NHO1, GLI1 NHO1 (nonhost resistance to P. s. phaseolicola 1)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80460 AT1G80460 |
| fragaria_vesca | FvH4_6g29330 |
| malus_domestica | MD09G1222300.v1.1 MD17G1215600.v1.1 |
| prunus_persica | Prupe.3G091800_v2.0.a1 |
| pyrus_communis | pycom17g22010 pycom808g00550 |
| rosa_chinensis | RchiOBHm_Chr2g0134571 |
| rosa_laevigata | RLG00000019403 RLG00000019410 |
| rosa_multiflora | Rmu_sc0002792.1_g000034 Rmu_sc0004670.1_g000014 Rmu_ssc0000438.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00110000 |
| rosa_rugosa | Rorug02G0318500 Rorug02G0318600 Rorug06G0124200 |
| rosa_samantha | Rh2AG374800 Rh2BG376400 Rh2CG355000 Rh6AG233000 Rh6DG231400 |
| rosa_wichuraiana | Rw2G030210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1220 |
| AatII | GACGTC | 1 cut(s) | 1206 |
| Acc36I | ACCTGC | 1 cut(s) | 1220 |
| AccB1I | GGYRCC | 1 cut(s) | 1289 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 397 |
| AccI | GTMKAC | 1 cut(s) | 228 |
| AciI | CCGC | 5 cut(s) | 408, 549, 561, 1479, 1529 |
| AclWI | GGATC | 3 cut(s) | 34, 143, 381 |
| AcvI | CACGTG | 1 cut(s) | 1115 |
| AcyI | GRCGYC | 2 cut(s) | 1203, 1514 |
| AdeI | CACNNNGTG | 1 cut(s) | 1118 |
| AfaI | GTAC | 3 cut(s) | 340, 817, 1061 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 131, 354, 397, 627, 734 |
| AgsI | TTSAA | 3 cut(s) | 241, 646, 1078 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 224 |
| AjnI | CCWGG | 2 cut(s) | 633, 1191 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 954, 986 |
| Alw26I | GTCTC | 5 cut(s) | 263, 352, 978, 1158, 1361 |
| AlwI | GGATC | 3 cut(s) | 34, 143, 381 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 965 |
| Ama87I | CYCGRG | 2 cut(s) | 376, 1164 |
| AoxI | GGCC | 6 cut(s) | 243, 298, 562, 725, 897, 1352 |
| ApeKI | GCWGC | 6 cut(s) | 445, 773, 965, 1031, 1385, 1394 |
| AspLEI | GCGC | 1 cut(s) | 1010 |
| AspS9I | GGNCC | 2 cut(s) | 631, 911 |
| AsuC2I | CCSGG | 1 cut(s) | 735 |
| AsuHPI | GGTGA | 6 cut(s) | 574, 773, 1135, 1207, 1244, 1360 |
| AvaI | CYCGRG | 2 cut(s) | 376, 1164 |
| AvaII | GGWCC | 2 cut(s) | 631, 911 |
| BanI | GGYRCC | 1 cut(s) | 1289 |
| BauI | CACGAG | 1 cut(s) | 1135 |
| BbrPI | CACGTG | 1 cut(s) | 1115 |
| BbsI | GAAGAC | 3 cut(s) | 653, 875, 1113 |
| BbvI | GCAGC | 6 cut(s) | 432, 760, 952, 1043, 1397, 1406 |
| BccI | CCATC | 7 cut(s) | 129, 209, 322, 356, 512, 1277, 1327 |
| BceAI | ACGGC | 1 cut(s) | 1096 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 59, 93 |
| BciT130I | CCWGG | 2 cut(s) | 635, 1193 |
| BclI | TGATCA | 1 cut(s) | 763 |
| BcnI | CCSGG | 1 cut(s) | 735 |
| BcoDI | GTCTC | 5 cut(s) | 263, 352, 978, 1158, 1361 |
| BfaI | CTAG | 1 cut(s) | 362 |
| BfmI | CTRYAG | 2 cut(s) | 352, 1047 |
| BfoI | RGCGCY | 1 cut(s) | 1011 |
| BfuAI | ACCTGC | 1 cut(s) | 1220 |
| BglII | AGATCT | 1 cut(s) | 711 |
| BisI | GCNGC | 8 cut(s) | 409, 446, 562, 774, 966, 1032, 1386, 1395 |
| BlsI | GCNGC | 8 cut(s) | 410, 447, 563, 775, 967, 1033, 1387, 1396 |
| BmcAI | AGTACT | 1 cut(s) | 817 |
| Bme1390I | CCNGG | 3 cut(s) | 635, 735, 1193 |
| Bme18I | GGWCC | 2 cut(s) | 631, 911 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 224 |
| BmeT110I | CYCGRG | 2 cut(s) | 376, 1164 |
| BmgT120I | GGNCC | 2 cut(s) | 631, 911 |
| BmiI | GGNNCC | 4 cut(s) | 43, 632, 1243, 1291 |
| BmrFI | CCNGG | 3 cut(s) | 635, 735, 1193 |
| BmsI | GCATC | 5 cut(s) | 67, 322, 490, 1216, 1302 |
| BpiI | GAAGAC | 3 cut(s) | 653, 875, 1113 |
| BpmI | CTGGAG | 1 cut(s) | 1196 |
| BpuEI | CTTGAG | 2 cut(s) | 643, 900 |
| BpuMI | CCSGG | 1 cut(s) | 735 |
| Bsa29I | ATCGAT | 1 cut(s) | 33 |
| BsaAI | YACGTR | 1 cut(s) | 1115 |
| BsaHI | GRCGYC | 2 cut(s) | 1203, 1514 |
| BsaJI | CCNNGG | 2 cut(s) | 991, 1094 |
| BsaWI | WCCGGW | 2 cut(s) | 851, 1342 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 954, 984, 1169, 1199 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 131, 354, 397, 627, 734 |
| Bse118I | RCCGGY | 1 cut(s) | 661 |
| Bse1I | ACTGG | 4 cut(s) | 168, 301, 550, 1355 |
| Bse3DI | GCAATG | 3 cut(s) | 183, 1041, 1158 |
| BseBI | CCWGG | 2 cut(s) | 635, 1193 |
| BseCI | ATCGAT | 1 cut(s) | 33 |
| BseDI | CCNNGG | 2 cut(s) | 991, 1094 |
| BseGI | GGATG | 6 cut(s) | 140, 333, 337, 475, 505, 758 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 131, 354, 397, 627, 734 |
| BseMI | GCAATG | 3 cut(s) | 183, 1041, 1158 |
| BseMII | CTCAG | 3 cut(s) | 128, 1005, 1288 |
| BseNI | ACTGG | 4 cut(s) | 168, 301, 550, 1355 |
| BseRI | GAGGAG | 1 cut(s) | 1068 |
| BseXI | GCAGC | 6 cut(s) | 432, 760, 952, 1043, 1397, 1406 |
| BseYI | CCCAGC | 1 cut(s) | 627 |
| BshFI | GGCC | 6 cut(s) | 245, 300, 564, 727, 899, 1354 |
| BshNI | GGYRCC | 1 cut(s) | 1289 |
| BshVI | ATCGAT | 1 cut(s) | 33 |
| BsiHKCI | CYCGRG | 2 cut(s) | 376, 1164 |
| BsiSI | CCGG | 4 cut(s) | 662, 735, 852, 1343 |
| BslFI | GGGAC | 1 cut(s) | 644 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 131, 354, 397, 627, 734 |
| BsmAI | GTCTC | 5 cut(s) | 263, 352, 978, 1158, 1361 |
| BsmFI | GGGAC | 1 cut(s) | 644 |
| BsnI | GGCC | 6 cut(s) | 245, 300, 564, 727, 899, 1354 |
| BsoBI | CYCGRG | 2 cut(s) | 376, 1164 |
| BspACI | CCGC | 5 cut(s) | 408, 549, 561, 1479, 1529 |
| BspANI | GGCC | 6 cut(s) | 245, 300, 564, 727, 899, 1354 |
| BspCNI | CTCAG | 3 cut(s) | 127, 1006, 1287 |
| BspDI | ATCGAT | 1 cut(s) | 33 |
| BspHI | TCATGA | 1 cut(s) | 606 |
| BspLI | GGNNCC | 4 cut(s) | 43, 632, 1243, 1291 |
| BspMAI | CTGCAG | 1 cut(s) | 356 |
| BspMI | ACCTGC | 1 cut(s) | 1220 |
| BspPI | GGATC | 3 cut(s) | 34, 143, 381 |
| BspT107I | GGYRCC | 1 cut(s) | 1289 |
| BsrDI | GCAATG | 3 cut(s) | 183, 1041, 1158 |
| BsrFI | RCCGGY | 1 cut(s) | 661 |
| BsrI | ACTGG | 4 cut(s) | 168, 301, 550, 1355 |
| BssAI | RCCGGY | 1 cut(s) | 661 |
| BssECI | CCNNGG | 2 cut(s) | 991, 1094 |
| BssNI | GRCGYC | 2 cut(s) | 1203, 1514 |
| BssSI | CACGAG | 1 cut(s) | 1135 |
| BssT1I | CCWWGG | 2 cut(s) | 991, 1094 |
| Bst2BI | CACGAG | 1 cut(s) | 1135 |
| Bst2UI | CCWGG | 2 cut(s) | 635, 1193 |
| Bst4CI | ACNGT | 2 cut(s) | 233, 277 |
| Bst6I | CTCTTC | 1 cut(s) | 806 |
| BstACI | GRCGYC | 2 cut(s) | 1203, 1514 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 965, 1391 |
| BstBAI | YACGTR | 1 cut(s) | 1115 |
| BstC8I | GCNNGC | 6 cut(s) | 413, 725, 771, 789, 793, 1071 |
| BstDEI | CTNAG | 4 cut(s) | 114, 980, 1014, 1274 |
| BstF5I | GGATG | 6 cut(s) | 140, 333, 337, 475, 505, 758 |
| BstH2I | RGCGCY | 1 cut(s) | 1011 |
| BstHHI | GCGC | 1 cut(s) | 1010 |
| BstMAI | GTCTC | 5 cut(s) | 263, 352, 978, 1158, 1361 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 351, 451, 801, 965, 1382, 1391, 1394, 1403 |
| BstNI | CCWGG | 2 cut(s) | 635, 1193 |
| BstNSI | RCATGY | 2 cut(s) | 773, 1186 |
| BstSCI | CCNGG | 3 cut(s) | 633, 733, 1191 |
| BstSFI | CTRYAG | 2 cut(s) | 352, 1047 |
| BstV1I | GCAGC | 6 cut(s) | 432, 760, 952, 1043, 1397, 1406 |
| BstV2I | GAAGAC | 3 cut(s) | 653, 875, 1113 |
| BstX2I | RGATCY | 2 cut(s) | 386, 711 |
| BstYI | RGATCY | 2 cut(s) | 386, 711 |
| Bsu15I | ATCGAT | 1 cut(s) | 33 |
| BsuRI | GGCC | 6 cut(s) | 245, 300, 564, 727, 899, 1354 |
| BsuTUI | ATCGAT | 1 cut(s) | 33 |
| BtgZI | GCGATG | 1 cut(s) | 791 |
| BtsCI | GGATG | 6 cut(s) | 140, 333, 337, 475, 505, 758 |
| BtsI | GCAGTG | 1 cut(s) | 207 |
| BtsIMutI | CAGTG | 5 cut(s) | 207, 294, 573, 980, 1362 |
| BveI | ACCTGC | 1 cut(s) | 1220 |
| Cac8I | GCNNGC | 6 cut(s) | 413, 725, 771, 789, 793, 1071 |
| CaiI | CAGNNNCTG | 1 cut(s) | 965 |
| CciI | TCATGA | 1 cut(s) | 606 |
| CfoI | GCGC | 1 cut(s) | 1010 |
| Cfr10I | RCCGGY | 1 cut(s) | 661 |
| Cfr13I | GGNCC | 2 cut(s) | 631, 911 |
| ClaI | ATCGAT | 1 cut(s) | 33 |
| CseI | GACGC | 3 cut(s) | 491, 1118, 1503 |
| Csp6I | GTAC | 3 cut(s) | 339, 816, 1060 |
| CviQI | GTAC | 3 cut(s) | 339, 816, 1060 |
| DdeI | CTNAG | 4 cut(s) | 114, 980, 1014, 1274 |
| DraIII | CACNNNGTG | 1 cut(s) | 1118 |
| DriI | GACNNNNNGTC | 1 cut(s) | 224 |
| Eam1104I | CTCTTC | 1 cut(s) | 806 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 224 |
| EarI | CTCTTC | 1 cut(s) | 806 |
| Eco130I | CCWWGG | 2 cut(s) | 991, 1094 |
| Eco47I | GGWCC | 2 cut(s) | 631, 911 |
| Eco72I | CACGTG | 1 cut(s) | 1115 |
| Eco88I | CYCGRG | 2 cut(s) | 376, 1164 |
| EcoRII | CCWGG | 2 cut(s) | 633, 1191 |
| EcoT14I | CCWWGG | 2 cut(s) | 991, 1094 |
| EcoT22I | ATGCAT | 1 cut(s) | 937 |
| ErhI | CCWWGG | 2 cut(s) | 991, 1094 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1191, 1223 |
| FaqI | GGGAC | 1 cut(s) | 644 |
| FauI | CCCGC | 1 cut(s) | 1486 |
| FbaI | TGATCA | 1 cut(s) | 763 |
| FblI | GTMKAC | 1 cut(s) | 228 |
| Fnu4HI | GCNGC | 8 cut(s) | 409, 446, 562, 774, 966, 1032, 1386, 1395 |
| FokI | GGATG | 6 cut(s) | 147, 340, 344, 482, 512, 765 |
| Fsp4HI | GCNGC | 8 cut(s) | 409, 446, 562, 774, 966, 1032, 1386, 1395 |
| FspBI | CTAG | 1 cut(s) | 362 |
| GlaI | GCGC | 1 cut(s) | 1009 |
| GluI | GCNGC | 8 cut(s) | 409, 446, 562, 774, 966, 1032, 1386, 1395 |
| GsaI | CCCAGC | 1 cut(s) | 631 |
| GsuI | CTGGAG | 1 cut(s) | 1196 |
| HaeII | RGCGCY | 1 cut(s) | 1011 |
| HaeIII | GGCC | 6 cut(s) | 245, 300, 564, 727, 899, 1354 |
| HapII | CCGG | 4 cut(s) | 662, 735, 852, 1343 |
| HgaI | GACGC | 3 cut(s) | 491, 1118, 1503 |
| HhaI | GCGC | 1 cut(s) | 1010 |
| Hin1I | GRCGYC | 2 cut(s) | 1203, 1514 |
| Hin6I | GCGC | 1 cut(s) | 1008 |
| HinP1I | GCGC | 1 cut(s) | 1008 |
| HincII | GTYRAC | 1 cut(s) | 229 |
| HindII | GTYRAC | 1 cut(s) | 229 |
| HindIII | AAGCTT | 1 cut(s) | 789 |
| HinfI | GANTC | 9 cut(s) | 57, 401, 1043, 1131, 1211, 1318, 1413, 1439, 1494 |
| HpaII | CCGG | 4 cut(s) | 662, 735, 852, 1343 |
| HphI | GGTGA | 6 cut(s) | 574, 773, 1135, 1207, 1244, 1360 |
| Hpy166II | GTNNAC | 5 cut(s) | 111, 229, 1060, 1143, 1360 |
| Hpy188I | TCNGA | 8 cut(s) | 264, 697, 888, 1015, 1277, 1311, 1332, 1475 |
| Hpy8I | GTNNAC | 5 cut(s) | 111, 229, 1060, 1143, 1360 |
| Hpy99I | CGWCG | 2 cut(s) | 230, 233 |
| HpyAV | CCTTC | 7 cut(s) | 235, 311, 575, 1316, 1414, 1444, 1484 |
| HpyCH4III | ACNGT | 2 cut(s) | 233, 277 |
| HpyCH4IV | ACGT | 4 cut(s) | 225, 893, 1114, 1203 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 351, 451, 801, 965, 1382, 1391, 1394, 1403 |
| HpyF3I | CTNAG | 4 cut(s) | 114, 980, 1014, 1274 |
| HpySE526I | ACGT | 4 cut(s) | 225, 893, 1114, 1203 |
| Hsp92I | GRCGYC | 2 cut(s) | 1203, 1514 |
| HspAI | GCGC | 1 cut(s) | 1008 |
| Ksp22I | TGATCA | 1 cut(s) | 763 |
| LmnI | GCTCC | 5 cut(s) | 285, 350, 962, 1096, 1382 |
| Lsp1109I | GCAGC | 6 cut(s) | 432, 760, 952, 1043, 1397, 1406 |
| LweI | GCATC | 5 cut(s) | 67, 322, 490, 1216, 1302 |
| MaeI | CTAG | 1 cut(s) | 362 |
| MaeII | ACGT | 4 cut(s) | 225, 893, 1114, 1203 |
| MaeIII | GTNAC | 2 cut(s) | 571, 580 |
| MflI | RGATCY | 2 cut(s) | 386, 711 |
| MluCI | AATT | 1 cut(s) | 691 |
| MlyI | GAGTC | 3 cut(s) | 410, 1205, 1448 |
| Mph1103I | ATGCAT | 1 cut(s) | 937 |
| MseI | TTAA | 1 cut(s) | 1248 |
| MspA1I | CMGCKG | 1 cut(s) | 1397 |
| MspI | CCGG | 4 cut(s) | 662, 735, 852, 1343 |
| MspR9I | CCNGG | 3 cut(s) | 635, 735, 1193 |
| MvaI | CCWGG | 2 cut(s) | 635, 1193 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 351, 451, 801, 965, 1382, 1391, 1394, 1403 |
| NciI | CCSGG | 1 cut(s) | 735 |
| NlaIV | GGNNCC | 4 cut(s) | 43, 632, 1243, 1291 |
| NmuCI | GTSAC | 2 cut(s) | 571, 580 |
| NsiI | ATGCAT | 1 cut(s) | 937 |
| NspI | RCATGY | 2 cut(s) | 773, 1186 |
| PaeI | GCATGC | 1 cut(s) | 773 |
| PagI | TCATGA | 1 cut(s) | 606 |
| PaqCI | CACCTGC | 1 cut(s) | 1220 |
| PfeI | GAWTC | 6 cut(s) | 57, 1043, 1131, 1318, 1413, 1494 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 397 |
| PkrI | GCNGC | 8 cut(s) | 410, 447, 563, 775, 967, 1033, 1387, 1396 |
| PleI | GAGTC | 3 cut(s) | 409, 1205, 1447 |
| PmaCI | CACGTG | 1 cut(s) | 1115 |
| PmlI | CACGTG | 1 cut(s) | 1115 |
| PpsI | GAGTC | 3 cut(s) | 409, 1205, 1447 |
| Ppu21I | YACGTR | 1 cut(s) | 1115 |
| Psp6I | CCWGG | 2 cut(s) | 633, 1191 |
| PspCI | CACGTG | 1 cut(s) | 1115 |
| PspFI | CCCAGC | 1 cut(s) | 627 |
| PspGI | CCWGG | 2 cut(s) | 633, 1191 |
| PspN4I | GGNNCC | 4 cut(s) | 43, 632, 1243, 1291 |
| PspPI | GGNCC | 2 cut(s) | 631, 911 |
| PstI | CTGCAG | 1 cut(s) | 356 |
| PstNI | CAGNNNCTG | 1 cut(s) | 965 |
| PsuI | RGATCY | 2 cut(s) | 386, 711 |
| PvuII | CAGCTG | 1 cut(s) | 1397 |
| RsaI | GTAC | 3 cut(s) | 340, 817, 1061 |
| RsaNI | GTAC | 3 cut(s) | 339, 816, 1060 |
| SalI | GTCGAC | 1 cut(s) | 227 |
| SaqAI | TTAA | 1 cut(s) | 1248 |
| SatI | GCNGC | 8 cut(s) | 409, 446, 562, 774, 966, 1032, 1386, 1395 |
| Sau96I | GGNCC | 2 cut(s) | 631, 911 |
| ScaI | AGTACT | 1 cut(s) | 817 |
| SchI | GAGTC | 3 cut(s) | 410, 1205, 1448 |
| ScrFI | CCNGG | 3 cut(s) | 635, 735, 1193 |
| SfaNI | GCATC | 5 cut(s) | 67, 322, 490, 1216, 1302 |
| SfcI | CTRYAG | 2 cut(s) | 352, 1047 |
| SgrDI | CGTCGACG | 1 cut(s) | 227 |
| SinI | GGWCC | 2 cut(s) | 631, 911 |
| SmlI | CTYRAG | 2 cut(s) | 622, 915 |
| SmoI | CTYRAG | 2 cut(s) | 622, 915 |
| SphI | GCATGC | 1 cut(s) | 773 |
| Sse9I | AATT | 1 cut(s) | 691 |
| SsiI | CCGC | 5 cut(s) | 408, 549, 561, 1479, 1529 |
| SspMI | CTAG | 1 cut(s) | 362 |
| StyD4I | CCNGG | 3 cut(s) | 633, 733, 1191 |
| StyI | CCWWGG | 2 cut(s) | 991, 1094 |
| TaaI | ACNGT | 2 cut(s) | 233, 277 |
| TaiI | ACGT | 4 cut(s) | 228, 896, 1117, 1206 |
| TaqI | TCGA | 8 cut(s) | 33, 105, 198, 228, 519, 947, 1020, 1437 |
| TaqII | GACCGA | 1 cut(s) | 899 |
| TasI | AATT | 1 cut(s) | 691 |
| TatI | WGTACW | 2 cut(s) | 815, 1059 |
| TauI | GCSGC | 2 cut(s) | 411, 564 |
| TfiI | GAWTC | 6 cut(s) | 57, 1043, 1131, 1318, 1413, 1494 |
| Tru1I | TTAA | 1 cut(s) | 1248 |
| Tru9I | TTAA | 1 cut(s) | 1248 |
| TscAI | CASTG | 5 cut(s) | 214, 301, 580, 980, 1362 |
| TseFI | GTSAC | 2 cut(s) | 571, 580 |
| TseI | GCWGC | 6 cut(s) | 445, 773, 965, 1031, 1385, 1394 |
| Tsp45I | GTSAC | 2 cut(s) | 571, 580 |
| TspDTI | ATGAA | 6 cut(s) | 49, 455, 557, 623, 826, 1232 |
| TspGWI | ACGGA | 1 cut(s) | 610 |
| TspRI | CASTG | 5 cut(s) | 214, 301, 580, 980, 1362 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 397 |
| VpaK11BI | GGWCC | 2 cut(s) | 631, 911 |
| XceI | RCATGY | 2 cut(s) | 773, 1186 |
| XmiI | GTMKAC | 1 cut(s) | 228 |
| XspI | CTAG | 1 cut(s) | 362 |
| ZraI | GACGTC | 1 cut(s) | 1204 |
| ZrmI | AGTACT | 1 cut(s) | 817 |
| Zsp2I | ATGCAT | 1 cut(s) | 937 |