AT1G76970
MYB Family

Target of Myb protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
28922415 .. 28925468
3054 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G76970.3

Sequence Viewer

Length: 1341 bp
ATGGCAAATGATGCGGCTGCATGTGCAGAAAGGGCTACAAATGATATGCTGATTGGTCCAGATTGGGCTATTAACATTGAATTGTGTGATCTTATCAACATGGATCCTAGTCAAGCAAAAGAAGCTGTGAAGGTGCTCAAGAAGCGGTTAGGAAGTAAAAACTCTAAAGTCCAGATTCTTGCACTTTATGCATTGGAAACTTTAAGTAAGAATTGTGGCGAAAACGTGTACCAGCTTATCATTGACCGTGGTCTATTGAATGACATGGTCAAAATAGTGAAGAAAAAGCCGGAACTGAATGTGAGGGAAAAGATACTAACTTTGTTAGACACATGGCAAGAAGCCTTTGGTGGACGTGGAGGTCGATACCCACAATACTACAATGCCTATAACGATCTCAGGTCTGCTGGAATTGAGTTTCCGCCTCGAACGGAAAGCAGTCTATCGTTCTTTACTCCACCGCAGACTCAGCCAGATGAAGATGCTGCTATTCAGGCTTCGTTGCAAGGAGATGATGCTTCTAGCCTCAGCCTGGAAGAGATTCAAAGCGCTGAGGGATCAGTTGATGTTTTGATGGACATGCTTGGAGCACATGATCCCGGGAATCCCGAGAGTTTAAAAGAAGAAGTTATAGTAGACTTGGTTGAGCAATGTCGTACTTATCAAAGACGTGTAATGACTCTTGTGAACACTACAACAGATGAGGAACTTCTGTGTCAGGGATTGGCATTAAACGATAATTTGCAGCATGTTCTTCAGCGTCACGATGATATCGCAAATGTCGGCTCTGTTCCTTCAAATGGAAGGAATACTAGAGCTCCTCCTCCAGTTCAGATTGTTGACATCAATCATGATGATGAAGATGACGAATCAGATGATGAGTTTGCTCGGCTTGCTCACAGGTCTTCAACACCTACAAGGAGACCAGTACATGGTAGTGATTCGGGTATGGTGGATATCCTTAGTGGGGACGTCTATAAACCTCAAGGCAACTCCTCCTCACAGGGAGTAAAGAAGCCTCCTCCTCCTCCTCCGCATACTTCTTCTTCCTCTTCTTCTCCTGTTTTCGATGATGCAAGTCCACAACAAAGCAAATCCTCTGAGGTAATTAGGAATCTTCCACCTCCGCCTTCAAGGCACAACCAGAGGCAACAGTTCTTTGAGCATCACCACTCGAGTAGCGGCTCAGATTCCTCTTACGAGGGACAGACCCGGAACCTTTCTTTGACAAGTAGTGAACCGCAGAAAGAAGAGAAACCAGAGGATTTGCTTTTCAAAGACCTGGTTGAGTTCGCCAAAACCAGGTCCTCCAAAGCCAACAATAATAATAGGTCGCTCTGA

Protein Analysis

446

Amino Acids

49.25

Weight (kDa)

4.97

Isoelectric Point (pI)

55.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VHS PF00790 10 - 119 8.5e-30 VHS domain
GAT PF03127 186 - 258 1.1e-18 GAT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 360
AatII GACGTC 1 cut(s) 975
AccB7I CCANNNNNTGG 1 cut(s) 932
AccI GTMKAC 1 cut(s) 636
AciI CCGC 8 cut(s) 14, 145, 422, 461, 1034, 1127, 1182, 1241
AclWI GGATC 4 cut(s) 98, 111, 565, 590
AcuI CTGAAG 1 cut(s) 740
AcyI GRCGYC 1 cut(s) 972
AfaI GTAC 3 cut(s) 230, 658, 930
AfeI AGCGCT 1 cut(s) 550
AfiI CCNNNNNNNGG 5 cut(s) 532, 800, 932, 967, 1302
AflIII ACRYGT 2 cut(s) 225, 670
AgsI TTSAA 7 cut(s) 80, 259, 545, 798, 909, 1134, 1276
AjiI CACGTC 2 cut(s) 356, 671
AjnI CCWGG 3 cut(s) 531, 1281, 1301
AluBI AGCT 3 cut(s) 125, 235, 818
AluI AGCT 3 cut(s) 125, 235, 818
Alw21I GWGCWC 3 cut(s) 138, 592, 820
Alw26I GTCTC 1 cut(s) 916
AlwI GGATC 4 cut(s) 98, 111, 565, 590
Ama87I CYCGRG 3 cut(s) 599, 608, 1174
Aor51HI AGCGCT 1 cut(s) 550
ApeKI GCWGC 3 cut(s) 17, 485, 745
Asp700I GAANNNNTTC 1 cut(s) 540
AspLEI GCGC 1 cut(s) 551
AspS9I GGNCC 2 cut(s) 56, 1305
AsuC2I CCSGG 3 cut(s) 600, 601, 1213
AsuHPI GGTGA 1 cut(s) 1160
AvaI CYCGRG 3 cut(s) 599, 608, 1174
AvaII GGWCC 2 cut(s) 56, 1305
BamHI GGATCC 1 cut(s) 103
BanII GRGCYC 1 cut(s) 820
BbsI GAAGAC 1 cut(s) 897
Bbv12I GWGCWC 3 cut(s) 138, 592, 820
BbvCI CCTCAGC 2 cut(s) 527, 552
BbvI GCAGC 3 cut(s) 4, 472, 757
BccI CCATC 1 cut(s) 568
BciT130I CCWGG 3 cut(s) 533, 1283, 1303
BcnI CCSGG 3 cut(s) 600, 601, 1213
BcoDI GTCTC 1 cut(s) 916
BfaI CTAG 3 cut(s) 108, 522, 813
BfoI RGCGCY 1 cut(s) 552
BglI GCCNNNNNGGC 1 cut(s) 1135
BisI GCNGC 5 cut(s) 15, 18, 486, 746, 1183
BlsI GCNGC 5 cut(s) 16, 19, 487, 747, 1184
Bme1390I CCNGG 6 cut(s) 533, 600, 601, 1213, 1283, 1303
Bme18I GGWCC 2 cut(s) 56, 1305
BmeT110I CYCGRG 3 cut(s) 599, 608, 1174
BmgBI CACGTC 2 cut(s) 356, 671
BmgT120I GGNCC 2 cut(s) 56, 1305
BmiI GGNNCC 2 cut(s) 105, 1217
BmrFI CCNGG 6 cut(s) 533, 600, 601, 1213, 1283, 1303
BmsI GCATC 4 cut(s) 472, 505, 1063, 1174
BoxI GACNNNNGTC 1 cut(s) 249
BpiI GAAGAC 1 cut(s) 897
BpmI CTGGAG 1 cut(s) 810
Bpu10I CCTNAGC 2 cut(s) 527, 552
BpuEI CTTGAG 2 cut(s) 122, 969
BpuMI CCSGG 3 cut(s) 600, 601, 1213
BsaHI GRCGYC 1 cut(s) 972
BsaI GGTCTC 1 cut(s) 916
BsaJI CCNNGG 2 cut(s) 247, 599
BsaXI ACNNNNNCTCC 2 cut(s) 802, 832
Bsc4I CCNNNNNNNGG 5 cut(s) 532, 800, 932, 967, 1302
Bse1I ACTGG 2 cut(s) 827, 926
Bse3DI GCAATG 1 cut(s) 656
BseBI CCWGG 3 cut(s) 533, 1283, 1303
BseDI CCNNGG 2 cut(s) 247, 599
BseLI CCNNNNNNNGG 5 cut(s) 532, 800, 932, 967, 1302
BseMI GCAATG 1 cut(s) 656
BseMII CTCAG 6 cut(s) 412, 482, 541, 543, 1092, 1200
BseNI ACTGG 2 cut(s) 827, 926
BseRI GAGGAG 8 cut(s) 810, 813, 985, 988, 1011, 1014, 1017, 1020
BseXI GCAGC 3 cut(s) 4, 472, 757
BsgI GTGCAG 1 cut(s) 45
BsiHKAI GWGCWC 3 cut(s) 138, 592, 820
BsiHKCI CYCGRG 3 cut(s) 599, 608, 1174
BsiSI CCGG 3 cut(s) 290, 600, 1213
BslFI GGGAC 2 cut(s) 983, 1218
BslI CCNNNNNNNGG 5 cut(s) 532, 800, 932, 967, 1302
BsmAI GTCTC 1 cut(s) 916
BsmFI GGGAC 2 cut(s) 983, 1218
Bso31I GGTCTC 1 cut(s) 916
BsoBI CYCGRG 3 cut(s) 599, 608, 1174
Bsp1286I GDGCHC 3 cut(s) 138, 592, 820
Bsp143I GATC 5 cut(s) 88, 103, 394, 557, 595
BspACI CCGC 8 cut(s) 14, 145, 422, 461, 1034, 1127, 1182, 1241
BspCNI CTCAG 6 cut(s) 411, 481, 540, 544, 1093, 1199
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 2 cut(s) 105, 1217
BspPI GGATC 4 cut(s) 98, 111, 565, 590
BspTNI GGTCTC 1 cut(s) 916
BsrDI GCAATG 1 cut(s) 656
BsrI ACTGG 2 cut(s) 827, 926
BssECI CCNNGG 2 cut(s) 247, 599
BssMI GATC 5 cut(s) 88, 103, 394, 557, 595
BssNI GRCGYC 1 cut(s) 972
Bst2UI CCWGG 3 cut(s) 533, 1283, 1303
Bst4CI ACNGT 2 cut(s) 248, 1155
Bst6I CTCTTC 3 cut(s) 531, 1057, 1245
BstACI GRCGYC 1 cut(s) 972
BstAPI GCANNNNNTGC 2 cut(s) 11, 188
BstC8I GCNNGC 1 cut(s) 894
BstDEI CTNAG 7 cut(s) 398, 468, 527, 552, 962, 1101, 1186
BstDSI CCRYGG 1 cut(s) 247
BstH2I RGCGCY 1 cut(s) 552
BstHHI GCGC 1 cut(s) 551
BstKTI GATC 5 cut(s) 91, 106, 397, 560, 598
BstMAI GTCTC 1 cut(s) 916
BstMBI GATC 5 cut(s) 88, 103, 394, 557, 595
BstNI CCWGG 3 cut(s) 533, 1283, 1303
BstNSI RCATGY 3 cut(s) 24, 583, 752
BstPAI GACNNNNGTC 1 cut(s) 249
BstSCI CCNGG 6 cut(s) 531, 598, 599, 1211, 1281, 1301
BstV1I GCAGC 3 cut(s) 4, 472, 757
BstV2I GAAGAC 1 cut(s) 897
BstX2I RGATCY 1 cut(s) 103
BstYI RGATCY 1 cut(s) 103
BtgI CCRYGG 1 cut(s) 247
BtrI CACGTC 2 cut(s) 356, 671
Cac8I GCNNGC 1 cut(s) 894
CciI TCATGA 1 cut(s) 850
CfoI GCGC 1 cut(s) 551
Cfr13I GGNCC 2 cut(s) 56, 1305
Cfr9I CCCGGG 1 cut(s) 599
CseI GACGC 1 cut(s) 749
CsiI ACCWGGT 2 cut(s) 1281, 1301
Csp6I GTAC 3 cut(s) 229, 657, 929
CviAII CATG 9 cut(s) 21, 100, 265, 333, 580, 593, 749, 851, 932
CviQI GTAC 3 cut(s) 229, 657, 929
DdeI CTNAG 7 cut(s) 398, 468, 527, 552, 962, 1101, 1186
DpnI GATC 5 cut(s) 90, 105, 396, 559, 597
DpnII GATC 5 cut(s) 88, 103, 394, 557, 595
DraI TTTAAA 1 cut(s) 618
DrdI GACNNNNNNGTC 1 cut(s) 360
DseDI GACNNNNNNGTC 1 cut(s) 360
Eam1104I CTCTTC 3 cut(s) 531, 1057, 1245
EarI CTCTTC 3 cut(s) 531, 1057, 1245
EciI GGCGGA 2 cut(s) 411, 1116
Ecl136II GAGCTC 1 cut(s) 818
Eco24I GRGCYC 1 cut(s) 820
Eco31I GGTCTC 1 cut(s) 916
Eco32I GATATC 2 cut(s) 772, 958
Eco47I GGWCC 2 cut(s) 56, 1305
Eco47III AGCGCT 1 cut(s) 550
Eco53kI GAGCTC 1 cut(s) 818
Eco57I CTGAAG 1 cut(s) 740
Eco88I CYCGRG 3 cut(s) 599, 608, 1174
EcoICRI GAGCTC 1 cut(s) 818
EcoO109I RGGNCCY 1 cut(s) 1305
EcoRII CCWGG 3 cut(s) 531, 1281, 1301
EcoRV GATATC 2 cut(s) 772, 958
EcoT22I ATGCAT 1 cut(s) 193
EcoT38I GRGCYC 1 cut(s) 820
FaeI CATG 9 cut(s) 24, 103, 268, 336, 583, 596, 752, 854, 935
FaqI GGGAC 2 cut(s) 983, 1218
FatI CATG 9 cut(s) 20, 99, 264, 332, 579, 592, 748, 850, 931
FblI GTMKAC 1 cut(s) 636
Fnu4HI GCNGC 5 cut(s) 15, 18, 486, 746, 1183
FriOI GRGCYC 1 cut(s) 820
Fsp4HI GCNGC 5 cut(s) 15, 18, 486, 746, 1183
FspBI CTAG 3 cut(s) 108, 522, 813
GlaI GCGC 1 cut(s) 550
GluI GCNGC 5 cut(s) 15, 18, 486, 746, 1183
GsuI CTGGAG 1 cut(s) 810
HaeII RGCGCY 1 cut(s) 552
HapII CCGG 3 cut(s) 290, 600, 1213
HgaI GACGC 1 cut(s) 749
HhaI GCGC 1 cut(s) 551
Hin1I GRCGYC 1 cut(s) 972
Hin1II CATG 9 cut(s) 24, 103, 268, 336, 583, 596, 752, 854, 935
Hin6I GCGC 1 cut(s) 549
HinP1I GCGC 1 cut(s) 549
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HinfI GANTC 9 cut(s) 175, 466, 541, 604, 679, 869, 941, 1114, 1190
HpaII CCGG 3 cut(s) 290, 600, 1213
HphI GGTGA 1 cut(s) 1160
Hpy166II GTNNAC 7 cut(s) 229, 353, 637, 688, 841, 1082, 1238
Hpy188I TCNGA 5 cut(s) 834, 874, 1102, 1189, 1340
Hpy188III TCNNGA 6 cut(s) 59, 139, 172, 608, 764, 851
Hpy8I GTNNAC 7 cut(s) 229, 353, 637, 688, 841, 1082, 1238
HpyAV CCTTC 4 cut(s) 124, 798, 804, 1140
HpyCH4III ACNGT 2 cut(s) 248, 1155
HpyCH4IV ACGT 4 cut(s) 225, 355, 670, 972
HpyCH4V TGCA 7 cut(s) 20, 26, 182, 191, 505, 745, 1076
HpyF3I CTNAG 7 cut(s) 398, 468, 527, 552, 962, 1101, 1186
HpySE526I ACGT 4 cut(s) 225, 355, 670, 972
Hsp92I GRCGYC 1 cut(s) 972
Hsp92II CATG 9 cut(s) 24, 103, 268, 336, 583, 596, 752, 854, 935
HspAI GCGC 1 cut(s) 549
Kzo9I GATC 5 cut(s) 88, 103, 394, 557, 595
LmnI GCTCC 2 cut(s) 587, 823
Lsp1109I GCAGC 3 cut(s) 4, 472, 757
LweI GCATC 4 cut(s) 472, 505, 1063, 1174
MabI ACCWGGT 2 cut(s) 1281, 1301
MaeI CTAG 3 cut(s) 108, 522, 813
MaeII ACGT 4 cut(s) 225, 355, 670, 972
MaeIII GTNAC 1 cut(s) 761
MalI GATC 5 cut(s) 90, 105, 396, 559, 597
MboI GATC 5 cut(s) 88, 103, 394, 557, 595
MflI RGATCY 1 cut(s) 103
MhlI GDGCHC 3 cut(s) 138, 592, 820
MluCI AATT 5 cut(s) 80, 211, 411, 739, 1107
MlyI GAGTC 2 cut(s) 460, 673
Mph1103I ATGCAT 1 cut(s) 193
MroXI GAANNNNTTC 1 cut(s) 540
MseI TTAA 4 cut(s) 72, 203, 617, 731
MslI CAYNNNNRTG 2 cut(s) 855, 936
MspI CCGG 3 cut(s) 290, 600, 1213
MspR9I CCNGG 6 cut(s) 533, 600, 601, 1213, 1283, 1303
MvaI CCWGG 3 cut(s) 533, 1283, 1303
NciI CCSGG 3 cut(s) 600, 601, 1213
NdeII GATC 5 cut(s) 88, 103, 394, 557, 595
NlaIII CATG 9 cut(s) 24, 103, 268, 336, 583, 596, 752, 854, 935
NlaIV GGNNCC 2 cut(s) 105, 1217
NmeAIII GCCGAG 1 cut(s) 868
NmuCI GTSAC 1 cut(s) 761
NsiI ATGCAT 1 cut(s) 193
NspI RCATGY 3 cut(s) 24, 583, 752
PaeR7I CTCGAG 1 cut(s) 1174
PagI TCATGA 1 cut(s) 850
PcsI WCGNNNNNNNCGW 1 cut(s) 361
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 7 cut(s) 175, 541, 604, 869, 941, 1114, 1190
PflFI GACNNNGTC 1 cut(s) 266
PflMI CCANNNNNTGG 1 cut(s) 932
PkrI GCNGC 5 cut(s) 16, 19, 487, 747, 1184
PleI GAGTC 2 cut(s) 460, 673
PpsI GAGTC 2 cut(s) 460, 673
PpuMI RGGWCCY 1 cut(s) 1305
PshAI GACNNNNGTC 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 820
Psp5II RGGWCCY 1 cut(s) 1305
Psp6I CCWGG 3 cut(s) 531, 1281, 1301
PspGI CCWGG 3 cut(s) 531, 1281, 1301
PspN4I GGNNCC 2 cut(s) 105, 1217
PspPI GGNCC 2 cut(s) 56, 1305
PspPPI RGGWCCY 1 cut(s) 1305
PspXI VCTCGAGB 1 cut(s) 1174
PsuI RGATCY 1 cut(s) 103
PsyI GACNNNGTC 1 cut(s) 266
RsaI GTAC 3 cut(s) 230, 658, 930
RsaNI GTAC 3 cut(s) 229, 657, 929
RseI CAYNNNNRTG 2 cut(s) 855, 936
SacI GAGCTC 1 cut(s) 820
SaqAI TTAA 4 cut(s) 72, 203, 617, 731
SatI GCNGC 5 cut(s) 15, 18, 486, 746, 1183
Sau3AI GATC 5 cut(s) 88, 103, 394, 557, 595
Sau96I GGNCC 2 cut(s) 56, 1305
SchI GAGTC 2 cut(s) 460, 673
ScrFI CCNGG 6 cut(s) 533, 600, 601, 1213, 1283, 1303
SduI GDGCHC 3 cut(s) 138, 592, 820
SexAI ACCWGGT 2 cut(s) 1281, 1301
SfaNI GCATC 4 cut(s) 472, 505, 1063, 1174
Sfr274I CTCGAG 1 cut(s) 1174
SinI GGWCC 2 cut(s) 56, 1305
SlaI CTCGAG 1 cut(s) 1174
SmaI CCCGGG 1 cut(s) 601
SmiMI CAYNNNNRTG 2 cut(s) 855, 936
SmlI CTYRAG 3 cut(s) 137, 984, 1174
SmoI CTYRAG 3 cut(s) 137, 984, 1174
Sse9I AATT 5 cut(s) 80, 211, 411, 739, 1107
SsiI CCGC 8 cut(s) 14, 145, 422, 461, 1034, 1127, 1182, 1241
SspMI CTAG 3 cut(s) 108, 522, 813
SstI GAGCTC 1 cut(s) 820
StyD4I CCNGG 6 cut(s) 531, 598, 599, 1211, 1281, 1301
TaaI ACNGT 2 cut(s) 248, 1155
TaiI ACGT 4 cut(s) 228, 358, 673, 975
TaqI TCGA 4 cut(s) 364, 427, 1068, 1175
TasI AATT 5 cut(s) 80, 211, 411, 739, 1107
TatI WGTACW 1 cut(s) 928
TauI GCSGC 2 cut(s) 17, 1185
TfiI GAWTC 7 cut(s) 175, 541, 604, 869, 941, 1114, 1190
Tru1I TTAA 4 cut(s) 72, 203, 617, 731
Tru9I TTAA 4 cut(s) 72, 203, 617, 731
TseFI GTSAC 1 cut(s) 761
TseI GCWGC 3 cut(s) 17, 485, 745
Tsp45I GTSAC 1 cut(s) 761
TspDTI ATGAA 2 cut(s) 492, 873
TspGWI ACGGA 1 cut(s) 446
TspMI CCCGGG 1 cut(s) 599
Tth111I GACNNNGTC 1 cut(s) 266
Van91I CCANNNNNTGG 1 cut(s) 932
VpaK11BI GGWCC 2 cut(s) 56, 1305
XceI RCATGY 3 cut(s) 24, 583, 752
XhoI CTCGAG 1 cut(s) 1174
XmaI CCCGGG 1 cut(s) 599
XmiI GTMKAC 1 cut(s) 636
XmnI GAANNNNTTC 1 cut(s) 540
XspI CTAG 3 cut(s) 108, 522, 813
ZraI GACGTC 1 cut(s) 973
Zsp2I ATGCAT 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.