AT1G80460

NHO1, GLI1 NHO1 (nonhost resistance to P. s. phaseolicola 1)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
30246683 .. 30249337
2655 bp
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UTR
Exon/CDS
Intron
AT1G80460.1

Sequence Viewer

Length: 1569 bp
ATGGCAAAAGAAAATGGATTTATAGGATCAATCGATCAAGGAACCACCAGCACCAGATTCATCATTTACGACCACGATGCTCGTCCTGTTGCTTCTCATCAAGTCGAGTTCACTCAGTTCTATCCCGAAGCTGGATGGGTGGAACACGATCCAATGGAGATACTGGAAAGTGTGAAAGTGTGCATTGCAAAGGCTCTCGACAAAGCCACTGCCGATGGACACAACGTCGACGGTGGCTTGAAGGCCATTGGGCTTACAGATCAGAGAGAGACTACTGTTGTTTGGAGCAAATCCACTGGCCTTCCTCTCCACAAGGCTATTGTCTGGATGGATGCTCGTACCAGCTCCATCTGCAGGAGACTAGAGAAAGAACTCTCGGGAGGAAGATCCCATTTTGTGGAGTCTTGCGGCTTGCCAATAAGCACATACTTCTCTGCCATGAAGCTGCTTTGGCTCATGGAGAATGTGGATGATGTCAAAGACGCTATCAAGAAAGGGGATGCCATCTTTGGCACTATCGACACATGGTTGATCTGGAACATGACTGGCGGTATCAATGGCGGCCTTCATGTCACTGATGTCACCAATGCTTCACGGACAATGCTCATGAACCTCAAAACCTTGAGCTGGGACCAGGACACTTTGAAGACACTTGGCATACCGGCTGAAATCTTGCCCAAGATTGTCAGCAATTCAGAAGTGATTGGAGAGATCTGCAAAGGCTGGCCTATTCCCGGTATCAAGATTGCTGGATGTCTTGGTGATCAGCATGCTGCGATGTTGGGGCAAGCTTGCAGAAAAGGCGAGGCGAAGAGTACTTATGGCACAGGTGCTTTCATTCTTCTCAACACCGGAGAAGTGCCAATCAAATCAGGTCATGGTCTTCTGACCACGTTGGCCTACAAGCTCGGTCCTCAAGCACAGACAAACTATGCATTGGAGGGTTCGATTGCCATAGCAGGAGCTGCTGTTCAGTGGCTTAGAGACAGCCTTGGGATAATCAAAAGCGCCTCTGAGATCGAAGATTTGGCAGCAATGGTAGATTCTACAGGAGGAGTGTACTTTGTGCCAGCGTTCAACGGCTTGTTTGCTCCTTGGTGGAGAGAAGACGCACGTGGTGTGTGCATTGGAATCACGAGGTTCACCAACAAGTCTCACATTGCTCGGGCTGTGCTGGAGAGCATGTGTTTCCAGGTGAAAGACGTCCTTGACTCCATGAACAAAGATGCAGGTGAAAAGGGTTCCCTTAATAACGGGAAAGGGGAGTTCTTGCTCAGAGTTGATGGTGGTGCCACAGCTAACAACCTTCTGATGCAGATTCAGGCTGATCTGATGGGAAGTCCGGTGGTGAGGCCAGTGGACATAGAGACAACAGCATTAGGAGCAGCCTATGCAGCTGGATTAGCTGTGGGATTCTGGAAGGAAGCAGACATATTCGAGTCGGGAGAGAAGGCGAAGAACTCCAAAGTTTTCAGACCCGCTATGGAAGAAGGAATCAGGAAGAAGAAAGTGGCGTCTTGGTGCAAAGCGGTGGAAAGAACATTTGATCTCGCTGACCTCTCTATCTAA

Protein Analysis

522

Amino Acids

56.44

Weight (kDa)

5.88

Isoelectric Point (pI)

25.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_N PF00370 8 - 262 2.4e-66 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C PF02782 271 - 469 1.8e-42 FGGY family of carbohydrate kinases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1220
AatII GACGTC 1 cut(s) 1206
Acc36I ACCTGC 1 cut(s) 1220
AccB1I GGYRCC 1 cut(s) 1289
AccB7I CCANNNNNTGG 1 cut(s) 397
AccI GTMKAC 1 cut(s) 228
AciI CCGC 5 cut(s) 408, 549, 561, 1479, 1529
AclWI GGATC 3 cut(s) 34, 143, 381
AcvI CACGTG 1 cut(s) 1115
AcyI GRCGYC 2 cut(s) 1203, 1514
AdeI CACNNNGTG 1 cut(s) 1118
AfaI GTAC 3 cut(s) 340, 817, 1061
AfiI CCNNNNNNNGG 5 cut(s) 131, 354, 397, 627, 734
AgsI TTSAA 3 cut(s) 241, 646, 1078
AhdI GACNNNNNGTC 1 cut(s) 224
AjnI CCWGG 2 cut(s) 633, 1191
AloI GAACNNNNNNTCC 2 cut(s) 954, 986
Alw26I GTCTC 5 cut(s) 263, 352, 978, 1158, 1361
AlwI GGATC 3 cut(s) 34, 143, 381
AlwNI CAGNNNCTG 1 cut(s) 965
Ama87I CYCGRG 2 cut(s) 376, 1164
AoxI GGCC 6 cut(s) 243, 298, 562, 725, 897, 1352
ApeKI GCWGC 6 cut(s) 445, 773, 965, 1031, 1385, 1394
AspLEI GCGC 1 cut(s) 1010
AspS9I GGNCC 2 cut(s) 631, 911
AsuC2I CCSGG 1 cut(s) 735
AsuHPI GGTGA 6 cut(s) 574, 773, 1135, 1207, 1244, 1360
AvaI CYCGRG 2 cut(s) 376, 1164
AvaII GGWCC 2 cut(s) 631, 911
BanI GGYRCC 1 cut(s) 1289
BauI CACGAG 1 cut(s) 1135
BbrPI CACGTG 1 cut(s) 1115
BbsI GAAGAC 3 cut(s) 653, 875, 1113
BbvI GCAGC 6 cut(s) 432, 760, 952, 1043, 1397, 1406
BccI CCATC 7 cut(s) 129, 209, 322, 356, 512, 1277, 1327
BceAI ACGGC 1 cut(s) 1096
BcgI CGANNNNNNTGC 2 cut(s) 59, 93
BciT130I CCWGG 2 cut(s) 635, 1193
BclI TGATCA 1 cut(s) 763
BcnI CCSGG 1 cut(s) 735
BcoDI GTCTC 5 cut(s) 263, 352, 978, 1158, 1361
BfaI CTAG 1 cut(s) 362
BfmI CTRYAG 2 cut(s) 352, 1047
BfoI RGCGCY 1 cut(s) 1011
BfuAI ACCTGC 1 cut(s) 1220
BglII AGATCT 1 cut(s) 711
BisI GCNGC 8 cut(s) 409, 446, 562, 774, 966, 1032, 1386, 1395
BlsI GCNGC 8 cut(s) 410, 447, 563, 775, 967, 1033, 1387, 1396
BmcAI AGTACT 1 cut(s) 817
Bme1390I CCNGG 3 cut(s) 635, 735, 1193
Bme18I GGWCC 2 cut(s) 631, 911
BmeRI GACNNNNNGTC 1 cut(s) 224
BmeT110I CYCGRG 2 cut(s) 376, 1164
BmgT120I GGNCC 2 cut(s) 631, 911
BmiI GGNNCC 4 cut(s) 43, 632, 1243, 1291
BmrFI CCNGG 3 cut(s) 635, 735, 1193
BmsI GCATC 5 cut(s) 67, 322, 490, 1216, 1302
BpiI GAAGAC 3 cut(s) 653, 875, 1113
BpmI CTGGAG 1 cut(s) 1196
BpuEI CTTGAG 2 cut(s) 643, 900
BpuMI CCSGG 1 cut(s) 735
Bsa29I ATCGAT 1 cut(s) 33
BsaAI YACGTR 1 cut(s) 1115
BsaHI GRCGYC 2 cut(s) 1203, 1514
BsaJI CCNNGG 2 cut(s) 991, 1094
BsaWI WCCGGW 2 cut(s) 851, 1342
BsaXI ACNNNNNCTCC 4 cut(s) 954, 984, 1169, 1199
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 354, 397, 627, 734
Bse118I RCCGGY 1 cut(s) 661
Bse1I ACTGG 4 cut(s) 168, 301, 550, 1355
Bse3DI GCAATG 3 cut(s) 183, 1041, 1158
BseBI CCWGG 2 cut(s) 635, 1193
BseCI ATCGAT 1 cut(s) 33
BseDI CCNNGG 2 cut(s) 991, 1094
BseGI GGATG 6 cut(s) 140, 333, 337, 475, 505, 758
BseLI CCNNNNNNNGG 5 cut(s) 131, 354, 397, 627, 734
BseMI GCAATG 3 cut(s) 183, 1041, 1158
BseMII CTCAG 3 cut(s) 128, 1005, 1288
BseNI ACTGG 4 cut(s) 168, 301, 550, 1355
BseRI GAGGAG 1 cut(s) 1068
BseXI GCAGC 6 cut(s) 432, 760, 952, 1043, 1397, 1406
BseYI CCCAGC 1 cut(s) 627
BshFI GGCC 6 cut(s) 245, 300, 564, 727, 899, 1354
BshNI GGYRCC 1 cut(s) 1289
BshVI ATCGAT 1 cut(s) 33
BsiHKCI CYCGRG 2 cut(s) 376, 1164
BsiSI CCGG 4 cut(s) 662, 735, 852, 1343
BslFI GGGAC 1 cut(s) 644
BslI CCNNNNNNNGG 5 cut(s) 131, 354, 397, 627, 734
BsmAI GTCTC 5 cut(s) 263, 352, 978, 1158, 1361
BsmFI GGGAC 1 cut(s) 644
BsnI GGCC 6 cut(s) 245, 300, 564, 727, 899, 1354
BsoBI CYCGRG 2 cut(s) 376, 1164
BspACI CCGC 5 cut(s) 408, 549, 561, 1479, 1529
BspANI GGCC 6 cut(s) 245, 300, 564, 727, 899, 1354
BspCNI CTCAG 3 cut(s) 127, 1006, 1287
BspDI ATCGAT 1 cut(s) 33
BspHI TCATGA 1 cut(s) 606
BspLI GGNNCC 4 cut(s) 43, 632, 1243, 1291
BspMAI CTGCAG 1 cut(s) 356
BspMI ACCTGC 1 cut(s) 1220
BspPI GGATC 3 cut(s) 34, 143, 381
BspT107I GGYRCC 1 cut(s) 1289
BsrDI GCAATG 3 cut(s) 183, 1041, 1158
BsrFI RCCGGY 1 cut(s) 661
BsrI ACTGG 4 cut(s) 168, 301, 550, 1355
BssAI RCCGGY 1 cut(s) 661
BssECI CCNNGG 2 cut(s) 991, 1094
BssNI GRCGYC 2 cut(s) 1203, 1514
BssSI CACGAG 1 cut(s) 1135
BssT1I CCWWGG 2 cut(s) 991, 1094
Bst2BI CACGAG 1 cut(s) 1135
Bst2UI CCWGG 2 cut(s) 635, 1193
Bst4CI ACNGT 2 cut(s) 233, 277
Bst6I CTCTTC 1 cut(s) 806
BstACI GRCGYC 2 cut(s) 1203, 1514
BstAPI GCANNNNNTGC 2 cut(s) 965, 1391
BstBAI YACGTR 1 cut(s) 1115
BstC8I GCNNGC 6 cut(s) 413, 725, 771, 789, 793, 1071
BstDEI CTNAG 4 cut(s) 114, 980, 1014, 1274
BstF5I GGATG 6 cut(s) 140, 333, 337, 475, 505, 758
BstH2I RGCGCY 1 cut(s) 1011
BstHHI GCGC 1 cut(s) 1010
BstMAI GTCTC 5 cut(s) 263, 352, 978, 1158, 1361
BstMWI GCNNNNNNNGC 8 cut(s) 351, 451, 801, 965, 1382, 1391, 1394, 1403
BstNI CCWGG 2 cut(s) 635, 1193
BstNSI RCATGY 2 cut(s) 773, 1186
BstSCI CCNGG 3 cut(s) 633, 733, 1191
BstSFI CTRYAG 2 cut(s) 352, 1047
BstV1I GCAGC 6 cut(s) 432, 760, 952, 1043, 1397, 1406
BstV2I GAAGAC 3 cut(s) 653, 875, 1113
BstX2I RGATCY 2 cut(s) 386, 711
BstYI RGATCY 2 cut(s) 386, 711
Bsu15I ATCGAT 1 cut(s) 33
BsuRI GGCC 6 cut(s) 245, 300, 564, 727, 899, 1354
BsuTUI ATCGAT 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 791
BtsCI GGATG 6 cut(s) 140, 333, 337, 475, 505, 758
BtsI GCAGTG 1 cut(s) 207
BtsIMutI CAGTG 5 cut(s) 207, 294, 573, 980, 1362
BveI ACCTGC 1 cut(s) 1220
Cac8I GCNNGC 6 cut(s) 413, 725, 771, 789, 793, 1071
CaiI CAGNNNCTG 1 cut(s) 965
CciI TCATGA 1 cut(s) 606
CfoI GCGC 1 cut(s) 1010
Cfr10I RCCGGY 1 cut(s) 661
Cfr13I GGNCC 2 cut(s) 631, 911
ClaI ATCGAT 1 cut(s) 33
CseI GACGC 3 cut(s) 491, 1118, 1503
Csp6I GTAC 3 cut(s) 339, 816, 1060
CviQI GTAC 3 cut(s) 339, 816, 1060
DdeI CTNAG 4 cut(s) 114, 980, 1014, 1274
DraIII CACNNNGTG 1 cut(s) 1118
DriI GACNNNNNGTC 1 cut(s) 224
Eam1104I CTCTTC 1 cut(s) 806
Eam1105I GACNNNNNGTC 1 cut(s) 224
EarI CTCTTC 1 cut(s) 806
Eco130I CCWWGG 2 cut(s) 991, 1094
Eco47I GGWCC 2 cut(s) 631, 911
Eco72I CACGTG 1 cut(s) 1115
Eco88I CYCGRG 2 cut(s) 376, 1164
EcoRII CCWGG 2 cut(s) 633, 1191
EcoT14I CCWWGG 2 cut(s) 991, 1094
EcoT22I ATGCAT 1 cut(s) 937
ErhI CCWWGG 2 cut(s) 991, 1094
FalI AAGNNNNNCTT 2 cut(s) 1191, 1223
FaqI GGGAC 1 cut(s) 644
FauI CCCGC 1 cut(s) 1486
FbaI TGATCA 1 cut(s) 763
FblI GTMKAC 1 cut(s) 228
Fnu4HI GCNGC 8 cut(s) 409, 446, 562, 774, 966, 1032, 1386, 1395
FokI GGATG 6 cut(s) 147, 340, 344, 482, 512, 765
Fsp4HI GCNGC 8 cut(s) 409, 446, 562, 774, 966, 1032, 1386, 1395
FspBI CTAG 1 cut(s) 362
GlaI GCGC 1 cut(s) 1009
GluI GCNGC 8 cut(s) 409, 446, 562, 774, 966, 1032, 1386, 1395
GsaI CCCAGC 1 cut(s) 631
GsuI CTGGAG 1 cut(s) 1196
HaeII RGCGCY 1 cut(s) 1011
HaeIII GGCC 6 cut(s) 245, 300, 564, 727, 899, 1354
HapII CCGG 4 cut(s) 662, 735, 852, 1343
HgaI GACGC 3 cut(s) 491, 1118, 1503
HhaI GCGC 1 cut(s) 1010
Hin1I GRCGYC 2 cut(s) 1203, 1514
Hin6I GCGC 1 cut(s) 1008
HinP1I GCGC 1 cut(s) 1008
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HindIII AAGCTT 1 cut(s) 789
HinfI GANTC 9 cut(s) 57, 401, 1043, 1131, 1211, 1318, 1413, 1439, 1494
HpaII CCGG 4 cut(s) 662, 735, 852, 1343
HphI GGTGA 6 cut(s) 574, 773, 1135, 1207, 1244, 1360
Hpy166II GTNNAC 5 cut(s) 111, 229, 1060, 1143, 1360
Hpy188I TCNGA 8 cut(s) 264, 697, 888, 1015, 1277, 1311, 1332, 1475
Hpy8I GTNNAC 5 cut(s) 111, 229, 1060, 1143, 1360
Hpy99I CGWCG 2 cut(s) 230, 233
HpyAV CCTTC 7 cut(s) 235, 311, 575, 1316, 1414, 1444, 1484
HpyCH4III ACNGT 2 cut(s) 233, 277
HpyCH4IV ACGT 4 cut(s) 225, 893, 1114, 1203
HpyF10VI GCNNNNNNNGC 8 cut(s) 351, 451, 801, 965, 1382, 1391, 1394, 1403
HpyF3I CTNAG 4 cut(s) 114, 980, 1014, 1274
HpySE526I ACGT 4 cut(s) 225, 893, 1114, 1203
Hsp92I GRCGYC 2 cut(s) 1203, 1514
HspAI GCGC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 763
LmnI GCTCC 5 cut(s) 285, 350, 962, 1096, 1382
Lsp1109I GCAGC 6 cut(s) 432, 760, 952, 1043, 1397, 1406
LweI GCATC 5 cut(s) 67, 322, 490, 1216, 1302
MaeI CTAG 1 cut(s) 362
MaeII ACGT 4 cut(s) 225, 893, 1114, 1203
MaeIII GTNAC 2 cut(s) 571, 580
MflI RGATCY 2 cut(s) 386, 711
MluCI AATT 1 cut(s) 691
MlyI GAGTC 3 cut(s) 410, 1205, 1448
Mph1103I ATGCAT 1 cut(s) 937
MseI TTAA 1 cut(s) 1248
MspA1I CMGCKG 1 cut(s) 1397
MspI CCGG 4 cut(s) 662, 735, 852, 1343
MspR9I CCNGG 3 cut(s) 635, 735, 1193
MvaI CCWGG 2 cut(s) 635, 1193
MwoI GCNNNNNNNGC 8 cut(s) 351, 451, 801, 965, 1382, 1391, 1394, 1403
NciI CCSGG 1 cut(s) 735
NlaIV GGNNCC 4 cut(s) 43, 632, 1243, 1291
NmuCI GTSAC 2 cut(s) 571, 580
NsiI ATGCAT 1 cut(s) 937
NspI RCATGY 2 cut(s) 773, 1186
PaeI GCATGC 1 cut(s) 773
PagI TCATGA 1 cut(s) 606
PaqCI CACCTGC 1 cut(s) 1220
PfeI GAWTC 6 cut(s) 57, 1043, 1131, 1318, 1413, 1494
PflMI CCANNNNNTGG 1 cut(s) 397
PkrI GCNGC 8 cut(s) 410, 447, 563, 775, 967, 1033, 1387, 1396
PleI GAGTC 3 cut(s) 409, 1205, 1447
PmaCI CACGTG 1 cut(s) 1115
PmlI CACGTG 1 cut(s) 1115
PpsI GAGTC 3 cut(s) 409, 1205, 1447
Ppu21I YACGTR 1 cut(s) 1115
Psp6I CCWGG 2 cut(s) 633, 1191
PspCI CACGTG 1 cut(s) 1115
PspFI CCCAGC 1 cut(s) 627
PspGI CCWGG 2 cut(s) 633, 1191
PspN4I GGNNCC 4 cut(s) 43, 632, 1243, 1291
PspPI GGNCC 2 cut(s) 631, 911
PstI CTGCAG 1 cut(s) 356
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 2 cut(s) 386, 711
PvuII CAGCTG 1 cut(s) 1397
RsaI GTAC 3 cut(s) 340, 817, 1061
RsaNI GTAC 3 cut(s) 339, 816, 1060
SalI GTCGAC 1 cut(s) 227
SaqAI TTAA 1 cut(s) 1248
SatI GCNGC 8 cut(s) 409, 446, 562, 774, 966, 1032, 1386, 1395
Sau96I GGNCC 2 cut(s) 631, 911
ScaI AGTACT 1 cut(s) 817
SchI GAGTC 3 cut(s) 410, 1205, 1448
ScrFI CCNGG 3 cut(s) 635, 735, 1193
SfaNI GCATC 5 cut(s) 67, 322, 490, 1216, 1302
SfcI CTRYAG 2 cut(s) 352, 1047
SgrDI CGTCGACG 1 cut(s) 227
SinI GGWCC 2 cut(s) 631, 911
SmlI CTYRAG 2 cut(s) 622, 915
SmoI CTYRAG 2 cut(s) 622, 915
SphI GCATGC 1 cut(s) 773
Sse9I AATT 1 cut(s) 691
SsiI CCGC 5 cut(s) 408, 549, 561, 1479, 1529
SspMI CTAG 1 cut(s) 362
StyD4I CCNGG 3 cut(s) 633, 733, 1191
StyI CCWWGG 2 cut(s) 991, 1094
TaaI ACNGT 2 cut(s) 233, 277
TaiI ACGT 4 cut(s) 228, 896, 1117, 1206
TaqI TCGA 8 cut(s) 33, 105, 198, 228, 519, 947, 1020, 1437
TaqII GACCGA 1 cut(s) 899
TasI AATT 1 cut(s) 691
TatI WGTACW 2 cut(s) 815, 1059
TauI GCSGC 2 cut(s) 411, 564
TfiI GAWTC 6 cut(s) 57, 1043, 1131, 1318, 1413, 1494
Tru1I TTAA 1 cut(s) 1248
Tru9I TTAA 1 cut(s) 1248
TscAI CASTG 5 cut(s) 214, 301, 580, 980, 1362
TseFI GTSAC 2 cut(s) 571, 580
TseI GCWGC 6 cut(s) 445, 773, 965, 1031, 1385, 1394
Tsp45I GTSAC 2 cut(s) 571, 580
TspDTI ATGAA 6 cut(s) 49, 455, 557, 623, 826, 1232
TspGWI ACGGA 1 cut(s) 610
TspRI CASTG 5 cut(s) 214, 301, 580, 980, 1362
Van91I CCANNNNNTGG 1 cut(s) 397
VpaK11BI GGWCC 2 cut(s) 631, 911
XceI RCATGY 2 cut(s) 773, 1186
XmiI GTMKAC 1 cut(s) 228
XspI CTAG 1 cut(s) 362
ZraI GACGTC 1 cut(s) 1204
ZrmI AGTACT 1 cut(s) 817
Zsp2I ATGCAT 1 cut(s) 937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.