Prupe.8G010900_v2.0.a1

TOM1-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
874935 .. 883468
8534 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G010900.2

Sequence Viewer

Length: 1569 bp
ATGGCTGGTAATGCTGCGGCCTGTGCAGAGAGGGCAACAAGTGATATGTTGATTGGTCCAGACTGGGCAATAAACATTGAATTATGCGATATTATTAACATGGAGCCTGGGCAAGCAAAAGATGCCTTGAAGATACTCAAAAAGCGCCTGGGCAGTAAAAATCCGAAAATACAACTTCTGGCTCTTTTTGCATTGGAGACTGTGAGCAAGAATTGTGGTGAGAATGTTTTTCAGCAGATCGTTGAGCGTGATATCTTGCATGAAATGGTCAAAATAGTAAAGAAGAAGCCAGACTTGAATGTTAGGGAAAAGATACTAATTTTGATAGATACATGGCAAGAAGCTTTTGGAGGAGCAAGAGGAAGATATCCCCAATACTATGCGGCATATAATGAATTGAGGTCTGCGGGAGTTGAATTTCCACCACGAGAAGAGAACAGTGTACCACTCTTTACTCCGCCTCAGACCCAGCCAGTAGTTTCCCCTGTTGCAGTATATGATGATGCTGCTATTCAGGCTTCTCTTCAGTCTGATGCTTCAGGACTTAGCTTGCCAGAGATTCAAAATGCTCGAGGAATTGCAGATGTGTTGATGGAAATGCTTAATGCCTTGGATCCTAAGAATCCTGAGGGTCTGAAGGAAGAAGTGATTGTTGACCTTGTTGATCAGTGCCGTTCGTACCAAAAGCGCGTCATGCTTCTTGTGAATGAAACTGTCGATGAGGAACTTCTATGTCAGGGATTGGCTTTAAATGATAATCTGCAGCGTGTACTTTCTCGGCACGATGATATTGTGAAAGGAACAGCAACTGGAGTAAGAGCACCAGAATCTTCAGTTGTGCCACTTGTGAATGTGAACCATGAGGATGATGAGTCAGAGGATGAATTTGCCCAACTAGCTCACAGGTCATCAAGAGATAATTCACAGGGACCAGGCCAGAGATCAGCCAATGCCAGGACTGAACCTGTGCGACTAAGCCCACTTCTTCCTCCTCCACCATCTCCAAAAAGGCCAATCCCTACAGGTGCTGGCATGATTGATTATCTCAGTGGTGATACCTACAAATCTGAAGGATCCACTGCAACATCAGAATCCACATCTTTTGCAGCTCCAGTTCATTCCAGCTCAAATTCCACCTCTCGATTGACTCCACCATCACCCTCACCCCCATCTTCCCTAAACACGACTCCATCCCCTATATTCTCTGGAAAACCTGTATATGATGAACCGGCTCCTAGAAGCAAATCCATTGATGGGTTGCCTCCAGCTCCTTGGGATGCTCAGTCCCCAGGCAATCCTCAGTCTCCTGGAAATGGCAACTCTCCTGTCAGCCTTCCACCTCCACCTTCCAGGTATAATCAGAGACAACAGTTTTTTGAGCAACAAGGCTTTCCAGGCAGTGGATCCGGTTCATCTTATGACAGCTTAGTGGGACAGACTCAGAATCTCTCTCTTAATTCGTCTACCCCAACAAAACAAGTAAAACAGGAAGATGCTCTATTCAAAGATCTCGTTGATTTTGCAAAAGCCAAGTCATCTTCGTCTTCAAACCCCAATAGGTCATTTTGA

Protein Analysis

523

Amino Acids

56.48

Weight (kDa)

5.09

Isoelectric Point (pI)

58.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1400
AccI GTMKAC 1 cut(s) 1463
AccII CGCG 1 cut(s) 690
AciI CCGC 4 cut(s) 17, 383, 407, 458
AclWI GGATC 6 cut(s) 608, 621, 1068, 1081, 1398, 1411
AcsI RAATTY 3 cut(s) 416, 884, 1129
AcuI CTGAAG 5 cut(s) 509, 522, 656, 816, 1089
AfaI GTAC 3 cut(s) 444, 680, 771
AfiI CCNNNNNNNGG 4 cut(s) 954, 1254, 1313, 1400
AgsI TTSAA 7 cut(s) 80, 130, 298, 416, 563, 1504, 1548
AjnI CCWGG 8 cut(s) 106, 147, 931, 953, 1288, 1306, 1349, 1393
AluBI AGCT 7 cut(s) 344, 549, 899, 1109, 1125, 1268, 1425
AluI AGCT 7 cut(s) 344, 549, 899, 1109, 1125, 1268, 1425
Alw21I GWGCWC 1 cut(s) 823
Alw26I GTCTC 3 cut(s) 191, 1308, 1357
AlwI GGATC 6 cut(s) 608, 621, 1068, 1081, 1398, 1411
AlwNI CAGNNNCTG 2 cut(s) 809, 1028
Ama87I CYCGRG 1 cut(s) 570
AoxI GGCC 3 cut(s) 18, 934, 1010
ApeKI GCWGC 4 cut(s) 14, 506, 763, 1106
ApoI RAATTY 3 cut(s) 416, 884, 1129
ArsI GACNNNNNNTTYG 2 cut(s) 1517, 1549
AspLEI GCGC 2 cut(s) 147, 690
AspS9I GGNCC 2 cut(s) 56, 929
AsuHPI GGTGA 4 cut(s) 230, 1064, 1149, 1155
AvaI CYCGRG 1 cut(s) 570
AvaII GGWCC 2 cut(s) 56, 929
AxyI CCTNAGG 1 cut(s) 627
BamHI GGATCC 3 cut(s) 613, 1073, 1403
BauI CACGAG 1 cut(s) 426
BbsI GAAGAC 1 cut(s) 1536
Bbv12I GWGCWC 1 cut(s) 823
BbvI GCAGC 3 cut(s) 493, 775, 1118
BccI CCATC 6 cut(s) 586, 1006, 1162, 1177, 1198, 1247
BceAI ACGGC 1 cut(s) 657
BciT130I CCWGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
BclI TGATCA 1 cut(s) 664
BcoDI GTCTC 3 cut(s) 191, 1308, 1357
BfaI CTAG 2 cut(s) 896, 1236
BfmI CTRYAG 2 cut(s) 761, 1020
BfoI RGCGCY 1 cut(s) 148
BglII AGATCT 1 cut(s) 1507
BisI GCNGC 6 cut(s) 15, 18, 384, 507, 764, 1107
BlsI GCNGC 6 cut(s) 16, 19, 385, 508, 765, 1108
Bme1390I CCNGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
Bme18I GGWCC 2 cut(s) 56, 929
BmeT110I CYCGRG 1 cut(s) 570
BmgT120I GGNCC 2 cut(s) 56, 929
BmiI GGNNCC 6 cut(s) 105, 615, 930, 1075, 1233, 1405
BmrFI CCNGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
BmrI ACTGGG 1 cut(s) 73
BmsI GCATC 5 cut(s) 112, 493, 523, 1267, 1483
BmuI ACTGGG 1 cut(s) 73
BpiI GAAGAC 1 cut(s) 1536
BpmI CTGGAG 3 cut(s) 831, 1095, 1248
BsaJI CCNNGG 5 cut(s) 107, 148, 609, 1271, 1288
BsaWI WCCGGW 1 cut(s) 1406
Bsc4I CCNNNNNNNGG 4 cut(s) 954, 1254, 1313, 1400
Bse118I RCCGGY 1 cut(s) 1228
Bse1I ACTGG 4 cut(s) 68, 473, 814, 1112
Bse21I CCTNAGG 1 cut(s) 627
BseBI CCWGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
BseDI CCNNGG 5 cut(s) 107, 148, 609, 1271, 1288
BseGI GGATG 4 cut(s) 871, 886, 1190, 1282
BseLI CCNNNNNNNGG 4 cut(s) 954, 1254, 1313, 1400
BseMII CTCAG 6 cut(s) 476, 618, 1060, 1295, 1313, 1454
BseNI ACTGG 4 cut(s) 68, 473, 814, 1112
BseRI GAGGAG 2 cut(s) 366, 981
BseXI GCAGC 3 cut(s) 493, 775, 1118
BseYI CCCAGC 1 cut(s) 468
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 1 cut(s) 690
BshFI GGCC 3 cut(s) 20, 936, 1012
BsiHKAI GWGCWC 1 cut(s) 823
BsiHKCI CYCGRG 1 cut(s) 570
BsiSI CCGG 2 cut(s) 1229, 1407
BslFI GGGAC 3 cut(s) 942, 1270, 1446
BslI CCNNNNNNNGG 4 cut(s) 954, 1254, 1313, 1400
BsmAI GTCTC 3 cut(s) 191, 1308, 1357
BsmFI GGGAC 3 cut(s) 942, 1270, 1446
BsnI GGCC 3 cut(s) 20, 936, 1012
BsoBI CYCGRG 1 cut(s) 570
Bsp1286I GDGCHC 1 cut(s) 823
Bsp143I GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
BspACI CCGC 4 cut(s) 17, 383, 407, 458
BspANI GGCC 3 cut(s) 20, 936, 1012
BspCNI CTCAG 6 cut(s) 475, 619, 1059, 1294, 1312, 1453
BspFNI CGCG 1 cut(s) 690
BspLI GGNNCC 6 cut(s) 105, 615, 930, 1075, 1233, 1405
BspMAI CTGCAG 1 cut(s) 765
BspPI GGATC 6 cut(s) 608, 621, 1068, 1081, 1398, 1411
BsrFI RCCGGY 1 cut(s) 1228
BsrI ACTGG 4 cut(s) 68, 473, 814, 1112
BssAI RCCGGY 1 cut(s) 1228
BssECI CCNNGG 5 cut(s) 107, 148, 609, 1271, 1288
BssMI GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
BssSI CACGAG 1 cut(s) 426
BssT1I CCWWGG 2 cut(s) 609, 1271
Bst2BI CACGAG 1 cut(s) 426
Bst2UI CCWGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
Bst4CI ACNGT 4 cut(s) 202, 440, 715, 1371
Bst6I CTCTTC 2 cut(s) 426, 528
BstAPI GCANNNNNTGC 1 cut(s) 122
BstC8I GCNNGC 3 cut(s) 114, 551, 1030
BstF5I GGATG 4 cut(s) 871, 886, 1190, 1282
BstFNI CGCG 1 cut(s) 690
BstH2I RGCGCY 1 cut(s) 148
BstHHI GCGC 2 cut(s) 147, 690
BstKTI GATC 7 cut(s) 240, 616, 667, 944, 1076, 1406, 1510
BstMAI GTCTC 3 cut(s) 191, 1308, 1357
BstMBI GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
BstMWI GCNNNNNNNGC 9 cut(s) 11, 23, 32, 122, 188, 515, 694, 896, 1395
BstNI CCWGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
BstSCI CCNGG 8 cut(s) 106, 147, 931, 953, 1288, 1306, 1349, 1393
BstSFI CTRYAG 2 cut(s) 761, 1020
BstUI CGCG 1 cut(s) 690
BstV1I GCAGC 3 cut(s) 493, 775, 1118
BstV2I GAAGAC 1 cut(s) 1536
BstX2I RGATCY 4 cut(s) 613, 1073, 1403, 1507
BstXI CCANNNNNNTGG 1 cut(s) 1272
BstYI RGATCY 4 cut(s) 613, 1073, 1403, 1507
Bsu36I CCTNAGG 1 cut(s) 627
BsuRI GGCC 3 cut(s) 20, 936, 1012
BtsCI GGATG 4 cut(s) 871, 886, 1190, 1282
BtsI GCAGTG 2 cut(s) 1077, 1405
BtsIMutI CAGTG 5 cut(s) 445, 674, 1054, 1077, 1405
Cac8I GCNNGC 3 cut(s) 114, 551, 1030
CaiI CAGNNNCTG 2 cut(s) 809, 1028
CfoI GCGC 2 cut(s) 147, 690
Cfr10I RCCGGY 1 cut(s) 1228
Cfr13I GGNCC 2 cut(s) 56, 929
CseI GACGC 1 cut(s) 679
Csp6I GTAC 3 cut(s) 443, 679, 770
CspCI CAANNNNNGTGG 4 cut(s) 196, 231, 1084, 1119
CviAII CATG 6 cut(s) 100, 260, 333, 694, 860, 1033
CviQI GTAC 3 cut(s) 443, 679, 770
DpnI GATC 7 cut(s) 239, 615, 666, 943, 1075, 1405, 1509
DpnII GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
DraI TTTAAA 1 cut(s) 750
Eam1104I CTCTTC 2 cut(s) 426, 528
EarI CTCTTC 2 cut(s) 426, 528
EciI GGCGGA 1 cut(s) 447
Eco130I CCWWGG 2 cut(s) 609, 1271
Eco32I GATATC 2 cut(s) 253, 368
Eco47I GGWCC 2 cut(s) 56, 929
Eco57I CTGAAG 5 cut(s) 509, 522, 656, 816, 1089
Eco81I CCTNAGG 1 cut(s) 627
Eco88I CYCGRG 1 cut(s) 570
EcoRII CCWGG 8 cut(s) 106, 147, 931, 953, 1288, 1306, 1349, 1393
EcoRV GATATC 2 cut(s) 253, 368
EcoT14I CCWWGG 2 cut(s) 609, 1271
ErhI CCWWGG 2 cut(s) 609, 1271
FaeI CATG 6 cut(s) 103, 263, 336, 697, 863, 1036
FalI AAGNNNNNCTT 2 cut(s) 278, 310
FaqI GGGAC 3 cut(s) 942, 1270, 1446
FatI CATG 6 cut(s) 99, 259, 332, 693, 859, 1032
FauI CCCGC 1 cut(s) 400
FbaI TGATCA 1 cut(s) 664
FblI GTMKAC 1 cut(s) 1463
Fnu4HI GCNGC 6 cut(s) 15, 18, 384, 507, 764, 1107
FokI GGATG 4 cut(s) 878, 893, 1177, 1289
Fsp4HI GCNGC 6 cut(s) 15, 18, 384, 507, 764, 1107
FspBI CTAG 2 cut(s) 896, 1236
GlaI GCGC 2 cut(s) 146, 689
GluI GCNGC 6 cut(s) 15, 18, 384, 507, 764, 1107
GsaI CCCAGC 1 cut(s) 472
GsuI CTGGAG 3 cut(s) 831, 1095, 1248
HaeII RGCGCY 1 cut(s) 148
HaeIII GGCC 3 cut(s) 20, 936, 1012
HapII CCGG 2 cut(s) 1229, 1407
HgaI GACGC 1 cut(s) 679
HhaI GCGC 2 cut(s) 147, 690
Hin1II CATG 6 cut(s) 103, 263, 336, 697, 863, 1036
Hin6I GCGC 2 cut(s) 145, 688
HinP1I GCGC 2 cut(s) 145, 688
HincII GTYRAC 1 cut(s) 655
HindII GTYRAC 1 cut(s) 655
HindIII AAGCTT 1 cut(s) 342
HinfI GANTC 9 cut(s) 559, 622, 827, 872, 1091, 1147, 1186, 1438, 1444
HpaII CCGG 2 cut(s) 1229, 1407
HphI GGTGA 4 cut(s) 230, 1064, 1149, 1155
Hpy166II GTNNAC 5 cut(s) 443, 655, 770, 856, 1464
Hpy188I TCNGA 9 cut(s) 165, 465, 532, 636, 877, 1069, 1090, 1362, 1443
Hpy188III TCNNGA 6 cut(s) 59, 540, 626, 912, 1140, 1206
Hpy8I GTNNAC 5 cut(s) 443, 655, 770, 856, 1464
HpyAV CCTTC 4 cut(s) 631, 1064, 1343, 1356
HpyCH4III ACNGT 4 cut(s) 202, 440, 715, 1371
HpyCH4V TGCA 9 cut(s) 26, 191, 259, 491, 581, 763, 1082, 1106, 1523
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 23, 32, 122, 188, 515, 694, 896, 1395
Hsp92II CATG 6 cut(s) 103, 263, 336, 697, 863, 1036
HspAI GCGC 2 cut(s) 145, 688
Ksp22I TGATCA 1 cut(s) 664
Kzo9I GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
LmnI GCTCC 5 cut(s) 103, 353, 1114, 1237, 1273
Lsp1109I GCAGC 3 cut(s) 493, 775, 1118
LweI GCATC 5 cut(s) 112, 493, 523, 1267, 1483
MaeI CTAG 2 cut(s) 896, 1236
MalI GATC 7 cut(s) 239, 615, 666, 943, 1075, 1405, 1509
MboI GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
MflI RGATCY 4 cut(s) 613, 1073, 1403, 1507
MhlI GDGCHC 1 cut(s) 823
MlyI GAGTC 4 cut(s) 881, 1141, 1180, 1432
MseI TTAA 4 cut(s) 96, 603, 749, 1455
MslI CAYNNNNRTG 1 cut(s) 864
MspI CCGG 2 cut(s) 1229, 1407
MspR9I CCNGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
MvaI CCWGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
MvnI CGCG 1 cut(s) 690
MwoI GCNNNNNNNGC 9 cut(s) 11, 23, 32, 122, 188, 515, 694, 896, 1395
NdeII GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
NlaIII CATG 6 cut(s) 103, 263, 336, 697, 863, 1036
NlaIV GGNNCC 6 cut(s) 105, 615, 930, 1075, 1233, 1405
NmeAIII GCCGAG 1 cut(s) 757
PaeR7I CTCGAG 1 cut(s) 570
PfeI GAWTC 5 cut(s) 559, 622, 827, 1091, 1444
PflMI CCANNNNNTGG 1 cut(s) 1400
PfoI TCCNGGA 1 cut(s) 1306
PkrI GCNGC 6 cut(s) 16, 19, 385, 508, 765, 1108
PleI GAGTC 4 cut(s) 880, 1141, 1180, 1432
PpsI GAGTC 4 cut(s) 880, 1141, 1180, 1432
Psp6I CCWGG 8 cut(s) 106, 147, 931, 953, 1288, 1306, 1349, 1393
PspFI CCCAGC 1 cut(s) 468
PspGI CCWGG 8 cut(s) 106, 147, 931, 953, 1288, 1306, 1349, 1393
PspN4I GGNNCC 6 cut(s) 105, 615, 930, 1075, 1233, 1405
PspPI GGNCC 2 cut(s) 56, 929
PspXI VCTCGAGB 1 cut(s) 570
PstI CTGCAG 1 cut(s) 765
PstNI CAGNNNCTG 2 cut(s) 809, 1028
PsuI RGATCY 4 cut(s) 613, 1073, 1403, 1507
RsaI GTAC 3 cut(s) 444, 680, 771
RsaNI GTAC 3 cut(s) 443, 679, 770
RseI CAYNNNNRTG 1 cut(s) 864
SaqAI TTAA 4 cut(s) 96, 603, 749, 1455
SatI GCNGC 6 cut(s) 15, 18, 384, 507, 764, 1107
Sau3AI GATC 7 cut(s) 237, 613, 664, 941, 1073, 1403, 1507
Sau96I GGNCC 2 cut(s) 56, 929
SchI GAGTC 4 cut(s) 881, 1141, 1180, 1432
ScrFI CCNGG 8 cut(s) 108, 149, 933, 955, 1290, 1308, 1351, 1395
SduI GDGCHC 1 cut(s) 823
SfaNI GCATC 5 cut(s) 112, 493, 523, 1267, 1483
SfcI CTRYAG 2 cut(s) 761, 1020
Sfr274I CTCGAG 1 cut(s) 570
SinI GGWCC 2 cut(s) 56, 929
SlaI CTCGAG 1 cut(s) 570
SmiMI CAYNNNNRTG 1 cut(s) 864
SmlI CTYRAG 1 cut(s) 570
SmoI CTYRAG 1 cut(s) 570
SsiI CCGC 4 cut(s) 17, 383, 407, 458
SspMI CTAG 2 cut(s) 896, 1236
StyD4I CCNGG 8 cut(s) 106, 147, 931, 953, 1288, 1306, 1349, 1393
StyI CCWWGG 2 cut(s) 609, 1271
TaaI ACNGT 4 cut(s) 202, 440, 715, 1371
TaqI TCGA 3 cut(s) 571, 717, 1141
TatI WGTACW 1 cut(s) 769
TauI GCSGC 2 cut(s) 20, 386
TfiI GAWTC 5 cut(s) 559, 622, 827, 1091, 1444
Tru1I TTAA 4 cut(s) 96, 603, 749, 1455
Tru9I TTAA 4 cut(s) 96, 603, 749, 1455
TscAI CASTG 5 cut(s) 445, 674, 1054, 1084, 1405
TseI GCWGC 4 cut(s) 14, 506, 763, 1106
TspDTI ATGAA 7 cut(s) 276, 408, 723, 897, 1106, 1239, 1401
TspRI CASTG 5 cut(s) 445, 674, 1054, 1084, 1405
Van91I CCANNNNNTGG 1 cut(s) 1400
VpaK11BI GGWCC 2 cut(s) 56, 929
XapI RAATTY 3 cut(s) 416, 884, 1129
XhoI CTCGAG 1 cut(s) 570
XmiI GTMKAC 1 cut(s) 1463
XspI CTAG 2 cut(s) 896, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.