | AGTACT | 1 cut(s) | 241 |
| ScrFI | CCNGG | 4 cut(s) | 507, 1238, 1731, 2270 |
| SduI | GDGCHC | 2 cut(s) | 309, 690 |
| SfaNI | GCATC | 6 cut(s) | 114, 193, 268, 838, 1178, 2263 |
| SfcI | CTRYAG | 6 cut(s) | 300, 1149, 1443, 1743, 2082, 2094 |
| Sfr303I | CCGCGG | 1 cut(s) | 474 |
| SgrBI | CCGCGG | 1 cut(s) | 474 |
| SinI | GGWCC | 4 cut(s) | 23, 370, 1001, 1050 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 932, 2400 |
| SmlI | CTYRAG | 4 cut(s) | 349, 404, 424, 1796 |
| SmoI | CTYRAG | 4 cut(s) | 349, 404, 424, 1796 |
| SsiI | CCGC | 4 cut(s) | 471, 473, 1139, 1748 |
| SspMI | CTAG | 2 cut(s) | 1346, 2318 |
| StyD4I | CCNGG | 4 cut(s) | 505, 1236, 1729, 2268 |
| StyI | CCWWGG | 2 cut(s) | 364, 771 |
| TaaI | ACNGT | 5 cut(s) | 235, 667, 1924, 2029, 2141 |
| TaiI | ACGT | 2 cut(s) | 1600, 1869 |
| TaqI | TCGA | 2 cut(s) | 1352, 1954 |
| TatI | WGTACW | 3 cut(s) | 239, 1015, 2212 |
| TauI | GCSGC | 1 cut(s) | 473 |
| Tru1I | TTAA | 6 cut(s) | 11, 105, 425, 497, 1232, 1797 |
| Tru9I | TTAA | 6 cut(s) | 11, 105, 425, 497, 1232, 1797 |
| TscAI | CASTG | 5 cut(s) | 138, 598, 1810, 1951, 1978 |
| TseFI | GTSAC | 4 cut(s) | 325, 1598, 2141, 2402 |
| TseI | GCWGC | 2 cut(s) | 1742, 1745 |
| Tsp45I | GTSAC | 4 cut(s) | 325, 1598, 2141, 2402 |
| TspGWI | ACGGA | 2 cut(s) | 1752, 2056 |
| TspRI | CASTG | 5 cut(s) | 138, 598, 1810, 1951, 1978 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 76 |
| Vha464I | CTTAAG | 2 cut(s) | 424, 1796 |
| VpaK11BI | GGWCC | 4 cut(s) | 23, 370, 1001, 1050 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 177 |
| XapI | RAATTY | 8 cut(s) | 1102, 1144, 1216, 1438, 1628, 1790, 1810, 2380 |
| XceI | RCATGY | 2 cut(s) | 200, 983 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 598, 1682 |
| XmnI | GAANNNNTTC | 1 cut(s) | 447 |
| XspI | CTAG | 2 cut(s) | 1346, 2318 |
| ZrmI | AGTACT | 1 cut(s) | 241 |
| Zsp2I | ATGCAT | 2 cut(s) | 129, 809 |